Pregenerated sensors for LINC00958 (Homo sapiens)
Ensembl gene IDs: ENSG00000251381Ensembl transcript IDs: ENST00000504230.2, ENST00000526388.2, ENST00000527945.2, ENST00000529328.1, ENST00000531402.6, ENST00000532541.6, ENST00000534477.6, ENST00000653758.1, ENST00000653958.1, ENST00000653981.1, ENST00000658243.1, ENST00000662291.1, ENST00000663902.1, ENST00000667588.1, ENST00000671253.1, ENST00000671577.1
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCACGGGGCAGCCCTTCGAGGGCATCACCATCAAGGGAGTGCCCTaGATCCTCCGTGCTCATGTCCACTCCTTGCCTCTCCCCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: GTGQPFEGITIKGVP*ILRAHVHSLPLPSS Trigger: AGAGGAGGGGAGAGGCAAGGAGTGGACATGAGCACGGAGGATCCAGGGCACTCCCTTGATGGTGATGCCCTCGAAGGGCTGCCCCGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
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| CDS GCA 90 bp | CAATGGGCACGGGGCAGCCCTTCGAGGGCATCACCATCAAGGGAGTaGCCTGGATCCTCCGTGCTCATGTCCACTCCTTGCCTCTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: QWARGSPSRASPSRE*PGSSVLMSTPCLSP Trigger: AGGGGAGAGGCAAGGAGTGGACATGAGCACGGAGGATCCAGGGCACTCCCTTGATGGTGATGCCCTCGAAGGGCTGCCCCGTGCCCATTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
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| CDS TCA 90 bp | CCCTGTTGCCGGTCTTCTCCAGGTGCTGAATCAGCTGCCTTTCGCTaGGTGGCCAGTGGAAGGTTCTCTGCCGGTGGCGGCCTGAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: PCCRSSPGAESAAFR*VASGRFSAGGGLSF Trigger: GAAGCTCAGGCCGCCACCGGCAGAGAACCTTCCACTGGCCACTCAGCGAAAGGCAGCTGATTCAGCACCTGGAGAAGACCGGCAACAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658243.1 |
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| CDS CCA 90 bp | CGCGAGAGCTCTCATGGCGTGGGGTGGAATCCACATTCTGTACAATaGGCACGGGGCAGCCCTTCGAGGGCATCACCATCAAGGGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: RESSHGVGWNPHSVQ*ARGSPSRASPSREC Trigger: GCACTCCCTTGATGGTGATGCCCTCGAAGGGCTGCCCCGTGCCCATTGTACAGAATGTGGATTCCACCCCACGCCATGAGAGCTCTCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
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| CDS GCA 90 bp | CTGGATCCTCCGTGCTCATGTCCACTCCTTGCCTCTCCCCTCCTCTaGAGTGCAAGGAAACTCAGCCCTGTTGCCGGTCTTCTCCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: LDPPCSCPLLASPLL*SARKLSPVAGLLQV Trigger: CACCTGGAGAAGACCGGCAACAGGGCTGAGTTTCCTTGCACTGCAGAGGAGGGGAGAGGCAAGGAGTGGACATGAGCACGGAGGATCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
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| CDS GCA 90 bp | CCATCAAGGGAGTGCCCTGGATCCTCCGTGCTCATGTCCACTCCTTaGCTCTCCCCTCCTCTGCAGTGCAAGGAAACTCAGCCCTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: PSRECPGSSVLMSTP*LSPPLQCKETQPCC Trigger: GCAACAGGGCTGAGTTTCCTTGCACTGCAGAGGAGGGGAGAGGCAAGGAGTGGACATGAGCACGGAGGATCCAGGGCACTCCCTTGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
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| CDS TCA 90 bp | CCCTGTTGCCGGTCTTCTCCAGGTGCTGAATCAGCTGCCTTTCGCTaGGTGGCCAGTGGAAGGTTCTGTGATCCCAGCTACTCAGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: PCCRSSPGAESAAFR*VASGRFCDPSYSGG Trigger: GCCTCCTGAGTAGCTGGGATCACAGAACCTTCCACTGGCCACTCAGCGAAAGGCAGCTGATTCAGCACCTGGAGAAGACCGGCAACAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527945.2 |
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| CDS GCA 90 bp | TCCTCCGTGCTCATGTCCACTCCTTGCCTCTCCCCTCCTCTGCAGTaGAAGGAAACTCAGCCCTGTTGCCGGTCTTCTCCAGGTGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: SSVLMSTPCLSPPLQ*KETQPCCRSSPGAE Trigger: TTCAGCACCTGGAGAAGACCGGCAACAGGGCTGAGTTTCCTTGCACTGCAGAGGAGGGGAGAGGCAAGGAGTGGACATGAGCACGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
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| CDS TCA 90 bp | TGGCCGTTCCGCATGGCTGGGGAGGCCTCAGGAAACTGCAGAGGGTaGGAGGGAAGCAAGCAGTTTCTTCACAATGCAGCAGGAGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: WPFRMAGEASGNCRG*EGSKQFLHNAAGER Trigger: TCTCTCTCCTGCTGCATTGTGAAGAAACTGCTTGCTTCCCTCTCACCCTCTGCAGTTTCCTGAGGCCTCCCCAGCCATGCGGAACGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000526388.2 ENST00000653958.1 ENST00000653981.1 ENST00000662291.1 ENST00000667588.1 |
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| CDS TCA 90 bp | GACCCGTTCCGCATGGCTGGGGAGGCCTCAGGAAACTGCAGAGGGTaGGAGGGAAGCAAGCAGTTTCTTCACAATGCAGCAGGAGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: DPFRMAGEASGNCRG*EGSKQFLHNAAGER Trigger: TCTCTCTCCTGCTGCATTGTGAAGAAACTGCTTGCTTCCCTCTCACCCTCTGCAGTTTCCTGAGGCCTCCCCAGCCATGCGGAACGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527945.2 |
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| CDS TCA 90 bp | CAGGCGTTCCGCATGGCTGGGGAGGCCTCAGGAAACTGCAGAGGGTaGGAGGGAAGCAAGCAGTTTCTTCACAATGCAGCAGGAGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: QAFRMAGEASGNCRG*EGSKQFLHNAAGER Trigger: TCTCTCTCCTGCTGCATTGTGAAGAAACTGCTTGCTTCCCTCTCACCCTCTGCAGTTTCCTGAGGCCTCCCCAGCCATGCGGAACGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000531402.6 ENST00000534477.6 ENST00000663902.1 |
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| CDS TCA 90 bp | CTCCCGTTCCGCATGGCTGGGGAGGCCTCAGGAAACTGCAGAGGGTaGGAGGGAAGCAAGCAGTTTCTTCACAATGCAGCAGGAGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: LPFRMAGEASGNCRG*EGSKQFLHNAAGER Trigger: TCTCTCTCCTGCTGCATTGTGAAGAAACTGCTTGCTTCCCTCTCACCCTCTGCAGTTTCCTGAGGCCTCCCCAGCCATGCGGAACGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658243.1 ENST00000671253.1 |
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| CDS CCA 90 bp | ATGGCTTATAAAGTGGTCTGGGCCTGCGCGAGAGCTCTCATGGCGTaGGGTGGAATCCACATTCTGTACAATGGGCACGGGGCAGCCCTT | + |
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Preference number: 5 (lower is better) Translates to: MAYKVVWACARALMA*GGIHILYNGHGAAL Trigger: AAGGGCTGCCCCGTGCCCATTGTACAGAATGTGGATTCCACCCCACGCCATGAGAGCTCTCGCGCAGGCCCAGACCACTTTATAAGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
