Pregenerated sensors for LINC00994 (Homo sapiens)
Ensembl gene IDs: ENSG00000189196Ensembl transcript IDs: ENST00000485805.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GACTCCTCCAGCTTCTGTTGGCTTCTGGCATCCCTTGGCTCTGGCTaGGTAACTCCAATAGCTGCCTCGTCTTCTGATGGCCTTCCCCTC | + |
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Preference number: 5 (lower is better) Translates to: DSSSFCWLLASLGSG*VTPIAASSSDGLPL Trigger: GAGGGGAAGGCCATCAGAAGACGAGGCAGCTATTGGAGTTACGCAGCCAGAGCCAAGGGATGCCAGAAGCCAACAGAAGCTGGAGGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS GCA 90 bp | AGGGCTTGCTATGTGCTGACCTTGTGTCCCAGGCTCCACCCCTGCTaGTTGTTCCAACGTCTTGCTCTCTGTCTTCCTCCAATCCGATCA | + |
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Preference number: 5 (lower is better) Translates to: RACYVLTLCPRLHPC*LFQRLALCLPPIRS Trigger: TGATCGGATTGGAGGAAGACAGAGAGCAAGACGTTGGAACAAGCAGCAGGGGTGGAGCCTGGGACACAAGGTCAGCACATAGCAAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS TCA 90 bp | CCACCTGCCATGATGTCACCAGCTGGGTGGAATTCATACAGTCCATaGAGTAATAGGAAGAAGACCTCTGTGGTCCCTGCAGCCCGGGAG | + |
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Preference number: 5 (lower is better) Translates to: PPAMMSPAGWNSYSP*SNRKKTSVVPAARE Trigger: CTCCCGGGCTGCAGGGACCACAGAGGTCTTCTTCCTATTACTTCATGGACTGTATGAATTCCACCCAGCTGGTGACATCATGGCAGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS GCA 90 bp | CAATTACTGCCTCAAATACTCACTGCCCTGGAAACCGGCCACCTCTaGTCCAAAGCAAGGGCTTGCTATGTGCTGACCTTGTGTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: QLLPQILTALETGHL*SKARACYVLTLCPR Trigger: CCTGGGACACAAGGTCAGCACATAGCAAGCCCTTGCTTTGGAGCAGAGGTGGCCGGTTTCCAGGGCAGTGAGTATTTGAGGCAGTAATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS GCA 90 bp | GCATTGGCAGGAGAGGGGTCATTAGCAGCTACGCATTTGTCCTGCTaGCCTTCTGAGTGTTGCTCAATGCTTAGATACTGCTCCGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: ALAGEGSLAATHLSC*PSECCSMLRYCSVW Trigger: CCACACGGAGCAGTATCTAAGCATTGAGCAACACTCAGAAGGGCAGCAGGACAAATGCGTAGCTGCTAATGACCCCTCTCCTGCCAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS GCA 90 bp | GGGTCATTAGCAGCTACGCATTTGTCCTGCTGCCCTTCTGAGTGTTaGTCAATGCTTAGATACTGCTCCGTGTGGTCTCACGCAGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: GSLAATHLSCCPSEC*SMLRYCSVWSHAVL Trigger: AAGCACTGCGTGAGACCACACGGAGCAGTATCTAAGCATTGAGCAACACTCAGAAGGGCAGCAGGACAAATGCGTAGCTGCTAATGACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS GCA 90 bp | GCACCAGTGAAGCTGAAGATCACAATTACTGCCTCAAATACTCACTaGCCTGGAAACCGGCCACCTCTGCTCCAAAGCAAGGGCTTGCTA | + |
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Preference number: 5 (lower is better) Translates to: APVKLKITITASNTH*PGNRPPLLQSKGLL Trigger: TAGCAAGCCCTTGCTTTGGAGCAGAGGTGGCCGGTTTCCAGGGCAGTGAGTATTTGAGGCAGTAATTGTGATCTTCAGCTTCACTGGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS GCA 90 bp | AAAGCATTGGCAGGAGAGGGGTCATTAGCAGCTACGCATTTGTCCTaGTGCCCTTCTGAGTGTTGCTCAATGCTTAGATACTGCTCCGTG | + |
