Pregenerated sensors for LINC00989 (Homo sapiens)
Ensembl gene IDs: ENSG00000250334Ensembl transcript IDs: ENST00000508174.6, ENST00000515544.2, ENST00000654276.1, ENST00000654687.1, ENST00000656371.1, ENST00000661529.1, ENST00000661950.1, ENST00000664228.1, ENST00000668018.1, ENST00000670961.1, ENST00000671684.1
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ATACATCGGCCCTGGAGAACAGGGGTCCTTGAGGAGGGCAGCCAGTaGAATTGGGGAAGGTCCACAGGGAGAAGGAGACTTCCAGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: IHRPWRTGVLEEGSQ*NWGRSTGRRRLPAE Trigger: TTCAGCTGGAAGTCTCCTTCTCCCTGTGGACCTTCCCCAATTCCACTGGCTGCCCTCCTCAAGGACCCCTGTTCTCCAGGGCCGATGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654687.1 |
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| CDS TCA 90 bp | ACTCTTAATGGAGGTAAGCCAGGACACCAGCACATGGTCAGAGTCTaGGTGCAGACTGTCTCCTCCAGGACATGGAGAAGCGACACAGGC | + |
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Preference number: 5 (lower is better) Translates to: TLNGGKPGHQHMVRV*VQTVSSRTWRSDTG Trigger: GCCTGTGTCGCTTCTCCATGTCCTGGAGGAGACAGTCTGCACTCAGACTCTGACCATGTGCTGGTGTCCTGGCTTACCTCCATTAAGAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668018.1 |
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| CDS TCA 90 bp | CTGCAGGCACTCTTGTTCCCCAGGGAAGCCAAGGATAGCCATTTCTaGATTTATCTCACAGGGGTCCTTGAGGAGGGCAGCCAGTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: LQALLFPREAKDSHF*IYLTGVLEEGSQWN Trigger: ATTCCACTGGCTGCCCTCCTCAAGGACCCCTGTGAGATAAATTCAGAAATGGCTATCCTTGGCTTCCCTGGGGAACAAGAGTGCCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000508174.6 ENST00000654276.1 ENST00000656371.1 ENST00000661529.1 ENST00000670961.1 |
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| CDS CCA 90 bp | GGTGTTGTAGCAGGCCTGGCCCACAGCATCCTGATGCTTATCACCTaGACAGTTTCCAGCCACAGATTGGTCTTCGAGTTGTTGAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: GVVAGLAHSILMLIT*TVSSHRLVFELLRR Trigger: TCTCCTCAACAACTCGAAGACCAATCTGTGGCTGGAAACTGTCCAGGTGATAAGCATCAGGATGCTGTGGGCCAGGCCTGCTACAACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654276.1 ENST00000656371.1 |
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| CDS CCA 90 bp | GGATCTATTTCTAGAGAACTTGGCCTGGGAAAGCCTGGTGGCCTGTaGAATGTAGCCCTGGAAATCAGCCTCCGGAGTAGAGAACAGAGT | + |
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Preference number: 5 (lower is better) Translates to: GSISRELGLGKPGGL*NVALEISLRSREQS Trigger: ACTCTGTTCTCTACTCCGGAGGCTGATTTCCAGGGCTACATTCCACAGGCCACCAGGCTTTCCCAGGCCAAGTTCTCTAGAAATAGATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS CCA 90 bp | TTGGGAAGAAACCCAGCAGGGAGCGAGTTAAGGGAAATGCCTTCATaGCCTGTTCTAGCTCTCCATTGGCCAAGGTTAGTGGAAGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: LGRNPAGSELREMPS*PVLALHWPRLVEAR Trigger: TCTGGCTTCCACTAACCTTGGCCAATGGAGAGCTAGAACAGGCCATGAAGGCATTTCCCTTAACTCGCTCCCTGCTGGGTTTCTTCCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS CCA 90 bp | TTTTCTGTTCCTCTTCTTCAGTCTGGAACACAGGAGCTGGAAGCCTaGAAGGGCAACAGCCATCTGGTGACCACGATACAATCACAAGGT | + |
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Preference number: 5 (lower is better) Translates to: FSVPLLQSGTQELEA*KGNSHLVTTIQSQG Trigger: ACCTTGTGATTGTATCGTGGTCACCAGATGGCTGTTGCCCTTCCAGGCTTCCAGCTCCTGTGTTCCAGACTGAAGAAGAGGAACAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668018.1 |
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| CDS CCA 90 bp | AGCAGAAATGAACTCTTAATGGAGGTAAGCCAGGACACCAGCACATaGTCAGAGTCTGAGTGCAGACTGTCTCCTCCAGGACATGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: SRNELLMEVSQDTST*SESECRLSPPGHGE Trigger: TTCTCCATGTCCTGGAGGAGACAGTCTGCACTCAGACTCTGACCATGTGCTGGTGTCCTGGCTTACCTCCATTAAGAGTTCATTTCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668018.1 |
