Pregenerated sensors for LINC00968 (Homo sapiens)
Ensembl gene IDs: ENSG00000246430Ensembl transcript IDs: ENST00000499425.1, ENST00000518943.1, ENST00000519144.5, ENST00000521483.1, ENST00000523664.1, ENST00000523786.5, ENST00000524338.1, ENST00000653444.1, ENST00000665904.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAGCCTGTGGAGGGTGGGCAAGGCTGCACCCTGGGGGCTGGTCCTTaGTCAGAGCCTCTCTGTAGCTTAGGGGGAGGCTGCACCTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: EPVEGGQGCTLGAGP*SEPLCSLGGGCTLF Trigger: GAACAAGGTGCAGCCTCCCCCTAAGCTACAGAGAGGCTCTGAGCAAGGACCAGCCCCCAGGGTGCAGCCTTGCCCACCCTCCACAGGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000499425.1 ENST00000665904.1 |
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| CDS CCA 90 bp | TTGACCATTTGCTCTCTAGAGCCACCCCATCTGCTCTGGAGCCTGTaGAGGGTGGGCAAGGCTGCACCCTGGGGGCTGGTCCTTGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LTICSLEPPHLLWSL*RVGKAAPWGLVLAQ Trigger: CTGAGCAAGGACCAGCCCCCAGGGTGCAGCCTTGCCCACCCTCCACAGGCTCCAGAGCAGATGGGGTGGCTCTAGAGAGCAAATGGTCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000499425.1 ENST00000665904.1 |
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| CDS GCA 90 bp | AGGAGTCTGGCCCCGGTCTCTGTGCTTTTAGCAGCTCAGCCCAGCTaGTTCTCGGCCACCCTTGCGACATCATCTTCCATCTCACACTGC | + |
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Preference number: 5 (lower is better) Translates to: RSLAPVSVLLAAQPS*FSATLATSSSISHC Trigger: GCAGTGTGAGATGGAAGATGATGTCGCAAGGGTGGCCGAGAAGCAGCTGGGCTGAGCTGCTAAAAGCACAGAGACCGGGGCCAGACTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000499425.1 ENST00000518943.1 ENST00000523664.1 ENST00000524338.1 ENST00000665904.1 |
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| CDS GCA 90 bp | CTCTGTGCTTTTAGCAGCTCAGCCCAGCTGCTTCTCGGCCACCCTTaGGACATCATCTTCCATCTCACACTGCCAAGGGCAGGAATGCCA | + |
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Preference number: 5 (lower is better) Translates to: LCAFSSSAQLLLGHP*DIIFHLTLPRAGMP Trigger: TGGCATTCCTGCCCTTGGCAGTGTGAGATGGAAGATGATGTCGCAAGGGTGGCCGAGAAGCAGCTGGGCTGAGCTGCTAAAAGCACAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000499425.1 ENST00000518943.1 ENST00000523664.1 ENST00000524338.1 ENST00000665904.1 |
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| CDS TCA 90 bp | CTCCATGAGCACGGGCTGCACTGCTGGTGTGAACCATGGCAGGACTaGTGCCTGAAGTTACCCAGCTGGTACTTAGTGGAAGCAGGATTT | + |
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Preference number: 5 (lower is better) Translates to: LHEHGLHCWCEPWQD*CLKLPSWYLVEAGF Trigger: AAATCCTGCTTCCACTAAGTACCAGCTGGGTAACTTCAGGCATCAGTCCTGCCATGGTTCACACCAGCAGTGCAGCCCGTGCTCATGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521483.1 |
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| CDS GCA 90 bp | CTTTTCAGCTTCTGGAGAAACATTTCCTGTCAACTGGGCTCCACCTaGAGAGATGAGACACAGCTTGGGCAGAAGCATGGACCTCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: LFSFWRNISCQLGST*RDETQLGQKHGPPG Trigger: CCCTGGAGGTCCATGCTTCTGCCCAAGCTGTGTCTCATCTCTGCAGGTGGAGCCCAGTTGACAGGAAATGTTTCTCCAGAAGCTGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518943.1 ENST00000523664.1 |