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| CDS CCA 90 bp | CCAGACAGAATGGTGGAATGGAACAGCCTGCTGAAGACCTATTCGTaGCACCAGCTGAGAGACAACACGTTCCGCATGGCTGGGGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: PDRMVEWNSLLKTYS*HQLRDNTFRMAGEA Trigger: GGCCTCCCCAGCCATGCGGAACGTGTTGTCTCTCAGCTGGTGCCACGAATAGGTCTTCAGCAGGCTGTTCCATTCCACCATTCTGTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671577.1 |
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| CDS TCA 90 bp | ACAGCGTTCCGCATGGCTGGGGAGGCCTCAGGAAACTGCAGAGGGTaGGAGGGAAGCAAGCAGTTTCTTCACAATGCAGCAGGAGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: TAFRMAGEASGNCRG*EGSKQFLHNAAGER Trigger: TCTCTCTCCTGCTGCATTGTGAAGAAACTGCTTGCTTCCCTCTCACCCTCTGCAGTTTCCTGAGGCCTCCCCAGCCATGCGGAACGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504230.2 ENST00000653758.1 |
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| CDS TCA 90 bp | TTGCTTCTCCTCCTCTCTGGCTGGCAGCCCTTGGGGTGCGAAGCATaGATCCAACCTGGAGCTATCTTGCTGCAAGCTTCCCTGTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: LLLLLSGWQPLGCEA*IQPGAILLQASLLS Trigger: GGACAACAGGGAAGCTTGCAGCAAGATAGCTCCAGGTTGGATTCATGCTTCGCACCCCAAGGGCTGCCAGCCAGAGAGGAGGAGAAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000504230.2 ENST00000526388.2 ENST00000529328.1 ENST00000531402.6 ENST00000532541.6 ENST00000534477.6 ENST00000653758.1 ENST00000653958.1 ENST00000658243.1 ENST00000662291.1 ENST00000663902.1 ENST00000671253.1 ENST00000671577.1 |
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| CDS CCA 90 bp | CCTCTCTGGCTGGCAGCCCTTGGGGTGCGAAGCATGAATCCAACCTaGAGCTATCTTGCTGCAAGCTTCCCTGTTGTCCTGGTCACAAGA | + |
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Preference number: 5 (lower is better) Translates to: PLWLAALGVRSMNPT*SYLAASFPVVLVTR Trigger: TCTTGTGACCAGGACAACAGGGAAGCTTGCAGCAAGATAGCTCCAGGTTGGATTCATGCTTCGCACCCCAAGGGCTGCCAGCCAGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000504230.2 ENST00000526388.2 ENST00000529328.1 ENST00000531402.6 ENST00000532541.6 ENST00000534477.6 ENST00000653758.1 ENST00000653958.1 ENST00000658243.1 ENST00000662291.1 ENST00000663902.1 ENST00000671253.1 ENST00000671577.1 |
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| CDS TCA 90 bp | GAAGAAGCTACCTGGCGTCTGTGTAGTGTTCAGAAACTGCAGGAGTaGTTGCTTCTCCTCCTCTCTGGCTGGCAGCCCTTGGGGTGCGAA | + |
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Preference number: 5 (lower is better) Translates to: EEATWRLCSVQKLQE*LLLLLSGWQPLGCE Trigger: TTCGCACCCCAAGGGCTGCCAGCCAGAGAGGAGGAGAAGCAATCACTCCTGCAGTTTCTGAACACTACACAGACGCCAGGTAGCTTCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000504230.2 ENST00000526388.2 ENST00000529328.1 ENST00000531402.6 ENST00000532541.6 ENST00000534477.6 ENST00000653758.1 ENST00000653958.1 ENST00000658243.1 ENST00000662291.1 ENST00000663902.1 ENST00000671253.1 ENST00000671577.1 |
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| CDS TCA 90 bp | AACACGTTCCGCATGGCTGGGGAGGCCTCAGGAAACTGCAGAGGGTaGGAGGGAAGCAAGCAGTTTCTTCACAATGCAGCAGGAGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: NTFRMAGEASGNCRG*EGSKQFLHNAAGER Trigger: TCTCTCTCCTGCTGCATTGTGAAGAAACTGCTTGCTTCCCTCTCACCCTCTGCAGTTTCCTGAGGCCTCCCCAGCCATGCGGAACGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671577.1 |
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| CDS GCA 90 bp | GGCAGCCCTTGGGGTGCGAAGCATGAATCCAACCTGGAGCTATCTTaGTGCAAGCTTCCCTGTTGTCCTGGTCACAAGAGTCCTCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: GSPWGAKHESNLELS*CKLPCCPGHKSPQL Trigger: CAACTGAGGACTCTTGTGACCAGGACAACAGGGAAGCTTGCAGCAAGATAGCTCCAGGTTGGATTCATGCTTCGCACCCCAAGGGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000504230.2 ENST00000526388.2 ENST00000529328.1 ENST00000531402.6 ENST00000532541.6 ENST00000534477.6 ENST00000653758.1 ENST00000653958.1 ENST00000658243.1 ENST00000662291.1 ENST00000663902.1 ENST00000671253.1 ENST00000671577.1 |
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| CDS CCA 90 bp | AACTGCAGGAGTGATTGCTTCTCCTCCTCTCTGGCTGGCAGCCCTTaGGGTGCGAAGCATGAATCCAACCTGGAGCTATCTTGCTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: NCRSDCFSSSLAGSP*GAKHESNLELSCCK Trigger: CTTGCAGCAAGATAGCTCCAGGTTGGATTCATGCTTCGCACCCCAAGGGCTGCCAGCCAGAGAGGAGGAGAAGCAATCACTCCTGCAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000504230.2 ENST00000526388.2 ENST00000529328.1 ENST00000531402.6 ENST00000532541.6 ENST00000534477.6 ENST00000653758.1 ENST00000653958.1 ENST00000658243.1 ENST00000662291.1 ENST00000663902.1 ENST00000671253.1 ENST00000671577.1 |
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| CDS CCA 90 bp | GAAATATGGCTTATAAAGTGGTCTGGGCCTGCGCGAGAGCTCTCATaGCGTGGGGTGGAATCCACATTCTGTACAATGGGCACGGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: EIWLIKWSGPARELS*RGVESTFCTMGTGQ Trigger: CTGCCCCGTGCCCATTGTACAGAATGTGGATTCCACCCCACGCCATGAGAGCTCTCGCGCAGGCCCAGACCACTTTATAAGCCATATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
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| CDS GCA 90 bp | GTTCTCCTGAAGAAGCTACCTGGCGTCTGTGTAGTGTTCAGAAACTaGAGGAGTGATTGCTTCTCCTCCTCTCTGGCTGGCAGCCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: VLLKKLPGVCVVFRN*RSDCFSSSLAGSPW Trigger: CCAAGGGCTGCCAGCCAGAGAGGAGGAGAAGCAATCACTCCTGCAGTTTCTGAACACTACACAGACGCCAGGTAGCTTCTTCAGGAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000504230.2 ENST00000526388.2 ENST00000529328.1 ENST00000531402.6 ENST00000532541.6 ENST00000534477.6 ENST00000653758.1 ENST00000653958.1 ENST00000658243.1 ENST00000662291.1 ENST00000663902.1 ENST00000671253.1 ENST00000671577.1 |
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| CDS CCA 90 bp | TCTTCTGATGTGTTAATTCCAGGTCTTGGTCTACAGCGTTCCGCATaGCTGGGGAGGCCTCAGGAAACTGCAGAGGGTGAGAGGGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: SSDVLIPGLGLQRSA*LGRPQETAEGEREA Trigger: TGCTTCCCTCTCACCCTCTGCAGTTTCCTGAGGCCTCCCCAGCCATGCGGAACGCTGTAGACCAAGACCTGGAATTAACACATCAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504230.2 ENST00000653758.1 |
