Pregenerated sensors for LINC00954 (Homo sapiens)
Ensembl gene IDs: ENSG00000228784Ensembl transcript IDs: ENST00000433669.2, ENST00000449086.5, ENST00000456119.5, ENST00000607100.5, ENST00000649549.1, ENST00000653306.1, ENST00000654739.1, ENST00000655598.1, ENST00000662620.1
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGACAGGACCAGCACAGTGGCCACCACCGTGACCAGGAAGCAAGATaGCCAGCCAGGGCCACAGCCAGGACCTTCAGGCACTGTTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: GQDQHSGHHRDQEAR*PARATARTFRHCSL Trigger: CAAAGAACAGTGCCTGAAGGTCCTGGCTGTGGCCCTGGCTGGCCATCTTGCTTCCTGGTCACGGTGGTGGCCACTGTGCTGGTCCTGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS GCA 90 bp | ACCAAGGCAGATGCACAAGGCCTTCTTCATGCAGGATGGGGGCGGTaGTGTGGTTCTAGACTGGGATCAGCAGTGGGCCTGAAGACAGGG | + |
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Preference number: 5 (lower is better) Translates to: TKADAQGLLHAGWGR*CGSRLGSAVGLKTG Trigger: CCCTGTCTTCAGGCCCACTGCTGATCCCAGTCTAGAACCACAGCACCGCCCCCATCCTGCATGAAGAAGGCCTTGTGCATCTGCCTTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS CCA 90 bp | CTCTCTGAGGCCCTGGGACTGCCATACCACCATGCCATCTCCTGGTaGCAGGACAGCTTTCTTCTTCCACCTGTCCTTGTGCCTGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: LSEALGLPYHHAISW*QDSFLLPPVLVPVL Trigger: GAGGACAGGCACAAGGACAGGTGGAAGAAGAAAGCTGTCCTGCCACCAGGAGATGGCATGGTGGTATGGCAGTCCCAGGGCCTCAGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653306.1 ENST00000654739.1 ENST00000662620.1 |
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| CDS CCA 90 bp | GCTCTCTCTGAGGCCCTGGGACTGCCATACCACCATGCCATCTCCTaGTGGCAGGACAGCTTTCTTCTTCCACCTGTCCTTGTGCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: ALSEALGLPYHHAIS*WQDSFLLPPVLVPV Trigger: GACAGGCACAAGGACAGGTGGAAGAAGAAAGCTGTCCTGCCACCAGGAGATGGCATGGTGGTATGGCAGTCCCAGGGCCTCAGAGAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653306.1 ENST00000654739.1 ENST00000662620.1 |
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| CDS GCA 90 bp | AGGGAGTACAGACCAGTCAGCCTGGAAAGATCTCACCAAGGCAGATaGACAAGGCCTTCTTCATGCAGGATGGGGGCGGTGCTGTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: REYRPVSLERSHQGR*TRPSSCRMGAVLWF Trigger: GAACCACAGCACCGCCCCCATCCTGCATGAAGAAGGCCTTGTGCATCTGCCTTGGTGAGATCTTTCCAGGCTGACTGGTCTGTACTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS GCA 90 bp | ATGGCAGAAGGCAAAGGAGAAGCAGGCACCTCCTTGAGCTACTCTTaGCTGGATCTCCAGTGTCTGTCTGCTCTCTCTGAGGCCCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: MAEGKGEAGTSLSYS*LDLQCLSALSEALG Trigger: TCCCAGGGCCTCAGAGAGAGCAGACAGACACTGGAGATCCAGGCAAGAGTAGCTCAAGGAGGTGCCTGCTTCTCCTTTGCCTTCTGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654739.1 |
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| CDS CCA 90 bp | AAAGATCTCACCAAGGCAGATGCACAAGGCCTTCTTCATGCAGGATaGGGGCGGTGCTGTGGTTCTAGACTGGGATCAGCAGTGGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: KDLTKADAQGLLHAG*GRCCGSRLGSAVGL Trigger: CAGGCCCACTGCTGATCCCAGTCTAGAACCACAGCACCGCCCCCATCCTGCATGAAGAAGGCCTTGTGCATCTGCCTTGGTGAGATCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS CCA 90 bp | CTGCAGGCAGACGTGTTCCAAGTGCTCATCGAGAGCTCAGAACTCTaGGCAGCACTTAGGGCTATGGCGGTACCAGGGCAGTTTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: LQADVFQVLIESSEL*AALRAMAVPGQFSP Trigger: AGGAGAAAACTGCCCTGGTACCGCCATAGCCCTAAGTGCTGCCCAGAGTTCTGAGCTCTCGATGAGCACTTGGAACACGTCTGCCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS TCA 90 bp | TGGCAGTCCTTGGACGAGGCTGGGCTAAGCCTTTATGCTGCTCCTTaGGGTAGGACTTGGCTCCTGACCCCAGGGCTTTTCACAAGTTAC | + |
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Preference number: 5 (lower is better) Translates to: WQSLDEAGLSLYAAP*GRTWLLTPGLFTSY Trigger: GTAACTTGTGAAAAGCCCTGGGGTCAGGAGCCAAGTCCTACCTCAAGGAGCAGCATAAAGGCTTAGCCCAGCCTCGTCCAAGGACTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS GCA 90 bp | GTCCCCCAAAGTATACTCCAGAACACCCTTACCTTGAGCTACTCTTaGCTGGATCTCCAGTGTCTGTCTGCTCTCTCTGAGGCCCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: VPQSILQNTLTLSYS*LDLQCLSALSEALG Trigger: TCCCAGGGCCTCAGAGAGAGCAGACAGACACTGGAGATCCAGGCAAGAGTAGCTCAAGGTAAGGGTGTTCTGGAGTATACTTTGGGGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653306.1 |
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| CDS CCA 90 bp | GAGCTGGTCTCGATCATCTCCCCAGGGAGTACAGACCAGTCAGCCTaGAAAGATCTCACCAAGGCAGATGCACAAGGCCTTCTTCATGCA | + |
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Preference number: 5 (lower is better) Translates to: ELVSIISPGSTDQSA*KDLTKADAQGLLHA Trigger: TGCATGAAGAAGGCCTTGTGCATCTGCCTTGGTGAGATCTTTCCAGGCTGACTGGTCTGTACTCCCTGGGGAGATGATCGAGACCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS CCA 90 bp | TTGGCTTGCAGGTGCAATCCTTCAGTGTGGCCTTGCACATGTCAATaGAAGGGTCTGTGGCCATCATGGAAGAGATGGCCACAGTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: LACRCNPSVWPCTCQ*KGLWPSWKRWPQSH Trigger: GTGGGACTGTGGCCATCTCTTCCATGATGGCCACAGACCCTTCCATTGACATGTGCAAGGCCACACTGAAGGATTGCACCTGCAAGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS GCA 90 bp | ACAGGCTTCAAGGGCCTCTGCAGCGGAGTGCCAGGAGTTGTCCCTTaGTTTAGGAGAGGCAAGATCAGTGAGATAGAACACTTCCAACAG | + |
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Preference number: 5 (lower is better) Translates to: TGFKGLCSGVPGVVP*FRRGKISEIEHFQQ Trigger: CTGTTGGAAGTGTTCTATCTCACTGATCTTGCCTCTCCTAAAGCAAGGGACAACTCCTGGCACTCCGCTGCAGAGGCCCTTGAAGCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS CCA 90 bp | GCTGTGGGGCTCAGAAGAGAAGGACTCCATCTTTGGAGAGCATCTTaGTGTTCAACATGCTTTCACTCTTCAGCCTCCTTAGAGGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: AVGLRREGLHLWRAS*CSTCFHSSASLEGA Trigger: GGCCCCCTCTAAGGAGGCTGAAGAGTGAAAGCATGTTGAACACCAAGATGCTCTCCAAAGATGGAGTCCTTCTCTTCTGAGCCCCACAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
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| CDS CCA 90 bp | GTTTTGTGGACTCCCAGCGTGGAGCATTTACCCAGGGGGTGGAGATaGTCACAAAGATGTCACTGGAAGACTCATGTGGAGAAGTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: VLWTPSVEHLPRGWR*SQRCHWKTHVEKWD Trigger: GTCCCACTTCTCCACATGAGTCTTCCAGTGACATCTTTGTGACCATCTCCACCCCCTGGGTAAATGCTCCACGCTGGGAGTCCACAAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS TCA 90 bp | TTGAGGAGGAGGAACGCAGAGTTTCAAGGGCGGCAGGGGCTCGCATaGCATGCTTTCCACAGTTCCCACTCAGATCTTGATCTTCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: LRRRNAEFQGRQGLA*HAFHSSHSDLDLLL Trigger: CAAAAGAAGATCAAGATCTGAGTGGGAACTGTGGAAAGCATGTCATGCGAGCCCCTGCCGCCCTTGAAACTCTGCGTTCCTCCTCCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000449086.5 ENST00000649549.1 ENST00000655598.1 |