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| CDS TCA 90 bp | TGGTGTCCCCCAAGATTGAGTATGGGTTTGTGTCTCCCAGCTCACTaGTTCAAATGTTCATCTCCTTTGGTGACACCCTCACAGACACAC | + |
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Preference number: 5 (lower is better) Translates to: WCPPRLSMGLCLPAH*FKCSSPLVTPSQTH Trigger: GTGTGTCTGTGAGGGTGTCACCAAAGGAGATGAACATTTGAATCAGTGAGCTGGGAGACACAAACCCATACTCAATCTTGGGGGACACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000654276.1 ENST00000654687.1 ENST00000656371.1 ENST00000661529.1 ENST00000661950.1 ENST00000664228.1 ENST00000668018.1 ENST00000670961.1 |
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| CDS CCA 90 bp | TTTTCATTCCATGTCTGCCTCCCTCACTCCCCTGAAGGTTGCTCCTaGGAGCACTCTCTCAATACATCATGTGTACTCAAATACCCACGT | + |
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Preference number: 5 (lower is better) Translates to: FSFHVCLPHSPEGCS*EHSLNTSCVLKYPR Trigger: ACGTGGGTATTTGAGTACACATGATGTATTGAGAGAGTGCTCCCAGGAGCAACCTTCAGGGGAGTGAGGGAGGCAGACATGGAATGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS TCA 90 bp | TTAGAGAGTGAAACAGAAATAGCTAGGTGTCACAGTTCAGGTCAATaGGATGCTGGCAGAAATCTCAAGGGGGACGGTGAGGGGGAATTC | + |
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Preference number: 5 (lower is better) Translates to: LESETEIARCHSSGQ*DAGRNLKGDGEGEF Trigger: GAATTCCCCCTCACCGTCCCCCTTGAGATTTCTGCCAGCATCTCATTGACCTGAACTGTGACACCTAGCTATTTCTGTTTCACTCTCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS CCA 90 bp | AGGAGTACATGGAAGATTCTGACAAACTGGGATACTGTGCAGCTGTaGGAGGCACTGCTTGTTGCCATTTCTAAGTATGCTACTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: RSTWKILTNWDTVQL*EALLVAISKYATPV Trigger: GACTGGAGTAGCATACTTAGAAATGGCAACAAGCAGTGCCTCCCACAGCTGCACAGTATCCCAGTTTGTCAGAATCTTCCATGTACTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS TCA 90 bp | GTTTGTGTCTCCCAGCTCACTGATTCAAATGTTCATCTCCTTTGGTaGCACCCTCACAGACACACCCAGGAACAATACTTTGCATCCTTC | + |
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Preference number: 5 (lower is better) Translates to: VCVSQLTDSNVHLLW*HPHRHTQEQYFASF Trigger: GAAGGATGCAAAGTATTGTTCCTGGGTGTGTCTGTGAGGGTGTCACCAAAGGAGATGAACATTTGAATCAGTGAGCTGGGAGACACAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000654276.1 ENST00000654687.1 ENST00000656371.1 ENST00000661529.1 ENST00000661950.1 ENST00000664228.1 ENST00000668018.1 ENST00000670961.1 |
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| CDS TCA 90 bp | AGCTATATGCTTCCGGGCATTTCCAGAAGGCATCTCACATATGCTTaGAACAGGTCAGTCAGCTCTCAGGTGACAACTACGAGATACAAC | + |
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Preference number: 5 (lower is better) Translates to: SYMLPGISRRHLTYA*NRSVSSQVTTTRYN Trigger: GTTGTATCTCGTAGTTGTCACCTGAGAGCTGACTGACCTGTTTCAAGCATATGTGAGATGCCTTCTGGAAATGCCCGGAAGCATATAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS CCA 90 bp | CTGACTGGAGAGGTGCTGCAAAGTCCCTGTTTCCTTGTCCCACGTTaGAAAAGACTCTGCATCAGAATTTACACTACAGAACTTTCCATG | + |
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Preference number: 5 (lower is better) Translates to: LTGEVLQSPCFLVPR*KRLCIRIYTTELSM Trigger: CATGGAAAGTTCTGTAGTGTAAATTCTGATGCAGAGTCTTTTCCAACGTGGGACAAGGAAACAGGGACTTTGCAGCACCTCTCCAGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS TCA 90 bp | AAAGGAATGAGAGCACTCGTGACCTGTAGTTTTATGGAGCAGAAATaGACTCTTAATGGAGGTAAGCCAGGACACCAGCACATGGTCAGA | + |
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Preference number: 5 (lower is better) Translates to: KGMRALVTCSFMEQK*TLNGGKPGHQHMVR Trigger: TCTGACCATGTGCTGGTGTCCTGGCTTACCTCCATTAAGAGTTCATTTCTGCTCCATAAAACTACAGGTCACGAGTGCTCTCATTCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668018.1 |