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| CDS TCA 90 bp | GGACACTGTGAAGTGCAGGGAGGACCATATTATGTTGATGATGGATaGGTGGATCCCTCTCCACTGAATGTGCCAGGCTGGAGCCCATCC | + |
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Preference number: 5 (lower is better) Translates to: GHCEVQGGPYYVDDG*VDPSPLNVPGWSPS Trigger: GGATGGGCTCCAGCCTGGCACATTCAGTGGAGAGGGATCCACTCATCCATCATCAACATAATATGGTCCTCCCTGCACTTCACAGTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000504230.2 ENST00000526388.2 ENST00000529328.1 ENST00000531402.6 ENST00000532541.6 ENST00000534477.6 ENST00000653758.1 ENST00000653958.1 ENST00000658243.1 ENST00000662291.1 ENST00000663902.1 ENST00000671253.1 ENST00000671577.1 |
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| CDS GCA 90 bp | GCCAGCCATTCACTCCCGGCTCCAGTCCACTACACCCATGGGATCTaGTATCTTAATCTTGTAAGAAGCAGTGGGCCAGACAGAATGGTG | + |
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Preference number: 5 (lower is better) Translates to: ASHSLPAPVHYTHGI*YLNLVRSSGPDRMV Trigger: CACCATTCTGTCTGGCCCACTGCTTCTTACAAGATTAAGATAGCAGATCCCATGGGTGTAGTGGACTGGAGCCGGGAGTGAATGGCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653981.1 |
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| CDS CCA 90 bp | GACAGATCCAGAAACAGGAATTGGTGGGAAATATGGCTTATAAAGTaGTCTGGGCCTGCGCGAGAGCTCTCATGGCGTGGGGTGGAATCC | + |
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Preference number: 5 (lower is better) Translates to: DRSRNRNWWEIWLIK*SGPARELSWRGVES Trigger: GGATTCCACCCCACGCCATGAGAGCTCTCGCGCAGGCCCAGACCACTTTATAAGCCATATTTCCCACCAATTCCTGTTTCTGGATCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
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| CDS GCA 90 bp | AAACAGGAATTGGTGGGAAATATGGCTTATAAAGTGGTCTGGGCCTaGGCGAGAGCTCTCATGGCGTGGGGTGGAATCCACATTCTGTAC | + |
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Preference number: 5 (lower is better) Translates to: KQELVGNMAYKVVWA*ARALMAWGGIHILY Trigger: GTACAGAATGTGGATTCCACCCCACGCCATGAGAGCTCTCGCGCAGGCCCAGACCACTTTATAAGCCATATTTCCCACCAATTCCTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
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| CDS CCA 90 bp | CCAGACAGAATGGTGGAATGGAACAGCCTGCTGAAGACCTATTCGTaGCACCAGTTCTTCCAATTTTGGCATGCTGCTCCTGTCAGCATC | + |
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Preference number: 5 (lower is better) Translates to: PDRMVEWNSLLKTYS*HQFFQFWHAAPVSI Trigger: GATGCTGACAGGAGCAGCATGCCAAAATTGGAAGAACTGGTGCCACGAATAGGTCTTCAGCAGGCTGTTCCATTCCACCATTCTGTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531402.6 |
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| CDS CCA 90 bp | CCAGACAGAATGGTGGAATGGAACAGCCTGCTGAAGACCTATTCGTaGCACCAGCTGAGAGACAACATTCTTCCAATTTTGGCATGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PDRMVEWNSLLKTYS*HQLRDNILPILACC Trigger: GCAGCATGCCAAAATTGGAAGAATGTTGTCTCTCAGCTGGTGCCACGAATAGGTCTTCAGCAGGCTGTTCCATTCCACCATTCTGTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000526388.2 ENST00000532541.6 ENST00000653981.1 ENST00000663902.1 |
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| CDS GCA 90 bp | CTAGCTTCATGTCAGAGTATGTTCATGTCATCCCTCTGCCATTCCTaGAAAGTGGGTATTACCGTTCTCCCCATCCCTTCTCCATCTTGG | + |
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Preference number: 5 (lower is better) Translates to: LASCQSMFMSSLCHS*KVGITVLPIPSPSW Trigger: CCAAGATGGAGAAGGGATGGGGAGAACGGTAATACCCACTTTGCAGGAATGGCAGAGGGATGACATGAACATACTCTGACATGAAGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653981.1 |
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| CDS CCA 90 bp | CATGTCAGAGTATGTTCATGTCATCCCTCTGCCATTCCTGCAAAGTaGGTATTACCGTTCTCCCCATCCCTTCTCCATCTTGGAAACAGA | + |
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Preference number: 5 (lower is better) Translates to: HVRVCSCHPSAIPAK*VLPFSPSLLHLGNR Trigger: TCTGTTTCCAAGATGGAGAAGGGATGGGGAGAACGGTAATACCCACTTTGCAGGAATGGCAGAGGGATGACATGAACATACTCTGACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653981.1 |
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| CDS CCA 90 bp | TGCCATGTCGTCACTTTTACCATATTCGATTGGTCCAACAAACAATaGGGTAGGAGACCACACAGTGTGAATACCAGGAGGCCAGGATCA | + |
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Preference number: 5 (lower is better) Translates to: CHVVTFTIFDWSNKQ*GRRPHSVNTRRPGS Trigger: TGATCCTGGCCTCCTGGTATTCACACTGTGTGGTCTCCTACCCCATTGTTTGTTGGACCAATCGAATATGGTAAAAGTGACGACATGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653981.1 |
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| CDS CCA 90 bp | TTGGTAAAGAAGATCTGGACTGATTTTAATGGACACATCTGGATTTaGGGCTTCTTAGGTGTGGAGGTGGAGACAGGGGCCAGTGGTTAC | + |
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Preference number: 5 (lower is better) Translates to: LVKKIWTDFNGHIWI*GFLGVEVETGASGY Trigger: GTAACCACTGGCCCCTGTCTCCACCTCCACACCTAAGAAGCCCCAAATCCAGATGTGTCCATTAAAATCAGTCCAGATCTTCTTTACCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658243.1 |
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| CDS TCA 90 bp | TATTCGATTGGTCCAACAAACAATGGGGTAGGAGACCACACAGTGTaGATACCAGGAGGCCAGGATCATCACTCAAAATTCATAAGACCC | + |
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Preference number: 5 (lower is better) Translates to: YSIGPTNNGVGDHTV*IPGGQDHHSKFIRP Trigger: GGGTCTTATGAATTTTGAGTGATGATCCTGGCCTCCTGGTATTCACACTGTGTGGTCTCCTACCCCATTGTTTGTTGGACCAATCGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653981.1 |
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| CDS GCA 90 bp | CATAGTGAGGAGAGCTTAAACTTTCTCCTTCTTCCAATTTTGGCATaGTGCTCCTGTCAGCATCCTCTAAGCAATAGTTTGTCTCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: HSEESLNFLLLPILA*CSCQHPLSNSLSPW Trigger: CCAGGGAGACAAACTATTGCTTAGAGGATGCTGACAGGAGCAGCATGCCAAAATTGGAAGAAGGAGAAAGTTTAAGCTCTCCTCACTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000534477.6 ENST00000662291.1 |
