Pregenerated sensors for LINC00942 (Homo sapiens)
Ensembl gene IDs: ENSG00000249628Ensembl transcript IDs: ENST00000515614.3
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCAAGGCCGACCGAACGCAACCATGGGTGCCGGGCCCTGCCGTGTaGACGTCGGGCCTCACGCGGTCCCCTAGTCCCTCGCCCACCTGC | + |
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Preference number: 5 (lower is better) Translates to: AKADRTQPWVPGPAV*TSGLTRSPSPSPTC Trigger: GCAGGTGGGCGAGGGACTAGGGGACCGCGTGAGGCCCGACGTGCACACGGCAGGGCCCGGCACCCATGGTTGCGTTCGGTCGGCCTTGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS GCA 90 bp | CAAGCAGGAGCCAGCCGGCCAAGGCCGACCGAACGCAACCATGGGTaGCGGGCCCTGCCGTGTGCACGTCGGGCCTCACGCGGTCCCCTA | + |
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Preference number: 5 (lower is better) Translates to: QAGASRPRPTERNHG*RALPCARRASRGPL Trigger: TAGGGGACCGCGTGAGGCCCGACGTGCACACGGCAGGGCCCGGCACCCATGGTTGCGTTCGGTCGGCCTTGGCCGGCTGGCTCCTGCTTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 90 bp | TTTCCAAGCAGGAGCCAGCCGGCCAAGGCCGACCGAACGCAACCATaGGTGCCGGGCCCTGCCGTGTGCACGTCGGGCCTCACGCGGTCC | + |
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Preference number: 5 (lower is better) Translates to: FPSRSQPAKADRTQP*VPGPAVCTSGLTRS Trigger: GGACCGCGTGAGGCCCGACGTGCACACGGCAGGGCCCGGCACCCATGGTTGCGTTCGGTCGGCCTTGGCCGGCTGGCTCCTGCTTGGAAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS GCA 90 bp | GTGTGCACGTCGGGCCTCACGCGGTCCCCTAGTCCCTCGCCCACCTaGCTTCATGTTCAAGGCCCACAATCCAGGCCCCACTTTGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: VCTSGLTRSPSPSPT*LHVQGPQSRPHFAL Trigger: CAGGGCAAAGTGGGGCCTGGATTGTGGGCCTTGAACATGAAGGCAGGTGGGCGAGGGACTAGGGGACCGCGTGAGGCCCGACGTGCACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 90 bp | ACGCCAGCTCCACGGAGGGACAGCTTTGTCACATGTAGGATGGGGTaGCCCCTGTCCCGGGTGCCACGAGGTCCTGTCCTTGGCAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: TPAPRRDSFVTCRMG*PLSRVPRGPVLGKL Trigger: AAGCTTGCCAAGGACAGGACCTCGTGGCACCCGGGACAGGGGCCACCCCATCCTACATGTGACAAAGCTGTCCCTCCGTGGAGCTGGCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS GCA 90 bp | GGGACAGCTTTGTCACATGTAGGATGGGGTGGCCCCTGTCCCGGGTaGCACGAGGTCCTGTCCTTGGCAAGCTTATGTCGGATCGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: GTALSHVGWGGPCPG*HEVLSLASLCRIVG Trigger: CCCCACGATCCGACATAAGCTTGCCAAGGACAGGACCTCGTGGCACCCGGGACAGGGGCCACCCCATCCTACATGTGACAAAGCTGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 90 bp | GGTGTAGGTGGAGCGGGCTGTTTGCAGTGTGAAAGCTTCTCTGGCTaGTCTGCCACGCTGGGTCCTGTCCTGAGCCCCGTGCTCACTGTG | + |
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Preference number: 5 (lower is better) Translates to: GVGGAGCLQCESFSG*SATLGPVLSPVLTV Trigger: CACAGTGAGCACGGGGCTCAGGACAGGACCCAGCGTGGCAGACCAGCCAGAGAAGCTTTCACACTGCAAACAGCCCGCTCCACCTACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS TCA 90 bp | GCGCCCTCACAAGCAGGGCTTTCCCGTGTGTGTCTTGTGGGAGGCTaGCATGGTCCCTGCCCCTGCTGGAGCAGCATCTTGTGTTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: APSQAGLSRVCLVGG*HGPCPCWSSILCLE Trigger: CTCCAAACACAAGATGCTGCTCCAGCAGGGGCAGGGACCATGTCAGCCTCCCACAAGACACACACGGGAAAGCCCTGCTTGTGAGGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS GCA 90 bp | ATTCTGGCCAGTTCTCAGTCTTGCAGGGGTCGGCCCTCCTCCCCCTaGCTTGCTCTGGGCCCTTTAGGCGTGAAGGAGGCTCCATTTGCT | + |
