Pregenerated sensors for LINC00944 (Homo sapiens)
Ensembl gene IDs: ENSG00000256128Ensembl transcript IDs: ENST00000536517.1, ENST00000540684.5, ENST00000542248.5, ENST00000545508.2, ENST00000546117.2, ENST00000654541.1, ENST00000655370.1, ENST00000656536.1, ENST00000656909.1, ENST00000659004.1, ENST00000659581.1, ENST00000660736.1, ENST00000661743.1, ENST00000662540.1, ENST00000664274.1, ENST00000665130.1, ENST00000665131.1, ENST00000665986.1, ENST00000666903.1, ENST00000670633.1, ENST00000671627.1
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCACATGTTTATTCTGCGGCTGCAGGTGCAGTGGGCATGGCAGCCTaGTGTGTTCCTCTCCAGGTCCCAGGGAACAGCTCTTCAATGGGG | + |
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Preference number: 5 (lower is better) Translates to: PHVYSAAAGAVGMAA*CVPLQVPGNSSSMG Trigger: CCCCATTGAAGAGCTGTTCCCTGGGACCTGGAGAGGAACACAGCAGGCTGCCATGCCCACTGCACCTGCAGCCGCAGAATAAACATGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542248.5 |
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| CDS GCA 90 bp | AAACCTGCCGAGGTGGAGGACCAGCTTAATGCCAGTGCCCACCACTaGTTACAGGCTGGGATACTTGTAGGTATGGCAGGGAGGGGTCTG | + |
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Preference number: 5 (lower is better) Translates to: KPAEVEDQLNASAHH*LQAGILVGMAGRGL Trigger: CAGACCCCTCCCTGCCATACCTACAAGTATCCCAGCCTGTAAGCAGTGGTGGGCACTGGCATTAAGCTGGTCCTCCACCTCGGCAGGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS GCA 90 bp | GTTAGTGGTGAAGATGGAACAGATGTGTCCAACCCGGGGGACTCCTaGCCTCAGGGACTGAGCAGCTGCAAACCTCTCTCTCATCTGATT | + |
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Preference number: 5 (lower is better) Translates to: VSGEDGTDVSNPGDS*PQGLSSCKPLSHLI Trigger: AATCAGATGAGAGAGAGGTTTGCAGCTGCTCAGTCCCTGAGGGCAGGAGTCCCCCGGGTTGGACACATCTGTTCCATCTTCACCACTAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000659581.1 ENST00000665130.1 ENST00000665986.1 |
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| CDS TCA 90 bp | GCTCAGCCAGGTGTTGATGGAGGACAGAGGATTAAGAGGAAGCCTTaGGTTACAGGGACCGAAGCAGCTGCTGTGTGGATTCAGATCTGG | + |
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Preference number: 5 (lower is better) Translates to: AQPGVDGGQRIKRKP*VTGTEAAAVWIQIW Trigger: CCAGATCTGAATCCACACAGCAGCTGCTTCGGTCCCTGTAACTCAAGGCTTCCTCTTAATCCTCTGTCCTCCATCAACACCTGGCTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000540684.5 ENST00000659581.1 ENST00000661743.1 ENST00000665130.1 ENST00000671627.1 |
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| CDS GCA 90 bp | AATGGACACAGGAAAGGTCAGCTGAGGTTATGGCAGGTATCCAGGTaGATGAAGATGGTGGCTTGGACCAGGTGGCCATGGTGGAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: NGHRKGQLRLWQVSR*MKMVAWTRWPWWRE Trigger: TTCTCTCCACCATGGCCACCTGGTCCAAGCCACCATCTTCATGCACCTGGATACCTGCCATAACCTCAGCTGACCTTTCCTGTGTCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000540684.5 ENST00000659004.1 ENST00000670633.1 |
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| CDS GCA 90 bp | TGTGTTCCTCTCCAGGTCCCAGGGAACAGCTCTTCAATGGGGTTATaGTGGGTACATTTCCACATGGCTGGGGAAGCCTCACAATCATGG | + |
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Preference number: 5 (lower is better) Translates to: CVPLQVPGNSSSMGL*WVHFHMAGEASQSW Trigger: CCATGATTGTGAGGCTTCCCCAGCCATGTGGAAATGTACCCAGCATAACCCCATTGAAGAGCTGTTCCCTGGGACCTGGAGAGGAACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000662540.1 ENST00000665130.1 |
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| CDS GCA 90 bp | AGGGTTAAAGACACACATAGAGCGAGAGGGCGGCTCAACAGCAAATaGAGGTATTTATGTCCAGGTAAACCTGCCGAGGTGGAGGACCAG | + |
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Preference number: 5 (lower is better) Translates to: RVKDTHRARGRLNSK*RYLCPGKPAEVEDQ Trigger: CTGGTCCTCCACCTCGGCAGGTTTACCTGGACATAAATACCTGCATTTGCTGTTGAGCCGCCCTCTCGCTCTATGTGTGTCTTTAACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS TCA 90 bp | GCTCGATTAGAGAGTGTGCTGCGGCAAGATTTATTAAAGCGAAAGTaGAAGGAAAGCTTCCACGTGGGGGAAGGGGACCTGGAAGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: ARLESVLRQDLLKRK*KESFHVGEGDLEGL Trigger: CAACCCTTCCAGGTCCCCTTCCCCCACGTGGAAGCTTTCCTTTCACTTTCGCTTTAATAAATCTTGCCGCAGCACACTCTCTAATCGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000540684.5 ENST00000542248.5 ENST00000664274.1 ENST00000671627.1 |
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| CDS TCA 90 bp | GCAGGCAGGTTCTCATGGCCCGAACCCTCGTGGAATGTTTCACTTTaGCCAAGGTCTGCATATTGGCAGGGAGCTTACAAAATGGTGCAT | + |