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| CDS CCA 90 bp | TTAAATTTAGTTTTATCCCTAGAATGTGATCACCCTACTGCAGATTaGCACATCACTCGCAGTAATGTCCCTGGTCCCTGGGAGACATGC | + |
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Preference number: 5 (lower is better) Translates to: LNLVLSLECDHPTAD*HITRSNVPGPWETC Trigger: GCATGTCTCCCAGGGACCAGGGACATTACTGCGAGTGATGTGCCAATCTGCAGTAGGGTGATCACATTCTAGGGATAAAACTAAATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653981.1 |
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| CDS GCA 90 bp | TTTTGTTGTTGCAGGTTTTCAGCTCCGGCATGGGCTTCCCTATTCTaGTGTGAAATTAATATGACATCTAGTGGCTTGGTAAAGAAGATC | + |
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Preference number: 5 (lower is better) Translates to: FCCCRFSAPAWASLF*CEINMTSSGLVKKI Trigger: GATCTTCTTTACCAAGCCACTAGATGTCATATTAATTTCACAGCAGAATAGGGAAGCCCATGCCGGAGCTGAAAACCTGCAACAACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658243.1 |
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| CDS TCA 90 bp | GTGTTTAGACCTTCAAATATAGGGCCTCTATGTCCATGTCTTTCATaGACTGTTTTTCTTTGCACAATCTCAGGCTTCTCTAACAATATT | + |
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Preference number: 5 (lower is better) Translates to: VFRPSNIGPLCPCLS*TVFLCTISGFSNNI Trigger: AATATTGTTAGAGAAGCCTGAGATTGTGCAAAGAAAAACAGTTCATGAAAGACATGGACATAGAGGCCCTATATTTGAAGGTCTAAACAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653981.1 |
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| CDS CCA 72 bp | GGTCTGGGCCTGCGCGAGAGCTCTCATGGCGTGGGGTaGAATCCACATTCTGTACAATGGGCACGGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GLGLRESSHGVG*NPHSVQWARGS Trigger: GCTGCCCCGTGCCCATTGTACAGAATGTGGATTCCACCCCACGCCATGAGAGCTCTCGCGCAGGCCCAGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
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| CDS TCA 72 bp | CGGTCTTCTCCAGGTGCTGAATCAGCTGCCTTTCGCTaGGTGGCCAGTGGAAGGTTCTCTGCCGGTGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: RSSPGAESAAFR*VASGRFSAGGG Trigger: GCCGCCACCGGCAGAGAACCTTCCACTGGCCACTCAGCGAAAGGCAGCTGATTCAGCACCTGGAGAAGACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658243.1 |
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| CDS GCA 72 bp | GGGCATCACCATCAAGGGAGTGCCCTGGATCCTCCGTaGTCATGTCCACTCCTTGCCTCTCCCCTCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GHHHQGSALDPP*SCPLLASPLLC Trigger: GCAGAGGAGGGGAGAGGCAAGGAGTGGACATGAGCACGGAGGATCCAGGGCACTCCCTTGATGGTGATGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
||
| CDS CCA 72 bp | CAGCCCTTCGAGGGCATCACCATCAAGGGAGTGCCCTaGATCCTCCGTGCTCATGTCCACTCCTTGCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: QPFEGITIKGVP*ILRAHVHSLPL Trigger: GAGAGGCAAGGAGTGGACATGAGCACGGAGGATCCAGGGCACTCCCTTGATGGTGATGCCCTCGAAGGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
||
| CDS GCA 72 bp | CCGTGCTCATGTCCACTCCTTGCCTCTCCCCTCCTCTaGAGTGCAAGGAAACTCAGCCCTGTTGCCGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PCSCPLLASPLL*SARKLSPVAGL Trigger: AAGACCGGCAACAGGGCTGAGTTTCCTTGCACTGCAGAGGAGGGGAGAGGCAAGGAGTGGACATGAGCACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
||
| CDS GCA 72 bp | GAGTGCCCTGGATCCTCCGTGCTCATGTCCACTCCTTaGCTCTCCCCTCCTCTGCAGTGCAAGGAAACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ECPGSSVLMSTP*LSPPLQCKETQ Trigger: CTGAGTTTCCTTGCACTGCAGAGGAGGGGAGAGGCAAGGAGTGGACATGAGCACGGAGGATCCAGGGCACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
||
| CDS CCA 72 bp | AAAGTGGTCTGGGCCTGCGCGAGAGCTCTCATGGCGTaGGGTGGAATCCACATTCTGTACAATGGGCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: KVVWACARALMA*GGIHILYNGHG Trigger: CCCGTGCCCATTGTACAGAATGTGGATTCCACCCCACGCCATGAGAGCTCTCGCGCAGGCCCAGACCACTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
||
| CDS TCA 72 bp | CTCCTCTCTGGCTGGCAGCCCTTGGGGTGCGAAGCATaGATCCAACCTGGAGCTATCTTGCTGCAAGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLSGWQPLGCEA*IQPGAILLQAS Trigger: GGAAGCTTGCAGCAAGATAGCTCCAGGTTGGATTCATGCTTCGCACCCCAAGGGCTGCCAGCCAGAGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000504230.2 ENST00000526388.2 ENST00000529328.1 ENST00000531402.6 ENST00000532541.6 ENST00000534477.6 ENST00000653758.1 ENST00000653958.1 ENST00000658243.1 ENST00000662291.1 ENST00000663902.1 ENST00000671253.1 ENST00000671577.1 |
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| CDS TCA 72 bp | GGAAACTCAGCCCTGTTGCCGGTCTTCTCCAGGTGCTaGATCAGCTGCCTTTCGCTGAGTGGCCAGTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GNSALLPVFSRC*ISCLSLSGQWK Trigger: CTTCCACTGGCCACTCAGCGAAAGGCAGCTGATTCAGCACCTGGAGAAGACCGGCAACAGGGCTGAGTTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
||
| CDS CCA 72 bp | TCTCATGGCGTGGGGTGGAATCCACATTCTGTACAATaGGCACGGGGCAGCCCTTCGAGGGCATCACCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SHGVGWNPHSVQ*ARGSPSRASPS Trigger: TGATGGTGATGCCCTCGAAGGGCTGCCCCGTGCCCATTGTACAGAATGTGGATTCCACCCCACGCCATGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
||
| CDS CCA 72 bp | CAAGGCAGTTTACGATATGGAAGCAGGCGTTCCGCATaGCTGGGGAGGCCTCAGGAAACTGCAGAGGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: QGSLRYGSRRSA*LGRPQETAEGE Trigger: CTCACCCTCTGCAGTTTCCTGAGGCCTCCCCAGCCATGCGGAACGCCTGCTTCCATATCGTAAACTGCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000531402.6 ENST00000534477.6 ENST00000663902.1 |
||
| CDS CCA 72 bp | GATTGGCACATCACTCGCAGTAATGTCCCTGGTCCCTaGGAGACATGCACGCCAGTCTGCCGGTGTTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: DWHITRSNVPGP*ETCTPVCRCLS Trigger: GGACAAACACCGGCAGACTGGCGTGCATGTCTCCCAGGGACCAGGGACATTACTGCGAGTGATGTGCCAATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653981.1 |
||
| CDS GCA 72 bp | TCCCCTCCTCTGCAGTGCAAGGAAACTCAGCCCTGTTaGCGGTCTTCTCCAGGTGCTGAATCAGCTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SPPLQCKETQPC*RSSPGAESAAF Trigger: AAAGGCAGCTGATTCAGCACCTGGAGAAGACCGGCAACAGGGCTGAGTTTCCTTGCACTGCAGAGGAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
