Pregenerated sensors for LINC00974 (Homo sapiens)
Ensembl gene IDs: ENSG00000226629Ensembl transcript IDs: ENST00000456403.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGAGCTCGTAAGCAGGGACATGCCCCTGCCCTGGAGGTTACTCAGTaGGGCTGGGAGTTTCGCAGGTGGTGCTTCTCAGTCCAGCGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GARKQGHAPALEVTQ*GWEFRRWCFSVQRC Trigger: GCAGCGCTGGACTGAGAAGCACCACCTGCGAAACTCCCAGCCCCACTGAGTAACCTCCAGGGCAGGGGCATGTCCCTGCTTACGAGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CCA 90 bp | GTGACGGGCTGGTGGGAGCTCGTAAGCAGGGACATGCCCCTGCCCTaGAGGTTACTCAGTGGGGCTGGGAGTTTCGCAGGTGGTGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: VTGWWELVSRDMPLP*RLLSGAGSFAGGAS Trigger: AGAAGCACCACCTGCGAAACTCCCAGCCCCACTGAGTAACCTCCAGGGCAGGGGCATGTCCCTGCTTACGAGCTCCCACCAGCCCGTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CCA 90 bp | CGTAAGCAGGGACATGCCCCTGCCCTGGAGGTTACTCAGTGGGGCTaGGAGTTTCGCAGGTGGTGCTTCTCAGTCCAGCGCTGCTTCCGT | + |
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Preference number: 5 (lower is better) Translates to: RKQGHAPALEVTQWG*EFRRWCFSVQRCFR Trigger: ACGGAAGCAGCGCTGGACTGAGAAGCACCACCTGCGAAACTCCCAGCCCCACTGAGTAACCTCCAGGGCAGGGGCATGTCCCTGCTTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS TCA 90 bp | CGCAGGTGGTGCTTCTCAGTCCAGCGCTGCTTCCGTGGGTTAGGATaGAGACCCATCTTCTTGCCTTGTCCTCCTCCACGAGGGGCTTAT | + |
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Preference number: 5 (lower is better) Translates to: RRWCFSVQRCFRGLG*RPIFLPCPPPRGAY Trigger: ATAAGCCCCTCGTGGAGGAGGACAAGGCAAGAAGATGGGTCTTCATCCTAACCCACGGAAGCAGCGCTGGACTGAGAAGCACCACCTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CCA 90 bp | TGCCTTGTCCTCCTCCACGAGGGGCTTATCCAGAACAAAAGCTGTTaGCAGTTCCTGGCCAACAGGTTCTCCTCCTCCACTGCAGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: CLVLLHEGLIQNKSC*QFLANRFSSSTAGL Trigger: GAGCCCTGCAGTGGAGGAGGAGAACCTGTTGGCCAGGAACTGCCAACAGCTTTTGTTCTGGATAAGCCCCTCGTGGAGGAGGACAAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CCA 90 bp | CTGGGAGTTTCGCAGGTGGTGCTTCTCAGTCCAGCGCTGCTTCCGTaGGTTAGGATGAAGACCCATCTTCTTGCCTTGTCCTCCTCCACG | + |
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Preference number: 5 (lower is better) Translates to: LGVSQVVLLSPALLP*VRMKTHLLALSSST Trigger: CGTGGAGGAGGACAAGGCAAGAAGATGGGTCTTCATCCTAACCCACGGAAGCAGCGCTGGACTGAGAAGCACCACCTGCGAAACTCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS TCA 90 bp | CTCCTTGTCCCATTCTGCCTAAGGGCTGGAGCTTCTCAGAAACTCTaGCAGGACATGTGTCCATCTTCAGTGGGGACCCTCCCCCTCCTA | + |
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Preference number: 5 (lower is better) Translates to: LLVPFCLRAGASQKL*QDMCPSSVGTLPLL Trigger: TAGGAGGGGGAGGGTCCCCACTGAAGATGGACACATGTCCTGTCAGAGTTTCTGAGAAGCTCCAGCCCTTAGGCAGAATGGGACAAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS GCA 90 bp | GGGAAGCTGGGGGTAGTGAGAAATAAGGAAGATGACTTCTGTACATaGTTGCCACCGTCCCAGGACAGACGAGGCCCAGCTGCCATACAG | + |