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| CDS GCA 90 bp | GTGCTGCAAAGTCCCTGTTTCCTTGTCCCACGTTGGAAAAGACTCTaGATCAGAATTTACACTACAGAACTTTCCATGGGATCATGCCAA | + |
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Preference number: 5 (lower is better) Translates to: VLQSPCFLVPRWKRL*IRIYTTELSMGSCQ Trigger: TTGGCATGATCCCATGGAAAGTTCTGTAGTGTAAATTCTGATGCAGAGTCTTTTCCAACGTGGGACAAGGAAACAGGGACTTTGCAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS CCA 90 bp | TTCCTGGTAACCAGAGACAAAAGATATAAACTTGTGGGAGCTCTATaGCCTCACCTATTACCTGAGACGACTGAATATTTACCCTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: FLVTRDKRYKLVGAL*PHLLPETTEYLPWP Trigger: TGGCCAGGGTAAATATTCAGTCGTCTCAGGTAATAGGTGAGGCCATAGAGCTCCCACAAGTTTATATCTTTTGTCTCTGGTTACCAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664228.1 |
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| CDS TCA 90 bp | GAAAGGAATGTGCTGCTTTTTGCCCTTTATCCCACTTGCTCTTGCTaGAGTTCAACCTTGAAATGCCTCATCCCATTAGCTATATGCTTC | + |
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Preference number: 5 (lower is better) Translates to: ERNVLLFALYPTCSC*SSTLKCLIPLAICF Trigger: GAAGCATATAGCTAATGGGATGAGGCATTTCAAGGTTGAACTTCAGCAAGAGCAAGTGGGATAAAGGGCAAAAAGCAGCACATTCCTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS TCA 90 bp | TTGGTCTTCGAGTTGTTGAGGAGATTGTCAGAGAGATTGATAGTGTaGGCCATACTGGAATTACCCATGATAAATGACACGATTTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LVFELLRRLSERLIV*AILELPMINDTISS Trigger: GGAGGAAATCGTGTCATTTATCATGGGTAATTCCAGTATGGCTCACACTATCAATCTCTCTGACAATCTCCTCAACAACTCGAAGACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654276.1 ENST00000656371.1 |
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| CDS GCA 90 bp | GACTATTCAGCTAAACTTGATGAGTACCTCTTTCCACGTGGAAGTTaGCTAAAAACACATTTACATCCAGACTTGGGTCACCTTTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: DYSAKLDEYLFPRGS*LKTHLHPDLGHLSV Trigger: CACAGAAAGGTGACCCAAGTCTGGATGTAAATGTGTTTTTAGGCAACTTCCACGTGGAAAGAGGTACTCATCAAGTTTAGCTGAATAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654276.1 |
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| CDS GCA 90 bp | GACTATTCAGCTAAACTTGATGAGTACCTCTTTCCACGTGGAAGTTaGCTAAAAACACATTTACATCCAGACTTGGGTCACACAATCACA | + |
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Preference number: 5 (lower is better) Translates to: DYSAKLDEYLFPRGS*LKTHLHPDLGHTIT Trigger: TGTGATTGTGTGACCCAAGTCTGGATGTAAATGTGTTTTTAGGCAACTTCCACGTGGAAAGAGGTACTCATCAAGTTTAGCTGAATAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656371.1 |
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| CDS GCA 90 bp | GAAACCTCTTATACCCAGCTGATCCTAGGTTATTATTCATATATTTaGTCAGTAGCCAGATCCAAGAATTCATCTGGAAACTCTCAAAGG | + |
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Preference number: 5 (lower is better) Translates to: ETSYTQLILGYYSYI*SVARSKNSSGNSQR Trigger: CCTTTGAGAGTTTCCAGATGAATTCTTGGATCTGGCTACTGAGCAAATATATGAATAATAACCTAGGATCAGCTGGGTATAAGAGGTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS GCA 90 bp | AGAAATTTTTCTTGCTCACTCTTTAATGCTCCCCAGAAGGCCCTCTaGTTAATAATCTCACCAGTTTCTTTATATGTCATATATTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: RNFSCSLFNAPQKAL*LIISPVSLYVIYFH Trigger: ATGGAAATATATGACATATAAAGAAACTGGTGAGATTATTAAGCAGAGGGCCTTCTGGGGAGCATTAAAGAGTGAGCAAGAAAAATTTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS CCA 72 bp | CCCTGGAGAACAGGGGTCCTTGAGGAGGGCAGCCAGTaGAATTGGGGAAGGTCCACAGGGAGAAGGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: PWRTGVLEEGSQ*NWGRSTGRRRL Trigger: AAGTCTCCTTCTCCCTGTGGACCTTCCCCAATTCCACTGGCTGCCCTCCTCAAGGACCCCTGTTCTCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654687.1 |