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| CDS TCA 90 bp | CCACCTGTCCTTGTGCCTGTCCTCTTGGGCCAATGTTTCTTTAACTaGGTAGTAGCAGAGCAGCATCAGCCTAGGACAAGCATGGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: PPVLVPVLLGQCFFN*VVAEQHQPRTSMEA Trigger: TGCCTCCATGCTTGTCCTAGGCTGATGCTGCTCTGCTACTACTCAGTTAAAGAAACATTGGCCCAAGAGGACAGGCACAAGGACAGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653306.1 ENST00000654739.1 ENST00000662620.1 |
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| CDS TCA 90 bp | GCAAAGGAGAAGCAGGCACCTCCTTCACAGGGTGGCAGGATGGAGTaGGTGCAAGCAGGGGACATGTCAGACACTTATAAAACCATCAGA | + |
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Preference number: 5 (lower is better) Translates to: AKEKQAPPSQGGRME*VQAGDMSDTYKTIR Trigger: TCTGATGGTTTTATAAGTGTCTGACATGTCCCCTGCTTGCACTCACTCCATCCTGCCACCCTGTGAAGGAGGTGCCTGCTTCTCCTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653306.1 ENST00000662620.1 |
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| CDS GCA 90 bp | CAGGCATCTCATTTCACTAAAATTCCAACAGGCTTCAAGGGCCTCTaGAGCGGAGTGCCAGGAGTTGTCCCTTGCTTTAGGAGAGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: QASHFTKIPTGFKGL*SGVPGVVPCFRRGK Trigger: CTTGCCTCTCCTAAAGCAAGGGACAACTCCTGGCACTCCGCTGCAGAGGCCCTTGAAGCCTGTTGGAATTTTAGTGAAATGAGATGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS GCA 90 bp | CAGCATTGGGGCTTGAGGCTGGAAGAGATAGCCTACTATCTGTTCTaGTGGTCTTCTCCATTGGTTGGTGGGCTATGTGCATGGTGGATC | + |
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Preference number: 5 (lower is better) Translates to: QHWGLRLEEIAYYLF*WSSPLVGGLCAWWI Trigger: GATCCACCATGCACATAGCCCACCAACCAATGGAGAAGACCAGCAGAACAGATAGTAGGCTATCTCTTCCAGCCTCAAGCCCCAATGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653306.1 ENST00000654739.1 ENST00000662620.1 |
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| CDS CCA 90 bp | CTCACTGAGGTACCACGGCTGGTGACGTCAAGTCAGAAGAAGGTTTaGTTGCTGCTAGACTCTGTTGGCTTGCAGGTGCAATCCTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: LTEVPRLVTSSQKKV*LLLDSVGLQVQSFS Trigger: ACTGAAGGATTGCACCTGCAAGCCAACAGAGTCTAGCAGCAACCAAACCTTCTTCTGACTTGACGTCACCAGCCGTGGTACCTCAGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS CCA 90 bp | GGAAGAGAGTCATGCCAGAGAATCTCTAAGTCAGACTGTGTTTTGTaGACTCCCAGCGTGGAGCATTTACCCAGGGGGTGGAGATGGTCA | + |
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Preference number: 5 (lower is better) Translates to: GRESCQRISKSDCVL*TPSVEHLPRGWRWS Trigger: TGACCATCTCCACCCCCTGGGTAAATGCTCCACGCTGGGAGTCCACAAAACACAGTCTGACTTAGAGATTCTCTGGCATGACTCTCTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS TCA 90 bp | GCAGGGGCTCGCATGACATGCTTTCCACAGTTCCCACTCAGATCTTaGTCTTCTTTTGGCTTGTGGGCATATAAGTCCTGGAGTCACTCC | + |
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Preference number: 5 (lower is better) Translates to: AGARMTCFPQFPLRS*SSFGLWAYKSWSHS Trigger: GGAGTGACTCCAGGACTTATATGCCCACAAGCCAAAAGAAGATCAAGATCTGAGTGGGAACTGTGGAAAGCATGTCATGCGAGCCCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000449086.5 ENST00000649549.1 ENST00000655598.1 |
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| CDS TCA 90 bp | TTCTGCCCTTTGTCCCCCAAAGTATACTCCAGAACACCCTTACCTTaGGCTACTCTTGCCTGGATCTCCAGTGTCTGTCTGCTCTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: FCPLSPKVYSRTPLP*ATLAWISSVCLLSL Trigger: CAGAGAGAGCAGACAGACACTGGAGATCCAGGCAAGAGTAGCTCAAGGTAAGGGTGTTCTGGAGTATACTTTGGGGGACAAAGGGCAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653306.1 |
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| CDS GCA 90 bp | GAGTCTGCCAACAGCTGCTTCTATACTGGGTTTCCAATCCCAGGATaGAGACAAGCCACTTGTGAGGAGTTACTTCTGTGTAGCCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: ESANSCFYTGFPIPG*RQATCEELLLCSPS Trigger: ACTGGGGCTACACAGAAGTAACTCCTCACAAGTGGCTTGTCTGCATCCTGGGATTGGAAACCCAGTATAGAAGCAGCTGTTGGCAGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
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| CDS CCA 90 bp | GAAGACATCACAGGAACAGTCAGGCACTCTCCACGTGGTCCTCTTTaGGGCTTCGTTCACACCAAAGGATCATCCCAATCCTGCAAAACT | + |
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Preference number: 5 (lower is better) Translates to: EDITGTVRHSPRGPL*GFVHTKGSSQSCKT Trigger: AGTTTTGCAGGATTGGGATGATCCTTTGGTGTGAACGAAGCCCCAAAGAGGACCACGTGGAGAGTGCCTGACTGTTCCTGTGATGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000607100.5 ENST00000649549.1 |
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| CDS CCA 90 bp | GACCTTGACAGGAGAAGTCTACCAAGGTTAATATTTCAGGGGTGGTaGCACCTGGGAGGGAAGACTGTATGGGGTACGTTGAGTCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: DLDRRSLPRLIFQGW*HLGGKTVWGTLSPV Trigger: AACAGGACTCAACGTACCCCATACAGTCTTCCCTCCCAGGTGCCACCACCCCTGAAATATTAACCTTGGTAGACTTCTCCTGTCAAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
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| CDS CCA 90 bp | TGTGACCTTGACAGGAGAAGTCTACCAAGGTTAATATTTCAGGGGTaGTGGCACCTGGGAGGGAAGACTGTATGGGGTACGTTGAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: CDLDRRSLPRLIFQG*WHLGGKTVWGTLSP Trigger: AGGACTCAACGTACCCCATACAGTCTTCCCTCCCAGGTGCCACCACCCCTGAAATATTAACCTTGGTAGACTTCTCCTGTCAAGGTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
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| CDS CCA 90 bp | GCCAGAGAATCTCTAAGTCAGACTGTGTTTTGTGGACTCCCAGCGTaGAGCATTTACCCAGGGGGTGGAGATGGTCACAAAGATGTCACT | + |
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Preference number: 5 (lower is better) Translates to: ARESLSQTVFCGLPA*SIYPGGGDGHKDVT Trigger: AGTGACATCTTTGTGACCATCTCCACCCCCTGGGTAAATGCTCCACGCTGGGAGTCCACAAAACACAGTCTGACTTAGAGATTCTCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS CCA 90 bp | CATTGGGGCTTGAGGCTGGAAGAGATAGCCTACTATCTGTTCTGCTaGTCTTCTCCATTGGTTGGTGGGCTATGTGCATGGTGGATCATG | + |
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Preference number: 5 (lower is better) Translates to: HWGLRLEEIAYYLFC*SSPLVGGLCAWWIM Trigger: CATGATCCACCATGCACATAGCCCACCAACCAATGGAGAAGACCAGCAGAACAGATAGTAGGCTATCTCTTCCAGCCTCAAGCCCCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653306.1 ENST00000654739.1 ENST00000662620.1 |
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| CDS TCA 90 bp | CTCTTTGAATCTGGGTGCCACAAACTTCACCAGCTTCTTGACCAATaGGGGGTATTGGACCTTCTCACCCTGGGAGACAGGGTAAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: LFESGCHKLHQLLDQ*GVLDLLTLGDRVKV Trigger: GACTTTTACCCTGTCTCCCAGGGTGAGAAGGTCCAATACCCCTCATTGGTCAAGAAGCTGGTGAAGTTTGTGGCACCCAGATTCAAAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000449086.5 ENST00000655598.1 |
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| CDS TCA 90 bp | GTGCTTATTACACTGGGAAGCTGTTGTCACGTGTCATTCATGGAATaGTGTACAGGTCATCTTGGACAGGACCAGCACAGTGGCCACCAC | + |