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Preference number: 5 (lower is better) Translates to: GKLGVVRNKEDDFCT*LPPSQDRRGPAAIQ Trigger: CTGTATGGCAGCTGGGCCTCGTCTGTCCTGGGACGGTGGCAAGCATGTACAGAAGTCATCTTCCTTATTTCTCACTACCCCCAGCTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS GCA 90 bp | GATGAAGGAGGGGCACTGTCCCCACAACTCCTCATGCTCGGCTTCTaGAGTCCCGAGTACAGACCCAAGTCTGTTTCTCCTTGTCCCATT | + |
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Preference number: 5 (lower is better) Translates to: DEGGALSPQLLMLGF*SPEYRPKSVSPCPI Trigger: AATGGGACAAGGAGAAACAGACTTGGGTCTGTACTCGGGACTGCAGAAGCCGAGCATGAGGAGTTGTGGGGACAGTGCCCCTCCTTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS TCA 90 bp | CACATTGCAAAGGATCGTGTACCCAGCTCAGGGGCACAAGGTGTGTaGTTGCGAGGACATCAGAGAAAACAAGGTGCGATGAACTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: HIAKDRVPSSGAQGV*LRGHQRKQGAMNWR Trigger: CCGCCAGTTCATCGCACCTTGTTTTCTCTGATGTCCTCGCAATCACACACCTTGTGCCCCTGAGCTGGGTACACGATCCTTTGCAATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS GCA 90 bp | GGGAGGCCAAGGCCAAAAGCTTTGAGAAGTCTGTTCATGGGTAGCTaGTTGCTTTCCAAGAAGACATTTCCAGAGCTTTCCTGCTCGTGG | + |
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Preference number: 5 (lower is better) Translates to: GRPRPKALRSLFMGS*LLSKKTFPELSCSW Trigger: CCACGAGCAGGAAAGCTCTGGAAATGTCTTCTTGGAAAGCAAGCAGCTACCCATGAACAGACTTCTCAAAGCTTTTGGCCTTGGCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS TCA 90 bp | AGTACAGCTAGTTCCTGCCTGACTGAACCACTGTCATCTGAGAATTaGGGGTCAAAGTTGGATCTTCCCAGCTCAGAGGAGAAGCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: STASSCLTEPLSSEN*GSKLDLPSSEEKPS Trigger: AGAAGGCTTCTCCTCTGAGCTGGGAAGATCCAACTTTGACCCTCAATTCTCAGATGACAGTGGTTCAGTCAGGCAGGAACTAGCTGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CCA 90 bp | TACAGACCCAAGTCTGTTTCTCCTTGTCCCATTCTGCCTAAGGGCTaGAGCTTCTCAGAAACTCTGACAGGACATGTGTCCATCTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: YRPKSVSPCPILPKG*SFSETLTGHVSIFS Trigger: ACTGAAGATGGACACATGTCCTGTCAGAGTTTCTGAGAAGCTCCAGCCCTTAGGCAGAATGGGACAAGGAGAAACAGACTTGGGTCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS TCA 90 bp | TCCCACCATGAATTCAGCAGCGCATCTCGTGGTCAAATCCATAGGTaGTTTCTGGGTTCTGTAGCCTCCTCTTATAAACTTACAAAGCAC | + |
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Preference number: 5 (lower is better) Translates to: SHHEFSSASRGQIHR*FLGSVASSYKLTKH Trigger: GTGCTTTGTAAGTTTATAAGAGGAGGCTACAGAACCCAGAAATCACCTATGGATTTGACCACGAGATGCGCTGCTGAATTCATGGTGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS GCA 72 bp | ATGCTTGCCACCGTCCCAGGACAGACGAGGCCCAGCTaGCATACAGAGGAGGTGACAGCATGGAGCGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: MLATVPGQTRPS*HTEEVTAWSGV Trigger: GACCCCGCTCCATGCTGTCACCTCCTCTGTATGGCAGCTGGGCCTCGTCTGTCCTGGGACGGTGGCAAGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CCA 72 bp | GGACATGCCCCTGCCCTGGAGGTTACTCAGTGGGGCTaGGAGTTTCGCAGGTGGTGCTTCTCAGTCCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: GHAPALEVTQWG*EFRRWCFSVQR Trigger: GCGCTGGACTGAGAAGCACCACCTGCGAAACTCCCAGCCCCACTGAGTAACCTCCAGGGCAGGGGCATGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CCA 72 bp | TGGTGGGAGCTCGTAAGCAGGGACATGCCCCTGCCCTaGAGGTTACTCAGTGGGGCTGGGAGTTTCGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: WWELVSRDMPLP*RLLSGAGSFAG Trigger: ACCTGCGAAACTCCCAGCCCCACTGAGTAACCTCCAGGGCAGGGGCATGTCCCTGCTTACGAGCTCCCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CCA 72 bp | AAGCAGGGACATGCCCCTGCCCTGGAGGTTACTCAGTaGGGCTGGGAGTTTCGCAGGTGGTGCTTCTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: KQGHAPALEVTQ*GWEFRRWCFSV Trigger: GACTGAGAAGCACCACCTGCGAAACTCCCAGCCCCACTGAGTAACCTCCAGGGCAGGGGCATGTCCCTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS GCA 72 bp | GAGGTTACTCAGTGGGGCTGGGAGTTTCGCAGGTGGTaGTTCTCAGTCCAGCGCTGCTTCCGTGGGTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: EVTQWGWEFRRW*FSVQRCFRGLG Trigger: TCCTAACCCACGGAAGCAGCGCTGGACTGAGAAGCACCACCTGCGAAACTCCCAGCCCCACTGAGTAACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CCA 72 bp | CTGGAGGTTACTCAGTGGGGCTGGGAGTTTCGCAGGTaGTGCTTCTCAGTCCAGCGCTGCTTCCGTGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: LEVTQWGWEFRR*CFSVQRCFRGL Trigger: TAACCCACGGAAGCAGCGCTGGACTGAGAAGCACCACCTGCGAAACTCCCAGCCCCACTGAGTAACCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS GCA 72 bp | GGGGCACTGTCCCCACAACTCCTCATGCTCGGCTTCTaGAGTCCCGAGTACAGACCCAAGTCTGTTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: GALSPQLLMLGF*SPEYRPKSVSP Trigger: AGGAGAAACAGACTTGGGTCTGTACTCGGGACTGCAGAAGCCGAGCATGAGGAGTTGTGGGGACAGTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CAA 90 bp | TTGCCTTGTCCTCCTCCACGAGGGGCTTATCCAGAACAAAAGCTGTaGGCAGTTCCTGGCCAACAGGTTCTCCTCCTCCACTGCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LPCPPPRGAYPEQKL*AVPGQQVLLLHCRA Trigger: AGCCCTGCAGTGGAGGAGGAGAACCTGTTGGCCAGGAACTGCCAACAGCTTTTGTTCTGGATAAGCCCCTCGTGGAGGAGGACAAGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CCA 72 bp | TCGCAGGTGGTGCTTCTCAGTCCAGCGCTGCTTCCGTaGGTTAGGATGAAGACCCATCTTCTTGCCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SQVVLLSPALLP*VRMKTHLLALS Trigger: GGACAAGGCAAGAAGATGGGTCTTCATCCTAACCCACGGAAGCAGCGCTGGACTGAGAAGCACCACCTGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CAA 72 bp | CCTCCTCCACGAGGGGCTTATCCAGAACAAAAGCTGTaGGCAGTTCCTGGCCAACAGGTTCTCCTCCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: PPPRGAYPEQKL*AVPGQQVLLLH Trigger: GTGGAGGAGGAGAACCTGTTGGCCAGGAACTGCCAACAGCTTTTGTTCTGGATAAGCCCCTCGTGGAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CAA 90 bp | CCAGCGCTGCTTCCGTGGGTTAGGATGAAGACCCATCTTCTTGCCTaGTCCTCCTCCACGAGGGGCTTATCCAGAACAAAAGCTGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: PALLPWVRMKTHLLA*SSSTRGLSRTKAVG Trigger: GCCAACAGCTTTTGTTCTGGATAAGCCCCTCGTGGAGGAGGACAAGGCAAGAAGATGGGTCTTCATCCTAACCCACGGAAGCAGCGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CCA 72 bp | AGGGGCTTATCCAGAACAAAAGCTGTTGGCAGTTCCTaGCCAACAGGTTCTCCTCCTCCACTGCAGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RGLSRTKAVGSS*PTGSPPPLQGS Trigger: AGAGCCCTGCAGTGGAGGAGGAGAACCTGTTGGCCAGGAACTGCCAACAGCTTTTGTTCTGGATAAGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS TCA 72 bp | GTAGGCATTTGTTGGGACAATGACAGGGCCCTGGCCTaGTCAAGGGAAGGATCAGGGGGAGAAGGAGATACT | + |
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Preference number: 6 (lower is better) Translates to: VGICWDNDRALA*SREGSGGEGDT Trigger: AGTATCTCCTTCTCCCCCTGATCCTTCCCTTGATCAGGCCAGGGCCCTGTCATTGTCCCAACAAATGCCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS GCA 72 bp | GGGGTAGTGAGAAATAAGGAAGATGACTTCTGTACATaGTTGCCACCGTCCCAGGACAGACGAGGCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GVVRNKEDDFCT*LPPSQDRRGPA Trigger: AGCTGGGCCTCGTCTGTCCTGGGACGGTGGCAAGCATGTACAGAAGTCATCTTCCTTATTTCTCACTACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CCA 72 bp | GCCCCATTCCTTTATCAGTCACGCTCGCGCAAGCACTaGCCTCTGCCTCTCCTTGCAGAAGTGACTTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: APFLYQSRSRKH*PLPLLAEVTCL Trigger: TAAACAAGTCACTTCTGCAAGGAGAGGCAGAGGCCAGTGCTTGCGCGAGCGTGACTGATAAAGGAATGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS TCA 72 bp | AGTCCCAGCACCTTGGGAGGCCAAGGCCAAAAGCTTTaGGAAGTCTGTTCATGGGTAGCTGCTTGCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SPSTLGGQGQKL*EVCSWVAACFP Trigger: TGGAAAGCAAGCAGCTACCCATGAACAGACTTCTCAAAGCTTTTGGCCTTGGCCTCCCAAGGTGCTGGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS TCA 72 bp | AAGGATCGTGTACCCAGCTCAGGGGCACAAGGTGTGTaGTTGCGAGGACATCAGAGAAAACAAGGTGCGATG | + |
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Preference number: 6 (lower is better) Translates to: KDRVPSSGAQGV*LRGHQRKQGAM Trigger: CATCGCACCTTGTTTTCTCTGATGTCCTCGCAATCACACACCTTGTGCCCCTGAGCTGGGTACACGATCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS GCA 72 bp | GCCGAGGTGAGAATTAATGAAATAGTCTGTCTAACGTaGCTGGGACCTACCAGAAGCTCAGCCAGTGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: AEVRINEIVCLT*LGPTRSSASGV Trigger: GACTCCACTGGCTGAGCTTCTGGTAGGTCCCAGGCACGTTAGACAGACTATTTCATTAATTCTCACCTCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CAA 72 bp | CTTCCGTGGGTTAGGATGAAGACCCATCTTCTTGCCTaGTCCTCCTCCACGAGGGGCTTATCCAGAACAAAA | + |
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Preference number: 6 (lower is better) Translates to: LPWVRMKTHLLA*SSSTRGLSRTK Trigger: TTTTGTTCTGGATAAGCCCCTCGTGGAGGAGGACAAGGCAAGAAGATGGGTCTTCATCCTAACCCACGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CAA 72 bp | AATTGTTTTAGACAGCATGAGGTGAAGAGGGTGGGCTaGCGGGTCAGACCCACTCAGATCCTTTGTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: NCFRQHEVKRVG*RVRPTQILCQL Trigger: CAGCTGACAAAGGATCTGAGTGGGTCTGACCCGCAAGCCCACCCTCTTCACCTCATGCTGTCTAAAACAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CAA 