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Preference number: 5 (lower is better) Translates to: AGRFSWPEPSWNVSL*PRSAYWQGAYKMVH Trigger: ATGCACCATTTTGTAAGCTCCCTGCCAATATGCAGACCTTGGTCAAAGTGAAACATTCCACGAGGGTTCGGGCCATGAGAACCTGCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS TCA 90 bp | AGATTCCTGAAGGCCCTGGTCCTAGGTCATAGTTGTTCCTGTGGATaGAGCCCCTTAGTCCTCAATCTTCCTCTGCATCAGGCTGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: RFLKALVLGHSCSCG*SPLVLNLPLHQAVF Trigger: AAAGACAGCCTGATGCAGAGGAAGATTGAGGACTAAGGGGCTTCATCCACAGGAACAACTATGACCTAGGACCAGGGCCTTCAGGAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665986.1 |
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| CDS TCA 90 bp | GTGCATTTTGGATTAACAGGTCTCAGTCTTGGGCTCCTCGTTGTCTaGCAGATCCTAAATCTTGGCCCCTGCTGTTCCAGGTTCTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: VHFGLTGLSLGLLVV*QILNLGPCCSRFSS Trigger: AGAAGAGAACCTGGAACAGCAGGGGCCAAGATTTAGGATCTGTCAGACAACGAGGAGCCCAAGACTGAGACCTGTTAATCCAAAATGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS TCA 90 bp | TCCTACAAGGGTCATGGGAGCCCCGAGAGTTTGTGGACCTCACTTTaGGAATCACTGTTCTACATAATTCCTGTGGCTGTTTTTAACACC | + |
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Preference number: 5 (lower is better) Translates to: SYKGHGSPESLWTSL*ESLFYIIPVAVFNT Trigger: GGTGTTAAAAACAGCCACAGGAATTATGTAGAACAGTGATTCTCAAAGTGAGGTCCACAAACTCTCGGGGCTCCCATGACCCTTGTAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS GCA 90 bp | CTCATGGCCCGAACCCTCGTGGAATGTTTCACTTTGACCAAGGTCTaGATATTGGCAGGGAGCTTACAAAATGGTGCATTTTGGATTAAC | + |
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Preference number: 5 (lower is better) Translates to: LMARTLVECFTLTKV*ILAGSLQNGAFWIN Trigger: GTTAATCCAAAATGCACCATTTTGTAAGCTCCCTGCCAATATGCAGACCTTGGTCAAAGTGAAACATTCCACGAGGGTTCGGGCCATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS TCA 90 bp | AAATGTTGCACCAGGGTGTACAGATTATGGCTCTTTGATGGTTCCTaGGAGGGAAGTAAAGCTTTAACTCAGGGTTTCCTAGCGAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: KCCTRVYRLWLFDGS*EGSKALTQGFLARR Trigger: CCTTCTCGCTAGGAAACCCTGAGTTAAAGCTTTACTTCCCTCTCAGGAACCATCAAAGAGCCATAATCTGTACACCCTGGTGCAACATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656536.1 |
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| CDS GCA 90 bp | TTCCCGCCATTGAGATCAAAGTCAGATGAAAATATGCCTTCAATCTaGAGCTCTGGAGAGTCATTCCATTCCACAGTCTCTCTCTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: FPPLRSKSDENMPSI*SSGESFHSTVSLSS Trigger: ACTGGAGAGAGAGACTGTGGAATGGAATGACTCTCCAGAGCTGCAGATTGAAGGCATATTTTCATCTGACTTTGATCTCAATGGCGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000540684.5 ENST00000666903.1 ENST00000671627.1 |
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| CDS GCA 90 bp | TTCCCGCCATTGAGATCAAAGTCAGATGAAAATATGCCTTCAATCTaGAGCTCTGGAGAGTCATTCCATTCCACAGTCTCTCTCTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: FPPLRSKSDENMPSI*SSGESFHSTVSLCC Trigger: ACAGCAGAGAGAGACTGTGGAATGGAATGACTCTCCAGAGCTGCAGATTGAAGGCATATTTTCATCTGACTTTGATCTCAATGGCGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665131.1 |
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| CDS GCA 90 bp | TTCCCGCCATTGAGATCAAAGTCAGATGAAAATATGCCTTCAATCTaGAGCTCTGGAGAGTCATTCCATTCCACAGTCTCTCTAAAACTC | + |
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Preference number: 5 (lower is better) Translates to: FPPLRSKSDENMPSI*SSGESFHSTVSLKL Trigger: GAGTTTTAGAGAGACTGTGGAATGGAATGACTCTCCAGAGCTGCAGATTGAAGGCATATTTTCATCTGACTTTGATCTCAATGGCGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546117.2 |
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| CDS GCA 90 bp | TCCGTAGAGATCCAACCAATGAAGGAGACTTCGAAAACTTCACATTaGCGTGTCAATGTGAGGTTGCTGGATGGTTATGACAAGAAATCA | + |
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Preference number: 5 (lower is better) Translates to: SVEIQPMKETSKTSH*RVNVRLLDGYDKKS Trigger: TGATTTCTTGTCATAACCATCCAGCAACCTCACATTGACACGGCAATGTGAAGTTTTCGAAGTCTCCTTCATTGGTTGGATCTCTACGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000659581.1 ENST00000665130.1 ENST00000665986.1 |
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| CDS TCA 90 bp | ACTGATGCCCTTTGTAAAGCTCTCTATGGCTGTGTTCTCACTCTTTaGTCACAGGATCTGTTTATCCTTACATTGTTGAAAACCACCCCA | + |
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Preference number: 5 (lower is better) Translates to: TDALCKALYGCVLTL*SQDLFILTLLKTTP Trigger: TGGGGTGGTTTTCAACAATGTAAGGATAAACAGATCCTGTGATCAAAGAGTGAGAACACAGCCATAGAGAGCTTTACAAAGGGCATCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS TCA 90 bp | TCTTCCAGCATTTCTATCATTCTCTCTCTCTGTCTTATAGGCAAATaGGATGATGTTTCCGGGTCAATACATGACGGGATTAACTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: SSSISIILSLCLIGK*DDVSGSIHDGINCG Trigger: TCCACAGTTAATCCCGTCATGTATTGACCCGGAAACATCATCTCATTTGCCTATAAGACAGAGAGAGAGAATGATAGAAATGCTGGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661743.1 ENST00000665130.1 |