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Preference number: 5 (lower is better) Translates to: VLITLGSCCHVSFME*CTGHLGQDQHSGHH Trigger: GTGGTGGCCACTGTGCTGGTCCTGTCCAAGATGACCTGTACATCATTCCATGAATGACACGTGACAACAGCTTCCCAGTGTAATAAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS GCA 90 bp | ATTTCACTAAAATTCCAACAGGCTTCAAGGGCCTCTGCAGCGGAGTaGCAGGAGTTGTCCCTTGCTTTAGGAGAGGCAAGATCAGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: ISLKFQQASRASAAE*QELSLALGEARSVR Trigger: TCTCACTGATCTTGCCTCTCCTAAAGCAAGGGACAACTCCTGGCACTCCGCTGCAGAGGCCCTTGAAGCCTGTTGGAATTTTAGTGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS GCA 90 bp | AATGGCCTGGGGAAGTCCCACATCCTTGAAACTATATACCATTTCTaGAGGGTAGGAGAATGGTTTCCCATCTGGACCCACGCTCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: NGLGKSHILETIYHF*RVGEWFPIWTHAQH Trigger: ATGCTGAGCGTGGGTCCAGATGGGAAACCATTCTCCTACCCTGCAGAAATGGTATATAGTTTCAAGGATGTGGGACTTCCCCAGGCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649549.1 |
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| CDS CCA 90 bp | GGTGACGTCAAGTCAGAAGAAGGTTTGGTTGCTGCTAGACTCTGTTaGCTTGCAGGTGCAATCCTTCAGTGTGGCCTTGCACATGTCAAT | + |
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Preference number: 5 (lower is better) Translates to: GDVKSEEGLVAARLC*LAGAILQCGLAHVN Trigger: ATTGACATGTGCAAGGCCACACTGAAGGATTGCACCTGCAAGCCAACAGAGTCTAGCAGCAACCAAACCTTCTTCTGACTTGACGTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS CCA 90 bp | GCACAGCTGACTTCCATTCATACAGTGGCCATCTCACCTGTAGTCTaGATATCTTGTAATTGTGGGCCAGCCCTTCATAGCAAGGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: AQLTSIHTVAISPVV*ISCNCGPALHSKGS Trigger: GGAACCCTTGCTATGAAGGGCTGGCCCACAATTACAAGATATCCAGACTACAGGTGAGATGGCCACTGTATGAATGGAAGTCAGCTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654739.1 |
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| CDS TCA 90 bp | TCTGGCACTAGATCAGCAATGGCAGTTTCTCAGGTTACAGCTGTGTaGGGTCTGTGTTCACGGCCTTGGGTTCTGAAGTGTAAGCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: SGTRSAMAVSQVTAV*GLCSRPWVLKCKLL Trigger: CAAAAGCTTACACTTCAGAACCCAAGGCCGTGAACACAGACCTCACACAGCTGTAACCTGAGAAACTGCCATTGCTGATCTAGTGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
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| CDS GCA 90 bp | GGGCATGAAAGGAGTTCTGTTTTGACCACCATCAACTTGGTCACATaGCAATCAGTGTCTGACCACGTGTGCTCCAAGAATAGGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: GHERSSVLTTINLVT*QSVSDHVCSKNRWM Trigger: CATCCACCTATTCTTGGAGCACACGTGGTCAGACACTGATTGGCATGTGACCAAGTTGATGGTGGTCAAAACAGAACTCCTTTCATGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000607100.5 ENST00000649549.1 |
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| CDS GCA 90 bp | AGCAGCCACCCATTCTCTGTATTACTTCATGAGTCTGCCAACAGCTaGTTCTATACTGGGTTTCCAATCCCAGGATGCAGACAAGCCACT | + |
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Preference number: 5 (lower is better) Translates to: SSHPFSVLLHESANS*FYTGFPIPGCRQAT Trigger: AGTGGCTTGTCTGCATCCTGGGATTGGAAACCCAGTATAGAAGCAGCTGTTGGCAGACTCATGAAGTAATACAGAGAATGGGTGGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
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| CDS GCA 90 bp | CTTCTCACCAGTGAGGTCCACATCCTTGAAACTATATACCATTTCTaGAGGGTAGGAGAATGGTTTCCCATCTGGACCCACGCTCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: LLTSEVHILETIYHF*RVGEWFPIWTHAQH Trigger: ATGCTGAGCGTGGGTCCAGATGGGAAACCATTCTCCTACCCTGCAGAAATGGTATATAGTTTCAAGGATGTGGACCTCACTGGTGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS TCA 90 bp | TTGCTGCTAGCCTTCTTCCTTGCTAGTAATATGTCCGCTGGTACTTaGGAAGCCAGGCAACATGGCTTAAGCCAGGCATCTCATTTCACT | + |
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Preference number: 5 (lower is better) Translates to: LLLAFFLASNMSAGT*EARQHGLSQASHFT Trigger: AGTGAAATGAGATGCCTGGCTTAAGCCATGTTGCCTGGCTTCTCAAGTACCAGCGGACATATTACTAGCAAGGAAGAAGGCTAGCAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS GCA 90 bp | GGTCCTCTTTGGGGCTTCGTTCACACCAAAGGATCATCCCAATCCTaGAAAACTTCAACGGAAGTGGCAGGGAACATAGTAATACTGAAG | + |
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Preference number: 5 (lower is better) Translates to: GPLWGFVHTKGSSQS*KTSTEVAGNIVILK Trigger: CTTCAGTATTACTATGTTCCCTGCCACTTCCGTTGAAGTTTTGCAGGATTGGGATGATCCTTTGGTGTGAACGAAGCCCCAAAGAGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000607100.5 ENST00000649549.1 |
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| CDS CCA 90 bp | GAAACTATATACCATTTCTGCAGGGTAGGAGAATGGTTTCCCATCTaGACCCACGCTCAGCATGTAGTTCACATGGAGGACATAGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: ETIYHFCRVGEWFPI*THAQHVVHMEDIVG Trigger: ACCCACTATGTCCTCCATGTGAACTACATGCTGAGCGTGGGTCCAGATGGGAAACCATTCTCCTACCCTGCAGAAATGGTATATAGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000607100.5 ENST00000649549.1 |
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| CDS CCA 90 bp | ACCCACATCCTTGAAACTATATACCATTTCTGCAGGGTAGGAGAATaGTTTCCCATCTGGACCCACGCTCAGCATGTAGTTCACATGGAG | + |
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Preference number: 5 (lower is better) Translates to: THILETIYHFCRVGE*FPIWTHAQHVVHME Trigger: CTCCATGTGAACTACATGCTGAGCGTGGGTCCAGATGGGAAACCATTCTCCTACCCTGCAGAAATGGTATATAGTTTCAAGGATGTGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
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| CDS CCA 90 bp | GTCCACATCCTTGAAACTATATACCATTTCTGCAGGGTAGGAGAATaGTTTCCCATCTGGACCCACGCTCAGCATGTAGTTCACATGGAG | + |
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Preference number: 5 (lower is better) Translates to: VHILETIYHFCRVGE*FPIWTHAQHVVHME Trigger: CTCCATGTGAACTACATGCTGAGCGTGGGTCCAGATGGGAAACCATTCTCCTACCCTGCAGAAATGGTATATAGTTTCAAGGATGTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS CCA 90 bp | TCCCACATCCTTGAAACTATATACCATTTCTGCAGGGTAGGAGAATaGTTTCCCATCTGGACCCACGCTCAGCATGTAGTTCACATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SHILETIYHFCRVGE*FPIWTHAQHVVHME Trigger: CTCCATGTGAACTACATGCTGAGCGTGGGTCCAGATGGGAAACCATTCTCCTACCCTGCAGAAATGGTATATAGTTTCAAGGATGTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649549.1 |
||
| CDS TCA 90 bp | GATCTCCATGTAGTTCCCTTCAGAGAATCTTCCTCGAGGCCCATGTaGAATAGGGACAGGACATGGTATAGTTGTAGGTGGTTTCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: DLHVVPFRESSSRPM*NRDRTWYSCRWFLH Trigger: GTGAAGAAACCACCTACAACTATACCATGTCCTGTCCCTATTTCACATGGGCCTCGAGGAAGATTCTCTGAAGGGAACTACATGGAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000456119.5 |
||