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| CDS CCA 90 bp | AGGCTGGAAGTGTCATTAGCTGGGAAGGATGAATGCAGCAGCTATTaGAAGGATAAACAGAAGGTCCAGGTGGGAGCCGATTCTCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: RLEVSLAGKDECSSY*KDKQKVQVGADSPR Trigger: CCTTGGAGAATCGGCTCCCACCTGGACCTTCTGTTTATCCTTCCAATAGCTGCTGCATTCATCCTTCCCAGCTAATGACACTTCCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000499425.1 ENST00000519144.5 ENST00000521483.1 ENST00000523786.5 ENST00000665904.1 |
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| CDS CCA 90 bp | TTACCAGGCAGCTTTTCAGCTTCTGGAGAAACATTTCCTGTCAACTaGGCTCCACCTGAAGTTACCCAGCTGGTACTTAGTGGAAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LPGSFSASGETFPVN*APPEVTQLVLSGSR Trigger: CCTGCTTCCACTAAGTACCAGCTGGGTAACTTCAGGTGGAGCCCAGTTGACAGGAAATGTTTCTCCAGAAGCTGAAAAGCTGCCTGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499425.1 ENST00000524338.1 ENST00000665904.1 |
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| CDS CCA 90 bp | AGGATGAATGCAGCAGCTATTGGAAGGATAAACAGAAGGTCCAGGTaGGAGCCGATTCTCCAAGGAGCTCGCTTCTTTGGTTCTCAATGG | + |
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Preference number: 5 (lower is better) Translates to: RMNAAAIGRINRRSR*EPILQGARFFGSQW Trigger: CCATTGAGAACCAAAGAAGCGAGCTCCTTGGAGAATCGGCTCCCACCTGGACCTTCTGTTTATCCTTCCAATAGCTGCTGCATTCATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000499425.1 ENST00000519144.5 ENST00000521483.1 ENST00000523786.5 ENST00000665904.1 |
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| CDS TCA 90 bp | GACATGAGGTGCCAGGAGCCACAGGGCAGGGCAGTTTTATTGTGGTaGTTCTGTGTTAGTGACAATGCTGAGTCAGTGTGTCACTTTCAA | + |
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Preference number: 5 (lower is better) Translates to: DMRCQEPQGRAVLLW*FCVSDNAESVCHFQ Trigger: TTGAAAGTGACACACTGACTCAGCATTGTCACTAACACAGAATCACCACAATAAAACTGCCCTGCCCTGTGGCTCCTGGCACCTCATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499425.1 ENST00000665904.1 |
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| CDS TCA 90 bp | GTCCGTTGTTTTGGATTGAGTTCCATACTTGGCTGGCCCAGAGGTTaGTCTCACCACCATTCAGATATCCAAGAAGAAGCCACCTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: VRCFGLSSILGWPRG*SHHHSDIQEEATLV Trigger: CACCAAGGTGGCTTCTTCTTGGATATCTGAATGGTGGTGAGATCAACCTCTGGGCCAGCCAAGTATGGAACTCAATCCAAAACAACGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519144.5 |
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| CDS GCA 90 bp | TTGAAACACGAAAGGCTGGAAGTGTCATTAGCTGGGAAGGATGAATaGAGCAGCTATTGGAAGGATAAACAGAAGGTCCAGGTGGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: LKHERLEVSLAGKDE*SSYWKDKQKVQVGA Trigger: GGCTCCCACCTGGACCTTCTGTTTATCCTTCCAATAGCTGCTGCATTCATCCTTCCCAGCTAATGACACTTCCAGCCTTTCGTGTTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000499425.1 ENST00000519144.5 ENST00000521483.1 ENST00000523786.5 ENST00000665904.1 |
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| CDS GCA 90 bp | AGCTTTTGCTCAGAAGTTCTGCAAATACCTGAAGGGATTTCAGCTTaGTCACCACCTCTCCTACACACCCCTGTCAAATGGCATGGACTG | + |
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Preference number: 5 (lower is better) Translates to: SFCSEVLQIPEGISA*SPPLLHTPVKWHGL Trigger: CAGTCCATGCCATTTGACAGGGGTGTGTAGGAGAGGTGGTGAGCAAGCTGAAATCCCTTCAGGTATTTGCAGAACTTCTGAGCAAAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000499425.1 ENST00000665904.1 |