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| CDS TCA 90 bp | TCTTCCAGCATTTCTATCATTCTCTCTCTCTGTCTTATAGGCAAATaGGATGATGTTTCCGGGTCAATACATGACGGGATTAACTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: SSSISIILSLCLIGK*DDVSGSIHDGINCL Trigger: AAGACAGTTAATCCCGTCATGTATTGACCCGGAAACATCATCTCATTTGCCTATAAGACAGAGAGAGAGAATGATAGAAATGCTGGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000540684.5 ENST00000671627.1 |
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| CDS TCA 90 bp | TCTTCCAGCATTTCTATCATTCTCTCTCTCTGTCTTATAGGCAAATaGGATGATGTTTCCGGGTCAATACATGACGGGATTAAATTTCCA | + |
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Preference number: 5 (lower is better) Translates to: SSSISIILSLCLIGK*DDVSGSIHDGIKFP Trigger: TGGAAATTTAATCCCGTCATGTATTGACCCGGAAACATCATCTCATTTGCCTATAAGACAGAGAGAGAGAATGATAGAAATGCTGGAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659581.1 |
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| CDS TCA 90 bp | AAATATGCTTCCCAGACGTGGTTTCATCTTGCAATTCGATTCCGCTaGATAAATGGACTTGGTTTCATTTTGCAATTTTATTCCACTGCT | + |
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Preference number: 5 (lower is better) Translates to: KYASQTWFHLAIRFR*INGLGFILQFYSTA Trigger: AGCAGTGGAATAAAATTGCAAAATGAAACCAAGTCCATTTATTCAGCGGAATCGAATTGCAAGATGAAACCACGTCTGGGAAGCATATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000545508.2 ENST00000662540.1 |
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| CDS GCA 72 bp | GAAGATGGAACAGATGTGTCCAACCCGGGGGACTCCTaGCCTCAGGGACTGAGCAGCTGCAAACCTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: EDGTDVSNPGDS*PQGLSSCKPLS Trigger: AGAGAGAGGTTTGCAGCTGCTCAGTCCCTGAGGGCAGGAGTCCCCCGGGTTGGACACATCTGTTCCATCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000659581.1 ENST00000665130.1 ENST00000665986.1 |
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| CDS CCA 72 bp | ACAGGGACCGAAGCAGCTGCTGTGTGGATTCAGATCTaGGCGATACCGCCCCAAGGCTCGTTCTTCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: TGTEAAAVWIQI*AIPPQGSFFQH Trigger: ATGCTGGAAGAACGAGCCTTGGGGCGGTATCGCCCAGATCTGAATCCACACAGCAGCTGCTTCGGTCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000540684.5 ENST00000659581.1 ENST00000661743.1 ENST00000665130.1 ENST00000671627.1 |
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| CDS GCA 72 bp | GAGGTGGAGGACCAGCTTAATGCCAGTGCCCACCACTaGTTACAGGCTGGGATACTTGTAGGTATGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: EVEDQLNASAHH*LQAGILVGMAG Trigger: CCCTGCCATACCTACAAGTATCCCAGCCTGTAAGCAGTGGTGGGCACTGGCATTAAGCTGGTCCTCCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS CCA 72 bp | AAAGCTTCCAACTCCCAGCGGTTCCAGCAGAAGTCCTaGGGCTGGAGAGCTGTTCCTGAGTTGCCTGTGATC | + |
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Preference number: 6 (lower is better) Translates to: KASNSQRFQQKS*GWRAVPELPVI Trigger: GATCACAGGCAACTCAGGAACAGCTCTCCAGCCCCAGGACTTCTGCTGGAACCGCTGGGAGTTGGAAGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000546117.2 ENST00000654541.1 ENST00000655370.1 ENST00000656536.1 ENST00000656909.1 ENST00000660736.1 ENST00000665131.1 |
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| CDS TCA 72 bp | GTTCCAGCAGAAGTCCTGGGGCTGGAGAGCTGTTCCTaGGTTGCCTGTGATCACATACCACACCTGATGGCA | + |
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Preference number: 6 (lower is better) Translates to: VPAEVLGLESCS*VACDHIPHLMA Trigger: TGCCATCAGGTGTGGTATGTGATCACAGGCAACTCAGGAACAGCTCTCCAGCCCCAGGACTTCTGCTGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000546117.2 ENST00000654541.1 ENST00000656536.1 ENST00000656909.1 ENST00000665131.1 |
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| CDS GCA 72 bp | CTCCAGGTCCCAGGGAACAGCTCTTCAATGGGGTTATaGTGGGTACATTTCCACATGGCTGGGGAAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LQVPGNSSSMGL*WVHFHMAGEAS Trigger: TGAGGCTTCCCCAGCCATGTGGAAATGTACCCAGCATAACCCCATTGAAGAGCTGTTCCCTGGGACCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000662540.1 ENST00000665130.1 |
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| CDS CCA 72 bp | GTGTTCCTCTCCAGGTCCCAGGGAACAGCTCTTCAATaGGGTTATGCTGGGTACATTTCCACATGGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: VFLSRSQGTALQ*GYAGYISTWLG Trigger: CCCCAGCCATGTGGAAATGTACCCAGCATAACCCCATTGAAGAGCTGTTCCCTGGGACCTGGAGAGGAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662540.1 ENST00000665130.1 |
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| CDS TCA 72 bp | CAGTCTGTAGCTCTGCGTGGAGCCATGTGTAAACACTaGACTGAGACCTGCCACCTCCTACTACCTAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: QSVALRGAMCKH*TETCHLLLPKG Trigger: GCCCTTAGGTAGTAGGAGGTGGCAGGTCTCAGTTCAGTGTTTACACATGGCTCCACGCAGAGCTACAGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665986.1 |
