Pregenerated sensors for LINC00967 (Homo sapiens)
Ensembl gene IDs: ENSG00000253138Ensembl transcript IDs: ENST00000517689.1, ENST00000517725.1, ENST00000518035.5, ENST00000518412.1
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGCTCTGAGGAGGCTTTCGGGCGACACCCAGGTGCCAGGCTGGTGTaGGAGAGTCGCATGACTGGGCTGCTAAAGGCACTGGATCCTAGG | + |
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Preference number: 5 (lower is better) Translates to: SSEEAFGRHPGARLV*ESRMTGLLKALDPR Trigger: CCTAGGATCCAGTGCCTTTAGCAGCCCAGTCATGCGACTCTCTCACACCAGCCTGGCACCTGGGTGTCGCCCGAAAGCCTCCTCAGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS GCA 90 bp | ACCCCAACCATCTCCACCGCAGTTGGACTGACAGGCAGCAGGTGGTaGTCATCAAAGACAGCTCTGAGGAGGCTTTCGGGCGACACCCAG | + |
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Preference number: 5 (lower is better) Translates to: TPTISTAVGLTGSRW*SSKTALRRLSGDTQ Trigger: CTGGGTGTCGCCCGAAAGCCTCCTCAGAGCTGTCTTTGATGAGCACCACCTGCTGCCTGTCAGTCCAACTGCGGTGGAGATGGTTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS CCA 90 bp | TTGACCCCAACCATCTCCACCGCAGTTGGACTGACAGGCAGCAGGTaGTGCTCATCAAAGACAGCTCTGAGGAGGCTTTCGGGCGACACC | + |
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Preference number: 5 (lower is better) Translates to: LTPTISTAVGLTGSR*CSSKTALRRLSGDT Trigger: GGTGTCGCCCGAAAGCCTCCTCAGAGCTGTCTTTGATGAGCACCACCTGCTGCCTGTCAGTCCAACTGCGGTGGAGATGGTTGGGGTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS GCA 90 bp | CTTGCATGGACACAAGGGCCCTACATTGAGCTATCTCTTTCTTGGTaGCCCCAACCCCATTCTGACCAGGCTCACCTCACTCACTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LAWTQGPYIELSLSW*PQPHSDQAHLTHSA Trigger: TGCTGAGTGAGTGAGGTGAGCCTGGTCAGAATGGGGTTGGGGGCACCAAGAAAGAGATAGCTCAATGTAGGGCCCTTGTGTCCATGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS CCA 90 bp | CTAAGAGCCCCTCACTCACTCAGCACCAGGGGGTCAGCCCATATGTaGGAGAATGAGTGCCTCACCAGTACAATGCTCTTTGATCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LRAPHSLSTRGSAHM*ENECLTSTMLFDQE Trigger: CTCCTGATCAAAGAGCATTGTACTGGTGAGGCACTCATTCTCCCACATATGGGCTGACCCCCTGGTGCTGAGTGAGTGAGGGGCTCTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000517725.1 ENST00000518412.1 |
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| CDS CCA 90 bp | AAACTTGCATGGACACAAGGGCCCTACATTGAGCTATCTCTTTCTTaGTGCCCCCAACCCCATTCTGACCAGGCTCACCTCACTCACTCA | + |
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Preference number: 5 (lower is better) Translates to: KLAWTQGPYIELSLS*CPQPHSDQAHLTHS Trigger: TGAGTGAGTGAGGTGAGCCTGGTCAGAATGGGGTTGGGGGCACCAAGAAAGAGATAGCTCAATGTAGGGCCCTTGTGTCCATGCAAGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS TCA 90 bp | GGAGAGTTGATGTGGCTTCAGGGGCTTGACACTGCTTTGGGGATGTaGATGAAACTTGCATGGACACAAGGGCCCTACATTGAGCTATCT | + |
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Preference number: 5 (lower is better) Translates to: GELMWLQGLDTALGM*MKLAWTQGPYIELS Trigger: AGATAGCTCAATGTAGGGCCCTTGTGTCCATGCAAGTTTCATTCACATCCCCAAAGCAGTGTCAAGCCCCTGAAGCCACATCAACTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS TCA 90 bp | CCTAGTGCTTCCTCTAAGAACAGCACACAGCTCATTCAGTTTTGCTaGTTTTCATCCTCTGCATCCACAAAGCACACTGAGGTCTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PSASSKNSTQLIQFC*FSSSASTKHTEVSP Trigger: AGGAGAGACCTCAGTGTGCTTTGTGGATGCAGAGGATGAAAATCAGCAAAACTGAATGAGCTGTGTGCTGTTCTTAGAGGAAGCACTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS TCA 90 bp | TTCACCTATTCATTTTTATCTTCACCTCTAGCACAGGCTCCATTCTaGGCTCCGCTTCTTCTTCTATGGAATGTGGATAATCACTTCTAC | + |