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| CDS TCA 90 bp | GTCCGTTGTTTTGGATTGAGTTCCATACTTGGCTGGCCCAGAGGTTaGTCTCACCACCATTCAGATATCCAAGAAGAAGCCACAATATCT | + |
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Preference number: 5 (lower is better) Translates to: VRCFGLSSILGWPRG*SHHHSDIQEEATIS Trigger: AGATATTGTGGCTTCTTCTTGGATATCTGAATGGTGGTGAGATCAACCTCTGGGCCAGCCAAGTATGGAACTCAATCCAAAACAACGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653444.1 |
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| CDS TCA 90 bp | AATGTGGGATTTTATGTGCCACTGGAACATAGGCAACATCTAATGTaGAACGGCTTCTGCTTCAAACAGAGGGCCACTATTTTGCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: NVGFYVPLEHRQHLM*NGFCFKQRATILPS Trigger: AGAGGGCAAAATAGTGGCCCTCTGTTTGAAGCAGAAGCCGTTTCACATTAGATGTTGCCTATGTTCCAGTGGCACATAAAATCCCACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653444.1 |
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| CDS CCA 90 bp | ACACGAAACAAAAGAAGTCCGTTGTTTTGGATTGAGTTCCATACTTaGCTGGCCCAGAGGTTGATCTCACCACCATTCAGATATCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: TRNKRSPLFWIEFHT*LAQRLISPPFRYPR Trigger: TCTTGGATATCTGAATGGTGGTGAGATCAACCTCTGGGCCAGCCAAGTATGGAACTCAATCCAAAACAACGGACTTCTTTTGTTTCGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653444.1 |
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| CDS TCA 90 bp | AGTACTATCTGCTCCATAGAAACCTGGAATCTTTTGCAAAGTCCGTaGTACTTTGAAACACGAAAGGCTGGAAGTGTCATTAGCTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: STICSIETWNLLQSP*YFETRKAGSVISWE Trigger: TTCCCAGCTAATGACACTTCCAGCCTTTCGTGTTTCAAAGTATCACGGACTTTGCAAAAGATTCCAGGTTTCTATGGAGCAGATAGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000499425.1 ENST00000519144.5 ENST00000521483.1 ENST00000523786.5 ENST00000665904.1 |
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| CDS CCA 90 bp | TATAACCTTACTCTGTGGTGTATCTATGCACAACGACTAAAGGAGTaGAAGCTCATTACCAGTAACGTTTTCGAGGACTTTAAAACCAAC | + |
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Preference number: 5 (lower is better) Translates to: YNLTLWCIYAQRLKE*KLITSNVFEDFKTN Trigger: GTTGGTTTTAAAGTCCTCGAAAACGTTACTGGTAATGAGCTTCCACTCCTTTAGTCGTTGTGCATAGATACACCACAGAGTAAGGTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000499425.1 ENST00000665904.1 |
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| CDS GCA 72 bp | GAGGGTGGGCAAGGCTGCACCCTGGGGGCTGGTCCTTaGTCAGAGCCTCTCTGTAGCTTAGGGGGAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: EGGQGCTLGAGP*SEPLCSLGGGC Trigger: GCAGCCTCCCCCTAAGCTACAGAGAGGCTCTGAGCAAGGACCAGCCCCCAGGGTGCAGCCTTGCCCACCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000499425.1 ENST00000665904.1 |
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| CDS CCA 72 bp | TGCTCTCTAGAGCCACCCCATCTGCTCTGGAGCCTGTaGAGGGTGGGCAAGGCTGCACCCTGGGGGCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: CSLEPPHLLWSL*RVGKAAPWGLV Trigger: GACCAGCCCCCAGGGTGCAGCCTTGCCCACCCTCCACAGGCTCCAGAGCAGATGGGGTGGCTCTAGAGAGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000499425.1 ENST00000665904.1 |
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| CDS GCA 72 bp | GCCCCGGTCTCTGTGCTTTTAGCAGCTCAGCCCAGCTaGTTCTCGGCCACCCTTGCGACATCATCTTCCATC | + |