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Preference number: 5 (lower is better) Translates to: ILASSQSCRGRPSSP*LALGPLGVKEAPFA Trigger: AGCAAATGGAGCCTCCTTCACGCCTAAAGGGCCCAGAGCAAGGCAGGGGGAGGAGGGCCGACCCCTGCAAGACTGAGAACTGGCCAGAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS GCA 90 bp | CTGAGCCCCGTGCTCACTGTGGAGTCGTGTCTTCATTCTGATTCCTaGCCTGGGTGTGGCGCCCTCACAAGCAGGGCTTTCCCGTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: LSPVLTVESCLHSDS*PGCGALTSRAFPCV Trigger: CACACACGGGAAAGCCCTGCTTGTGAGGGCGCCACACCCAGGGCAGGAATCAGAATGAAGACACGACTCCACAGTGAGCACGGGGCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 90 bp | CCACTGGGACTTCGCTCTCTTGCTAGTCTAGCAAGTGGGCAATTCTaGCCAGTTCTCAGTCTTGCAGGGGTCGGCCCTCCTCCCCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: PLGLRSLASLASGQF*PVLSLAGVGPPPPA Trigger: GGCAGGGGGAGGAGGGCCGACCCCTGCAAGACTGAGAACTGGCCAGAATTGCCCACTTGCTAGACTAGCAAGAGAGCGAAGTCCCAGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 90 bp | CTCACAAGCAGGGCTTTCCCGTGTGTGTCTTGTGGGAGGCTGACATaGTCCCTGCCCCTGCTGGAGCAGCATCTTGTGTTTGGAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: LTSRAFPCVSCGRLT*SLPLLEQHLVFGGG Trigger: TCCTCCTCCAAACACAAGATGCTGCTCCAGCAGGGGCAGGGACCATGTCAGCCTCCCACAAGACACACACGGGAAAGCCCTGCTTGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 90 bp | AAGACCAGTGGGTCTCCTGAAGCCATTTGGCCACTGAAGTCTAGGTaGCCAGAGAAAGACCAGCACAGAGCTGCACCCACCACCAAGGCG | + |
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Preference number: 5 (lower is better) Translates to: KTSGSPEAIWPLKSR*PEKDQHRAAPTTKA Trigger: CGCCTTGGTGGTGGGTGCAGCTCTGTGCTGGTCTTTCTCTGGCCACCTAGACTTCAGTGGCCAAATGGCTTCAGGAGACCCACTGGTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS TCA 90 bp | CCTGCCTTCATGTTCAAGGCCCACAATCCAGGCCCCACTTTGCCCTaGAATGGAGAGCTGATTCCTTGCCATTCCGCAGGACAAGCGTCC | + |
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Preference number: 5 (lower is better) Translates to: PAFMFKAHNPGPTLP*NGELIPCHSAGQAS Trigger: GGACGCTTGTCCTGCGGAATGGCAAGGAATCAGCTCTCCATTTCAGGGCAAAGTGGGGCCTGGATTGTGGGCCTTGAACATGAAGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS GCA 90 bp | GTGAAGTCTCTCAGGGCCCACCCCGTGCCACAGACCTTCCTCGGTTaGAGAGATTCTGGGCAAAGCATCCGTGCTCTCATGAGATTATCC | + |
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Preference number: 5 (lower is better) Translates to: VKSLRAHPVPQTFLG*RDSGQSIRALMRLS Trigger: GGATAATCTCATGAGAGCACGGATGCTTTGCCCAGAATCTCTGCAACCGAGGAAGGTCTGTGGCACGGGGTGGGCCCTGAGAGACTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 90 bp | CAGGGCCCACCCCGTGCCACAGACCTTCCTCGGTTGCAGAGATTCTaGGCAAAGCATCCGTGCTCTCATGAGATTATCCTGGGGAGATTT | + |
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Preference number: 5 (lower is better) Translates to: QGPPRATDLPRLQRF*AKHPCSHEIILGRF Trigger: AAATCTCCCCAGGATAATCTCATGAGAGCACGGATGCTTTGCCCAGAATCTCTGCAACCGAGGAAGGTCTGTGGCACGGGGTGGGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS TCA 90 bp | CTTCGTCACGTGGAGACCCTCACACTTGGCCAGGGCCCGTGTGTGTaGACAAAGAGTCAGGTTGTGTGGCTGTACACACACACACACACA | + |