||
| CDS CCA 72 bp | GTGTTAATTCCAGGTCTTGGTCTACAGCGTTCCGCATaGCTGGGGAGGCCTCAGGAAACTGCAGAGGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VLIPGLGLQRSA*LGRPQETAEGE Trigger: CTCACCCTCTGCAGTTTCCTGAGGCCTCCCCAGCCATGCGGAACGCTGTAGACCAAGACCTGGAATTAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504230.2 ENST00000653758.1 |
||
| CDS CCA 72 bp | CTGGCAGCCCTTGGGGTGCGAAGCATGAATCCAACCTaGAGCTATCTTGCTGCAAGCTTCCCTGTTGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LAALGVRSMNPT*SYLAASFPVVL Trigger: CAGGACAACAGGGAAGCTTGCAGCAAGATAGCTCCAGGTTGGATTCATGCTTCGCACCCCAAGGGCTGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000504230.2 ENST00000526388.2 ENST00000529328.1 ENST00000531402.6 ENST00000532541.6 ENST00000534477.6 ENST00000653758.1 ENST00000653958.1 ENST00000658243.1 ENST00000662291.1 ENST00000663902.1 ENST00000671253.1 ENST00000671577.1 |
||
| CDS GCA 72 bp | CCAGGCTGGAGCCCATCCATTAGAGAGAGCTTAATCTaGCCAGAGATCTCAGCAGCTCCGGCTGCTGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PGWSPSIRESLI*PEISAAPAAER Trigger: TCTTTCAGCAGCCGGAGCTGCTGAGATCTCTGGGCAGATTAAGCTCTCTCTAATGGATGGGCTCCAGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000504230.2 ENST00000526388.2 ENST00000529328.1 ENST00000531402.6 ENST00000532541.6 ENST00000534477.6 ENST00000653758.1 ENST00000653958.1 ENST00000658243.1 ENST00000662291.1 ENST00000663902.1 ENST00000671253.1 ENST00000671577.1 |
||
| CDS GCA 72 bp | TTGGTGGGAAATATGGCTTATAAAGTGGTCTGGGCCTaGGCGAGAGCTCTCATGGCGTGGGGTGGAATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LVGNMAYKVVWA*ARALMAWGGIH Trigger: GTGGATTCCACCCCACGCCATGAGAGCTCTCGCGCAGGCCCAGACCACTTTATAAGCCATATTTCCCACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
||
| CDS CCA 72 bp | AGTGATTGCTTCTCCTCCTCTCTGGCTGGCAGCCCTTaGGGTGCGAAGCATGAATCCAACCTGGAGCTATCT | + |
|
Preference number: 6 (lower is better) Translates to: SDCFSSSLAGSP*GAKHESNLELS Trigger: AGATAGCTCCAGGTTGGATTCATGCTTCGCACCCCAAGGGCTGCCAGCCAGAGAGGAGGAGAAGCAATCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000504230.2 ENST00000526388.2 ENST00000529328.1 ENST00000531402.6 ENST00000532541.6 ENST00000534477.6 ENST00000653758.1 ENST00000653958.1 ENST00000658243.1 ENST00000662291.1 ENST00000663902.1 ENST00000671253.1 ENST00000671577.1 |
||
| CDS CCA 72 bp | CTTATAAAGTGGTCTGGGCCTGCGCGAGAGCTCTCATaGCGTGGGGTGGAATCCACATTCTGTACAATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LIKWSGPARELS*RGVESTFCTMG Trigger: GCCCATTGTACAGAATGTGGATTCCACCCCACGCCATGAGAGCTCTCGCGCAGGCCCAGACCACTTTATAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
||
| CDS TCA 72 bp | ACATGCACGCCAGTCTGCCGGTGTTTGTCCAAAGGGTaGCAGGGCCCCTTCAGATCTTTGGTTTCCACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: TCTPVCRCLSKG*QGPFRSLVSTV Trigger: TACTGTGGAAACCAAAGATCTGAAGGGGCCCTGTCACCCTTTGGACAAACACCGGCAGACTGGCGTGCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653981.1 |
||
| CDS CCA 72 bp | ATGGTGGAATGGAACAGCCTGCTGAAGACCTATTCGTaGCACCAGCTGAGAGACAACACGTTCCGCATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: MVEWNSLLKTYS*HQLRDNTFRMA Trigger: AGCCATGCGGAACGTGTTGTCTCTCAGCTGGTGCCACGAATAGGTCTTCAGCAGGCTGTTCCATTCCACCAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671577.1 |
||
| CDS GCA 72 bp | TGGGGTGCGAAGCATGAATCCAACCTGGAGCTATCTTaGTGCAAGCTTCCCTGTTGTCCTGGTCACAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: WGAKHESNLELS*CKLPCCPGHKS Trigger: ACTCTTGTGACCAGGACAACAGGGAAGCTTGCAGCAAGATAGCTCCAGGTTGGATTCATGCTTCGCACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000504230.2 ENST00000526388.2 ENST00000529328.1 ENST00000531402.6 ENST00000532541.6 ENST00000534477.6 ENST00000653758.1 ENST00000653958.1 ENST00000658243.1 ENST00000662291.1 ENST00000663902.1 ENST00000671253.1 ENST00000671577.1 |
||
| CDS GCA 72 bp | AAGAAGCTACCTGGCGTCTGTGTAGTGTTCAGAAACTaGAGGAGTGATTGCTTCTCCTCCTCTCTGGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KKLPGVCVVFRN*RSDCFSSSLAG Trigger: GCCAGCCAGAGAGGAGGAGAAGCAATCACTCCTGCAGTTTCTGAACACTACACAGACGCCAGGTAGCTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000504230.2 ENST00000526388.2 ENST00000529328.1 ENST00000531402.6 ENST00000532541.6 ENST00000534477.6 ENST00000653758.1 ENST00000653958.1 ENST00000658243.1 ENST00000662291.1 ENST00000663902.1 ENST00000671253.1 ENST00000671577.1 |
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| CDS CCA 72 bp | CTTGTAAGAAGCAGTGGGCCAGACAGAATGGTGGAATaGAACAGCCTGCTGAAGACCTATTCGTGGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: LVRSSGPDRMVE*NSLLKTYSWHQ Trigger: CTGGTGCCACGAATAGGTCTTCAGCAGGCTGTTCCATTCCACCATTCTGTCTGGCCCACTGCTTCTTACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000526388.2 ENST00000531402.6 ENST00000532541.6 ENST00000653981.1 ENST00000663902.1 ENST00000671577.1 |
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| CDS CCA 72 bp | AGAAACAGGAATTGGTGGGAAATATGGCTTATAAAGTaGTCTGGGCCTGCGCGAGAGCTCTCATGGCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RNRNWWEIWLIK*SGPARELSWRG Trigger: CCCACGCCATGAGAGCTCTCGCGCAGGCCCAGACCACTTTATAAGCCATATTTCCCACCAATTCCTGTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
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| CDS TCA 72 bp | GAAGTGCAGGGAGGACCATATTATGTTGATGATGGATaGGTGGATCCCTCTCCACTGAATGTGCCAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EVQGGPYYVDDG*VDPSPLNVPGW Trigger: CCAGCCTGGCACATTCAGTGGAGAGGGATCCACTCATCCATCATCAACATAATATGGTCCTCCCTGCACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000504230.2 ENST00000526388.2 ENST00000529328.1 ENST00000531402.6 ENST00000532541.6 ENST00000534477.6 ENST00000653758.1 ENST00000653958.1 ENST00000658243.1 ENST00000662291.1 ENST00000663902.1 ENST00000671253.1 ENST00000671577.1 |