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| CDS CCA 72 bp | CAGGTCCCAGGGAACAGCTCTTCAATGGGGTTATGCTaGGTACATTTCCACATGGCTGGGGAAGCCTCACAA | + |
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Preference number: 6 (lower is better) Translates to: QVPGNSSSMGLC*VHFHMAGEASQ Trigger: TTGTGAGGCTTCCCCAGCCATGTGGAAATGTACCCAGCATAACCCCATTGAAGAGCTGTTCCCTGGGACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000662540.1 ENST00000665130.1 |
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| CDS CCA 72 bp | TTATTCTGCGGCTGTGGCCGACAATTTCCACATGGCTaGGGAAGCCTCACAATCATGGCAGAAGGCAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LFCGCGRQFPHG*GSLTIMAEGKE Trigger: CTCCTTGCCTTCTGCCATGATTGTGAGGCTTCCCCAGCCATGTGGAAATTGTCGGCCACAGCCGCAGAATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665986.1 |
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| CDS TCA 72 bp | GGATTAACAGGTCTCAGTCTTGGGCTCCTCGTTGTCTaGCAGATCCTAAATCTTGGCCCCTGCTGTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GLTGLSLGLLVV*QILNLGPCCSR Trigger: CCTGGAACAGCAGGGGCCAAGATTTAGGATCTGTCAGACAACGAGGAGCCCAAGACTGAGACCTGTTAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS CCA 72 bp | AATGCAGGTATTTATGTCCAGGTAAACCTGCCGAGGTaGAGGACCAGCTTAATGCCAGTGCCCACCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: NAGIYVQVNLPR*RTSLMPVPTTA Trigger: AGCAGTGGTGGGCACTGGCATTAAGCTGGTCCTCCACCTCGGCAGGTTTACCTGGACATAAATACCTGCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS CCA 72 bp | GTACATTTCCACATGGCTGGGGAAGCCTCACAATCATaGCAGAAGGCAAGGAGGAGCAAGTCACGTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: VHFHMAGEASQS*QKARRSKSRLS Trigger: AGACAGACGTGACTTGCTCCTCCTTGCCTTCTGCCATGATTGTGAGGCTTCCCCAGCCATGTGGAAATGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662540.1 ENST00000665130.1 |
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| CDS CCA 72 bp | GACAATTTCCACATGGCTGGGGAAGCCTCACAATCATaGCAGAAGGCAAGGAGGAGCAAGTCACGTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: DNFHMAGEASQS*QKARRSKSRLS Trigger: AGACAGACGTGACTTGCTCCTCCTTGCCTTCTGCCATGATTGTGAGGCTTCCCCAGCCATGTGGAAATTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665986.1 |
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| CDS CCA 72 bp | GTTCATTTCCACATGGCTGGGGAAGCCTCACAATCATaGCAGAAGGCAAGGAGGAGCAAGTCACGTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: VHFHMAGEASQS*QKARRSKSRLS Trigger: AGACAGACGTGACTTGCTCCTCCTTGCCTTCTGCCATGATTGTGAGGCTTCCCCAGCCATGTGGAAATGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666903.1 |
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| CDS CAA 90 bp | GGCAGGCAGGTTCTCATGGCCCGAACCCTCGTGGAATGTTTCACTTaGACCAAGGTCTGCATATTGGCAGGGAGCTTACAAAATGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: GRQVLMARTLVECFT*TKVCILAGSLQNGA Trigger: TGCACCATTTTGTAAGCTCCCTGCCAATATGCAGACCTTGGTCAAAGTGAAACATTCCACGAGGGTTCGGGCCATGAGAACCTGCCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS CAA 90 bp | TGTTCCTTGGACTTTTTCTCAGCAGAATGTGTTAAAGTCAGGCGGTaGGGCAGGCAGGTTCTCATGGCCCGAACCCTCGTGGAATGTTTC | + |
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Preference number: 6 (lower is better) Translates to: CSLDFFSAECVKVRR*GRQVLMARTLVECF Trigger: GAAACATTCCACGAGGGTTCGGGCCATGAGAACCTGCCTGCCCAACCGCCTGACTTTAACACATTCTGCTGAGAAAAAGTCCAAGGAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS TCA 72 bp | GGTGTTGATGGAGGACAGAGGATTAAGAGGAAGCCTTaGGTTACAGGGACCGAAGCAGCTGCTGTGTGGATT | + |
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Preference number: 6 (lower is better) Translates to: GVDGGQRIKRKP*VTGTEAAAVWI Trigger: AATCCACACAGCAGCTGCTTCGGTCCCTGTAACTCAAGGCTTCCTCTTAATCCTCTGTCCTCCATCAACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000540684.5 ENST00000659581.1 ENST00000661743.1 ENST00000665130.1 ENST00000671627.1 |
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| CDS TCA 72 bp | GCTGCCAGGGAAGATGTTGAGAAGACGTTCCCACAATaGGGCAGTTGGGGCCTTGTTCCCACAGAATGTAAT | + |
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Preference number: 6 (lower is better) Translates to: AAREDVEKTFPQ*GSWGLVPTECN Trigger: ATTACATTCTGTGGGAACAAGGCCCCAACTGCCTCATTGTGGGAACGTCTTCTCAACATCTTCCCTGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS GCA 72 bp | CCTGGAAGGGTTGCTGTTTCTGGCTTGGGTATCTTATaGTTACATCCCCTTATGACCCCTGCCCTCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: PGRVAVSGLGIL*LHPLMTPALFL Trigger: AAGGAAGAGGGCAGGGGTCATAAGGGGATGTAAGCATAAGATACCCAAGCCAGAAACAGCAACCCTTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000540684.5 ENST00000664274.1 ENST00000671627.1 |