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Preference number: 5 (lower is better) Translates to: LRHVETLTLGQGPCV*TKSQVVWLYTHTHT Trigger: TGTGTGTGTGTGTGTGTACAGCCACACAACCTGACTCTTTGTTCACACACACGGGCCCTGGCCAAGTGTGAGGGTCTCCACGTGACGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS TCA 90 bp | GGCCCTTTAGGCGTGAAGGAGGCTCCATTTGCTAAGGAAACAGTGTaGGGAGAGCAGAAGCAGGAACAGCTTAGAGGTCTTGCCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: GPLGVKEAPFAKETV*GEQKQEQLRGLASS Trigger: GGAGCTGGCAAGACCTCTAAGCTGTTCCTGCTTCTGCTCTCCTCACACTGTTTCCTTAGCAAATGGAGCCTCCTTCACGCCTAAAGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 90 bp | CTTCATGTTCAAGGCCCACAATCCAGGCCCCACTTTGCCCTGAAATaGAGAGCTGATTCCTTGCCATTCCGCAGGACAAGCGTCCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: LHVQGPQSRPHFALK*RADSLPFRRTSVLS Trigger: AGACAGGACGCTTGTCCTGCGGAATGGCAAGGAATCAGCTCTCCATTTCAGGGCAAAGTGGGGCCTGGATTGTGGGCCTTGAACATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS TCA 90 bp | ATAAAACAGGAAAGACCAGTGGGTCTCCTGAAGCCATTTGGCCACTaGAGTCTAGGTGGCCAGAGAAAGACCAGCACAGAGCTGCACCCA | + |
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Preference number: 5 (lower is better) Translates to: IKQERPVGLLKPFGH*SLGGQRKTSTELHP Trigger: TGGGTGCAGCTCTGTGCTGGTCTTTCTCTGGCCACCTAGACTTCAGTGGCCAAATGGCTTCAGGAGACCCACTGGTCTTTCCTGTTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS GCA 90 bp | GCCACAGACCTTCCTCGGTTGCAGAGATTCTGGGCAAAGCATCCGTaGTCTCATGAGATTATCCTGGGGAGATTTAGAAGAATTTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: ATDLPRLQRFWAKHP*SHEIILGRFRRILW Trigger: CCACAAAATTCTTCTAAATCTCCCCAGGATAATCTCATGAGAGCACGGATGCTTTGCCCAGAATCTCTGCAACCGAGGAAGGTCTGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 90 bp | TGCAGAGATTCTGGGCAAAGCATCCGTGCTCTCATGAGATTATCCTaGGGAGATTTAGAAGAATTTTGTGGCCAGTCCCAAGCTGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: CRDSGQSIRALMRLS*GDLEEFCGQSQAVL Trigger: CAGCACAGCTTGGGACTGGCCACAAAATTCTTCTAAATCTCCCCAGGATAATCTCATGAGAGCACGGATGCTTTGCCCAGAATCTCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 90 bp | GAGGAGCGGAGGAATCTTTGGGAAGACTGGCTGTATTTCAGTACCTaGCAAATTTCCAGAACATCAAATGAGCCCTTAAGCAGGAAGACT | + |
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Preference number: 5 (lower is better) Translates to: EERRNLWEDWLYFST*QISRTSNEPLSRKT Trigger: AGTCTTCCTGCTTAAGGGCTCATTTGATGTTCTGGAAATTTGCCAGGTACTGAAATACAGCCAGTCTTCCCAAAGATTCCTCCGCTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 72 bp | AGGAGCCAGCCGGCCAAGGCCGACCGAACGCAACCATaGGTGCCGGGCCCTGCCGTGTGCACGTCGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RSQPAKADRTQP*VPGPAVCTSGL Trigger: GAGGCCCGACGTGCACACGGCAGGGCCCGGCACCCATGGTTGCGTTCGGTCGGCCTTGGCCGGCTGGCTCCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS GCA 72 bp | GACCGAACGCAACCATGGGTGCCGGGCCCTGCCGTGTaGACGTCGGGCCTCACGCGGTCCCCTAGTCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: DRTQPWVPGPAV*TSGLTRSPSPS Trigger: CGAGGGACTAGGGGACCGCGTGAGGCCCGACGTGCACACGGCAGGGCCCGGCACCCATGGTTGCGTTCGGTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 72 bp | CTTAGAGGTCTTGCCAGCTCCTGCGCCACCCTGCTCTaGCCACGGGGTGGGTGGCTGTGTCGGGGCTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: LRGLASSCATLL*PRGGWLCRGCA