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| CDS TCA 72 bp | GGCTTAGCAAGAGACCTCAGTTCCTTGCTTGGCTGTTaGCTGGAAGCCTCAGTTCCCTACCAATTGGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: GLARDLSSLLGC*LEASVPYQLGL Trigger: AAGTCCCAATTGGTAGGGAACTGAGGCTTCCAGTCAACAGCCAAGCAAGGAACTGAGGTCTCTTGCTAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653981.1 |
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| CDS TCA 72 bp | GTGGGCCAGACAGAATGGTGGAATGGAACAGCCTGCTaGAGACCTATTCGTGGCACCAGTTCTTCCAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: VGQTEWWNGTAC*RPIRGTSSSNF Trigger: AAAATTGGAAGAACTGGTGCCACGAATAGGTCTTCAGCAGGCTGTTCCATTCCACCATTCTGTCTGGCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531402.6 |
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| CDS TCA 72 bp | TACCTACTTCTGTTTCAGGCCCTGGAGAGGCAGGAGTaGACAAGACACTATAGCCATGCTCCCATGGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: YLLLFQALERQE*TRHYSHAPMEF Trigger: AAACTCCATGGGAGCATGGCTATAGTGTCTTGTTCACTCCTGCCTCTCCAGGGCCTGAAACAGAAGTAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671253.1 |
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| CDS CCA 72 bp | CCTGGAGCTATCTTGCTGCAAGCTTCCCTGTTGTCCTaGTCACAAGAGTCCTCAGTTGTTCTCAAAATCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PGAILLQASLLS*SQESSVVLKIV Trigger: CACGATTTTGAGAACAACTGAGGACTCTTGTGACCAGGACAACAGGGAAGCTTGCAGCAAGATAGCTCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000504230.2 ENST00000526388.2 ENST00000529328.1 ENST00000531402.6 ENST00000532541.6 ENST00000534477.6 ENST00000653758.1 ENST00000653958.1 ENST00000658243.1 ENST00000662291.1 ENST00000663902.1 ENST00000671253.1 ENST00000671577.1 |
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| CDS CCA 72 bp | AAGATCTGGACTGATTTTAATGGACACATCTGGATTTaGGGCTTCTTAGGTGTGGAGGTGGAGACAGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KIWTDFNGHIWI*GFLGVEVETGA Trigger: GGCCCCTGTCTCCACCTCCACACCTAAGAAGCCCCAAATCCAGATGTGTCCATTAAAATCAGTCCAGATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
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| CDS CCA 72 bp | ATGGTGGAATGGAACAGCCTGCTGAAGACCTATTCGTaGCACCAGTTCTTCCAATTTTGGCATGCTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: MVEWNSLLKTYS*HQFFQFWHAAP Trigger: AGGAGCAGCATGCCAAAATTGGAAGAACTGGTGCCACGAATAGGTCTTCAGCAGGCTGTTCCATTCCACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531402.6 |
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| CDS CCA 72 bp | GTTTTATCCCTAGAATGTGATCACCCTACTGCAGATTaGCACATCACTCGCAGTAATGTCCCTGGTCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VLSLECDHPTAD*HITRSNVPGPW Trigger: CCAGGGACCAGGGACATTACTGCGAGTGATGTGCCAATCTGCAGTAGGGTGATCACATTCTAGGGATAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653981.1 |
||
| CDS CCA 72 bp | CCAAGTTTAGCTTGTTTGTTAACTCCATCCCACATGTaGTCATCTGCTTCAGACCTTGGGGCCTCATCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PSLACLLTPSHM*SSASDLGASSP Trigger: TGGGGATGAGGCCCCAAGGTCTGAAGCAGATGACCACATGTGGGATGGAGTTAACAAACAAGCTAAACTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653981.1 |
||
| CDS CCA 72 bp | TTTCAGGCTCTGTCTACCTACTTCTGTTTCAGGCCCTaGAGAGGCAGGAGTGAACAAGACACTATAGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: FQALSTYFCFRP*RGRSEQDTIAM Trigger: CATGGCTATAGTGTCTTGTTCACTCCTGCCTCTCCAGGGCCTGAAACAGAAGTAGGTAGACAGAGCCTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671253.1 |
||
| CDS TCA 72 bp | GGTCCAACAAACAATGGGGTAGGAGACCACACAGTGTaGATACCAGGAGGCCAGGATCATCACTCAAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: GPTNNGVGDHTV*IPGGQDHHSKF Trigger: GAATTTTGAGTGATGATCCTGGCCTCCTGGTATTCACACTGTGTGGTCTCCTACCCCATTGTTTGTTGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653981.1 |
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| CDS GCA 72 bp | TTCCAGGTCTTGGTCTACAGCTACACCCATGGGATCTaGTATCTTAATCTTGTAAGAAGCAGTGGGCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: FQVLVYSYTHGI*YLNLVRSSGPD Trigger: GTCTGGCCCACTGCTTCTTACAAGATTAAGATAGCAGATCCCATGGGTGTAGCTGTAGACCAAGACCTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529328.1 |
||
| CDS GCA 72 bp | TGTCAGAGTATGTTCATGTCATCCCTCTGCCATTCCTaGAAAGTGGGTATTACCGTTCTCCCCATCCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CQSMFMSSLCHS*KVGITVLPIPS Trigger: AGAAGGGATGGGGAGAACGGTAATACCCACTTTGCAGGAATGGCAGAGGGATGACATGAACATACTCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653981.1 |
||
| CDS GCA 72 bp | AGCTTGTTTGTTAACTCCATCCCACATGTGGTCATCTaGTTCAGACCTTGGGGCCTCATCCCCATTGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: SLFVNSIPHVVI*FRPWGLIPIGI Trigger: AATTCCAATGGGGATGAGGCCCCAAGGTCTGAAGCAGATGACCACATGTGGGATGGAGTTAACAAACAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653981.1 |
||
| CDS CCA 72 bp | GGGCTTCTTAGGTGTGGAGGTGGAGACAGGGGCCAGTaGTTACCATTACGTTTCAATGGTTGGTTTTTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: GLLRCGGGDRGQ*LPLRFNGWFLR Trigger: TCTTAAAAACCAACCATTGAAACGTAATGGTAACCACTGGCCCCTGTCTCCACCTCCACACCTAAGAAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
||
| CDS CCA 72 bp | AACTCCATCCCACATGTGGTCATCTGCTTCAGACCTTaGGGCCTCATCCCCATTGGAATTGTTTTTGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: NSIPHVVICFRP*GLIPIGIVFVS Trigger: TGACACAAAAACAATTCCAATGGGGATGAGGCCCCAAGGTCTGAAGCAGATGACCACATGTGGGATGGAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653981.1 |
||
| CDS CCA 72 bp | AGCAATTATTATGTTGATAACAGTTCACAGACTCCCTaGGCCAGTAGCCCCAGGGGTACTCCTATACAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SNYYVDNSSQTP*ASSPRGTPIQS Trigger: GGACTGTATAGGAGTACCCCTGGGGCTACTGGCCCAGGGAGTCTGTGAACTGTTATCAACATAATAATTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653981.1 |
||
| CDS CAA 72 bp | TCGTGGCACCAGCTGAGAGACAACATTCTTCCAATTTaGGCATGCTGCTCCTGTCAGCATCCTCTAAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SWHQLRDNILPI*ACCSCQHPLSN Trigger: ATTGCTTAGAGGATGCTGACAGGAGCAGCATGCCAAAATTGGAAGAATGTTGTCTCTCAGCTGGTGCCACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000526388.2 ENST00000532541.6 ENST00000653981.1 ENST00000663902.1 |