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Preference number: 5 (lower is better) Translates to: FTYSFLSSPLAQAPF*APLLLLWNVDNHFY Trigger: GTAGAAGTGATTATCCACATTCCATAGAAGAAGAAGCGGAGCTCAGAATGGAGCCTGTGCTAGAGGTGAAGATAAAAATGAATAGGTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517689.1 |
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| CDS GCA 90 bp | ACTTTTTATCAGACCCAGCACATCAACACATCGCCACCTACAAAGTaGTTGCTTTTGGGAAACATCTTTCTTTACTTCTCAGAAGAATCC | + |
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Preference number: 5 (lower is better) Translates to: TFYQTQHINTSPPTK*LLLGNIFLYFSEES Trigger: GGATTCTTCTGAGAAGTAAAGAAAGATGTTTCCCAAAAGCAAGCACTTTGTAGGTGGCGATGTGTTGATGTGCTGGGTCTGATAAAAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517689.1 |
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| CDS TCA 72 bp | GAGGCTTTCGGGCGACACCCAGGTGCCAGGCTGGTGTaGGAGAGTCGCATGACTGGGCTGCTAAAGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: EAFGRHPGARLV*ESRMTGLLKAL Trigger: CAGTGCCTTTAGCAGCCCAGTCATGCGACTCTCTCACACCAGCCTGGCACCTGGGTGTCGCCCGAAAGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS CCA 72 bp | ACCATCTCCACCGCAGTTGGACTGACAGGCAGCAGGTaGTGCTCATCAAAGACAGCTCTGAGGAGGCTTTCG | + |
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Preference number: 6 (lower is better) Translates to: TISTAVGLTGSR*CSSKTALRRLS Trigger: CGAAAGCCTCCTCAGAGCTGTCTTTGATGAGCACCACCTGCTGCCTGTCAGTCCAACTGCGGTGGAGATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS CCA 72 bp | TGGACACAAGGGCCCTACATTGAGCTATCTCTTTCTTaGTGCCCCCAACCCCATTCTGACCAGGCTCACCTC | + |
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Preference number: 6 (lower is better) Translates to: WTQGPYIELSLS*CPQPHSDQAHL Trigger: GAGGTGAGCCTGGTCAGAATGGGGTTGGGGGCACCAAGAAAGAGATAGCTCAATGTAGGGCCCTTGTGTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS CCA 72 bp | CAATGGGGATTTGACCCCAACCATCTCCACCGCAGTTaGACTGACAGGCAGCAGGTGGTGCTCATCAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: QWGFDPNHLHRS*TDRQQVVLIKD Trigger: GTCTTTGATGAGCACCACCTGCTGCCTGTCAGTCCAACTGCGGTGGAGATGGTTGGGGTCAAATCCCCATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS GCA 72 bp | AGCACCAGGGGGTCAGCCCATATGTGGGAGAATGAGTaGCTCACCAGTACAATGCTCTTTGATCAGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: STRGSAHMWENE*LTSTMLFDQEL Trigger: CAGCTCCTGATCAAAGAGCATTGTACTGGTGAGGCACTCATTCTCCCACATATGGGCTGACCCCCTGGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000517725.1 ENST00000518035.5 ENST00000518412.1 |
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| CDS GCA 72 bp | ACACAAGGGCCCTACATTGAGCTATCTCTTTCTTGGTaGCCCCAACCCCATTCTGACCAGGCTCACCTCACT | + |