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Preference number: 6 (lower is better) Translates to: APVSVLLAAQPS*FSATLATSSSI Trigger: GATGGAAGATGATGTCGCAAGGGTGGCCGAGAAGCAGCTGGGCTGAGCTGCTAAAAGCACAGAGACCGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000499425.1 ENST00000518943.1 ENST00000523664.1 ENST00000524338.1 ENST00000665904.1 |
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| CDS GCA 72 bp | AGGCCAGTCTCTCACTTCACCTCCATGAGCACGGGCTaGACTGCTGGTGTGAACCATGGCAGGACTGATGCC | + |
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Preference number: 6 (lower is better) Translates to: RPVSHFTSMSTG*TAGVNHGRTDA Trigger: GGCATCAGTCCTGCCATGGTTCACACCAGCAGTGCAGCCCGTGCTCATGGAGGTGAAGTGAGAGACTGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521483.1 |
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| CDS CAA 90 bp | TCCTGTCAACTGGGCTCCACCTCCGCTTCTCTGTATGTGTCACTCTaGCAGGCCAGTCTCTCACTTCACCTCCATGAGCACGGGCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: SCQLGSTSASLYVSL*QASLSLHLHEHGLH Trigger: GTGCAGCCCGTGCTCATGGAGGTGAAGTGAGAGACTGGCCTGCAAGAGTGACACATACAGAGAAGCGGAGGTGGAGCCCAGTTGACAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521483.1 |
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| CDS CAA 72 bp | CTGGGCTCCACCTCCGCTTCTCTGTATGTGTCACTCTaGCAGGCCAGTCTCTCACTTCACCTCCATGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LGSTSASLYVSL*QASLSLHLHEH Trigger: GTGCTCATGGAGGTGAAGTGAGAGACTGGCCTGCAAGAGTGACACATACAGAGAAGCGGAGGTGGAGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521483.1 |
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| CDS TCA 72 bp | CACGGGCTGCACTGCTGGTGTGAACCATGGCAGGACTaGTGCCTGAAGTTACCCAGCTGGTACTTAGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: HGLHCWCEPWQD*CLKLPSWYLVE Trigger: TTCCACTAAGTACCAGCTGGGTAACTTCAGGCATCAGTCCTGCCATGGTTCACACCAGCAGTGCAGCCCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521483.1 |
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| CDS GCA 72 bp | CCTTGCTCAGAGCCTCTCTGTAGCTTAGGGGGAGGCTaGACCTTGTTCCAAAGCAACACAGACCTCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PCSEPLCSLGGG*TLFQSNTDLSL Trigger: CAGAGAGAGGTCTGTGTTGCTTTGGAACAAGGTGCAGCCTCCCCCTAAGCTACAGAGAGGCTCTGAGCAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000499425.1 ENST00000665904.1 |
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| CDS CCA 72 bp | AGAAGCATGGACCTCCAGGGCCTGAAGTTACCCAGCTaGTACTTAGTGGAAGCAGGATTTCAGGCTGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: RSMDLQGLKLPS*YLVEAGFQAEE Trigger: CTCCTCAGCCTGAAATCCTGCTTCCACTAAGTACCAGCTGGGTAACTTCAGGCCCTGGAGGTCCATGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518943.1 |
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| CDS CCA 72 bp | GCAGCAGCTATTGGAAGGATAAACAGAAGGTCCAGGTaGGAGCCGATTCTCCAAGGAGCTCGCTTCTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: AAAIGRINRRSR*EPILQGARFFG Trigger: ACCAAAGAAGCGAGCTCCTTGGAGAATCGGCTCCCACCTGGACCTTCTGTTTATCCTTCCAATAGCTGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000499425.1 ENST00000519144.5 ENST00000521483.1 ENST00000523786.5 ENST00000665904.1 |
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| CDS CAA 72 bp | TCAGAGCCTCTCTGTAGCTTAGGGGGAGGCTGCACCTaGTTCCAAAGCAACACAGACCTCTCTCTGCTTAAC | + |