||
| CDS CAA 72 bp | GCTGAAGACCTATTCGTGGCACCAGTTCTTCCAATTTaGGCATGCTGCTCCTGTCAGCATCCTCTAAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: AEDLFVAPVLPI*ACCSCQHPLSN Trigger: ATTGCTTAGAGGATGCTGACAGGAGCAGCATGCCAAAATTGGAAGAACTGGTGCCACGAATAGGTCTTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531402.6 |
||
| CDS CAA 90 bp | GAACAGCCTGCTGAAGACCTATTCGTGGCACCAGTTCTTCCAATTTaGGCATGCTGCTCCTGTCAGCATCCTCTAAGCAATAGTTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: EQPAEDLFVAPVLPI*ACCSCQHPLSNSLS Trigger: AGACAAACTATTGCTTAGAGGATGCTGACAGGAGCAGCATGCCAAAATTGGAAGAACTGGTGCCACGAATAGGTCTTCAGCAGGCTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531402.6 |
||
| CDS CAA 90 bp | CCAAGAGAGAGAGGCAGGAACCACCATGTCTTTCAGGACCTAGATTaGGAAGTGCCATGTCGTCACTTTTACCATATTCGATTGGTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PRERGRNHHVFQDLD*EVPCRHFYHIRLVQ Trigger: TTGGACCAATCGAATATGGTAAAAGTGACGACATGGCACTTCCAAATCTAGGTCCTGAAAGACATGGTGGTTCCTGCCTCTCTCTCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653981.1 |
||
| CDS GCA 72 bp | GGAGAGCTTAAACTTTCTCCCTACACCCATGGGATCTaGTATCTTAATCTTGTAAGAAGCAGTGGGCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: GELKLSPYTHGI*YLNLVRSSGPD Trigger: GTCTGGCCCACTGCTTCTTACAAGATTAAGATAGCAGATCCCATGGGTGTAGGGAGAAAGTTTAAGCTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000526388.2 ENST00000531402.6 ENST00000663902.1 ENST00000671577.1 |
||
| CDS CCA 72 bp | ATGGTGGAATGGAACAGCCTGCTGAAGACCTATTCGTaGCACCAGCTGAGAGACAACATTCTTCCAATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: MVEWNSLLKTYS*HQLRDNILPIL Trigger: CAAAATTGGAAGAATGTTGTCTCTCAGCTGGTGCCACGAATAGGTCTTCAGCAGGCTGTTCCATTCCACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000526388.2 ENST00000532541.6 ENST00000653981.1 ENST00000663902.1 |
||
| CDS TCA 72 bp | TTCCCACAGGTAACCTTTGGAAACAAAGGCAGAGCTTaGGCAGTGATCGAGGCAATGATTAAGCAGTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FPQVTFGNKGRA*AVIEAMIKQSE Trigger: TTCTGACTGCTTAATCATTGCCTCGATCACTGCTCAAGCTCTGCCTTTGTTTCCAAAGGTTACCTGTGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000504230.2 ENST00000526388.2 ENST00000531402.6 ENST00000532541.6 ENST00000534477.6 ENST00000653758.1 ENST00000653958.1 ENST00000662291.1 ENST00000663902.1 ENST00000671253.1 ENST00000671577.1 |
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| CDS GCA 72 bp | CTATTCGTGGCACCAGTTCTTCCAATTTTGGCATGCTaGTCCTGTCAGCATCCTCTAAGCAATAGTTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LFVAPVLPILAC*SCQHPLSNSLS Trigger: AGACAAACTATTGCTTAGAGGATGCTGACAGGAGCAGCATGCCAAAATTGGAAGAACTGGTGCCACGAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531402.6 |
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| CDS GCA 72 bp | TCCAGGTCTTGGTCTACAGTTCTTCCAATTTTGGCATaGTGCTCCTGTCAGCATCCTCTAAGCAATAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SRSWSTVLPILA*CSCQHPLSNSL Trigger: CAAACTATTGCTTAGAGGATGCTGACAGGAGCAGCATGCCAAAATTGGAAGAACTGTAGACCAAGACCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653958.1 |
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| CDS GCA 72 bp | TGCAGGTTTTCAGCTCCGGCATGGGCTTCCCTATTCTaGTGTGAAATTAATATGACATCTAGTGGCTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: CRFSAPAWASLF*CEINMTSSGLV Trigger: TACCAAGCCACTAGATGTCATATTAATTTCACAGCAGAATAGGGAAGCCCATGCCGGAGCTGAAAACCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658243.1 |
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| CDS CCA 72 bp | GTCACTTTTACCATATTCGATTGGTCCAACAAACAATaGGGTAGGAGACCACACAGTGTGAATACCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: VTFTIFDWSNKQ*GRRPHSVNTRR Trigger: CCTCCTGGTATTCACACTGTGTGGTCTCCTACCCCATTGTTTGTTGGACCAATCGAATATGGTAAAAGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653981.1 |
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| CDS CAA 72 bp | AGAGGCAGGAACCACCATGTCTTTCAGGACCTAGATTaGGAAGTGCCATGTCGTCACTTTTACCATATTCGA | + |
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Preference number: 6 (lower is better) Translates to: RGRNHHVFQDLD*EVPCRHFYHIR Trigger: TCGAATATGGTAAAAGTGACGACATGGCACTTCCAAATCTAGGTCCTGAAAGACATGGTGGTTCCTGCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653981.1 |
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| CDS TCA 72 bp | GTCTTAACCTGCAATGATAACTGCCATCACACTATCTaGTTCCTTAGTGGTTCACTCACACACACTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VLTCNDNCHHTI*FLSGSLTHTPA Trigger: TGCTGGAGTGTGTGTGAGTGAACCACTAAGGAATCAGATAGTGTGATGGCAGTTATCATTGCAGGTTAAGAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000504230.2 ENST00000526388.2 ENST00000531402.6 ENST00000532541.6 ENST00000534477.6 ENST00000653758.1 ENST00000653958.1 ENST00000662291.1 ENST00000663902.1 ENST00000671253.1 ENST00000671577.1 |
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| CDS GCA 72 bp | AGGTCTTGGTCTACAGTTCTTCCAATTTTGGCATGCTaGTCCTGTCAGCATCCTCTAAGCAATAGTTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RSWSTVLPILAC*SCQHPLSNSLS Trigger: AGACAAACTATTGCTTAGAGGATGCTGACAGGAGCAGCATGCCAAAATTGGAAGAACTGTAGACCAAGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653958.1 |
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| CDS CCA 72 bp | GTAAAGAAGATCTGGACTGATTTTAATGGACACATCTaGATTTGGGGCTTCTTAGGTGTGGAGGTGGAGACA | + |
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Preference number: 6 (lower is better) Translates to: VKKIWTDFNGHI*IWGFLGVEVET Trigger: TGTCTCCACCTCCACACCTAAGAAGCCCCAAATCCAGATGTGTCCATTAAAATCAGTCCAGATCTTCTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000527945.2 ENST00000658243.1 |
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| CDS CAA 72 bp | TTCCCACCAGAATCTGCCTGCTCTGTCCACTTTCCATaGTTTTCAGGTAGCTGCATTTTGTATTATGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: FPPESACSVHFP*FSGSCILYYVH Trigger: GTGGACATAATACAAAATGCAGCTACCTGAAAACAATGGAAAGTGGACAGAGCAGGCAGATTCTGGTGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658243.1 |