72 bp | TCTCTAAACAAAGGAGGGGCTCAGCTGGGTAGGTTGTaGCAAAGAGAACTCACTTCAGAGCCAAGGCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SLNKGGAQLGRL*QRELTSEPRQP Trigger: TGGCTGCCTTGGCTCTGAAGTGAGTTCTCTTTGCAACAACCTACCCAGCTGAGCCCCTCCTTTGTTTAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CAA 90 bp | GGTGTCTGTAATTGTTTTAGACAGCATGAGGTGAAGAGGGTGGGCTaGCGGGTCAGACCCACTCAGATCCTTTGTCAGCTGAGTTATGTC | + |
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Preference number: 6 (lower is better) Translates to: GVCNCFRQHEVKRVG*RVRPTQILCQLSYV Trigger: GACATAACTCAGCTGACAAAGGATCTGAGTGGGTCTGACCCGCAAGCCCACCCTCTTCACCTCATGCTGTCTAAAACAATTACAGACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CAA 90 bp | AGGCCAAGGCCAAAAGCTTTGAGAAGTCTGTTCATGGGTAGCTGCTaGCTTTCCAAGAAGACATTTCCAGAGCTTTCCTGCTCGTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: RPRPKALRSLFMGSC*LSKKTFPELSCSWE Trigger: CTCCCACGAGCAGGAAAGCTCTGGAAATGTCTTCTTGGAAAGCAAGCAGCTACCCATGAACAGACTTCTCAAAGCTTTTGGCCTTGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CCA 72 bp | AAGTCTGTTTCTCCTTGTCCCATTCTGCCTAAGGGCTaGAGCTTCTCAGAAACTCTGACAGGACATGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: KSVSPCPILPKG*SFSETLTGHVS Trigger: GGACACATGTCCTGTCAGAGTTTCTGAGAAGCTCCAGCCCTTAGGCAGAATGGGACAAGGAGAAACAGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS TCA 72 bp | GGATCTCAGTCTAGTAAGAGGAACAGAGAAAGGAACTaGTTTTATTCCTGTTTGGGCCTGAGATGGGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: GSQSSKRNRERN*FYSCLGLRWGV Trigger: CACTCCCCATCTCAGGCCCAAACAGGAATAAAATCAGTTCCTTTCTCTGTTCCTCTTACTAGACTGAGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS GCA 72 bp | AGCCAGGCCCTGTCACTTAAAAGCTATGTGACCTTGTaGAAGTCATTGAACCTGTCTAAGACTCAGGATACT | + |
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Preference number: 6 (lower is better) Translates to: SQALSLKSYVTL*KSLNLSKTQDT Trigger: AGTATCCTGAGTCTTAGACAGGTTCAATGACTTGCACAAGGTCACATAGCTTTTAAGTGACAGGGCCTGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS TCA 72 bp | GAATTCAGCAGCGCATCTCGTGGTCAAATCCATAGGTaGTTTCTGGGTTCTGTAGCCTCCTCTTATAAACTT | + |
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Preference number: 6 (lower is better) Translates to: EFSSASRGQIHR*FLGSVASSYKL Trigger: AAGTTTATAAGAGGAGGCTACAGAACCCAGAAATCACCTATGGATTTGACCACGAGATGCGCTGCTGAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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| CDS CAA 72 bp | CTGTCACTTAAAAGCTATGTGACCTTGTGCAAGTCATaGAACCTGTCTAAGACTCAGGATACTGAGACAGCA | + |
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Preference number: 6 (lower is better) Translates to: LSLKSYVTLCKS*NLSKTQDTETA Trigger: TGCTGTCTCAGTATCCTGAGTCTTAGACAGGTTCAATGACTTGCACAAGGTCACATAGCTTTTAAGTGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456403.1 |
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