Trigger: GGCACAGCCCCGACACAGCCACCCACCCCGTGGCCAGAGCAGGGTGGCGCAGGAGCTGGCAAGACCTCTAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS GCA 72 bp | TCGGGCCTCACGCGGTCCCCTAGTCCCTCGCCCACCTaGCTTCATGTTCAAGGCCCACAATCCAGGCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: SGLTRSPSPSPT*LHVQGPQSRPH Trigger: GTGGGGCCTGGATTGTGGGCCTTGAACATGAAGGCAGGTGGGCGAGGGACTAGGGGACCGCGTGAGGCCCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS GCA 72 bp | AGTTCTCAGTCTTGCAGGGGTCGGCCCTCCTCCCCCTaGCTTGCTCTGGGCCCTTTAGGCGTGAAGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SSQSCRGRPSSP*LALGPLGVKEA Trigger: AGCCTCCTTCACGCCTAAAGGGCCCAGAGCAAGGCAGGGGGAGGAGGGCCGACCCCTGCAAGACTGAGAACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 72 bp | GGAGCGGGCTGTTTGCAGTGTGAAAGCTTCTCTGGCTaGTCTGCCACGCTGGGTCCTGTCCTGAGCCCCGTG | + |
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Preference number: 6 (lower is better) Translates to: GAGCLQCESFSG*SATLGPVLSPV Trigger: CACGGGGCTCAGGACAGGACCCAGCGTGGCAGACCAGCCAGAGAAGCTTTCACACTGCAAACAGCCCGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 72 bp | CCACGGAGGGACAGCTTTGTCACATGTAGGATGGGGTaGCCCCTGTCCCGGGTGCCACGAGGTCCTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: PRRDSFVTCRMG*PLSRVPRGPVL Trigger: AAGGACAGGACCTCGTGGCACCCGGGACAGGGGCCACCCCATCCTACATGTGACAAAGCTGTCCCTCCGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CAA 72 bp | TGGCGCCCTCACAAGCAGGGCTTTCCCGTGTGTGTCTaGTGGGAGGCTGACATGGTCCCTGCCCCTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: WRPHKQGFPVCV*WEADMVPAPAG Trigger: TCCAGCAGGGGCAGGGACCATGTCAGCCTCCCACAAGACACACACGGGAAAGCCCTGCTTGTGAGGGCGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CAA 72 bp | GGTGGCCCCTGTCCCGGGTGCCACGAGGTCCTGTCCTaGGCAAGCTTATGTCGGATCGTGGGGATGAGATGC | + |
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Preference number: 6 (lower is better) Translates to: GGPCPGCHEVLS*ASLCRIVGMRC Trigger: GCATCTCATCCCCACGATCCGACATAAGCTTGCCAAGGACAGGACCTCGTGGCACCCGGGACAGGGGCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS GCA 72 bp | CCACCAAGGCGCCCTCCCTCCTTCCTTCATCTTCACTaGCTCCCTCAGGCCGAGGAAATCAGAGACGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PPRRPPSFLHLH*LPQAEEIRDAS Trigger: GCTGGCGTCTCTGATTTCCTCGGCCTGAGGGAGGCAGTGAAGATGAAGGAAGGAGGGAGGGCGCCTTGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CAA 72 bp | GTGGAGCCCAGTCGGGGTGTAGGTGGAGCGGGCTGTTaGCAGTGTGAAAGCTTCTCTGGCTGGTCTGCCACG | + |
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Preference number: 6 (lower is better) Translates to: VEPSRGVGGAGC*QCESFSGWSAT Trigger: CGTGGCAGACCAGCCAGAGAAGCTTTCACACTGCAAACAGCCCGCTCCACCTACACCCCGACTGGGCTCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS TCA 72 bp | CAAGCAGGGCTTTCCCGTGTGTGTCTTGTGGGAGGCTaGCATGGTCCCTGCCCCTGCTGGAGCAGCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: QAGLSRVCLVGG*HGPCPCWSSIL Trigger: CAAGATGCTGCTCCAGCAGGGGCAGGGACCATGTCAGCCTCCCACAAGACACACACGGGAAAGCCCTGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS TCA 72 bp | GTGCGGAAACGTCATCAATTCCAAGCCTTCTGGAGATaGACCGCCGAGGGGGTGACGCTGAGTGGGCGTGGG | + |