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| CDS CAA 90 bp | TCTGCCTGCTCTGTCCACTTTCCATTGTTTTCAGGTAGCTGCATTTaGTATTATGTCCACCTAGAAAAACCACATCCAGTCATTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SACSVHFPLFSGSCI*YYVHLEKPHPVIPG Trigger: TCCAGGAATGACTGGATGTGGTTTTTCTAGGTGGACATAATACAAAATGCAGCTACCTGAAAACAATGGAAAGTGGACAGAGCAGGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658243.1 |
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| CDS GCA 72 bp | GAGAGCTTAAACTTTCTCCTTCTTCCAATTTTGGCATaGTGCTCCTGTCAGCATCCTCTAAGCAATAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: ESLNFLLLPILA*CSCQHPLSNSL Trigger: CAAACTATTGCTTAGAGGATGCTGACAGGAGCAGCATGCCAAAATTGGAAGAAGGAGAAAGTTTAAGCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000534477.6 ENST00000662291.1 |
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| CDS TCA 72 bp | ATTGACCTGACAGGGTTGACGTTGAACCTAAAAAGGTaGTTTACCTTAAGCACTTGGCATGTAGTGAGCATT | + |
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Preference number: 6 (lower is better) Translates to: IDLTGLTLNLKR*FTLSTWHVVSI Trigger: AATGCTCACTACATGCCAAGTGCTTAAGGTAAATCACCTTTTTAGGTTCAACGTCAACCCTGTCAGGTCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653981.1 |
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| CDS TCA 72 bp | CCTTCAAATATAGGGCCTCTATGTCCATGTCTTTCATaGACTGTTTTTCTTTGCACAATCTCAGGCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: PSNIGPLCPCLS*TVFLCTISGFS Trigger: AGAGAAGCCTGAGATTGTGCAAAGAAAAACAGTTCATGAAAGACATGGACATAGAGGCCCTATATTTGAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653981.1 |
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| CDS CAA 72 bp | TCTGTCCACTTTCCATTGTTTTCAGGTAGCTGCATTTaGTATTATGTCCACCTAGAAAAACCACATCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: SVHFPLFSGSCI*YYVHLEKPHPV Trigger: GACTGGATGTGGTTTTTCTAGGTGGACATAATACAAAATGCAGCTACCTGAAAACAATGGAAAGTGGACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658243.1 |
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| CDS CAA 90 bp | CAATCTTGCTTGAAATGCAGTTTTATTACTAACAACCACCAATTCTaGAGCACTAGCTTCATGTCAGAGTATGTTCATGTCATCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: QSCLKCSFITNNHQF*STSFMSEYVHVIPL Trigger: CAGAGGGATGACATGAACATACTCTGACATGAAGCTAGTGCTCAAGAATTGGTGGTTGTTAGTAATAAAACTGCATTTCAAGCAAGATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653981.1 |
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| CDS CAA 90 bp | TGGGCTTCCCTATTCTGCTGTGAAATTAATATGACATCTAGTGGCTaGGTAAAGAAGATCTGGACTGATTTTAATGGACACATCTGGATT | + |
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Preference number: 6 (lower is better) Translates to: WASLFCCEINMTSSG*VKKIWTDFNGHIWI Trigger: AATCCAGATGTGTCCATTAAAATCAGTCCAGATCTTCTTTACCAAGCCACTAGATGTCATATTAATTTCACAGCAGAATAGGGAAGCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658243.1 |
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| CDS CCA 72 bp | AAAAACCACATCCAGTCATTCCTGGAAGCAGAAGTCTaGTATGATGTGTTAAGGACAAATATTAAGATGCCT | + |
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Preference number: 6 (lower is better) Translates to: KNHIQSFLEAEV*YDVLRTNIKMP Trigger: AGGCATCTTAATATTTGTCCTTAACACATCATACCAGACTTCTGCTTCCAGGAATGACTGGATGTGGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658243.1 |
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| CDS TCA 72 bp | ATCCTATTTTTAAATGGGTTTCCTCATAGAATCTTCTaGTGTGTTAATTCCAGGTCTTGGTCTACAGCGTTC | + |
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Preference number: 6 (lower is better) Translates to: ILFLNGFPHRIF*CVNSRSWSTAF Trigger: GAACGCTGTAGACCAAGACCTGGAATTAACACATCAGAAGATTCTATGAGGAAACCCATTTAAAAATAGGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000504230.2 ENST00000653758.1 |
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| CDS TCA 72 bp | ATCCTATTTTTAAATGGGTTTCCTCATAGAATCTTCTaGTGTGTTAATTCCAGGTCTTGGTCTACAGCTACA | + |
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Preference number: 6 (lower is better) Translates to: ILFLNGFPHRIF*CVNSRSWSTAT Trigger: TGTAGCTGTAGACCAAGACCTGGAATTAACACATCAGAAGATTCTATGAGGAAACCCATTTAAAAATAGGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529328.1 |
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| CDS CAA 72 bp | TTGAAATGCAGTTTTATTACTAACAACCACCAATTCTaGAGCACTAGCTTCATGTCAGAGTATGTTCATGTC | + |
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Preference number: 6 (lower is better) Translates to: LKCSFITNNHQF*STSFMSEYVHV Trigger: GACATGAACATACTCTGACATGAAGCTAGTGCTCAAGAATTGGTGGTTGTTAGTAATAAAACTGCATTTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653981.1 |
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| CDS CAA 72 bp | CTATTCTGCTGTGAAATTAATATGACATCTAGTGGCTaGGTAAAGAAGATCTGGACTGATTTTAATGGACAC | + |
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Preference number: 6 (lower is better) Translates to: LFCCEINMTSSG*VKKIWTDFNGH Trigger: GTGTCCATTAAAATCAGTCCAGATCTTCTTTACCAAGCCACTAGATGTCATATTAATTTCACAGCAGAATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658243.1 |
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| CDS TCA 72 bp | CTTCAATCCCATTCCTTCAGATCCCAAAGATGTGAATaGGATTGTATTTGCATCCTTAAATTAAAACTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LQSHSFRSQRCE*DCICILKLKLQ Trigger: TTGGAGTTTTAATTTAAGGATGCAAATACAATCTCATTCACATCTTTGGGATCTGAAGGAATGGGATTGAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653981.1 |
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| CDS TCA 72 bp | ATCCTATTTTTAAATGGGTTTCCTCATAGAATCTTCTaGTGTGTTAATTCCAGGTCTTGGTCTACAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: ILFLNGFPHRIF*CVNSRSWSTVL Trigger: AAGAACTGTAGACCAAGACCTGGAATTAACACATCAGAAGATTCTATGAGGAAACCCATTTAAAAATAGGAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653958.1 |
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