| CDS TCA 90 bp | CTCACAATTCCCACATGTTGTAGAAGGAACCCAGTGGGAGGTAATTaGATCATGGGGGCAGGTCTTTCCTGTGCTTTTCTTGTGATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTIPTCCRRNPVGGN*IMGAGLSCAFLVIV Trigger: CACTATCACAAGAAAAGCACAGGAAAGACCTGCCCCCATGATTCAATTACCTCCCACTGGGTTCCTTCTACAACATGTGGGAATTGTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654739.1 |
||
| CDS GCA 90 bp | TCACTTGGTGTACTTACCCACATCCTTGAAACTATATACCATTTCTaGAGGGTAGGAGAATGGTTTCCCATCTGGACCCACGCTCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLGVLTHILETIYHF*RVGEWFPIWTHAQH Trigger: ATGCTGAGCGTGGGTCCAGATGGGAAACCATTCTCCTACCCTGCAGAAATGGTATATAGTTTCAAGGATGTGGGTAAGTACACCAAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS CCA 90 bp | TCTCAGCTGCTAGCTGAGGATATGTACCTATTTATTATGTTCCACTaGGGGCTGCCATCAAATTCTGGTGACTCTGACACCCAACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SQLLAEDMYLFIMFH*GLPSNSGDSDTQHL Trigger: CAAGTGTTGGGTGTCAGAGTCACCAGAATTTGATGGCAGCCCCCAGTGGAACATAATAAATAGGTACATATCCTCAGCTAGCAGCTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653306.1 ENST00000662620.1 |
||
| CDS CCA 90 bp | CCTTGCTTAAAGTTTGCAATGGAACCAGGATTCAGACCCATTAGATaGCACCCTGAAAATGCTTTGAGGATAGAACAGTGCCATCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PCLKFAMEPGFRPIR*HPENALRIEQCHLC Trigger: ACACAGATGGCACTGTTCTATCCTCAAAGCATTTTCAGGGTGCCATCTAATGGGTCTGAATCCTGGTTCCATTGCAAACTTTAAGCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS CCA 90 bp | CTGGAACTTTCCTGTTTTTATATCCTTTCCCTGCTATCTCTACATTaGGTACCTAATGACCTTGCTGGGAAGAAGGCCATGTCTGATTTA | + |
|
Preference number: 5 (lower is better) Translates to: LELSCFYILSLLSLH*VPNDLAGKKAMSDL Trigger: TAAATCAGACATGGCCTTCTTCCCAGCAAGGTCATTAGGTACCCAATGTAGAGATAGCAGGGAAAGGATATAAAAACAGGAAAGTTCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS TCA 90 bp | AACACAACCATAGTTCTCACAACCATCCTGTTTCCAACCATATTTTaGTCAAAGTCTGTTCTCTATTTTACCTGGCAGTCCTTGGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: NTTIVLTTILFPTIF*SKSVLYFTWQSLDE Trigger: CTCGTCCAAGGACTGCCAGGTAAAATAGAGAACAGACTTTGATCAAAATATGGTTGGAAACAGGATGGTTGTGAGAACTATGGTTGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS TCA 72 bp | GGCATCCAGGGGTCTGGGCGGAGCGAGAGGGTCGCTTaGGCGCCGAGGCCGGGGCCATGGCGACAGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GIQGSGRSERVA*APRPGPWRQEQ Trigger: CTGCTCCTGTCGCCATGGCCCCGGCCTCGGCGCTCAAGCGACCCTCTCGCTCCGCCCAGACCCCTGGATGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000607100.5 |
||
| CDS TCA 72 bp | CTCTCCACGAAGCCTGGGCGGAGCGAGAGGGTCGCTTaGGCGCCGAGGCCGGGGCCATGGCGACAGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSTKPGRSERVA*APRPGPWRQEQ Trigger: CTGCTCCTGTCGCCATGGCCCCGGCCTCGGCGCTCAAGCGACCCTCTCGCTCCGCCCAGGCTTCGTGGAGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000456119.5 |
||
| CDS GCA 72 bp | GATGCACAAGGCCTTCTTCATGCAGGATGGGGGCGGTaGTGTGGTTCTAGACTGGGATCAGCAGTGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DAQGLLHAGWGR*CGSRLGSAVGL Trigger: CAGGCCCACTGCTGATCCCAGTCTAGAACCACAGCACCGCCCCCATCCTGCATGAAGAAGGCCTTGTGCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS CCA 72 bp | GACGTGTTCCAAGTGCTCATCGAGAGCTCAGAACTCTaGGCAGCACTTAGGGCTATGGCGGTACCAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: DVFQVLIESSEL*AALRAMAVPGQ Trigger: CTGCCCTGGTACCGCCATAGCCCTAAGTGCTGCCCAGAGTTCTGAGCTCTCGATGAGCACTTGGAACACGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS CCA 72 bp | GAGGCCCTGGGACTGCCATACCACCATGCCATCTCCTaGTGGCAGGACAGCTTTCTTCTTCCACCTGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: EALGLPYHHAIS*WQDSFLLPPVL Trigger: AAGGACAGGTGGAAGAAGAAAGCTGTCCTGCCACCAGGAGATGGCATGGTGGTATGGCAGTCCCAGGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653306.1 ENST00000654739.1 ENST00000662620.1 |
||
| CDS CAA 72 bp | TCTAGACTGGGATCAGCAGTGGGCCTGAAGACAGGGTaGGGAGGTGGGATGAAGCAGCATGGGGACCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SRLGSAVGLKTG*GGGMKQHGDPE Trigger: TTCTGGGTCCCCATGCTGCTTCATCCCACCTCCCAACCCTGTCTTCAGGCCCACTGCTGATCCCAGTCTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS TCA 72 bp | AGGGCTAATGCAGGAACATGCAGGCCCCAGAGCTGTTaGAGCCATAGTCCTGCTTGGCCATGTGGCTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: RANAGTCRPQSC*SHSPAWPCGSP Trigger: TGGTGAGCCACATGGCCAAGCAGGACTATGGCTTCAACAGCTCTGGGGCCTGCATGTTCCTGCATTAGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000607100.5 ENST00000649549.1 |
||
| CDS TCA 72 bp | TTGGACGAGGCTGGGCTAAGCCTTTATGCTGCTCCTTaGGGTAGGACTTGGCTCCTGACCCCAGGGCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LDEAGLSLYAAP*GRTWLLTPGLF Trigger: GAAAAGCCCTGGGGTCAGGAGCCAAGTCCTACCTCAAGGAGCAGCATAAAGGCTTAGCCCAGCCTCGTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS CCA 72 bp | ACCAAGGCAGATGCACAAGGCCTTCTTCATGCAGGATaGGGGCGGTGCTGTGGTTCTAGACTGGGATCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TKADAQGLLHAG*GRCCGSRLGSA Trigger: TGCTGATCCCAGTCTAGAACCACAGCACCGCCCCCATCCTGCATGAAGAAGGCCTTGTGCATCTGCCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS CCA 72 bp | ATTCTTACCACCCTCCTCAGAGGCTGCTTCAGGGTCTaGCCAGGAAGGGCCCCAAACAAGAGGCCTACATCT | + |
|
Preference number: 6 (lower is better) Translates to: ILTTLLRGCFRV*PGRAPNKRPTS Trigger: AGATGTAGGCCTCTTGTTTGGGGCCCTTCCTGGCCAGACCCTGAAGCAGCCTCTGAGGAGGGTGGTAAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS GCA 72 bp | GGCAAAGGAGAAGCAGGCACCTCCTTGAGCTACTCTTaGCTGGATCTCCAGTGTCTGTCTGCTCTCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GKGEAGTSLSYS*LDLQCLSALSE Trigger: CTCAGAGAGAGCAGACAGACACTGGAGATCCAGGCAAGAGTAGCTCAAGGAGGTGCCTGCTTCTCCTTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654739.1 |
||
| CDS CCA 72 bp | TGGGATGCTGGAACATCACCTGCCATAGCTTGTAAGTaGTTCCTGAGCCTGACAGACAGGAGCGGGGTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: WDAGTSPAIACK*FLSLTDRSGVD Trigger: GTCAACCCCGCTCCTGTCTGTCAGGCTCAGGAACCACTTACAAGCTATGGCAGGTGATGTTCCAGCATCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000456119.5 ENST00000607100.5 ENST00000649549.1 |
||
| CDS TCA 72 bp | TCTGGGTGCCACAAACTTCACCAGCTTCTTGACCAATaGGGGGTATTGGACCTTCTCACCCTGGGAGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SGCHKLHQLLDQ*GVLDLLTLGDR Trigger: CCTGTCTCCCAGGGTGAGAAGGTCCAATACCCCTCATTGGTCAAGAAGCTGGTGAAGTTTGTGGCACCCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000449086.5 ENST00000655598.1 |
||
| CDS TCA 72 bp | AGGAACGCAGAGTTTCAAGGGCGGCAGGGGCTCGCATaGCATGCTTTCCACAGTTCCCACTCAGATCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: RNAEFQGRQGLA*HAFHSSHSDLD Trigger: ATCAAGATCTGAGTGGGAACTGTGGAAAGCATGTCATGCGAGCCCCTGCCGCCCTTGAAACTCTGCGTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000449086.5 ENST00000649549.1 ENST00000655598.1 |