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| CDS CCA 72 bp | CAACATCTTCAGATACCTAGAAGGTTTGCCCCTCAGTaGGAAGAAAGCTTCCAACTCCCAGCGGTTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QHLQIPRRFAPQ*EESFQLPAVPA Trigger: TGCTGGAACCGCTGGGAGTTGGAAGCTTTCTTCCCACTGAGGGGCAAACCTTCTAGGTATCTGAAGATGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000546117.2 ENST00000654541.1 ENST00000655370.1 ENST00000656536.1 ENST00000656909.1 ENST00000660736.1 ENST00000665131.1 |
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| CDS CCA 72 bp | GATATTTTGGCTTGTGTGGACCTCCTACAAGGGTCATaGGAGCCCCGAGAGTTTGTGGACCTCACTTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: DILACVDLLQGS*EPREFVDLTLR Trigger: TCTCAAAGTGAGGTCCACAAACTCTCGGGGCTCCCATGACCCTTGTAGGAGGTCCACACAAGCCAAAATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS CCA 72 bp | TTCAATGGGGTTATGCTGGGTACATTTCCACATGGCTaGGGAAGCCTCACAATCATGGCAGAAGGCAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FNGVMLGTFPHG*GSLTIMAEGKE Trigger: CTCCTTGCCTTCTGCCATGATTGTGAGGCTTCCCCAGCCATGTGGAAATGTACCCAGCATAACCCCATTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662540.1 ENST00000665130.1 |
||
| CDS CCA 72 bp | GCTCTTCAATGGGGTTATGCTGGGTACATTTCCACATaGCTGGGGAAGCCTCACAATCATGGCAGAAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: ALQWGYAGYIST*LGKPHNHGRRQ Trigger: TTGCCTTCTGCCATGATTGTGAGGCTTCCCCAGCCATGTGGAAATGTACCCAGCATAACCCCATTGAAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000662540.1 ENST00000665130.1 |
||
| CDS CCA 72 bp | ATGTTTATTCTGCGGCTGTGGCCGACAATTTCCACATaGCTGGGGAAGCCTCACAATCATGGCAGAAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: MFILRLWPTIST*LGKPHNHGRRQ Trigger: TTGCCTTCTGCCATGATTGTGAGGCTTCCCCAGCCATGTGGAAATTGTCGGCCACAGCCGCAGAATAAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665986.1 |
||
| CDS CCA 72 bp | ATCAATGACCTTCTCCACATGTTTATTCTGCGGCTGTaGCCGACAATTTCCACATGGCTGGGGAAGCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: INDLLHMFILRL*PTISTWLGKPH Trigger: GTGAGGCTTCCCCAGCCATGTGGAAATTGTCGGCCACAGCCGCAGAATAAACATGTGGAGAAGGTCATTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665986.1 |
||
| CDS CCA 72 bp | CTGGTCCTAGGTCATAGTTGTTCATTTCCACATGGCTaGGGAAGCCTCACAATCATGGCAGAAGGCAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LVLGHSCSFPHG*GSLTIMAEGKE Trigger: CTCCTTGCCTTCTGCCATGATTGTGAGGCTTCCCCAGCCATGTGGAAATGAACAACTATGACCTAGGACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666903.1 |
||
| CDS CAA 90 bp | CTGTTCCAGGAAATGGTCTTCAACATCTTCAGATACCTAGAAGGTTaGCCCCTCAGTGGGAAGAAAGCTTCCAACTCCCAGCGGTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LFQEMVFNIFRYLEG*PLSGKKASNSQRFQ Trigger: CTGGAACCGCTGGGAGTTGGAAGCTTTCTTCCCACTGAGGGGCAAACCTTCTAGGTATCTGAAGATGTTGAAGACCATTTCCTGGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000546117.2 ENST00000654541.1 ENST00000655370.1 ENST00000656536.1 ENST00000656909.1 ENST00000660736.1 ENST00000665131.1 |
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| CDS CCA 72 bp | AACAAGAATGGACACAGGAAAGGTCAGCTGAGGTTATaGCAGGTATCCAGGTGCATGAAGATGGTGGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: NKNGHRKGQLRL*QVSRCMKMVAW Trigger: CCAAGCCACCATCTTCATGCACCTGGATACCTGCCATAACCTCAGCTGACCTTTCCTGTGTCCATTCTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000540684.5 ENST00000659004.1 ENST00000670633.1 |
||
| CDS CCA 72 bp | TTAAATTTCCACATGGCTGGGGAAGCCTCACAATCATaGCAGAAGGCAAGGAGGAGCAAGTCACGTCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LNFHMAGEASQS*QKARRSKSRLS Trigger: AGACAGACGTGACTTGCTCCTCCTTGCCTTCTGCCATGATTGTGAGGCTTCCCCAGCCATGTGGAAATTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659581.1 |
||
| CDS CCA 72 bp | GGGTCAATACATGACGGGATTAAATTTCCACATGGCTaGGGAAGCCTCACAATCATGGCAGAAGGCAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GSIHDGIKFPHG*GSLTIMAEGKE Trigger: CTCCTTGCCTTCTGCCATGATTGTGAGGCTTCCCCAGCCATGTGGAAATTTAATCCCGTCATGTATTGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659581.1 |
||
| CDS CAA 72 bp | GTTCTCATGGCCCGAACCCTCGTGGAATGTTTCACTTaGACCAAGGTCTGCATATTGGCAGGGAGCTTACAA | + |
|
Preference number: 6 (lower is better) Translates to: VLMARTLVECFT*TKVCILAGSLQ Trigger: TTGTAAGCTCCCTGCCAATATGCAGACCTTGGTCAAAGTGAAACATTCCACGAGGGTTCGGGCCATGAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS CAA 72 bp | GGGTCATGGGAGCCCCGAGAGTTTGTGGACCTCACTTaGAGAATCACTGTTCTACATAATTCCTGTGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GSWEPREFVDLT*RITVLHNSCGC Trigger: ACAGCCACAGGAATTATGTAGAACAGTGATTCTCAAAGTGAGGTCCACAAACTCTCGGGGCTCCCATGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS TCA 72 bp | TTCTCATGGCCCGAACCCTCGTGGAATGTTTCACTTTaGCCAAGGTCTGCATATTGGCAGGGAGCTTACAAA | + |
|