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Preference number: 6 (lower is better) Translates to: SEPLCSLGGGCT*FQSNTDLSLLN Trigger: GTTAAGCAGAGAGAGGTCTGTGTTGCTTTGGAACAAGGTGCAGCCTCCCCCTAAGCTACAGAGAGGCTCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000499425.1 ENST00000665904.1 |
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| CDS CAA 90 bp | GGTCCTTGCTCAGAGCCTCTCTGTAGCTTAGGGGGAGGCTGCACCTaGTTCCAAAGCAACACAGACCTCTCTCTGCTTAACCTAAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: GPCSEPLCSLGGGCT*FQSNTDLSLLNLKR Trigger: TCTCTTTAGGTTAAGCAGAGAGAGGTCTGTGTTGCTTTGGAACAAGGTGCAGCCTCCCCCTAAGCTACAGAGAGGCTCTGAGCAAGGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000499425.1 ENST00000665904.1 |
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| CDS CCA 72 bp | GTGTCATTAGCTGGGAAGGATGAATGCAGCAGCTATTaGAAGGATAAACAGAAGGTCCAGGTGGGAGCCGAT | + |
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Preference number: 6 (lower is better) Translates to: VSLAGKDECSSY*KDKQKVQVGAD Trigger: ATCGGCTCCCACCTGGACCTTCTGTTTATCCTTCCAATAGCTGCTGCATTCATCCTTCCCAGCTAATGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000499425.1 ENST00000519144.5 ENST00000521483.1 ENST00000523786.5 ENST00000665904.1 |
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| CDS CCA 72 bp | CTGAAACTGAGCACAGAAGACCTGAAGTTACCCAGCTaGTACTTAGTGGAAGCAGGATTTCAGGCTGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LKLSTEDLKLPS*YLVEAGFQAEE Trigger: CTCCTCAGCCTGAAATCCTGCTTCCACTAAGTACCAGCTGGGTAACTTCAGGTCTTCTGTGCTCAGTTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523664.1 |
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| CDS CAA 90 bp | CTGAGACATGTTAAAGCTCTATTTAGCGCTAGAAGTTTTGACCATTaGCTCTCTAGAGCCACCCCATCTGCTCTGGAGCCTGTGGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: LRHVKALFSARSFDH*LSRATPSALEPVEG Trigger: ACCCTCCACAGGCTCCAGAGCAGATGGGGTGGCTCTAGAGAGCAAATGGTCAAAACTTCTAGCGCTAAATAGAGCTTTAACATGTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000499425.1 ENST00000665904.1 |
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| CDS GCA 72 bp | TCAGAAGTTCTGCAAATACCTGAAGGGATTTCAGCTTaGTCACCACCTCTCCTACACACCCCTGTCAAATGG | + |
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Preference number: 6 (lower is better) Translates to: SEVLQIPEGISA*SPPLLHTPVKW Trigger: CCATTTGACAGGGGTGTGTAGGAGAGGTGGTGAGCAAGCTGAAATCCCTTCAGGTATTTGCAGAACTTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499425.1 ENST00000665904.1 |
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| CDS CAA 72 bp | AGAAGTCTGAAGTGGGTTAAGGTTCCAGTTCTCTTCTaGAGGAGTCTTCTGTCTTCCTGGTCCCAAACGCAG | + |
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Preference number: 6 (lower is better) Translates to: RSLKWVKVPVLF*RSLLSSWSQTQ Trigger: CTGCGTTTGGGACCAGGAAGACAGAAGACTCCTCAAGAAGAGAACTGGAACCTTAACCCACTTCAGACTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000499425.1 ENST00000518943.1 ENST00000519144.5 ENST00000521483.1 ENST00000523664.1 ENST00000523786.5 ENST00000524338.1 ENST00000665904.1 |