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| CDS GCA 72 bp | AAGGGCCTCTGCAGCGGAGTGCCAGGAGTTGTCCCTTaGTTTAGGAGAGGCAAGATCAGTGAGATAGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: KGLCSGVPGVVP*FRRGKISEIEH Trigger: GTGTTCTATCTCACTGATCTTGCCTCTCCTAAAGCAAGGGACAACTCCTGGCACTCCGCTGCAGAGGCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS GCA 72 bp | AAATTCCAACAGGCTTCAAGGGCCTCTGCAGCGGAGTaGCAGGAGTTGTCCCTTGCTTTAGGAGAGGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: KFQQASRASAAE*QELSLALGEAR Trigger: TCTTGCCTCTCCTAAAGCAAGGGACAACTCCTGGCACTCCGCTGCAGAGGCCCTTGAAGCCTGTTGGAATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS CCA 72 bp | TGGTTAGGACAGTGGGGAGATAGGGGATTTGGGCTCTaGTCCAGCTCCATACTATGCCAGCTGTGTGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: WLGQWGDRGFGL*SSSILCQLCDG Trigger: TCCATCACACAGCTGGCATAGTATGGAGCTGGACCAGAGCCCAAATCCCCTATCTCCCCACTGTCCTAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
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| CDS CCA 72 bp | TCGATCATCTCCCCAGGGAGTACAGACCAGTCAGCCTaGAAAGATCTCACCAAGGCAGATGCACAAGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SIISPGSTDQSA*KDLTKADAQGL Trigger: AAGGCCTTGTGCATCTGCCTTGGTGAGATCTTTCCAGGCTGACTGGTCTGTACTCCCTGGGGAGATGATCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS CCA 72 bp | GCATATAAGTCCTGGAGTCACTCCTTCTCTCTCCTCTaGATAGTACTGGCCACCACAATGCCCGTCAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: AYKSWSHSFSLL*IVLATTMPVRV Trigger: GACCCTGACGGGCATTGTGGTGGCCAGTACTATCCAGAGGAGAGAGAAGGAGTGACTCCAGGACTTATATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000449086.5 ENST00000649549.1 ENST00000655598.1 |
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| CDS CCA 72 bp | ACTCCCAGCGTGGAGCATTTACCCAGGGGGTGGAGATaGTCACAAAGATGTCACTGGAAGACTCATGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TPSVEHLPRGWR*SQRCHWKTHVE Trigger: CTCCACATGAGTCTTCCAGTGACATCTTTGTGACCATCTCCACCCCCTGGGTAAATGCTCCACGCTGGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS CAA 72 bp | CACAGGAACAGTCAGGCACTCTCCACGTGGTCCTCTTaGGGGCTTCGTTCACACCAAAGGATCATCCCAATC | + |
|
Preference number: 6 (lower is better) Translates to: HRNSQALSTWSS*GLRSHQRIIPI Trigger: GATTGGGATGATCCTTTGGTGTGAACGAAGCCCCAAAGAGGACCACGTGGAGAGTGCCTGACTGTTCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000607100.5 ENST00000649549.1 |
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| CDS CAA 72 bp | GGTACCACGGCTGGTGACGTCAAGTCAGAAGAAGGTTaGGTTGCTGCTAGACTCTGTTGGCTTGCAGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GTTAGDVKSEEG*VAARLCWLAGA Trigger: TGCACCTGCAAGCCAACAGAGTCTAGCAGCAACCAAACCTTCTTCTGACTTGACGTCACCAGCCGTGGTACC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS CAA 90 bp | TGGGGAAGAGAGTCATGCCAGAGAATCTCTAAGTCAGACTGTGTTTaGTGGACTCCCAGCGTGGAGCATTTACCCAGGGGGTGGAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: WGRESCQRISKSDCV*WTPSVEHLPRGWRW Trigger: CCATCTCCACCCCCTGGGTAAATGCTCCACGCTGGGAGTCCACAAAACACAGTCTGACTTAGAGATTCTCTGGCATGACTCTCTTCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS TCA 72 bp | GCTGAAGGCAAAACCTGGATACTATCTGAGGCATGGTaGTCAGGTTGGGGGCCCTGCCTTCAAGAAAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: AEGKTWILSEAW*SGWGPCLQESQ Trigger: CTGACTTTCTTGAAGGCAGGGCCCCCAACCTGATCACCATGCCTCAGATAGTATCCAGGTTTTGCCTTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS TCA 72 bp | GCCTTTATGCTGCTCCTTGAGGTAGGACTTGGCTCCTaGCCCCAGGGCTTTTCACAAGTTACCTCAGACACA | + |
|
Preference number: 6 (lower is better) Translates to: AFMLLLEVGLGS*PQGFSQVTSDT Trigger: TGTGTCTGAGGTAACTTGTGAAAAGCCCTGGGGTCAGGAGCCAAGTCCTACCTCAAGGAGCAGCATAAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS TCA 72 bp | AAGCAGGCACCTCCTTCACAGGGTGGCAGGATGGAGTaGGTGCAAGCAGGGGACATGTCAGACACTTATAAA | + |
|
Preference number: 6 (lower is better) Translates to: KQAPPSQGGRME*VQAGDMSDTYK Trigger: TTTATAAGTGTCTGACATGTCCCCTGCTTGCACTCACTCCATCCTGCCACCCTGTGAAGGAGGTGCCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653306.1 ENST00000662620.1 |
||
| CDS CCA 72 bp | AGAAGACATCACAGGAACAGTCAGGCACTCTCCACGTaGTCCTCTTTGGGGCTTCGTTCACACCAAAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: RRHHRNSQALST*SSLGLRSHQRI Trigger: GATCCTTTGGTGTGAACGAAGCCCCAAAGAGGACCACGTGGAGAGTGCCTGACTGTTCCTGTGATGTCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000607100.5 ENST00000649549.1 |
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| CDS CCA 72 bp | AGGTGCAATCCTTCAGTGTGGCCTTGCACATGTCAATaGAAGGGTCTGTGGCCATCATGGAAGAGATGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RCNPSVWPCTCQ*KGLWPSWKRWP Trigger: TGGCCATCTCTTCCATGATGGCCACAGACCCTTCCATTGACATGTGCAAGGCCACACTGAAGGATTGCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS CCA 72 bp | GTACCACGGCTGGTGACGTCAAGTCAGAAGAAGGTTTaGTTGCTGCTAGACTCTGTTGGCTTGCAGGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: VPRLVTSSQKKV*LLLDSVGLQVQ Trigger: TTGCACCTGCAAGCCAACAGAGTCTAGCAGCAACCAAACCTTCTTCTGACTTGACGTCACCAGCCGTGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS CCA 72 bp | CCACAATGCCCGTCAGGGTCCAAGTGTAGGCAGGATTaGGTCAGGTGGTACAGATACACCTCTTTGAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: PQCPSGSKCRQD*VRWYRYTSLNL Trigger: CAGATTCAAAGAGGTGTATCTGTACCACCTGACCCAATCCTGCCTACACTTGGACCCTGACGGGCATTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449086.5 ENST00000655598.1 |
||
| CDS CCA 72 bp | TCATGCCAGAGAATCTCTAAGTCAGACTGTGTTTTGTaGACTCCCAGCGTGGAGCATTTACCCAGGGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SCQRISKSDCVL*TPSVEHLPRGW Trigger: CCACCCCCTGGGTAAATGCTCCACGCTGGGAGTCCACAAAACACAGTCTGACTTAGAGATTCTCTGGCATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS CAA 72 bp | TGTGTGATGGAGCTCCTCTCAGAGCCTAATGCCACCTaGAGTTTTACCCATCTTGCAGAGCTGTGGGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CVMELLSEPNAT*SFTHLAELWGS Trigger: TGAGCCCCACAGCTCTGCAAGATGGGTAAAACTCAAGGTGGCATTAGGCTCTGAGAGGAGCTCCATCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS CAA 72 bp | TCTGTTGGCTTGCAGGTGCAATCCTTCAGTGTGGCCTaGCACATGTCAATGGAAGGGTCTGTGGCCATCATG | + |
|