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Preference number: 6 (lower is better) Translates to: TQGPYIELSLSW*PQPHSDQAHLT Trigger: AGTGAGGTGAGCCTGGTCAGAATGGGGTTGGGGGCACCAAGAAAGAGATAGCTCAATGTAGGGCCCTTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS CCA 72 bp | CCTCACTCACTCAGCACCAGGGGGTCAGCCCATATGTaGGAGAATGAGTGCCTCACCAGTACAATGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: PHSLSTRGSAHM*ENECLTSTMLF Trigger: AAAGAGCATTGTACTGGTGAGGCACTCATTCTCCCACATATGGGCTGACCCCCTGGTGCTGAGTGAGTGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000517725.1 ENST00000518035.5 ENST00000518412.1 |
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| CDS TCA 72 bp | GGCTTCAGGGGCTTGACACTGCTTTGGGGATGTGAATaGAACTTGCATGGACACAAGGGCCCTACATTGAGC | + |
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Preference number: 6 (lower is better) Translates to: GFRGLTLLWGCE*NLHGHKGPTLS Trigger: GCTCAATGTAGGGCCCTTGTGTCCATGCAAGTTTCATTCACATCCCCAAAGCAGTGTCAAGCCCCTGAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS TCA 72 bp | TGCCAGAGATCCAGAAGAGGGACAGCTGCCTGGAGATaGGACCATTCTGAGCTCCGCTTCTTCTTCTATGGA | + |
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Preference number: 6 (lower is better) Translates to: CQRSRRGTAAWR*DHSELRFFFYG Trigger: TCCATAGAAGAAGAAGCGGAGCTCAGAATGGTCTCATCTCCAGGCAGCTGTCCCTCTTCTGGATCTCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS TCA 72 bp | GTGAATGAAACTTGCATGGACACAAGGGCCCTACATTaGGCTATCTCTTTCTTGGTGCCCCCAACCCCATTC | + |
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Preference number: 6 (lower is better) Translates to: VNETCMDTRALH*AISFLVPPTPF Trigger: GAATGGGGTTGGGGGCACCAAGAAAGAGATAGCTCAATGTAGGGCCCTTGTGTCCATGCAAGTTTCATTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS TCA 72 bp | ATGTGGCTTCAGGGGCTTGACACTGCTTTGGGGATGTaGATGAAACTTGCATGGACACAAGGGCCCTACATT | + |
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Preference number: 6 (lower is better) Translates to: MWLQGLDTALGM*MKLAWTQGPYI Trigger: AATGTAGGGCCCTTGTGTCCATGCAAGTTTCATTCACATCCCCAAAGCAGTGTCAAGCCCCTGAAGCCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS TCA 72 bp | ATTCAAGGGCAGAAGGCATCCAGCACAGGGGAAAAGTaGAGGCCGGCAGACTCAACACGTGTTCTTATCTTA | + |
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Preference number: 6 (lower is better) Translates to: IQGQKASSTGEK*RPADSTRVLIL Trigger: TAAGATAAGAACACGTGTTGAGTCTGCCGGCCTTCACTTTTCCCCTGTGCTGGATGCCTTCTGCCCTTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS CAA 90 bp | GAGAACAAGCAGAAAGGGAGAGTTCAAGTGTGCAGGAGAAAGCGGTaGAAAATTTTTGAGAGGGTGGTCCGGGAAGGCCTGAGTGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: ENKQKGRVQVCRRKR*KIFERVVREGLSED Trigger: ATCTTCACTCAGGCCTTCCCGGACCACCCTCTCAAAAATTTTCAACCGCTTTCTCCTGCACACTTGAACTCTCCCTTTCTGCTTGTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517689.1 |
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| CDS TCA 72 bp | AAGTCCAAGAGTCCAAAAGCTGAAGAACTTGGAGTCTaGTATTCAAGGGCAGAAGGCATCCAGCACAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: KSKSPKAEELGV*YSRAEGIQHRG Trigger: TCCCCTGTGCTGGATGCCTTCTGCCCTTGAATATCAGACTCCAAGTTCTTCAGCTTTTGGACTCTTGGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517689.1 ENST00000518035.5 |