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Preference number: 6 (lower is better) Translates to: VRKRHQFQAFWR*TAEGVTLSGRG Trigger: CCCACGCCCACTCAGCGTCACCCCCTCGGCGGTTCATCTCCAGAAGGCTTGGAATTGATGACGTTTCCGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CAA 72 bp | TCTCAGGGCCCACCCCGTGCCACAGACCTTCCTCGGTaGCAGAGATTCTGGGCAAAGCATCCGTGCTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: SQGPPRATDLPR*QRFWAKHPCSH Trigger: ATGAGAGCACGGATGCTTTGCCCAGAATCTCTGCAACCGAGGAAGGTCTGTGGCACGGGGTGGGCCCTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS GCA 72 bp | GTGCTCACTGTGGAGTCGTGTCTTCATTCTGATTCCTaGCCTGGGTGTGGCGCCCTCACAAGCAGGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: VLTVESCLHSDS*PGCGALTSRAF Trigger: GAAAGCCCTGCTTGTGAGGGCGCCACACCCAGGGCAGGAATCAGAATGAAGACACGACTCCACAGTGAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 72 bp | AGGGCTTTCCCGTGTGTGTCTTGTGGGAGGCTGACATaGTCCCTGCCCCTGCTGGAGCAGCATCTTGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: RAFPCVSCGRLT*SLPLLEQHLVF Trigger: AAACACAAGATGCTGCTCCAGCAGGGGCAGGGACCATGTCAGCCTCCCACAAGACACACACGGGAAAGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 72 bp | GGGTCTCCTGAAGCCATTTGGCCACTGAAGTCTAGGTaGCCAGAGAAAGACCAGCACAGAGCTGCACCCACC | + |
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Preference number: 6 (lower is better) Translates to: GSPEAIWPLKSR*PEKDQHRAAPT Trigger: GGTGGGTGCAGCTCTGTGCTGGTCTTTCTCTGGCCACCTAGACTTCAGTGGCCAAATGGCTTCAGGAGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS TCA 72 bp | GTGGAGACCCTCACACTTGGCCAGGGCCCGTGTGTGTaGACAAAGAGTCAGGTTGTGTGGCTGTACACACAC | + |
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Preference number: 6 (lower is better) Translates to: VETLTLGQGPCV*TKSQVVWLYTH Trigger: GTGTGTGTACAGCCACACAACCTGACTCTTTGTTCACACACACGGGCCCTGGCCAAGTGTGAGGGTCTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 72 bp | CAAGGCCCACAATCCAGGCCCCACTTTGCCCTGAAATaGAGAGCTGATTCCTTGCCATTCCGCAGGACAAGC | + |
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Preference number: 6 (lower is better) Translates to: QGPQSRPHFALK*RADSLPFRRTS Trigger: GCTTGTCCTGCGGAATGGCAAGGAATCAGCTCTCCATTTCAGGGCAAAGTGGGGCCTGGATTGTGGGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 72 bp | CTTCGCTCTCTTGCTAGTCTAGCAAGTGGGCAATTCTaGCCAGTTCTCAGTCTTGCAGGGGTCGGCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LRSLASLASGQF*PVLSLAGVGPP Trigger: AGGAGGGCCGACCCCTGCAAGACTGAGAACTGGCCAGAATTGCCCACTTGCTAGACTAGCAAGAGAGCGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CAA 90 bp | CCCTCACACTTGGCCAGGGCCCGTGTGTGTGAACAAAGAGTCAGGTaGTGTGGCTGTACACACACACACACACACACACACGTGCACTCA | + |
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Preference number: 6 (lower is better) Translates to: PSHLARARVCEQRVR*CGCTHTHTHTHVHS Trigger: TGAGTGCACGTGTGTGTGTGTGTGTGTGTGTGTACAGCCACACAACCTGACTCTTTGTTCACACACACGGGCCCTGGCCAAGTGTGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS TCA 72 bp | ATGTTCAAGGCCCACAATCCAGGCCCCACTTTGCCCTaGAATGGAGAGCTGATTCCTTGCCATTCCGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: MFKAHNPGPTLP*NGELIPCHSAG Trigger: TCCTGCGGAATGGCAAGGAATCAGCTCTCCATTTCAGGGCAAAGTGGGGCCTGGATTGTGGGCCTTGAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS TCA 72 bp | GAAAGACCAGTGGGTCTCCTGAAGCCATTTGGCCACTaGAGTCTAGGTGGCCAGAGAAAGACCAGCACAGAG | + |