Preference number: 6 (lower is better) Translates to: SVGLQVQSFSVA*HMSMEGSVAIM Trigger: CATGATGGCCACAGACCCTTCCATTGACATGTGCAAGGCCACACTGAAGGATTGCACCTGCAAGCCAACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS CAA 72 bp | GAGTCATGCCAGAGAATCTCTAAGTCAGACTGTGTTTaGTGGACTCCCAGCGTGGAGCATTTACCCAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ESCQRISKSDCV*WTPSVEHLPRG Trigger: CCCCCTGGGTAAATGCTCCACGCTGGGAGTCCACAAAACACAGTCTGACTTAGAGATTCTCTGGCATGACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS CAA 90 bp | CTGCTAGACTCTGTTGGCTTGCAGGTGCAATCCTTCAGTGTGGCCTaGCACATGTCAATGGAAGGGTCTGTGGCCATCATGGAAGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: LLDSVGLQVQSFSVA*HMSMEGSVAIMEEM Trigger: CATCTCTTCCATGATGGCCACAGACCCTTCCATTGACATGTGCAAGGCCACACTGAAGGATTGCACCTGCAAGCCAACAGAGTCTAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS CAA 90 bp | ACTGAGGTACCACGGCTGGTGACGTCAAGTCAGAAGAAGGTTTGGTaGCTGCTAGACTCTGTTGGCTTGCAGGTGCAATCCTTCAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TEVPRLVTSSQKKVW*LLDSVGLQVQSFSV Trigger: CACACTGAAGGATTGCACCTGCAAGCCAACAGAGTCTAGCAGCAACCAAACCTTCTTCTGACTTGACGTCACCAGCCGTGGTACCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS CAA 90 bp | AGAAGACATCACAGGAACAGTCAGGCACTCTCCACGTGGTCCTCTTaGGGGCTTCGTTCACACCAAAGGATCATCCCAATCCTGCAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: RRHHRNSQALSTWSS*GLRSHQRIIPILQN Trigger: GTTTTGCAGGATTGGGATGATCCTTTGGTGTGAACGAAGCCCCAAAGAGGACCACGTGGAGAGTGCCTGACTGTTCCTGTGATGTCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000607100.5 ENST00000649549.1 |
||
| CDS CAA 90 bp | CACTGGGGGCTGCCATCAAATTCTGGTGACTCTGACACCCAACACTaGTCCAGGAGTAATTCTGCTGAGGCATCTGCAAAGCTCATCAGT | + |
|
Preference number: 6 (lower is better) Translates to: HWGLPSNSGDSDTQH*SRSNSAEASAKLIS Trigger: ACTGATGAGCTTTGCAGATGCCTCAGCAGAATTACTCCTGGACAAGTGTTGGGTGTCAGAGTCACCAGAATTTGATGGCAGCCCCCAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000653306.1 ENST00000655598.1 ENST00000662620.1 |
||
| CDS GCA 72 bp | GGACTCCATCTTTGGAGAGCATCTTGGTGTTCAACATaGTTTCACTCTTCAGCCTCCTTAGAGGGGGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GLHLWRASWCST*FHSSASLEGAS Trigger: ACTGGCCCCCTCTAAGGAGGCTGAAGAGTGAAAGCATGTTGAACACCAAGATGCTCTCCAAAGATGGAGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS GCA 72 bp | GGCTTGAGGCTGGAAGAGATAGCCTACTATCTGTTCTaGTGGTCTTCTCCATTGGTTGGTGGGCTATGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLRLEEIAYYLF*WSSPLVGGLCA Trigger: TGCACATAGCCCACCAACCAATGGAGAAGACCAGCAGAACAGATAGTAGGCTATCTCTTCCAGCCTCAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653306.1 ENST00000654739.1 ENST00000662620.1 |
||
| CDS CCA 72 bp | TACCATTTCTGCAGGGTAGGAGAATGGTTTCCCATCTaGACCCACGCTCAGCATGTAGTTCACATGGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: YHFCRVGEWFPI*THAQHVVHMED Trigger: GTCCTCCATGTGAACTACATGCTGAGCGTGGGTCCAGATGGGAAACCATTCTCCTACCCTGCAGAAATGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000607100.5 ENST00000649549.1 |
||
| CDS CCA 72 bp | AGGAGAAGTCTACCAAGGTTAATATTTCAGGGGTGGTaGCACCTGGGAGGGAAGACTGTATGGGGTACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RRSLPRLIFQGW*HLGGKTVWGTL Trigger: CAACGTACCCCATACAGTCTTCCCTCCCAGGTGCCACCACCCCTGAAATATTAACCTTGGTAGACTTCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS CCA 72 bp | TCTCTAAGTCAGACTGTGTTTTGTGGACTCCCAGCGTaGAGCATTTACCCAGGGGGTGGAGATGGTCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: SLSQTVFCGLPA*SIYPGGGDGHK Trigger: TTTGTGACCATCTCCACCCCCTGGGTAAATGCTCCACGCTGGGAGTCCACAAAACACAGTCTGACTTAGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS CCA 72 bp | GCAAACTATACACTGGCATTCTCTTCCCTAGTCAGCTaGAATTTCCTGAGGACAGGGGTGGGGACAACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ANYTLAFSSLVS*NFLRTGVGTTV Trigger: CACTGTTGTCCCCACCCCTGTCCTCAGGAAATTCCAGCTGACTAGGGAAGAGAATGCCAGTGTATAGTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654739.1 |
||
| CDS CAA 72 bp | CCTGGTGGCAGGACAGCTTTCTTCTTCCACCTGTCCTaGTGCCTGTCCTCTTGGGCCAATGTTTCTTTAACT | + |
|
Preference number: 6 (lower is better) Translates to: PGGRTAFFFHLS*CLSSWANVSLT Trigger: AGTTAAAGAAACATTGGCCCAAGAGGACAGGCACAAGGACAGGTGGAAGAAGAAAGCTGTCCTGCCACCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653306.1 ENST00000654739.1 ENST00000662620.1 |
||
| CDS TCA 72 bp | AGATCAGCAATGGCAGTTTCTCAGGTTACAGCTGTGTaGGGTCTGTGTTCACGGCCTTGGGTTCTGAAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RSAMAVSQVTAV*GLCSRPWVLKC Trigger: ACACTTCAGAACCCAAGGCCGTGAACACAGACCTCACACAGCTGTAACCTGAGAAACTGCCATTGCTGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS TCA 72 bp | GCCTTCTTCCTTGCTAGTAATATGTCCGCTGGTACTTaGGAAGCCAGGCAACATGGCTTAAGCCAGGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: AFFLASNMSAGT*EARQHGLSQAS Trigger: AGATGCCTGGCTTAAGCCATGTTGCCTGGCTTCTCAAGTACCAGCGGACATATTACTAGCAAGGAAGAAGGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS TCA 72 bp | CTTGTGCCTGTCCTCTTGGGCCAATGTTTCTTTAACTaGGTAGTAGCAGAGCAGCATCAGCCTAGGACAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LVPVLLGQCFFN*VVAEQHQPRTS Trigger: GCTTGTCCTAGGCTGATGCTGCTCTGCTACTACTCAGTTAAAGAAACATTGGCCCAAGAGGACAGGCACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653306.1 ENST00000654739.1 ENST00000662620.1 |
||
| CDS TCA 72 bp | TTGTCCCCCAAAGTATACTCCAGAACACCCTTACCTTaGGCTACTCTTGCCTGGATCTCCAGTGTCTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSPKVYSRTPLP*ATLAWISSVCL Trigger: CAGACAGACACTGGAGATCCAGGCAAGAGTAGCTCAAGGTAAGGGTGTTCTGGAGTATACTTTGGGGGACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653306.1 |
||
| CDS GCA 72 bp | AGTATACTCCAGAACACCCTTACCTTGAGCTACTCTTaGCTGGATCTCCAGTGTCTGTCTGCTCTCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SILQNTLTLSYS*LDLQCLSALSE Trigger: CTCAGAGAGAGCAGACAGACACTGGAGATCCAGGCAAGAGTAGCTCAAGGTAAGGGTGTTCTGGAGTATACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653306.1 |
||
| CDS CCA 72 bp | AAGTCAGAAGAAGGTTTGGTTGCTGCTAGACTCTGTTaGCTTGCAGGTGCAATCCTTCAGTGTGGCCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: KSEEGLVAARLC*LAGAILQCGLA Trigger: TGCAAGGCCACACTGAAGGATTGCACCTGCAAGCCAACAGAGTCTAGCAGCAACCAAACCTTCTTCTGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS CCA 72 bp | TTGAGGCTGGAAGAGATAGCCTACTATCTGTTCTGCTaGTCTTCTCCATTGGTTGGTGGGCTATGTGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: LRLEEIAYYLFC*SSPLVGGLCAW Trigger: CCATGCACATAGCCCACCAACCAATGGAGAAGACCAGCAGAACAGATAGTAGGCTATCTCTTCCAGCCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653306.1 ENST00000654739.1 ENST00000662620.1 |
||
| CDS CAA 72 bp | GGGCATGAAAGGAGTTCTGTTTTGACCACCATCAACTaGGTCACATGCCAATCAGTGTCTGACCACGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GHERSSVLTTIN*VTCQSVSDHVC Trigger: GCACACGTGGTCAGACACTGATTGGCATGTGACCAAGTTGATGGTGGTCAAAACAGAACTCCTTTCATGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000607100.5 ENST00000649549.1 |
||
| CDS CAA 90 bp | AGGGAGGCAAAGAGACTTCAACGTCTCAACTTAGGAATGACAGCATaGGGGCTTGAGGCTGGAAGAGATAGCCTACTATCTGTTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: REAKRLQRLNLGMTA*GLEAGRDSLLSVLL Trigger: CAGCAGAACAGATAGTAGGCTATCTCTTCCAGCCTCAAGCCCCAATGCTGTCATTCCTAAGTTGAGACGTTGAAGTCTCTTTGCCTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653306.1 ENST00000654739.1 ENST00000662620.1 |