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| CDS TCA 72 bp | TCCAAACATACATCGGCCCTGGAGAACAGGGGTCCTTaGGGAGGGCAGCCAGTGGAATTGGGGAAGGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: SKHTSALENRGP*GGQPVELGKVH Trigger: GTGGACCTTCCCCAATTCCACTGGCTGCCCTCCTCAAGGACCCCTGTTCTCCAGGGCCGATGTATGTTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654687.1 |
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| CDS CCA 72 bp | AGAGGGGGAAATCCATCTCCAAACATACATCGGCCCTaGAGAACAGGGGTCCTTGAGGAGGGCAGCCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: RGGNPSPNIHRP*RTGVLEEGSQW Trigger: CCACTGGCTGCCCTCCTCAAGGACCCCTGTTCTCCAGGGCCGATGTATGTTTGGAGATGGATTTCCCCCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654687.1 |
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| CDS TCA 72 bp | GGAGGTAAGCCAGGACACCAGCACATGGTCAGAGTCTaGGTGCAGACTGTCTCCTCCAGGACATGGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: GGKPGHQHMVRV*VQTVSSRTWRS Trigger: GCTTCTCCATGTCCTGGAGGAGACAGTCTGCACTCAGACTCTGACCATGTGCTGGTGTCCTGGCTTACCTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668018.1 |
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| CDS GCA 72 bp | GGACATGGAGAAGCGACACAGGCTCACTCTTCCCTCTaGAAGAAGGCGCTGAGCATTACTCTGGGAGGATCC | + |
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Preference number: 6 (lower is better) Translates to: GHGEATQAHSSL*KKALSITLGGS Trigger: GGATCCTCCCAGAGTAATGCTCAGCGCCTTCTTGCAGAGGGAAGAGTGAGCCTGTGTCGCTTCTCCATGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668018.1 |
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| CDS TCA 72 bp | TACACCTGCATCCTTCTCAGAAGGCTTGCCCTTAGGTaGCTGAGGTCGCCTTACCTGGAGGTGCCTGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: YTCILLRRLALR*LRSPYLEVPGN Trigger: ATTCCCAGGCACCTCCAGGTAAGGCGACCTCAGTCACCTAAGGGCAAGCCTTCTGAGAAGGATGCAGGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS CCA 72 bp | TCCATTGGCCTGAGACACACCCCATATCCCTCAAAGTaGCCACTGCAAGCCCAAGGAGAGTCTAGGCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: SIGLRHTPYPSK*PLQAQGESRLR Trigger: TCTCAGCCTAGACTCTCCTTGGGCTTGCAGTGGCCACTTTGAGGGATATGGGGTGTGTCTCAGGCCAATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664228.1 |
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| CDS CCA 72 bp | TCTAGAGAACTTGGCCTGGGAAAGCCTGGTGGCCTGTaGAATGTAGCCCTGGAAATCAGCCTCCGGAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: SRELGLGKPGGL*NVALEISLRSR Trigger: TCTACTCCGGAGGCTGATTTCCAGGGCTACATTCCACAGGCCACCAGGCTTTCCCAGGCCAAGTTCTCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS TCA 72 bp | CCTGCATCCTTCTCAGAAGGCTTGCCCTTAGGTGACTaGGGTCGCCTTACCTGGAGGTGCCTGGGAATTATA | + |
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Preference number: 6 (lower is better) Translates to: PASFSEGLPLGD*GRLTWRCLGII Trigger: TATAATTCCCAGGCACCTCCAGGTAAGGCGACCTCAGTCACCTAAGGGCAAGCCTTCTGAGAAGGATGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS CCA 72 bp | ATTTATCTCACAGGGGTCCTTGAGGAGGGCAGCCAGTaGAATTGGGGAAGGTCCACAGGGAGAAGGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: IYLTGVLEEGSQ*NWGRSTGRRRL Trigger: AAGTCTCCTTCTCCCTGTGGACCTTCCCCAATTCCACTGGCTGCCCTCCTCAAGGACCCCTGTGAGATAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000508174.6 ENST00000654276.1 ENST00000656371.1 ENST00000661529.1 ENST00000670961.1 |
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| CDS CCA 72 bp | CCTCTTCTTCAGTCTGGAACACAGGAGCTGGAAGCCTaGAAGGGCAACAGCCATCTGGTGACCACGATCTTT | + |
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Preference number: 6 (lower is better) Translates to: PLLQSGTQELEA*KGNSHLVTTIF Trigger: AAAGATCGTGGTCACCAGATGGCTGTTGCCCTTCCAGGCTTCCAGCTCCTGTGTTCCAGACTGAAGAAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS CCA 72 bp | CCTCTTCTTCAGTCTGGAACACAGGAGCTGGAAGCCTaGAAGGGCAACAGCCATCTGGTGACCACGATACAA | + |