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Preference number: 5 (lower is better) Translates to: KALAGEGSLAATHLS*CPSECCSMLRYCSV Trigger: CACGGAGCAGTATCTAAGCATTGAGCAACACTCAGAAGGGCAGCAGGACAAATGCGTAGCTGCTAATGACCCCTCTCCTGCCAATGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS GCA 90 bp | CTCACAGGTGATACTTGCACCAGTGAAGCTGAAGATCACAATTACTaGCTCAAATACTCACTGCCCTGGAAACCGGCCACCTCTGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: LTGDTCTSEAEDHNY*LKYSLPWKPATSAP Trigger: TGGAGCAGAGGTGGCCGGTTTCCAGGGCAGTGAGTATTTGAGGCAGTAATTGTGATCTTCAGCTTCACTGGTGCAAGTATCACCTGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS TCA 90 bp | GACATATATCTCCTGGGTGAGGTTGGGTGTACTCAAAATACTGGCTaGGCATTTGAGAGGCCACAGAGGTGCAAAGGCAGAACTGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: DIYLLGEVGCTQNTG*AFERPQRCKGRTGD Trigger: GTCTCCAGTTCTGCCTTTGCACCTCTGTGGCCTCTCAAATGCTCAGCCAGTATTTTGAGTACACCCAACCTCACCCAGGAGATATATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS TCA 90 bp | GTGTACAAACGTTATCACTCCACACTGATGTTGACTCCTTGTCCCTaGCTGCTCAAATTAGCCCCTGTCCCTCCCTCACCCCATATGCTA | + |
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Preference number: 5 (lower is better) Translates to: VYKRYHSTLMLTPCP*LLKLAPVPPSPHML Trigger: TAGCATATGGGGTGAGGGAGGGACAGGGGCTAATTTGAGCAGTCAGGGACAAGGAGTCAACATCAGTGTGGAGTGATAACGTTTGTACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS TCA 90 bp | TACCACCACCAGTCATTGAATTTAGAGCCCACACTGAATCCAGGATaGTCTCGTCTGGAGATGCTTAACTTAATACATTTGCAAAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: YHHQSLNLEPTLNPG*SRLEMLNLIHLQRL Trigger: GAGCCTTTGCAAATGTATTAAGTTAAGCATCTCCAGACGAGATCATCCTGGATTCAGTGTGGGCTCTAAATTCAATGACTGGTGGTGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS TCA 90 bp | GACAAGCTGGCATTCACATGCAGGGTAGTGACTGGGCAGCAATGGTaGGAGAGAATTTTTAAATGTCTGCTATGCATTAAGAATTTACCT | + |
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Preference number: 5 (lower is better) Translates to: DKLAFTCRVVTGQQW*ERIFKCLLCIKNLP Trigger: AGGTAAATTCTTAATGCATAGCAGACATTTAAAAATTCTCTCTCACCATTGCTGCCCAGTCACTACCCTGCATGTGAATGCCAGCTTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS GCA 72 bp | CTGGAAACCGGCCACCTCTGCTCCAAAGCAAGGGCTTaGTATGTGCTGACCTTGTGTCCCAGGCTCCACCCC | + |
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Preference number: 6 (lower is better) Translates to: LETGHLCSKARA*YVLTLCPRLHP Trigger: GGGGTGGAGCCTGGGACACAAGGTCAGCACATAGCAAGCCCTTGCTTTGGAGCAGAGGTGGCCGGTTTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CAA 72 bp | CCTGGAAACCGGCCACCTCTGCTCCAAAGCAAGGGCTaGCTATGTGCTGACCTTGTGTCCCAGGCTCCACCC | + |
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Preference number: 6 (lower is better) Translates to: PGNRPPLLQSKG*LCADLVSQAPP Trigger: GGGTGGAGCCTGGGACACAAGGTCAGCACATAGCAAGCCCTTGCTTTGGAGCAGAGGTGGCCGGTTTCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CAA 90 bp | ACTCACTGCCCTGGAAACCGGCCACCTCTGCTCCAAAGCAAGGGCTaGCTATGTGCTGACCTTGTGTCCCAGGCTCCACCCCTGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: THCPGNRPPLLQSKG*LCADLVSQAPPLLL Trigger: AAGCAGCAGGGGTGGAGCCTGGGACACAAGGTCAGCACATAGCAAGCCCTTGCTTTGGAGCAGAGGTGGCCGGTTTCCAGGGCAGTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CAA 90 bp | ACCGGCCACCTCTGCTCCAAAGCAAGGGCTTGCTATGTGCTGACCTaGTGTCCCAGGCTCCACCCCTGCTGCTTGTTCCAACGTCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: TGHLCSKARACYVLT*CPRLHPCCLFQRLA Trigger: AGCAAGACGTTGGAACAAGCAGCAGGGGTGGAGCCTGGGACACAAGGTCAGCACATAGCAAGCCCTTGCTTTGGAGCAGAGGTGGCCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CAA 72 bp | ACCTCCCTCCATCCCAGCTCCTTGAGGGTGGTCAGCTaGTATTTACAGCTGTTCGGTGACCCTAGAGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: TSLHPSSLRVVS*YLQLFGDPRGG Trigger: GCCCCCTCTAGGGTCACCGAACAGCTGTAAATACAAGCTGACCACCCTCAAGGAGCTGGGATGGAGGGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CAA 72 bp | GTGCTGACCTTGTGTCCCAGGCTCCACCCCTGCTGCTaGTTCCAACGTCTTGCTCTCTGTCTTCCTCCAATC | + |