||
| CDS TCA 72 bp | TGGTATAGTTGTAGGTGGTTTCTTCACCAGCTTCCATaGACCCAGACACCTCGATGTTCACACTGGTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: WYSCRWFLHQLP*TQTPRCSHWLT Trigger: GGTCAACCAGTGTGAACATCGAGGTGTCTGGGTTCATGGAAGCTGGTGAAGAAACCACCTACAACTATACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000456119.5 |
||
| CDS TCA 72 bp | GTAGTTCCCTTCAGAGAATCTTCCTCGAGGCCCATGTaGAATAGGGACAGGACATGGTATAGTTGTAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VVPFRESSSRPM*NRDRTWYSCRW Trigger: CCACCTACAACTATACCATGTCCTGTCCCTATTTCACATGGGCCTCGAGGAAGATTCTCTGAAGGGAACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000456119.5 |
||
| CDS TCA 72 bp | ACACTGGGAAGCTGTTGTCACGTGTCATTCATGGAATaGTGTACAGGTCATCTTGGACAGGACCAGCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: TLGSCCHVSFME*CTGHLGQDQHS Trigger: ACTGTGCTGGTCCTGTCCAAGATGACCTGTACATCATTCCATGAATGACACGTGACAACAGCTTCCCAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS TCA 72 bp | CCCACATGTTGTAGAAGGAACCCAGTGGGAGGTAATTaGATCATGGGGGCAGGTCTTTCCTGTGCTTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PTCCRRNPVGGN*IMGAGLSCAFL Trigger: AAGAAAAGCACAGGAAAGACCTGCCCCCATGATTCAATTACCTCCCACTGGGTTCCTTCTACAACATGTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654739.1 |
||
| CDS GCA 72 bp | TGGGGCTTCGTTCACACCAAAGGATCATCCCAATCCTaGAAAACTTCAACGGAAGTGGCAGGGAACATAGTA | + |
|
Preference number: 6 (lower is better) Translates to: WGFVHTKGSSQS*KTSTEVAGNIV Trigger: TACTATGTTCCCTGCCACTTCCGTTGAAGTTTTGCAGGATTGGGATGATCCTTTGGTGTGAACGAAGCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000607100.5 ENST00000649549.1 |
||
| CDS CAA 72 bp | CCAAGACCATCCATGAGTCCAGGACCAGCACCTCACTaGGTGTACTTACCCACATCCTTGAAACTATATACC | + |
|
Preference number: 6 (lower is better) Translates to: PRPSMSPGPAPH*VYLPTSLKLYT Trigger: GGTATATAGTTTCAAGGATGTGGGTAAGTACACCAAGTGAGGTGCTGGTCCTGGACTCATGGATGGTCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS CAA 72 bp | GGATTCAGACCCATTAGATGGCACCCTGAAAATGCTTaGAGGATAGAACAGTGCCATCTGTGTGGCAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GFRPIRWHPENA*RIEQCHLCGSK Trigger: CTTGCTGCCACACAGATGGCACTGTTCTATCCTCAAAGCATTTTCAGGGTGCCATCTAATGGGTCTGAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS CAA 90 bp | GAAGCTTGTGGGCATGAAAGGAGTTCTGTTTTGACCACCATCAACTaGGTCACATGCCAATCAGTGTCTGACCACGTGTGCTCCAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: EACGHERSSVLTTIN*VTCQSVSDHVCSKN Trigger: ATTCTTGGAGCACACGTGGTCAGACACTGATTGGCATGTGACCAAGTTGATGGTGGTCAAAACAGAACTCCTTTCATGCCCACAAGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000607100.5 ENST00000649549.1 |
||
| CDS CAA 90 bp | ATGACCTTGCTGGGAAGAAGGCCATGTCTGATTTATACCAAGGTCTaGATACCACTGGCTACCCTTACTGTGACCTTGACAGGAGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: MTLLGRRPCLIYTKV*IPLATLTVTLTGEV Trigger: GACTTCTCCTGTCAAGGTCACAGTAAGGGTAGCCAGTGGTATCAAGACCTTGGTATAAATCAGACATGGCCTTCTTCCCAGCAAGGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS CAA 90 bp | ATGGAACCAGGATTCAGACCCATTAGATGGCACCCTGAAAATGCTTaGAGGATAGAACAGTGCCATCTGTGTGGCAGCAAGCCTTCAACA | + |
|
Preference number: 6 (lower is better) Translates to: MEPGFRPIRWHPENA*RIEQCHLCGSKPST Trigger: TGTTGAAGGCTTGCTGCCACACAGATGGCACTGTTCTATCCTCAAAGCATTTTCAGGGTGCCATCTAATGGGTCTGAATCCTGGTTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS CAA 90 bp | TGTTGGGTACCAAGACCATCCATGAGTCCAGGACCAGCACCTCACTaGGTGTACTTACCCACATCCTTGAAACTATATACCATTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CWVPRPSMSPGPAPH*VYLPTSLKLYTISA Trigger: TGCAGAAATGGTATATAGTTTCAAGGATGTGGGTAAGTACACCAAGTGAGGTGCTGGTCCTGGACTCATGGATGGTCTTGGTACCCAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS TCA 72 bp | CGCATGACATGCTTTCCACAGTTCCCACTCAGATCTTaGTCTTCTTTTGGCTTGTGGGCATATAAGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RMTCFPQFPLRS*SSFGLWAYKSW Trigger: CCAGGACTTATATGCCCACAAGCCAAAAGAAGATCAAGATCTGAGTGGGAACTGTGGAAAGCATGTCATGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000449086.5 ENST00000649549.1 ENST00000655598.1 |
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| CDS GCA 72 bp | AGGAGTTCTGTTTTGACCACCATCAACTTGGTCACATaGCAATCAGTGTCTGACCACGTGTGCTCCAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: RSSVLTTINLVT*QSVSDHVCSKN Trigger: ATTCTTGGAGCACACGTGGTCAGACACTGATTGGCATGTGACCAAGTTGATGGTGGTCAAAACAGAACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000607100.5 ENST00000649549.1 |
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| CDS GCA 72 bp | AACAGCTGCTTCTATACTGGGTTTCCAATCCCAGGATaGAGACAAGCCACTTGTGAGGAGTTACTTCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: NSCFYTGFPIPG*RQATCEELLLC Trigger: ACACAGAAGTAACTCCTCACAAGTGGCTTGTCTGCATCCTGGGATTGGAAACCCAGTATAGAAGCAGCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
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| CDS CCA 72 bp | TCACAAAGATGTCACTGGAAGACTCATGTGGAGAAGTaGGACAAGCTGGGCTTGACAAGTAGGACAAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SQRCHWKTHVEK*DKLGLTSRTSH Trigger: ATGACTTGTCCTACTTGTCAAGCCCAGCTTGTCCCACTTCTCCACATGAGTCTTCCAGTGACATCTTTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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| CDS CCA 72 bp | ACTTCCATTCATACAGTGGCCATCTCACCTGTAGTCTaGATATCTTGTAATTGTGGGCCAGCCCTTCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSIHTVAISPVV*ISCNCGPALHS Trigger: GCTATGAAGGGCTGGCCCACAATTACAAGATATCCAGACTACAGGTGAGATGGCCACTGTATGAATGGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654739.1 |
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| CDS CAA 72 bp | CTGGGAAGAAGGCCATGTCTGATTTATACCAAGGTCTaGATACCACTGGCTACCCTTACTGTGACCTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: LGRRPCLIYTKV*IPLATLTVTLT Trigger: TGTCAAGGTCACAGTAAGGGTAGCCAGTGGTATCAAGACCTTGGTATAAATCAGACATGGCCTTCTTCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS CAA 72 bp | GAGATAGCCTACTATCTGTTCTGCTGGTCTTCTCCATaGGTTGGTGGGCTATGTGCATGGTGGATCATGATT | + |
|
Preference number: 6 (lower is better) Translates to: EIAYYLFCWSSP*VGGLCAWWIMI Trigger: AATCATGATCCACCATGCACATAGCCCACCAACCAATGGAGAAGACCAGCAGAACAGATAGTAGGCTATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653306.1 ENST00000654739.1 ENST00000662620.1 |
||