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| CDS CAA 90 bp | AGTCCGTTGTTTTGGATTGAGTTCCATACTTGGCTGGCCCAGAGGTaGATCTCACCACCATTCAGATATCCAAGAAGAAGCCACCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: SPLFWIEFHTWLAQR*ISPPFRYPRRSHLG Trigger: ACCAAGGTGGCTTCTTCTTGGATATCTGAATGGTGGTGAGATCAACCTCTGGGCCAGCCAAGTATGGAACTCAATCCAAAACAACGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519144.5 |
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| CDS GCA 72 bp | GAAAGGCTGGAAGTGTCATTAGCTGGGAAGGATGAATaGAGCAGCTATTGGAAGGATAAACAGAAGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: ERLEVSLAGKDE*SSYWKDKQKVQ Trigger: CTGGACCTTCTGTTTATCCTTCCAATAGCTGCTGCATTCATCCTTCCCAGCTAATGACACTTCCAGCCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000499425.1 ENST00000519144.5 ENST00000521483.1 ENST00000523786.5 ENST00000665904.1 |
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| CDS GCA 72 bp | TTAAAGCTCTATTTAGCGCTAGAAGTTTTGACCATTTaGTCTCTAGAGCCACCCCATCTGCTCTGGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LKLYLALEVLTI*SLEPPHLLWSL Trigger: CAGGCTCCAGAGCAGATGGGGTGGCTCTAGAGAGCAAATGGTCAAAACTTCTAGCGCTAAATAGAGCTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000499425.1 ENST00000665904.1 |
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| CDS CCA 72 bp | AGCTTTTCAGCTTCTGGAGAAACATTTCCTGTCAACTaGGCTCCACCTGAAGTTACCCAGCTGGTACTTAGT | + |
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Preference number: 6 (lower is better) Translates to: SFSASGETFPVN*APPEVTQLVLS Trigger: ACTAAGTACCAGCTGGGTAACTTCAGGTGGAGCCCAGTTGACAGGAAATGTTTCTCCAGAAGCTGAAAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000499425.1 ENST00000524338.1 ENST00000665904.1 |
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| CDS CAA 72 bp | GTTAAAGCTCTATTTAGCGCTAGAAGTTTTGACCATTaGCTCTCTAGAGCCACCCCATCTGCTCTGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: VKALFSARSFDH*LSRATPSALEP Trigger: AGGCTCCAGAGCAGATGGGGTGGCTCTAGAGAGCAAATGGTCAAAACTTCTAGCGCTAAATAGAGCTTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000499425.1 ENST00000665904.1 |
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| CDS CAA 90 bp | AGTCCGTTGTTTTGGATTGAGTTCCATACTTGGCTGGCCCAGAGGTaGATCTCACCACCATTCAGATATCCAAGAAGAAGCCACAATATC | + |
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Preference number: 6 (lower is better) Translates to: SPLFWIEFHTWLAQR*ISPPFRYPRRSHNI Trigger: GATATTGTGGCTTCTTCTTGGATATCTGAATGGTGGTGAGATCAACCTCTGGGCCAGCCAAGTATGGAACTCAATCCAAAACAACGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653444.1 |
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| CDS TCA 72 bp | CAGAGTTTAGAAGCGCTGCTCTTTTACCACTTTGGATaGTTCCTACACTTCCTGGGAGGGAAGGATGACAAT | + |
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Preference number: 6 (lower is better) Translates to: QSLEALLFYHFG*FLHFLGGKDDN Trigger: ATTGTCATCCTTCCCTCCCAGGAAGTGTAGGAATCATCCAAAGTGGTAAAAGAGCAGCGCTTCTAAACTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499425.1 ENST00000665904.1 |
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| CDS CAA 72 bp | CAGATATCCAAGAAGAAGCCACAATATCTCTCACCCTaGGTAACAGAGGGGAGGGGTTCATATGTTGACATC | + |
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Preference number: 6 (lower is better) Translates to: QISKKKPQYLSP*VTEGRGSYVDI Trigger: GATGTCAACATATGAACCCCTCCCCTCTGTTACCAAGGGTGAGAGATATTGTGGCTTCTTCTTGGATATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653444.1 |
