RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC00951 (Homo sapiens)

Ensembl gene IDs: ENSG00000204092

Ensembl transcript IDs: ENST00000373171.2

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GGTTGCATCCCCACAGCTGTGATTCTGAGACCAGGAGACAGCTGCTaGCCCTGCAAGGAAGGACCACTAGTGTGGCTCCAGCTGCCCCGA +
Preference number: 5 (lower is better)
Translates to: GCIPTAVILRPGDSC*PCKEGPLVWLQLPR
Trigger: TCGGGGCAGCTGGAGCCACACTAGTGGTCCTTCCTTGCAGGGGCAGCAGCTGTCTCCTGGTCTCAGAATCACAGCTGTGGGGATGCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS GCA 90 bp GGCAGGAGCCCGTGGACCATCCAGCACACTGCAGTGGAGCACCTCTaGCTCTCTGCCACTGTCCAGAGCTCATGGAAATGCCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: GRSPWTIQHTAVEHL*LSATVQSSWKCLFL
Trigger: CAAGAAGAGGCATTTCCATGAGCTCTGGACAGTGGCAGAGAGGCAGAGGTGCTCCACTGCAGTGTGCTGGATGGTCCACGGGCTCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS GCA 90 bp TGCCTGTTCCCTGTGGTGGTGTGGTGTGGTCATGAAGGTTCCGCCTaGCTGGGGTCAGGTGCAGGTTCCACTGTTCTCTGTGTTGACCTC +
Preference number: 5 (lower is better)
Translates to: CLFPVVVWCGHEGSA*LGSGAGSTVLCVDL
Trigger: GAGGTCAACACAGAGAACAGTGGAACCTGCACCTGACCCCAGGCAGGCGGAACCTTCATGACCACACCACACCACCACAGGGAACAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS GCA 90 bp TGCAAATCCTCACATTGGCAGGAGCCCGTGGACCATCCAGCACACTaGAGTGGAGCACCTCTGCCTCTCTGCCACTGTCCAGAGCTCATG +
Preference number: 5 (lower is better)
Translates to: CKSSHWQEPVDHPAH*SGAPLPLCHCPELM
Trigger: CATGAGCTCTGGACAGTGGCAGAGAGGCAGAGGTGCTCCACTGCAGTGTGCTGGATGGTCCACGGGCTCCTGCCAATGTGAGGATTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS TCA 90 bp CCATTGTTTTCCCTGCCTGTTCCCTGTGGTGGTGTGGTGTGGTCATaGAGGTTCCGCCTGCCTGGGGTCAGGTGCAGGTTCCACTGTTCT +
Preference number: 5 (lower is better)
Translates to: PLFSLPVPCGGVVWS*RFRLPGVRCRFHCS
Trigger: AGAACAGTGGAACCTGCACCTGACCCCAGGCAGGCGGAACCTTCATGACCACACCACACCACCACAGGGAACAGGCAGGGAAAACAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS CCA 90 bp TGTTCCCTGTGGTGGTGTGGTGTGGTCATGAAGGTTCCGCCTGCCTaGGGTCAGGTGCAGGTTCCACTGTTCTCTGTGTTGACCTCGATA +
Preference number: 5 (lower is better)
Translates to: CSLWWCGVVMKVPPA*GQVQVPLFSVLTSI
Trigger: TATCGAGGTCAACACAGAGAACAGTGGAACCTGCACCTGACCCCAGGCAGGCGGAACCTTCATGACCACACCACACCACCACAGGGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS CCA 90 bp TGTGGCTCCAGCTGCCCCGAATTCAGGAAGCTGGTGACAAGACCATaGATATACCAGTTGCTGCAAATCCTCACATTGGCAGGAGCCCGT +
Preference number: 5 (lower is better)
Translates to: CGSSCPEFRKLVTRP*IYQLLQILTLAGAR
Trigger: ACGGGCTCCTGCCAATGTGAGGATTTGCAGCAACTGGTATATCCATGGTCTTGTCACCAGCTTCCTGAATTCGGGGCAGCTGGAGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS GCA 90 bp GTGGAGCACCTCTGCCTCTCTGCCACTGTCCAGAGCTCATGGAAATaGCTCTTCTTGGCAAAACTGAAACTGCAGCCAGATCCAAACAGC +
Preference number: 5 (lower is better)
Translates to: VEHLCLSATVQSSWK*LFLAKLKLQPDPNS
Trigger: GCTGTTTGGATCTGGCTGCAGTTTCAGTTTTGCCAAGAAGAGGCATTTCCATGAGCTCTGGACAGTGGCAGAGAGGCAGAGGTGCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS TCA 90 bp AGGACCACTAGTGTGGCTCCAGCTGCCCCGAATTCAGGAAGCTGGTaGCAAGACCATGGATATACCAGTTGCTGCAAATCCTCACATTGG +