| CDS TCA 72 bp | GACCAGCACCTCACTTGGTGTACTTACCCACATCCTTaGAACTATATACCATTTCTGCAGGGTAGGAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: DQHLTWCTYPHP*NYIPFLQGRRM Trigger: CATTCTCCTACCCTGCAGAAATGGTATATAGTTTCAAGGATGTGGGTAAGTACACCAAGTGAGGTGCTGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS TCA 72 bp | TTGTATGAGCAGCCACCCATTCTCTGTATTACTTCATaGGTCTGCCAACAGCTGCTTCTATACTGGGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LYEQPPILCITS*VCQQLLLYWVS Trigger: GGAAACCCAGTATAGAAGCAGCTGTTGGCAGACTCATGAAGTAATACAGAGAATGGGTGGCTGCTCATACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS GCA 72 bp | CCATTCTCTGTATTACTTCATGAGTCTGCCAACAGCTaGTTCTATACTGGGTTTCCAATCCCAGGATGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PFSVLLHESANS*FYTGFPIPGCR Trigger: TCTGCATCCTGGGATTGGAAACCCAGTATAGAAGCAGCTGTTGGCAGACTCATGAAGTAATACAGAGAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS GCA 72 bp | ATAGAACACTTCCAACAGAACAGTGGGGCTGACAAGTaGTGGGTTAAATGTGCTTATTACACTGGGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: IEHFQQNSGADK*WVKCAYYTGKL Trigger: CAGCTTCCCAGTGTAATAAGCACATTTAACCCAGCACTTGTCAGCCCCACTGTTCTGTTGGAAGTGTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS CCA 72 bp | CTTGAAACTATATACCATTTCTGCAGGGTAGGAGAATaGTTTCCCATCTGGACCCACGCTCAGCATGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LETIYHFCRVGE*FPIWTHAQHVV Trigger: AACTACATGCTGAGCGTGGGTCCAGATGGGAAACCATTCTCCTACCCTGCAGAAATGGTATATAGTTTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000607100.5 ENST00000649549.1 |
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| CDS CCA 72 bp | CTCAGAAGAGAAGGACTCCATCTTTGGAGAGCATCTTaGTGTTCAACATGCTTTCACTCTTCAGCCTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LRREGLHLWRAS*CSTCFHSSASL Trigger: TAAGGAGGCTGAAGAGTGAAAGCATGTTGAACACCAAGATGCTCTCCAAAGATGGAGTCCTTCTCTTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS CCA 72 bp | CTAGCTGAGGATATGTACCTATTTATTATGTTCCACTaGGGGCTGCCATCAAATTCTGGTGACTCTGACACC | + |
|
Preference number: 6 (lower is better) Translates to: LAEDMYLFIMFH*GLPSNSGDSDT Trigger: GGTGTCAGAGTCACCAGAATTTGATGGCAGCCCCCAGTGGAACATAATAAATAGGTACATATCCTCAGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653306.1 ENST00000662620.1 |
||
| CDS CAA 72 bp | AAGAGACTTCAACGTCTCAACTTAGGAATGACAGCATaGGGGCTTGAGGCTGGAAGAGATAGCCTACTATCT | + |
|
Preference number: 6 (lower is better) Translates to: KRLQRLNLGMTA*GLEAGRDSLLS Trigger: AGATAGTAGGCTATCTCTTCCAGCCTCAAGCCCCAATGCTGTCATTCCTAAGTTGAGACGTTGAAGTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653306.1 ENST00000654739.1 ENST00000662620.1 |
||
| CDS CAA 72 bp | TTGGTGAACTCATGGACAACTTTCTTCTTCTGCCCTTaGTCCCCCAAAGTATACTCCAGAACACCCTTACCT | + |
|
Preference number: 6 (lower is better) Translates to: LVNSWTTFFFCP*SPKVYSRTPLP Trigger: AGGTAAGGGTGTTCTGGAGTATACTTTGGGGGACAAAGGGCAGAAGAAGAAAGTTGTCCATGAGTTCACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653306.1 |
||
| CDS CAA 90 bp | GAACATAGTAATACTGAAGCTTGTGGGCATGAAAGGAGTTCTGTTTaGACCACCATCAACTTGGTCACATGCCAATCAGTGTCTGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: EHSNTEACGHERSSV*TTINLVTCQSVSDH Trigger: GTGGTCAGACACTGATTGGCATGTGACCAAGTTGATGGTGGTCAAAACAGAACTCCTTTCATGCCCACAAGCTTCAGTATTACTATGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000607100.5 ENST00000649549.1 |
||
| CDS CAA 90 bp | GCTGACAAGTGCTGGGTTAAATGTGCTTATTACACTGGGAAGCTGTaGTCACGTGTCATTCATGGAATGATGTACAGGTCATCTTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: ADKCWVKCAYYTGKL*SRVIHGMMYRSSWT Trigger: TGTCCAAGATGACCTGTACATCATTCCATGAATGACACGTGACAACAGCTTCCCAGTGTAATAAGCACATTTAACCCAGCACTTGTCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449086.5 |
||
| CDS GCA 72 bp | AGGATATGTACCTATTTATTATGTTCCACTGGGGGCTaGCATCAAATTCTGGTGACTCTGACACCCAACACT | + |
|
Preference number: 6 (lower is better) Translates to: RICTYLLCSTGG*HQILVTLTPNT Trigger: AGTGTTGGGTGTCAGAGTCACCAGAATTTGATGGCAGCCCCCAGTGGAACATAATAAATAGGTACATATCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000653306.1 ENST00000662620.1 |
||
| CDS CCA 72 bp | TCCTGTTTTTATATCCTTTCCCTGCTATCTCTACATTaGGTACCTAATGACCTTGCTGGGAAGAAGGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SCFYILSLLSLH*VPNDLAGKKAM Trigger: CATGGCCTTCTTCCCAGCAAGGTCATTAGGTACCCAATGTAGAGATAGCAGGGAAAGGATATAAAAACAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS CCA 72 bp | AAGTTTGCAATGGAACCAGGATTCAGACCCATTAGATaGCACCCTGAAAATGCTTTGAGGATAGAACAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: KFAMEPGFRPIR*HPENALRIEQC Trigger: GCACTGTTCTATCCTCAAAGCATTTTCAGGGTGCCATCTAATGGGTCTGAATCCTGGTTCCATTGCAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS CCA 72 bp | CTACTATCTGTTCTGCTGGTCTTCTCCATTGGTTGGTaGGCTATGTGCATGGTGGATCATGATTTAGTTATG | + |
|
Preference number: 6 (lower is better) Translates to: LLSVLLVFSIGW*AMCMVDHDLVM Trigger: CATAACTAAATCATGATCCACCATGCACATAGCCCACCAACCAATGGAGAAGACCAGCAGAACAGATAGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653306.1 ENST00000654739.1 ENST00000662620.1 |
||
| CDS CAA 72 bp | AATACTGAAGCTTGTGGGCATGAAAGGAGTTCTGTTTaGACCACCATCAACTTGGTCACATGCCAATCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: NTEACGHERSSV*TTINLVTCQSV Trigger: CACTGATTGGCATGTGACCAAGTTGATGGTGGTCAAAACAGAACTCCTTTCATGCCCACAAGCTTCAGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000433669.2 ENST00000449086.5 ENST00000607100.5 ENST00000649549.1 |
||
| CDS CAA 72 bp | TTTCCCTGCTATCTCTACATTGGGTACCTAATGACCTaGCTGGGAAGAAGGCCATGTCTGATTTATACCAAG | + |
|
Preference number: 6 (lower is better) Translates to: FPCYLYIGYLMT*LGRRPCLIYTK Trigger: CTTGGTATAAATCAGACATGGCCTTCTTCCCAGCAAGGTCATTAGGTACCCAATGTAGAGATAGCAGGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433669.2 ENST00000607100.5 |
||
| CDS TCA 72 bp | ATAACCCAAGATTTTAGAGCATATGGAGAACATGGGTaGTACGGTTTGGCTGTGTCTCCACCCAAATGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: ITQDFRAYGEHG*YGLAVSPPKCH Trigger: ATGACATTTGGGTGGAGACACAGCCAAACCGTATCACCCATGTTCTCCATATGCTCTAAAATCTTGGGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654739.1 |
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| CDS CCA 72 bp | ATTTTAGAGCATATGGAGAACATGGGTGATACGGTTTaGCTGTGTCTCCACCCAAATGTCATCTTGAATTGT | + |
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Preference number: 6 (lower is better) Translates to: ILEHMENMGDTV*LCLHPNVILNC Trigger: ACAATTCAAGATGACATTTGGGTGGAGACACAGCCAAACCGTATCACCCATGTTCTCCATATGCTCTAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654739.1 |
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| CDS CAA 90 bp | GAACACAACCATAGTTCTCACAACCATCCTGTTTCCAACCATATTTaGATCAAAGTCTGTTCTCTATTTTACCTGGCAGTCCTTGGACGA | + |
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Preference number: 6 (lower is better) Translates to: EHNHSSHNHPVSNHI*IKVCSLFYLAVLGR Trigger: TCGTCCAAGGACTGCCAGGTAAAATAGAGAACAGACTTTGATCAAAATATGGTTGGAAACAGGATGGTTGTGAGAACTATGGTTGTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449086.5 |
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