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| CDS CAA 90 bp | GTAGAAGTGGATCACCATAAAGGTCTTCATCCTCATCATCTTATGTaGAGTAGGCTGAAGTTACCCAGCTGGTACTTAGTGGAAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: VEVDHHKGLHPHHLM*SRLKLPSWYLVEAG Trigger: TCCTGCTTCCACTAAGTACCAGCTGGGTAACTTCAGCCTACTCAACATAAGATGATGAGGATGAAGACCTTTATGGTGATCCACTTCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523786.5 |
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| CDS TCA 72 bp | TTTTATGTGCCACTGGAACATAGGCAACATCTAATGTaGAACGGCTTCTGCTTCAAACAGAGGGCCACTATT | + |
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Preference number: 6 (lower is better) Translates to: FYVPLEHRQHLM*NGFCFKQRATI Trigger: AATAGTGGCCCTCTGTTTGAAGCAGAAGCCGTTTCACATTAGATGTTGCCTATGTTCCAGTGGCACATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653444.1 |
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| CDS CCA 72 bp | ACTCTGTGGTGTATCTATGCACAACGACTAAAGGAGTaGAAGCTCATTACCAGTAACGTTTTCGAGGACTTT | + |
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Preference number: 6 (lower is better) Translates to: TLWCIYAQRLKE*KLITSNVFEDF Trigger: AAAGTCCTCGAAAACGTTACTGGTAATGAGCTTCCACTCCTTTAGTCGTTGTGCATAGATACACCACAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499425.1 ENST00000665904.1 |
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| CDS CAA 72 bp | GATCACCATAAAGGTCTTCATCCTCATCATCTTATGTaGAGTAGGCTGAAGTTACCCAGCTGGTACTTAGTG | + |
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Preference number: 6 (lower is better) Translates to: DHHKGLHPHHLM*SRLKLPSWYLV Trigger: CACTAAGTACCAGCTGGGTAACTTCAGCCTACTCAACATAAGATGATGAGGATGAAGACCTTTATGGTGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523786.5 |
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| CDS TCA 72 bp | TGCTCCATAGAAACCTGGAATCTTTTGCAAAGTCCGTaGTACTTTGAAACACGAAAGGCTGGAAGTGTCATT | + |
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Preference number: 6 (lower is better) Translates to: CSIETWNLLQSP*YFETRKAGSVI Trigger: AATGACACTTCCAGCCTTTCGTGTTTCAAAGTATCACGGACTTTGCAAAAGATTCCAGGTTTCTATGGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000499425.1 ENST00000519144.5 ENST00000521483.1 ENST00000523786.5 ENST00000665904.1 |
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| CDS TCA 72 bp | CCTCACTGGAAAATACAGTCTGTTAGTGAGTGCTGGTaGTACAACTTACCCCAAAGGAACAAGTTCAAATTC | + |
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Preference number: 6 (lower is better) Translates to: PHWKIQSVSECW*YNLPQRNKFKF Trigger: GAATTTGAACTTGTTCCTTTGGGGTAAGTTGTATCACCAGCACTCACTAACAGACTGTATTTTCCAGTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665904.1 |
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| CDS CCA 72 bp | TGCTCTTTTACCACTTTGGATGATTCCTACACTTCCTaGGAGGGAAGGATGACAATAGTCATATTGAATTTG | + |
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Preference number: 6 (lower is better) Translates to: CSFTTLDDSYTS*EGRMTIVILNL Trigger: CAAATTCAATATGACTATTGTCATCCTTCCCTCCCAGGAAGTGTAGGAATCATCCAAAGTGGTAAAAGAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499425.1 ENST00000665904.1 |
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