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| CDS CAA 72 bp | ACTGGTGTAAGTCCAAGAGTCCAAAAGCTGAAGAACTaGGAGTCTGATATTCAAGGGCAGAAGGCATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TGVSPRVQKLKN*ESDIQGQKASS Trigger: GCTGGATGCCTTCTGCCCTTGAATATCAGACTCCAAGTTCTTCAGCTTTTGGACTCTTGGACTTACACCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517689.1 ENST00000518035.5 |
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| CDS TCA 72 bp | AATGTGGATAATCACTTCTACTTCATGATCACAAGGTaGAGTCCCACAATAGGCCGTCTGCAAGCTGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: NVDNHFYFMITR*SPTIGRLQAEQ Trigger: CTGCTCAGCTTGCAGACGGCCTATTGTGGGACTTCACCTTGTGATCATGAAGTAGAAGTGATTATCCACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000517689.1 ENST00000517725.1 ENST00000518035.5 |
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| CDS TCA 72 bp | AATGTGGATAATCACTTCTATCACATGATCACAAGGTaGAGTCCCACAATAGGCCGTCTGCAAGCTGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: NVDNHFYHMITR*SPTIGRLQAEQ Trigger: CTGCTCAGCTTGCAGACGGCCTATTGTGGGACTTCACCTTGTGATCATGTGATAGAAGTGATTATCCACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518412.1 |
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| CDS TCA 72 bp | AGTATGTGTTCATGCATACACTCACATCCCTGTGTCTaGGTGTTGTGGGTGTGTGTGATGTCTGTGCATTTC | + |
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Preference number: 6 (lower is better) Translates to: SMCSCIHSHPCV*VLWVCVMSVHF Trigger: GAAATGCACAGACATCACACACACCCACAACACTCAGACACAGGGATGTGAGTGTATGCATGAACACATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS CCA 72 bp | AGATTTCCTAGGCTGGAGATGAGAGGAACTTTCTGTTaGGATCACTTTTTATCAGACCCAGCACATCAACAC | + |
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Preference number: 6 (lower is better) Translates to: RFPRLEMRGTFC*DHFLSDPAHQH Trigger: GTGTTGATGTGCTGGGTCTGATAAAAAGTGATCCCAACAGAAAGTTCCTCTCATCTCCAGCCTAGGAAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517689.1 |
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| CDS TCA 72 bp | ACTCACATCCCTGTGTCTGAGTGTTGTGGGTGTGTGTaGTGTCTGTGCATTTCTATGTGGTATGTATTCATA | + |
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Preference number: 6 (lower is better) Translates to: THIPVSECCGCV*CLCISMWYVFI Trigger: TATGAATACATACCACATAGAAATGCACAGACATCACACACACCCACAACACTCAGACACAGGGATGTGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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| CDS CAA 90 bp | TTTTATCAGACCCAGCACATCAACACATCGCCACCTACAAAGTGCTaGCTTTTGGGAAACATCTTTCTTTACTTCTCAGAAGAATCCATG | + |
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Preference number: 6 (lower is better) Translates to: FYQTQHINTSPPTKC*LLGNIFLYFSEESM Trigger: CATGGATTCTTCTGAGAAGTAAAGAAAGATGTTTCCCAAAAGCAAGCACTTTGTAGGTGGCGATGTGTTGATGTGCTGGGTCTGATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517689.1 |
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| CDS GCA 72 bp | GCAACACCCTCACAAACACACTCAGGAACAATACTTTaGATCCTTCAATCCAATCAAGTTGACACTCAATAT | + |
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Preference number: 6 (lower is better) Translates to: ATPSQTHSGTIL*ILQSNQVDTQY Trigger: ATATTGAGTGTCAACTTGATTGGATTGAAGGATGCAAAGTATTGTTCCTGAGTGTGTTTGTGAGGGTGTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518035.5 |
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