Preference number: 6 (lower is better) Translates to: FSWPEPSWNVSL*PRSAYWQGAYK Trigger: TTTGTAAGCTCCCTGCCAATATGCAGACCTTGGTCAAAGTGAAACATTCCACGAGGGTTCGGGCCATGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS TCA 72 bp | GGTCATGGGAGCCCCGAGAGTTTGTGGACCTCACTTTaGGAATCACTGTTCTACATAATTCCTGTGGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GHGSPESLWTSL*ESLFYIIPVAV Trigger: AACAGCCACAGGAATTATGTAGAACAGTGATTCTCAAAGTGAGGTCCACAAACTCTCGGGGCTCCCATGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS CCA 72 bp | CACCTTAGTATCCATATAGAGATATTTTGGCTTGTGTaGACCTCCTACAAGGGTCATGGGAGCCCCGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: HLSIHIEIFWLV*TSYKGHGSPES Trigger: ACTCTCGGGGCTCCCATGACCCTTGTAGGAGGTCCACACAAGCCAAAATATCTCTATATGGATACTAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS CAA 90 bp | GCCCGAACCCTCGTGGAATGTTTCACTTTGACCAAGGTCTGCATATaGGCAGGGAGCTTACAAAATGGTGCATTTTGGATTAACAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ARTLVECFTLTKVCI*AGSLQNGAFWINRS Trigger: AGACCTGTTAATCCAAAATGCACCATTTTGTAAGCTCCCTGCCAATATGCAGACCTTGGTCAAAGTGAAACATTCCACGAGGGTTCGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS TCA 72 bp | CAGAAGGCAAGGAGGAGCAAGTCACGTCTGTCTTCCTaGTGTGCGTCTAGTCTAGGCTGTTTTTCTTGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: QKARRSKSRLSS*CASSLGCFSCY Trigger: ATAACAAGAAAAACAGCCTAGACTAGACGCACATCAGGAAGACAGACGTGACTTGCTCCTCCTTGCCTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000659581.1 ENST00000662540.1 ENST00000665130.1 ENST00000665986.1 ENST00000666903.1 |
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| CDS GCA 72 bp | GCATGCAGAGACCTGGTCCTAAATCTGTGTGACTTTTaGGAAATCCTTTTGCCTCACAGAGCTCTAGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ACRDLVLNLCDF*EILLPHRALGS Trigger: AGAACCTAGAGCTCTGTGAGGCAAAAGGATTTCGCAAAAGTCACACAGATTTAGGACCAGGTCTCTGCATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000659581.1 ENST00000665130.1 ENST00000665986.1 |
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| CDS GCA 72 bp | TGCGGTTGCAGAGAGTCAAGGGATTGGATTGTGGATTaGATTGGTGGTTTTCCTCAGTTTCCTCATCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: CGCRESRDWIVD*IGGFPQFPHLL Trigger: GAGAAGATGAGGAAACTGAGGAAAACCACCAATGCAATCCACAATCCAATCCCTTGACTCTCTGCAACCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665986.1 |
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| CDS CCA 72 bp | TTAATAGACTCATTCTGCTGCTATGAGCGAGGAGACTaGGCCCAAAGGAACAAGAATGGACACAGGAAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LIDSFCCYERGD*AQRNKNGHRKG Trigger: ACCTTTCCTGTGTCCATTCTTGTTCCTTTGGGCCCAGTCTCCTCGCTCATAGCAGCAGAATGAGTCTATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000540684.5 ENST00000659004.1 ENST00000670633.1 |
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| CDS CAA 72 bp | GAAATGGTCTTCAACATCTTCAGATACCTAGAAGGTTaGCCCCTCAGTGGGAAGAAAGCTTCCAACTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EMVFNIFRYLEG*PLSGKKASNSQ Trigger: CTGGGAGTTGGAAGCTTTCTTCCCACTGAGGGGCAAACCTTCTAGGTATCTGAAGATGTTGAAGACCATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000546117.2 ENST00000654541.1 ENST00000655370.1 ENST00000656536.1 ENST00000656909.1 ENST00000660736.1 ENST00000665131.1 ENST00000670633.1 |
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| CDS CAA 72 bp | GTGCGGTTGCAGAGAGTCAAGGGATTGGATTGTGGATaGCATTGGTGGTTTTCCTCAGTTTCCTCATCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VRLQRVKGLDCG*HWWFSSVSSSS Trigger: AGAAGATGAGGAAACTGAGGAAAACCACCAATGCAATCCACAATCCAATCCCTTGACTCTCTGCAACCGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665986.1 |
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| CDS CAA 90 bp | TCCCTAGCTCGGAGCCCTTTTCTGAGATTCAGATCCATGTGTAGTTaGATCTGGTGGGCACTGGTACTTTTGTATTCCACAGGTATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLARSPFLRFRSMCS*IWWALVLLYSTGIF Trigger: AAAGATACCTGTGGAATACAAAAGTACCAGTGCCCACCAGATCAAACTACACATGGATCTGAATCTCAGAAAAGGGCTCCGAGCTAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000660736.1 |
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| CDS GCA 72 bp | CAATCTTCCTCTGCATCAGGCTGTCTTTATCTTGTCTaGAGTGCTTCAGTCAAGGTGATCAATGACCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: QSSSASGCLYLV*SASVKVINDLL Trigger: GAGAAGGTCATTGATCACCTTGACTGAAGCACTGCAGACAAGATAAAGACAGCCTGATGCAGAGGAAGATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000536517.1 ENST00000542248.5 ENST00000545508.2 ENST00000661743.1 ENST00000662540.1 ENST00000665130.1 ENST00000665986.1 |
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| CDS GCA 72 bp | CGAACCCTCGTGGAATGTTTCACTTTGACCAAGGTCTaGATATTGGCAGGGAGCTTACAAAATGGTGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: RTLVECFTLTKV*ILAGSLQNGAF Trigger: AAATGCACCATTTTGTAAGCTCCCTGCCAATATGCAGACCTTGGTCAAAGTGAAACATTCCACGAGGGTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS GCA 72 bp | TTTCCTCATCTTCTCCACAAGTTTCTACATATCGAATaGAGAGCAGCCCTTCTTCAAAGGACCTCCTACGGA | + |
|
