Pregenerated sensors for LINC00997 (Homo sapiens)

Ensembl gene IDs: ENSG00000281332

Ensembl transcript IDs: ENST00000628855.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TTTCTCCCTTTTCTCCTGTCTTATAAAATAGGGAATAGGAGAGGTTaGGGAGAAACTGAGAAGGACAATAGGAGAAGTGGTGACCTCATA	+
Preference number: 5 (lower is better) Translates to: FLPFLLSYKIGNRRG*GETEKDNRRSGDLI Trigger: TATGAGGTCACCACTTCTCCTATTGTCCTTCTCAGTTTCTCCCCAACCTCTCCTATTCCCTATTTTATAAGACAGGAGAAAAGGGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628855.1
CDS CCA 72 bp	AATATTATTATTATTTTAGCCACCAGGGCCAGGTGGTaGTGCCAAGGTCCTCCAGCTATTTATCTTACTTCT	+
Preference number: 6 (lower is better) Translates to: NIIIILATRARW*CQGPPAIYLTS Trigger: AGAAGTAAGATAAATAGCTGGAGGACCTTGGCACCACCACCTGGCCCTGGTGGCTAAAATAATAATAATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628855.1
CDS CCA 72 bp	AATAATATTATTATTATTTTAGCCACCAGGGCCAGGTaGTGGTGCCAAGGTCCTCCAGCTATTTATCTTACT	+
Preference number: 6 (lower is better) Translates to: NNIIIILATRAR*WCQGPPAIYLT Trigger: AGTAAGATAAATAGCTGGAGGACCTTGGCACCACCACCTGGCCCTGGTGGCTAAAATAATAATAATATTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628855.1

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