Preference number: 5 (lower is better)
Translates to: RTTSVAPAAPNSGSW*QDHGYTSCCKSSHW
Trigger: CCAATGTGAGGATTTGCAGCAACTGGTATATCCATGGTCTTGTCACCAGCTTCCTGAATTCGGGGCAGCTGGAGCCACACTAGTGGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS TCA 72 bp TCCCTGCCTGTTCCCTGTGGTGGTGTGGTGTGGTCATaGAGGTTCCGCCTGCCTGGGGTCAGGTGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: SLPVPCGGVVWS*RFRLPGVRCRF
Trigger: GAACCTGCACCTGACCCCAGGCAGGCGGAACCTTCATGACCACACCACACCACCACAGGGAACAGGCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS GCA 72 bp GCTGTGATTCTGAGACCAGGAGACAGCTGCTGCCCCTaGAAGGAAGGACCACTAGTGTGGCTCCAGCTGCCC +
Preference number: 6 (lower is better)
Translates to: AVILRPGDSCCP*KEGPLVWLQLP
Trigger: GGGCAGCTGGAGCCACACTAGTGGTCCTTCCTTGCAGGGGCAGCAGCTGTCTCCTGGTCTCAGAATCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS CCA 72 bp GACAGCTGCTGCCCCTGCAAGGAAGGACCACTAGTGTaGCTCCAGCTGCCCCGAATTCAGGAAGCTGGTGAC +
Preference number: 6 (lower is better)
Translates to: DSCCPCKEGPLV*LQLPRIQEAGD
Trigger: GTCACCAGCTTCCTGAATTCGGGGCAGCTGGAGCCACACTAGTGGTCCTTCCTTGCAGGGGCAGCAGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS GCA 72 bp CCTGTGGTGGTGTGGTGTGGTCATGAAGGTTCCGCCTaGCTGGGGTCAGGTGCAGGTTCCACTGTTCTCTGT +
Preference number: 6 (lower is better)
Translates to: PVVVWCGHEGSA*LGSGAGSTVLC
Trigger: ACAGAGAACAGTGGAACCTGCACCTGACCCCAGGCAGGCGGAACCTTCATGACCACACCACACCACCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS GCA 72 bp CCGTGGACCATCCAGCACACTGCAGTGGAGCACCTCTaGCTCTCTGCCACTGTCCAGAGCTCATGGAAATGC +
Preference number: 6 (lower is better)
Translates to: PWTIQHTAVEHL*LSATVQSSWKC
Trigger: GCATTTCCATGAGCTCTGGACAGTGGCAGAGAGGCAGAGGTGCTCCACTGCAGTGTGCTGGATGGTCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS CCA 72 bp ACCCATTGTTTTCCCTGCCTGTTCCCTGTGGTGGTGTaGTGTGGTCATGAAGGTTCCGCCTGCCTGGGGTCA +
Preference number: 6 (lower is better)
Translates to: THCFPCLFPVVV*CGHEGSACLGS
Trigger: TGACCCCAGGCAGGCGGAACCTTCATGACCACACCACACCACCACAGGGAACAGGCAGGGAAAACAATGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS CCA 72 bp CCTGCTAGACCCATTGTTTTCCCTGCCTGTTCCCTGTaGTGGTGTGGTGTGGTCATGAAGGTTCCGCCTGCC +
Preference number: 6 (lower is better)
Translates to: PARPIVFPACSL*WCGVVMKVPPA
Trigger: GGCAGGCGGAACCTTCATGACCACACCACACCACCACAGGGAACAGGCAGGGAAAACAATGGGTCTAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS CAA 90 bp CTGGTGACAAGACCATGGATATACCAGTTGCTGCAAATCCTCACATaGGCAGGAGCCCGTGGACCATCCAGCACACTGCAGTGGAGCACC +
Preference number: 6 (lower is better)
Translates to: LVTRPWIYQLLQILT*AGARGPSSTLQWST
Trigger: GGTGCTCCACTGCAGTGTGCTGGATGGTCCACGGGCTCCTGCCAATGTGAGGATTTGCAGCAACTGGTATATCCATGGTCTTGTCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS GCA 72 bp CATCCAGCACACTGCAGTGGAGCACCTCTGCCTCTCTaGCACTGTCCAGAGCTCATGGAAATGCCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: HPAHCSGAPLPL*HCPELMEMPLL
Trigger: AAGAAGAGGCATTTCCATGAGCTCTGGACAGTGGCAGAGAGGCAGAGGTGCTCCACTGCAGTGTGCTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS CAA 90 bp TGCCCCGAATTCAGGAAGCTGGTGACAAGACCATGGATATACCAGTaGCTGCAAATCCTCACATTGGCAGGAGCCCGTGGACCATCCAGC +