Preference number: 6 (lower is better) Translates to: FPHLLHKFLHIE*RAALLQRTSYG Trigger: TCCGTAGGAGGTCCTTTGAAGAAGGGCTGCTCTGCATTCGATATGTAGAAACTTGTGGAGAAGATGAGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665986.1 |
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| CDS CAA 72 bp | TTTGTTTGTGGCTTCCATTCCTGGAAGTCCCATGAGTaGTTAGTGGTGAAGATGGAACAGATGTGTCCAACC | + |
|
Preference number: 6 (lower is better) Translates to: FVCGFHSWKSHE*LVVKMEQMCPT Trigger: GGTTGGACACATCTGTTCCATCTTCACCACTAACAACTCATGGGACTTCCAGGAATGGAAGCCACAAACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659581.1 ENST00000665130.1 ENST00000665986.1 |
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| CDS CAA 72 bp | GTTGCAGAGAGTCAAGGGATTGGATTGTGGATTGCATaGGTGGTTTTCCTCAGTTTCCTCATCTTCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: VAESQGIGLWIA*VVFLSFLIFST Trigger: TGTGGAGAAGATGAGGAAACTGAGGAAAACCACCAATGCAATCCACAATCCAATCCCTTGACTCTCTGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665986.1 |
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| CDS CAA 90 bp | TTTTGTGCGGTTGCAGAGAGTCAAGGGATTGGATTGTGGATTGCATaGGTGGTTTTCCTCAGTTTCCTCATCTTCTCCACAAGTTTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: FCAVAESQGIGLWIA*VVFLSFLIFSTSFY Trigger: GTAGAAACTTGTGGAGAAGATGAGGAAACTGAGGAAAACCACCAATGCAATCCACAATCCAATCCCTTGACTCTCTGCAACCGCACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665986.1 |
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| CDS TCA 72 bp | ACCAGGGTGTACAGATTATGGCTCTTTGATGGTTCCTaGGAGGGAAGTAAAGCTTTAACTCAGGGTTTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: TRVYRLWLFDGS*EGSKALTQGFL Trigger: TAGGAAACCCTGAGTTAAAGCTTTACTTCCCTCTCAGGAACCATCAAAGAGCCATAATCTGTACACCCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656536.1 |
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| CDS GCA 72 bp | ATCCAACCAATGAAGGAGACTTCGAAAACTTCACATTaGCGTGTCAATGTGAGGTTGCTGGATGGTTATGAC | + |
|
Preference number: 6 (lower is better) Translates to: IQPMKETSKTSH*RVNVRLLDGYD Trigger: GTCATAACCATCCAGCAACCTCACATTGACACGGCAATGTGAAGTTTTCGAAGTCTCCTTCATTGGTTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000659581.1 ENST00000665130.1 ENST00000665986.1 |
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| CDS CAA 72 bp | TCCAGCTATAAAGGGGCCATGAAGGTGTTCCCGCCATaGAGATCAAAGTCAGATGAAAATATGCCTTCAATC | + |
|
Preference number: 6 (lower is better) Translates to: SSYKGAMKVFPP*RSKSDENMPSI Trigger: GATTGAAGGCATATTTTCATCTGACTTTGATCTCAATGGCGGGAACACCTTCATGGCCCCTTTATAGCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540684.5 |
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| CDS CAA 72 bp | ACCAGCTATAAAGGGGCCATGAAGGTGTTCCCGCCATaGAGATCAAAGTCAGATGAAAATATGCCTTCAATC | + |
|
Preference number: 6 (lower is better) Translates to: TSYKGAMKVFPP*RSKSDENMPSI Trigger: GATTGAAGGCATATTTTCATCTGACTTTGATCTCAATGGCGGGAACACCTTCATGGCCCCTTTATAGCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000546117.2 ENST00000660736.1 ENST00000665131.1 ENST00000666903.1 ENST00000671627.1 |
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| CDS CAA 72 bp | ACCAGCTATAAAGGGGCCATGAAGGTGTTCCCGCCATaGAGATCTTATTCCCAGAGAGATTGGAAACATAAT | + |
|
Preference number: 6 (lower is better) Translates to: TSYKGAMKVFPP*RSYSQRDWKHN Trigger: ATTATGTTTCCAATCTCTCTGGGAATAAGATCTCAATGGCGGGAACACCTTCATGGCCCCTTTATAGCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000654541.1 ENST00000655370.1 ENST00000656909.1 ENST00000661743.1 |
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| CDS GCA 72 bp | AAACAATTGAAAGGGGATCAAATCCAGGGGAAATGTTaGACCAGGGTGTACAGATTATGGCTCTTTGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: KQLKGDQIQGKC*TRVYRLWLFDG Trigger: ACCATCAAAGAGCCATAATCTGTACACCCTGGTGCAACATTTCCCCTGGATTTGATCCCCTTTCAATTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656536.1 |
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| CDS CCA 72 bp | CTAGCAGAGTTTACTGTCCTTGTCCCCGCCTGCTTTTaGTCCATTCTCCATCATTGTAGAGAGATATATTTA | + |
|
Preference number: 6 (lower is better) Translates to: LAEFTVLVPACF*SILHHCREIYL Trigger: TAAATATATCTCTCTACAATGATGGAGAATGGACCAAAAGCAGGCGGGGACAAGGACAGTAAACTCTGCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000660736.1 |
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| CDS CCA 72 bp | AGAGTGATGTTCCCAGGAGAAATGATAATGCAGCAATaGACAAGAACAGGAACAAGAGACAGTCTTACCATC | + |
|
Preference number: 6 (lower is better) Translates to: RVMFPGEMIMQQ*TRTGTRDSLTI Trigger: GATGGTAAGACTGTCTCTTGTTCCTGTTCTTGTCCATTGCTGCATTATCATTTCTCCTGGGAACATCACTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659581.1 ENST00000665130.1 ENST00000665986.1 |