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Preference number: 6 (lower is better) Translates to: PLLQSGTQELEA*KGNSHLVTTIQ Trigger: TTGTATCGTGGTCACCAGATGGCTGTTGCCCTTCCAGGCTTCCAGCTCCTGTGTTCCAGACTGAAGAAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668018.1 |
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| CDS CAA 90 bp | GGGAAGCCAAGGATAGCCATTTCTGAATTTATCTCACAGGGGTCCTaGAGGAGGGCAGCCAGTGGAATTGGGGAAGGTCCACAGGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: GKPRIAISEFISQGS*RRAASGIGEGPQGE Trigger: TTCTCCCTGTGGACCTTCCCCAATTCCACTGGCTGCCCTCCTCAAGGACCCCTGTGAGATAAATTCAGAAATGGCTATCCTTGGCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000508174.6 ENST00000654276.1 ENST00000656371.1 ENST00000661529.1 ENST00000670961.1 |
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| CDS TCA 72 bp | CTCTTGTTCCCCAGGGAAGCCAAGGATAGCCATTTCTaGATTTATCTCACAGGGGTCCTTGAGGAGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LLFPREAKDSHF*IYLTGVLEEGS Trigger: GCTGCCCTCCTCAAGGACCCCTGTGAGATAAATTCAGAAATGGCTATCCTTGGCTTCCCTGGGGAACAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000508174.6 ENST00000654276.1 ENST00000656371.1 ENST00000661529.1 ENST00000670961.1 |
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| CDS GCA 72 bp | GCAAGGAAGCCAGTCCAAGTCCCAAAACTTCAAAAGTaGAGCCTTCCGTCTGTGGCCAAAGGTCCAAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: ARKPVQVPKLQK*SLPSVAKGPRV Trigger: GACTCTTGGACCTTTGGCCACAGACGGAAGGCTGCACTTTTGAAGTTTTGGGACTTGGACTGGCTTCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000654276.1 ENST00000654687.1 ENST00000656371.1 ENST00000661529.1 ENST00000661950.1 ENST00000664228.1 ENST00000668018.1 ENST00000670961.1 |
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| CDS CCA 72 bp | AACCCAGCAGGGAGCGAGTTAAGGGAAATGCCTTCATaGCCTGTTCTAGCTCTCCATTGGCCAAGGTTAGTG | + |
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Preference number: 6 (lower is better) Translates to: NPAGSELREMPS*PVLALHWPRLV Trigger: CACTAACCTTGGCCAATGGAGAGCTAGAACAGGCCATGAAGGCATTTCCCTTAACTCGCTCCCTGCTGGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS TCA 72 bp | AGCCATAATCTCCCATGGAACATAACTCCATTGGCCTaGGACACACCCCATATCCCTCAAAGTGGCCACTGC | + |
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Preference number: 6 (lower is better) Translates to: SHNLPWNITPLA*DTPHIPQSGHC Trigger: GCAGTGGCCACTTTGAGGGATATGGGGTGTGTCTCAGGCCAATGGAGTTATGTTCCATGGGAGATTATGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664228.1 |
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| CDS GCA 72 bp | TCATTCCATGTCTGCCTCCCTCACTCCCCTGAAGGTTaGTCCTGGGAGCACTCTCTCAATACATCATGTGTA | + |
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Preference number: 6 (lower is better) Translates to: SFHVCLPHSPEG*SWEHSLNTSCV Trigger: TACACATGATGTATTGAGAGAGTGCTCCCAGGAGCAACCTTCAGGGGAGTGAGGGAGGCAGACATGGAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS CCA 72 bp | CATGTCTGCCTCCCTCACTCCCCTGAAGGTTGCTCCTaGGAGCACTCTCTCAATACATCATGTGTACTCAAA | + |
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Preference number: 6 (lower is better) Translates to: HVCLPHSPEGCS*EHSLNTSCVLK Trigger: TTTGAGTACACATGATGTATTGAGAGAGTGCTCCCAGGAGCAACCTTCAGGGGAGTGAGGGAGGCAGACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS CCA 72 bp | TGGGAATTATACATTCTTTCCCCATCTAGGGGCCAATaGCCCAGAACTGACTGGAGAGGTGCTGCAAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: WELYILSPSRGQ*PRTDWRGAAKS Trigger: GGACTTTGCAGCACCTCTCCAGTCAGTTCTGGGCCATTGGCCCCTAGATGGGGAAAGAATGTATAATTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS CAA 72 bp | AGGATAGCCATTTCTGAATTTATCTCACAGGGGTCCTaGAGGAGGGCAGCCAGTGGAATTGGGGAAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: RIAISEFISQGS*RRAASGIGEGP Trigger: TGGACCTTCCCCAATTCCACTGGCTGCCCTCCTCAAGGACCCCTGTGAGATAAATTCAGAAATGGCTATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000508174.6 ENST00000654276.1 ENST00000656371.1 ENST00000661529.1 ENST00000670961.1 |