Preference number: 6 (lower is better)
Translates to: CPEFRKLVTRPWIYQ*LQILTLAGARGPSS
Trigger: GCTGGATGGTCCACGGGCTCCTGCCAATGTGAGGATTTGCAGCAACTGGTATATCCATGGTCTTGTCACCAGCTTCCTGAATTCGGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS CAA 72 bp AGACCATGGATATACCAGTTGCTGCAAATCCTCACATaGGCAGGAGCCCGTGGACCATCCAGCACACTGCAG +
Preference number: 6 (lower is better)
Translates to: RPWIYQLLQILT*AGARGPSSTLQ
Trigger: CTGCAGTGTGCTGGATGGTCCACGGGCTCCTGCCAATGTGAGGATTTGCAGCAACTGGTATATCCATGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS TCA 72 bp AGTGTGGCTCCAGCTGCCCCGAATTCAGGAAGCTGGTaGCAAGACCATGGATATACCAGTTGCTGCAAATCC +
Preference number: 6 (lower is better)
Translates to: SVAPAAPNSGSW*QDHGYTSCCKS
Trigger: GGATTTGCAGCAACTGGTATATCCATGGTCTTGTCACCAGCTTCCTGAATTCGGGGCAGCTGGAGCCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS GCA 72 bp CTCTGCCTCTCTGCCACTGTCCAGAGCTCATGGAAATaGCTCTTCTTGGCAAAACTGAAACTGCAGCCAGAT +
Preference number: 6 (lower is better)
Translates to: LCLSATVQSSWK*LFLAKLKLQPD
Trigger: ATCTGGCTGCAGTTTCAGTTTTGCCAAGAAGAGGCATTTCCATGAGCTCTGGACAGTGGCAGAGAGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS CAA 72 bp ACTCTGGGAAATGTCACTTTTGTCCTGCTAGACCCATaGTTTTCCCTGCCTGTTCCCTGTGGTGGTGTGGTG +
Preference number: 6 (lower is better)
Translates to: TLGNVTFVLLDP*FSLPVPCGGVV
Trigger: CACCACACCACCACAGGGAACAGGCAGGGAAAACAATGGGTCTAGCAGGACAAAAGTGACATTTCCCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS CAA 72 bp TTCAGGAAGCTGGTGACAAGACCATGGATATACCAGTaGCTGCAAATCCTCACATTGGCAGGAGCCCGTGGA +
Preference number: 6 (lower is better)
Translates to: FRKLVTRPWIYQ*LQILTLAGARG
Trigger: TCCACGGGCTCCTGCCAATGTGAGGATTTGCAGCAACTGGTATATCCATGGTCTTGTCACCAGCTTCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS CAA 90 bp CTCTGCCTCTCTGCCACTGTCCAGAGCTCATGGAAATGCCTCTTCTaGGCAAAACTGAAACTGCAGCCAGATCCAAACAGCAAGAAACTC +
Preference number: 6 (lower is better)
Translates to: LCLSATVQSSWKCLF*AKLKLQPDPNSKKL
Trigger: GAGTTTCTTGCTGTTTGGATCTGGCTGCAGTTTCAGTTTTGCCAAGAAGAGGCATTTCCATGAGCTCTGGACAGTGGCAGAGAGGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS CCA 72 bp AGCTGCCCCGAATTCAGGAAGCTGGTGACAAGACCATaGATATACCAGTTGCTGCAAATCCTCACATTGGCA +
Preference number: 6 (lower is better)
Translates to: SCPEFRKLVTRP*IYQLLQILTLA
Trigger: TGCCAATGTGAGGATTTGCAGCAACTGGTATATCCATGGTCTTGTCACCAGCTTCCTGAATTCGGGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS CAA 72 bp GCCTGGGGTCAGGTGCAGGTTCCACTGTTCTCTGTGTaGACCTCGATAATCTTGTGTGACTTTTCTGTGTCT +
Preference number: 6 (lower is better)
Translates to: AWGQVQVPLFSV*TSIILCDFSVS
Trigger: AGACACAGAAAAGTCACACAAGATTATCGAGGTCAACACAGAGAACAGTGGAACCTGCACCTGACCCCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373171.2
CDS CAA 72 bp TCTGCCACTGTCCAGAGCTCATGGAAATGCCTCTTCTaGGCAAAACTGAAACTGCAGCCAGATCCAAACAGC +
Preference number: 6 (lower is better)
Translates to: SATVQSSWKCLF*AKLKLQPDPNS
Trigger: GCTGTTTGGATCTGGCTGCAGTTTCAGTTTTGCCAAGAAGAGGCATTTCCATGAGCTCTGGACAGTGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373171.2