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Preference number: 6 (lower is better) Translates to: VLTLCPRLHPCC*FQRLALCLPPI Trigger: GATTGGAGGAAGACAGAGAGCAAGACGTTGGAACAAGCAGCAGGGGTGGAGCCTGGGACACAAGGTCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CAA 72 bp | CTCTGCTCCAAAGCAAGGGCTTGCTATGTGCTGACCTaGTGTCCCAGGCTCCACCCCTGCTGCTTGTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LCSKARACYVLT*CPRLHPCCLFQ Trigger: TTGGAACAAGCAGCAGGGGTGGAGCCTGGGACACAAGGTCAGCACATAGCAAGCCCTTGCTTTGGAGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS TCA 72 bp | CTCTGGCTGCGTAACTCCAATAGCTGCCTCGTCTTCTaGTGGCCTTCCCCTCTGTGTGTCTCTGGGTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: LWLRNSNSCLVF*WPSPLCVSGSV Trigger: AACAGACCCAGAGACACACAGAGGGGAAGGCCATCAGAAGACGAGGCAGCTATTGGAGTTACGCAGCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS GCA 72 bp | TCCCAGGCTCCACCCCTGCTGCTTGTTCCAACGTCTTaGTCTCTGTCTTCCTCCAATCCGATCATGTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SQAPPLLLVPTS*SLSSSNPIMCL Trigger: CAAGCACATGATCGGATTGGAGGAAGACAGAGAGCAAGACGTTGGAACAAGCAGCAGGGGTGGAGCCTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS GCA 72 bp | TATGTGCTGACCTTGTGTCCCAGGCTCCACCCCTGCTaGTTGTTCCAACGTCTTGCTCTCTGTCTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: YVLTLCPRLHPC*LFQRLALCLPP Trigger: TGGAGGAAGACAGAGAGCAAGACGTTGGAACAAGCAGCAGGGGTGGAGCCTGGGACACAAGGTCAGCACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS GCA 72 bp | CCTCAAATACTCACTGCCCTGGAAACCGGCCACCTCTaGTCCAAAGCAAGGGCTTGCTATGTGCTGACCTTG | + |
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Preference number: 6 (lower is better) Translates to: PQILTALETGHL*SKARACYVLTL Trigger: CAAGGTCAGCACATAGCAAGCCCTTGCTTTGGAGCAGAGGTGGCCGGTTTCCAGGGCAGTGAGTATTTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CAA 72 bp | GTCCCAGGCTCCACCCCTGCTGCTTGTTCCAACGTCTaGCTCTCTGTCTTCCTCCAATCCGATCATGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: VPGSTPAACSNV*LSVFLQSDHVL Trigger: AAGCACATGATCGGATTGGAGGAAGACAGAGAGCAAGACGTTGGAACAAGCAGCAGGGGTGGAGCCTGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CAA 90 bp | GCTTGCTATGTGCTGACCTTGTGTCCCAGGCTCCACCCCTGCTGCTaGTTCCAACGTCTTGCTCTCTGTCTTCCTCCAATCCGATCATGT | + |
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Preference number: 6 (lower is better) Translates to: ACYVLTLCPRLHPCC*FQRLALCLPPIRSC Trigger: ACATGATCGGATTGGAGGAAGACAGAGAGCAAGACGTTGGAACAAGCAGCAGGGGTGGAGCCTGGGACACAAGGTCAGCACATAGCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS TCA 72 bp | GGAGACTGGAGAAAACCTCCCTCCATCCCAGCTCCTTaGGGGTGGTCAGCTTGTATTTACAGCTGTTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: GDWRKPPSIPAP*GWSACIYSCSV Trigger: CACCGAACAGCTGTAAATACAAGCTGACCACCCTCAAGGAGCTGGGATGGAGGGAGGTTTTCTCCAGTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS GCA 72 bp | CGCATTTGTCCTGCTGCCCTTCTGAGTGTTGCTCAATaGTTAGATACTGCTCCGTGTGGTCTCACGCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: RICPAALLSVAQ*LDTAPCGLTQC Trigger: GCACTGCGTGAGACCACACGGAGCAGTATCTAAGCATTGAGCAACACTCAGAAGGGCAGCAGGACAAATGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS TCA 72 bp | CTCCTGGGTGAGGTTGGGTGTACTCAAAATACTGGCTaGGCATTTGAGAGGCCACAGAGGTGCAAAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LLGEVGCTQNTG*AFERPQRCKGR Trigger: TCTGCCTTTGCACCTCTGTGGCCTCTCAAATGCTCAGCCAGTATTTTGAGTACACCCAACCTCACCCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS GCA 72 bp | GCAGCTACGCATTTGTCCTGCTGCCCTTCTGAGTGTTaGTCAATGCTTAGATACTGCTCCGTGTGGTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: AATHLSCCPSEC*SMLRYCSVWSH Trigger: GTGAGACCACACGGAGCAGTATCTAAGCATTGAGCAACACTCAGAAGGGCAGCAGGACAAATGCGTAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CAA 72 bp | GCATTGGCAGGAGAGGGGTCATTAGCAGCTACGCATTaGTCCTGCTGCCCTTCTGAGTGTTGCTCAATGCTT | + |
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Preference number: 6 (lower is better) Translates to: ALAGEGSLAATH*SCCPSECCSML Trigger: AAGCATTGAGCAACACTCAGAAGGGCAGCAGGACAAATGCGTAGCTGCTAATGACCCCTCTCCTGCCAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CAA 90 bp | GGGAGGAAAGCATTGGCAGGAGAGGGGTCATTAGCAGCTACGCATTaGTCCTGCTGCCCTTCTGAGTGTTGCTCAATGCTTAGATACTGC | + |
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Preference number: 6 (lower is better) Translates to: GRKALAGEGSLAATH*SCCPSECCSMLRYC Trigger: GCAGTATCTAAGCATTGAGCAACACTCAGAAGGGCAGCAGGACAAATGCGTAGCTGCTAATGACCCCTCTCCTGCCAATGCTTTCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CAA 90 bp | CAGCTTGGTGTACAAACGTTATCACTCCACACTGATGTTGACTCCTaGTCCCTGACTGCTCAAATTAGCCCCTGTCCCTCCCTCACCCCA | + |
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Preference number: 6 (lower is better) Translates to: QLGVQTLSLHTDVDS*SLTAQISPCPSLTP Trigger: TGGGGTGAGGGAGGGACAGGGGCTAATTTGAGCAGTCAGGGACAAGGAGTCAACATCAGTGTGGAGTGATAACGTTTGTACACCAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS GCA 72 bp | GGAGAGGGGTCATTAGCAGCTACGCATTTGTCCTGCTaGCCTTCTGAGTGTTGCTCAATGCTTAGATACTGC | + |
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Preference number: 6 (lower is better) Translates to: GEGSLAATHLSC*PSECCSMLRYC Trigger: GCAGTATCTAAGCATTGAGCAACACTCAGAAGGGCAGCAGGACAAATGCGTAGCTGCTAATGACCCCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CCA 72 bp | GAAGATCACAATTACTGCCTCAAATACTCACTGCCCTaGAAACCGGCCACCTCTGCTCCAAAGCAAGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: EDHNYCLKYSLP*KPATSAPKQGL Trigger: AAGCCCTTGCTTTGGAGCAGAGGTGGCCGGTTTCCAGGGCAGTGAGTATTTGAGGCAGTAATTGTGATCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CCA 72 bp | CCTCGTCTTCTGATGGCCTTCCCCTCTGTGTGTCTCTaGGTCTGTTTGTCTCTCTCTCCTTTCTCTTATACC | + |
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Preference number: 6 (lower is better) Translates to: PRLLMAFPSVCL*VCLSLSPFSYT Trigger: GGTATAAGAGAAAGGAGAGAGAGACAAACAGACCCAGAGACACACAGAGGGGAAGGCCATCAGAAGACGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS GCA 72 bp | AAGCTGAAGATCACAATTACTGCCTCAAATACTCACTaGCCTGGAAACCGGCCACCTCTGCTCCAAAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: KLKITITASNTH*PGNRPPLLQSK Trigger: CTTGCTTTGGAGCAGAGGTGGCCGGTTTCCAGGGCAGTGAGTATTTGAGGCAGTAATTGTGATCTTCAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS GCA 72 bp | GATACTTGCACCAGTGAAGCTGAAGATCACAATTACTaGCTCAAATACTCACTGCCCTGGAAACCGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: DTCTSEAEDHNY*LKYSLPWKPAT Trigger: GGTGGCCGGTTTCCAGGGCAGTGAGTATTTGAGGCAGTAATTGTGATCTTCAGCTTCACTGGTGCAAGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CAA 72 bp | GTACAAACGTTATCACTCCACACTGATGTTGACTCCTaGTCCCTGACTGCTCAAATTAGCCCCTGTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VQTLSLHTDVDS*SLTAQISPCPS Trigger: GGAGGGACAGGGGCTAATTTGAGCAGTCAGGGACAAGGAGTCAACATCAGTGTGGAGTGATAACGTTTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS GCA 72 bp | CAATGCTTAGATACTGCTCCGTGTGGTCTCACGCAGTaGTTTGAGCAACACATCGAGGAGGAAGGAAACTTT | + |
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Preference number: 6 (lower is better) Translates to: QCLDTAPCGLTQ*FEQHIEEEGNF Trigger: AAAGTTTCCTTCCTCCTCGATGTGTTGCTCAAAGCACTGCGTGAGACCACACGGAGCAGTATCTAAGCATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CCA 72 bp | TTGAATCTCCCTGGAGCTCACAGATGGGATGCCACATaGATTAGATCCAAAGGCTTGGTAATTTGGTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LNLPGAHRWDAT*IRSKGLVIWSS Trigger: CGAGGACCAAATTACCAAGCCTTTGGATCTAATCCATGTGGCATCCCATCTGTGAGCTCCAGGGAGATTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CAA 90 bp | TATGGAAATGGTATAAATATGATTGGCCTCCAGCACTGGCCAACTTaGAATCTCCCTGGAGCTCACAGATGGGATGCCACATGGATTAGA | + |
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Preference number: 6 (lower is better) Translates to: YGNGINMIGLQHWPT*NLPGAHRWDATWIR Trigger: TCTAATCCATGTGGCATCCCATCTGTGAGCTCCAGGGAGATTCAAAGTTGGCCAGTGCTGGAGGCCAATCATATTTATACCATTTCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CAA 72 bp | TGTTGGGAGCATTTCTCTGGAGACACGGTGACCCTTTaGAAAATACTCAAAAGTTCTGAGCTCCAGTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: CWEHFSGDTVTL*KILKSSELQSE Trigger: CTCAGACTGGAGCTCAGAACTTTTGAGTATTTTCAAAAGGGTCACCGTGTCTCCAGAGAAATGCTCCCAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CAA 90 bp | TGTGACAGAAAAGACCTGTGCTCTAAATGTGTTTGGGGGTGGAAGTaGAGAATAGGAAAGAGACAACTCAAGAGACAAGCTGGCATTCAC | + |
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Preference number: 6 (lower is better) Translates to: CDRKDLCSKCVWGWK*RIGKRQLKRQAGIH Trigger: GTGAATGCCAGCTTGTCTCTTGAGTTGTCTCTTTCCTATTCTCAACTTCCACCCCCAAACACATTTAGAGCACAGGTCTTTTCTGTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CCA 72 bp | CTTGCCAAGTCTCAATCAAAAGGTGCCATATGGAAATaGTATAAATATGATTGGCCTCCAGCACTGGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: LAKSQSKGAIWK*YKYDWPPALAN Trigger: GTTGGCCAGTGCTGGAGGCCAATCATATTTATACCATTTCCATATGGCACCTTTTGATTGAGACTTGGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS CCA 72 bp | CATGTGCTTGCCAAGTCTCAATCAAAAGGTGCCATATaGAAATGGTATAAATATGATTGGCCTCCAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: HVLAKSQSKGAI*KWYKYDWPPAL Trigger: CAGTGCTGGAGGCCAATCATATTTATACCATTTCCATATGGCACCTTTTGATTGAGACTTGGCAAGCACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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| CDS TCA 72 bp | CAGTCATTGAATTTAGAGCCCACACTGAATCCAGGATaGTCTCGTCTGGAGATGCTTAACTTAATACATTTG | + |
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Preference number: 6 (lower is better) Translates to: QSLNLEPTLNPG*SRLEMLNLIHL Trigger: CAAATGTATTAAGTTAAGCATCTCCAGACGAGATCATCCTGGATTCAGTGTGGGCTCTAAATTCAATGACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485805.1 |
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