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| CDS TCA 72 bp | CACAAGGTGAAGTCCCACAATAGGCCATCTGTAAGCTaGGGAGCAAGGAAGCCAGTCCAAGTCCCAAAACTT | + |
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Preference number: 6 (lower is better) Translates to: HKVKSHNRPSVS*GARKPVQVPKL Trigger: AAGTTTTGGGACTTGGACTGGCTTCCTTGCTCCTCAGCTTACAGATGGCCTATTGTGGGACTTCACCTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000654276.1 ENST00000654687.1 ENST00000656371.1 ENST00000661529.1 ENST00000661950.1 ENST00000664228.1 ENST00000668018.1 ENST00000670961.1 |
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| CDS CCA 72 bp | TGGAGTCTGATATTCGAGGTCAGGAAGCATCTAGCATaGGAGAAAGATGAAGGCCAGAAGACTCAGCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: WSLIFEVRKHLA*EKDEGQKTQPV Trigger: GACTGGCTGAGTCTTCTGGCCTTCATCTTTCTCCCATGCTAGATGCTTCCTGACCTCGAATATCAGACTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000654276.1 ENST00000654687.1 ENST00000656371.1 ENST00000661529.1 ENST00000661950.1 ENST00000664228.1 ENST00000668018.1 ENST00000670961.1 |
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| CDS CAA 72 bp | GCTTCCGGGCATTTCCAGAAGGCATCTCACATATGCTaGAAACAGGTCAGTCAGCTCTCAGGTGACAACTAC | + |
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Preference number: 6 (lower is better) Translates to: ASGHFQKASHIC*KQVSQLSGDNY Trigger: GTAGTTGTCACCTGAGAGCTGACTGACCTGTTTCAAGCATATGTGAGATGCCTTCTGGAAATGCCCGGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS CAA 90 bp | GAGCGAGTTAAGGGAAATGCCTTCATGGCCTGTTCTAGCTCTCCATaGGCCAAGGTTAGTGGAAGCCAGAAAGCACAGATAGAAGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: ERVKGNAFMACSSSP*AKVSGSQKAQIEAV Trigger: AACAGCTTCTATCTGTGCTTTCTGGCTTCCACTAACCTTGGCCAATGGAGAGCTAGAACAGGCCATGAAGGCATTTCCCTTAACTCGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS TCA 72 bp | GAAACAGAAATAGCTAGGTGTCACAGTTCAGGTCAATaGGATGCTGGCAGAAATCTCAAGGGGGACGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: ETEIARCHSSGQ*DAGRNLKGDGE Trigger: CTCACCGTCCCCCTTGAGATTTCTGCCAGCATCTCATTGACCTGAACTGTGACACCTAGCTATTTCTGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS CAA 90 bp | CTTCCGTCTGTGGCCAAAGGTCCAAGAGTCCAAAAGCTAAAGAACTaGGAGTCTGATATTCGAGGTCAGGAAGCATCTAGCATGGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: LPSVAKGPRVQKLKN*ESDIRGQEASSMGE Trigger: TTCTCCCATGCTAGATGCTTCCTGACCTCGAATATCAGACTCCAAGTTCTTTAGCTTTTGGACTCTTGGACCTTTGGCCACAGACGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000654276.1 ENST00000654687.1 ENST00000656371.1 ENST00000661529.1 ENST00000661950.1 ENST00000664228.1 ENST00000668018.1 ENST00000670961.1 |
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| CDS CAA 90 bp | CACAGCATCCTGATGCTTATCACCTGGACAGTTTCCAGCCACAGATaGGTCTTCGAGTTGTTGAGGAGATTGTCAGAGAGATTGATAGTG | + |
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Preference number: 6 (lower is better) Translates to: HSILMLITWTVSSHR*VFELLRRLSERLIV Trigger: CACTATCAATCTCTCTGACAATCTCCTCAACAACTCGAAGACCAATCTGTGGCTGGAAACTGTCCAGGTGATAAGCATCAGGATGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654276.1 ENST00000656371.1 |