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| CDS CAA 72 bp | GGTGGGCACTGGTACTTTTGTATTCCACAGGTATCTTaGGCAACTATCTACTTCTTTCTATCTTCAGGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: GGHWYFCIPQVS*ATIYFFLSSGL Trigger: TAGCCCTGAAGATAGAAAGAAGTAGATAGTTGCCAAAGATACCTGTGGAATACAAAAGTACCAGTGCCCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000660736.1 |
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| CDS CAA 72 bp | CTCGTGGAATGTTTCACTTTGACCAAGGTCTGCATATaGGCAGGGAGCTTACAAAATGGTGCATTTTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: LVECFTLTKVCI*AGSLQNGAFWI Trigger: AATCCAAAATGCACCATTTTGTAAGCTCCCTGCCAATATGCAGACCTTGGTCAAAGTGAAACATTCCACGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS CAA 90 bp | AGAAAACATACCAGCTATAAAGGGGCCATGAAGGTGTTCCCGCCATaGAGATCTTATTCCCAGAGAGATTGGAAACATAATCACCAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RKHTSYKGAMKVFPP*RSYSQRDWKHNHQS Trigger: ACTTTGGTGATTATGTTTCCAATCTCTCTGGGAATAAGATCTCAATGGCGGGAACACCTTCATGGCCCCTTTATAGCTGGTATGTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000654541.1 ENST00000655370.1 ENST00000656909.1 ENST00000661743.1 |
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| CDS TCA 72 bp | ACATTGTTCATGAAACGGGATAATGTGTTTCAGCGATaGACCACCCATGGCCTTACTACAGACATATTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TLFMKRDNVFQR*TTHGLTTDIFP Trigger: TGGAAATATGTCTGTAGTAAGGCCATGGGTGGTTCATCGCTGAAACACATTATCCCGTTTCATGAACAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659581.1 ENST00000665130.1 ENST00000665986.1 |
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| CDS TCA 72 bp | AGGAGACTTCGAAAACTTCACATTGCCGTGTCAATGTaGGGTTGCTGGATGGTTATGACAAGAAATCACATT | + |
|
Preference number: 6 (lower is better) Translates to: RRLRKLHIAVSM*GCWMVMTRNHI Trigger: AATGTGATTTCTTGTCATAACCATCCAGCAACCTCACATTGACACGGCAATGTGAAGTTTTCGAAGTCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000659581.1 ENST00000665130.1 ENST00000665986.1 |
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| CDS GCA 72 bp | TATCACCTTTCCGGTAGCCTCCGGAAATCTCCATTCTaGATTCATGTGCTCATGAGAATGAAATCAACAAAT | + |
|
Preference number: 6 (lower is better) Translates to: YHLSGSLRKSPF*IHVLMRMKSTN Trigger: ATTTGTTGATTTCATTCTCATGAGCACATGAATGCAGAATGGAGATTTCCGGAGGCTACCGGAAAGGTGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS GCA 72 bp | ATGGAGAAATTTCATGATGTTGTTTCTCCAGTTTGTTaGAATATCACCTTTCCGGTAGCCTCCGGAAATCTC | + |
|
Preference number: 6 (lower is better) Translates to: MEKFHDVVSPVC*NITFPVASGNL Trigger: GAGATTTCCGGAGGCTACCGGAAAGGTGATATTGCAACAAACTGGAGAAACAACATCATGAAATTTCTCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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| CDS CAA 90 bp | GGGTTTCCTAGCGAGAAGGAAACACAGTTTATTACATGTTTCTCATaGTCCATAAGAAGAAAACATACCAGCTATAAAGGGGCCATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GFPSEKETQFITCFS*SIRRKHTSYKGAMK Trigger: CTTCATGGCCCCTTTATAGCTGGTATGTTTTCTTCTTATGGACAATGAGAAACATGTAATAAACTGTGTTTCCTTCTCGCTAGGAAACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656536.1 ENST00000666903.1 |
||
| CDS TCA 72 bp | AGGATTCTTTCACAGACCAATAATAATAACATGCCCTaGAAGATAAATGAGGTGAGGTTGACCCTTTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: RILSQTNNNNMP*KINEVRLTLCT Trigger: GGTGCAAAGGGTCAACCTCACCTCATTTATCTTTCAGGGCATGTTATTATTATTGGTCTGTGAAAGAATCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000545508.2 ENST00000662540.1 |
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| CDS CAA 72 bp | ATAGTCTTTTCCACAACTGCTGCTGACAAGTATGTTTaGGATCCCTTCCTTACACCACACACAAAAATTAAC | + |
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Preference number: 6 (lower is better) Translates to: IVFSTTAADKYV*DPFLTPHTKIN Trigger: GTTAATTTTTGTGTGTGGTGTAAGGAAGGGATCCAAAACATACTTGTCAGCAGCAGTTGTGGAAAAGACTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664274.1 |
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| CDS TCA 72 bp | TCCCAGACGTGGTTTCATCTTGCAATTCGATTCCGCTaGATAAATGGACTTGGTTTCATTTTGCAATTTTAT | + |
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Preference number: 6 (lower is better) Translates to: SQTWFHLAIRFR*INGLGFILQFY Trigger: ATAAAATTGCAAAATGAAACCAAGTCCATTTATTCAGCGGAATCGAATTGCAAGATGAAACCACGTCTGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000545508.2 ENST00000662540.1 |
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| CDS TCA 72 bp | CTTTGTAAAGCTCTCTATGGCTGTGTTCTCACTCTTTaGTCACAGGATCTGTTTATCCTTACATTGTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: LCKALYGCVLTL*SQDLFILTLLK Trigger: TTTCAACAATGTAAGGATAAACAGATCCTGTGATCAAAGAGTGAGAACACAGCCATAGAGAGCTTTACAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655370.1 ENST00000656536.1 ENST00000659004.1 ENST00000660736.1 |
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