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| CDS TCA 72 bp | CATTCCTCAGCTCTGATGTGCATTTGGCTGCTTTCCTaGATTCACACATCTCTCTGCTCATGTGCTTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: HSSALMCIWLLS*IHTSLCSCACA Trigger: TGCACAAGCACATGAGCAGAGAGATGTGTGAATTCAGGAAAGCAGCCAAATGCACATCAGAGCTGAGGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS CCA 72 bp | CCCAGGCCAGTTTTCGTGATACAGTTAAAAACTGGTTaGGCCGCCGGCAGAATCAACTGTTTAAACATCTTG | + |
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Preference number: 6 (lower is better) Translates to: PRPVFVIQLKTG*AAGRINCLNIL Trigger: CAAGATGTTTAAACAGTTGATTCTGCCGGCGGCCCAACCAGTTTTTAACTGTATCACGAAAACTGGCCTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS CAA 72 bp | GTGGCCAAAGGTCCAAGAGTCCAAAAGCTAAAGAACTaGGAGTCTGATATTCGAGGTCAGGAAGCATCTAGC | + |
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Preference number: 6 (lower is better) Translates to: VAKGPRVQKLKN*ESDIRGQEASS Trigger: GCTAGATGCTTCCTGACCTCGAATATCAGACTCCAAGTTCTTTAGCTTTTGGACTCTTGGACCTTTGGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000654276.1 ENST00000654687.1 ENST00000656371.1 ENST00000661529.1 ENST00000661950.1 ENST00000664228.1 ENST00000668018.1 ENST00000670961.1 |
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| CDS CAA 90 bp | ACTGACTGGAGAGGTGCTGCAAAGTCCCTGTTTCCTTGTCCCACGTaGGAAAAGACTCTGCATCAGAATTTACACTACAGAACTTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: TDWRGAAKSLFPCPT*EKTLHQNLHYRTFH Trigger: ATGGAAAGTTCTGTAGTGTAAATTCTGATGCAGAGTCTTTTCCAACGTGGGACAAGGAAACAGGGACTTTGCAGCACCTCTCCAGTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS TCA 72 bp | CCAAGATTGAGTATGGGTTTGTGTCTCCCAGCTCACTaGTTCAAATGTTCATCTCCTTTGGTGACACCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PRLSMGLCLPAH*FKCSSPLVTPS Trigger: TGAGGGTGTCACCAAAGGAGATGAACATTTGAATCAGTGAGCTGGGAGACACAAACCCATACTCAATCTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000654276.1 ENST00000654687.1 ENST00000656371.1 ENST00000661529.1 ENST00000661950.1 ENST00000664228.1 ENST00000668018.1 ENST00000670961.1 |
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| CDS TCA 72 bp | GGTTCAGGATTAGGAAGCCTGATTATGCCACAGATCTaGACCTTGTTGAGCAATCCAAAACTCCTTCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: GSGLGSLIMPQI*TLLSNPKLLPV Trigger: CACTGGAAGGAGTTTTGGATTGCTCAACAAGGTTCAGATCTGTGGCATAATCAGGCTTCCTAATCCTGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS TCA 72 bp | GTGCTGCTTTTTGCCCTTTATCCCACTTGCTCTTGCTaGAGTTCAACCTTGAAATGCCTCATCCCATTAGCT | + |
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Preference number: 6 (lower is better) Translates to: VLLFALYPTCSC*SSTLKCLIPLA Trigger: AGCTAATGGGATGAGGCATTTCAAGGTTGAACTTCAGCAAGAGCAAGTGGGATAAAGGGCAAAAAGCAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS GCA 72 bp | AGTTCAACCTTGAAATGCCTCATCCCATTAGCTATATaGTTCCGGGCATTTCCAGAAGGCATCTCACATATG | + |
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Preference number: 6 (lower is better) Translates to: SSTLKCLIPLAI*FRAFPEGISHM Trigger: CATATGTGAGATGCCTTCTGGAAATGCCCGGAAGCATATAGCTAATGGGATGAGGCATTTCAAGGTTGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS GCA 72 bp | TTCCTGAATTCACACATCTCTCTGCTCATGTGCTTGTaGATTTTGCAGAAGTGTCACTACCCAAGCTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: FLNSHISLLMCL*ILQKCHYPSFA Trigger: TGCAAAGCTTGGGTAGTGACACTTCTGCAAAATGCACAAGCACATGAGCAGAGAGATGTGTGAATTCAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS GCA 72 bp | AGTCCCTGTTTCCTTGTCCCACGTTGGAAAAGACTCTaGATCAGAATTTACACTACAGAACTTTCCATGGGA | + |
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Preference number: 6 (lower is better) Translates to: SPCFLVPRWKRL*IRIYTTELSMG Trigger: TCCCATGGAAAGTTCTGTAGTGTAAATTCTGATGCAGAGTCTTTTCCAACGTGGGACAAGGAAACAGGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661529.1 ENST00000661950.1 |
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| CDS CAA 72 bp | GAATGTGCTGCTTTTTGCCCTTTATCCCACTTGCTCTaGCTGAAGTTCAACCTTGAAATGCCTCATCCCATT | + |
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Preference number: 6 (lower is better) Translates to: ECAAFCPLSHLL*LKFNLEMPHPI Trigger: AATGGGATGAGGCATTTCAAGGTTGAACTTCAGCAAGAGCAAGTGGGATAAAGGGCAAAAAGCAGCACATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS TCA 72 bp | TCACATATGCTTGAAACAGGTCAGTCAGCTCTCAGGTaGCAACTACGAGATACAACAACAACTTTGGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: SHMLETGQSALR*QLRDTTTTLVQ Trigger: CTGAACCAAAGTTGTTGTTGTATCTCGTAGTTGTCACCTGAGAGCTGACTGACCTGTTTCAAGCATATGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS CCA 72 bp | CTCTCAGGTGACAACTACGAGATACAACAACAACTTTaGTTCAGGATTAGGAAGCCTGATTATGCCACAGAT | + |
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Preference number: 6 (lower is better) Translates to: LSGDNYEIQQQL*FRIRKPDYATD Trigger: ATCTGTGGCATAATCAGGCTTCCTAATCCTGAACCAAAGTTGTTGTTGTATCTCGTAGTTGTCACCTGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS CAA 72 bp | GAGCAATCCAAAACTCCTTCCAGTGAAGCAGATATTTaGATCTCCTCTCCAAAGCTTGTGTTGATCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: EQSKTPSSEADI*ISSPKLVLISP Trigger: TGGAGAGATCAACACAAGCTTTGGAGAGGAGATCAAAATATCTGCTTCACTGGAAGGAGTTTTGGATTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS CAA 90 bp | TGCTCATGTGCTTGTGCATTTTGCAGAAGTGTCACTACCCAAGCTTaGCAAAATAACGAACTCAATCTTCTAAGTGACTTTGCTGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: CSCACAFCRSVTTQA*QNNELNLLSDFAEA Trigger: AGCCTCAGCAAAGTCACTTAGAAGATTGAGTTCGTTATTTTGCAAAGCTTGGGTAGTGACACTTCTGCAAAATGCACAAGCACATGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS TCA 72 bp | GAGTTGTTGAGGAGATTGTCAGAGAGATTGATAGTGTaGGCCATACTGGAATTACCCATGATAAATGACACG | + |
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Preference number: 6 (lower is better) Translates to: ELLRRLSERLIV*AILELPMINDT Trigger: CGTGTCATTTATCATGGGTAATTCCAGTATGGCTCACACTATCAATCTCTCTGACAATCTCCTCAACAACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654276.1 ENST00000656371.1 |
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| CDS CAA 90 bp | AACCTTGTTGAGCAATCCAAAACTCCTTCCAGTGAAGCAGATATTTaGATCTCCTCTCCAAAGCTTGTGTTGATCTCTCCATTGGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: NLVEQSKTPSSEADI*ISSPKLVLISPLVS Trigger: TGAAACCAATGGAGAGATCAACACAAGCTTTGGAGAGGAGATCAAAATATCTGCTTCACTGGAAGGAGTTTTGGATTGCTCAACAAGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS CCA 72 bp | ACCAGAGACAAAAGATATAAACTTGTGGGAGCTCTATaGCCTCACCTATTACCTGAGACGACTGAATATTTA | + |
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Preference number: 6 (lower is better) Translates to: TRDKRYKLVGAL*PHLLPETTEYL Trigger: TAAATATTCAGTCGTCTCAGGTAATAGGTGAGGCCATAGAGCTCCCACAAGTTTATATCTTTTGTCTCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664228.1 |
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| CDS CAA 72 bp | GAAGCAGATATTTTGATCTCCTCTCCAAAGCTTGTGTaGATCTCTCCATTGGTTTCAAAACTTTCTGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: EADILISSPKLV*ISPLVSKLSVC Trigger: ACACACAGAAAGTTTTGAAACCAATGGAGAGATCAACACAAGCTTTGGAGAGGAGATCAAAATATCTGCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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| CDS CAA 72 bp | GCTTGTGCATTTTGCAGAAGTGTCACTACCCAAGCTTaGCAAAATAACGAACTCAATCTTCTAAGTGACTTT | + |
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Preference number: 6 (lower is better) Translates to: ACAFCRSVTTQA*QNNELNLLSDF Trigger: AAAGTCACTTAGAAGATTGAGTTCGTTATTTTGCAAAGCTTGGGTAGTGACACTTCTGCAAAATGCACAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000508174.6 ENST00000515544.2 ENST00000671684.1 |
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