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Preference number: 6 (lower is better) Translates to: ERPVGLLKPFGH*SLGGQRKTSTE Trigger: CTCTGTGCTGGTCTTTCTCTGGCCACCTAGACTTCAGTGGCCAAATGGCTTCAGGAGACCCACTGGTCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 72 bp | TACTCATTTCCTTCGTCACGTGGAGACCCTCACACTTaGCCAGGGCCCGTGTGTGTGAACAAAGAGTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: YSFPSSRGDPHT*PGPVCVNKESG Trigger: ACCTGACTCTTTGTTCACACACACGGGCCCTGGCCAAGTGTGAGGGTCTCCACGTGACGAAGGAAATGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CAA 72 bp | TTACTCATTTCCTTCGTCACGTGGAGACCCTCACACTaGGCCAGGGCCCGTGTGTGTGAACAAAGAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LLISFVTWRPSH*ARARVCEQRVR Trigger: CCTGACTCTTTGTTCACACACACGGGCCCTGGCCAAGTGTGAGGGTCTCCACGTGACGAAGGAAATGAGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CAA 90 bp | GAAGACTCCTCTGCAGAACTAACACCTGCAGTAGATTCTGAGCGTTaGCCTCCTCACCAGACTCAGTACTGTTTCCCGCAGACACCACCC | + |
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Preference number: 6 (lower is better) Translates to: EDSSAELTPAVDSER*PPHQTQYCFPQTPP Trigger: GGGTGGTGTCTGCGGGAAACAGTACTGAGTCTGGTGAGGAGGCAAACGCTCAGAATCTACTGCAGGTGTTAGTTCTGCAGAGGAGTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 72 bp | GCAAGTTCAGTGACGCAGAATCGCAAAAGCCCCTCGTaGTGCGGAAACGTCATCAATTCCAAGCCTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: ASSVTQNRKSPS*CGNVINSKPSG Trigger: TCCAGAAGGCTTGGAATTGATGACGTTTCCGCACCACGAGGGGCTTTTGCGATTCTGCGTCACTGAACTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS GCA 72 bp | AGTTCAGTGACGCAGAATCGCAAAAGCCCCTCGTGGTaGGGAAACGTCATCAATTCCAAGCCTTCTGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: SSVTQNRKSPSW*GNVINSKPSGD Trigger: ATCTCCAGAAGGCTTGGAATTGATGACGTTTCCGCACCACGAGGGGCTTTTGCGATTCTGCGTCACTGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CAA 72 bp | TCTGCAGAACTAACACCTGCAGTAGATTCTGAGCGTTaGCCTCCTCACCAGACTCAGTACTGTTTCCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: SAELTPAVDSER*PPHQTQYCFPQ Trigger: CTGCGGGAAACAGTACTGAGTCTGGTGAGGAGGCAAACGCTCAGAATCTACTGCAGGTGTTAGTTCTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CCA 72 bp | CACACACACGTGCACTCAGAGGAGCGGAGGAATCTTTaGGAAGACTGGCTGTATTTCAGTACCTGGCAAATT | + |
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Preference number: 6 (lower is better) Translates to: HTHVHSEERRNL*EDWLYFSTWQI Trigger: AATTTGCCAGGTACTGAAATACAGCCAGTCTTCCCAAAGATTCCTCCGCTCCTCTGAGTGCACGTGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CAA 72 bp | ACACACACACGTGCACTCAGAGGAGCGGAGGAATCTTaGGGAAGACTGGCTGTATTTCAGTACCTGGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: THTRALRGAEES*GRLAVFQYLAN Trigger: ATTTGCCAGGTACTGAAATACAGCCAGTCTTCCCAAAGATTCCTCCGCTCCTCTGAGTGCACGTGTGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS TCA 72 bp | AGACTCCTCTGCAGAACTAACACCTGCAGTAGATTCTaGGCGTTTGCCTCCTCACCAGACTCAGTACTGTTT | + |
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Preference number: 6 (lower is better) Translates to: RLLCRTNTCSRF*AFASSPDSVLF Trigger: AAACAGTACTGAGTCTGGTGAGGAGGCAAACGCTCAGAATCTACTGCAGGTGTTAGTTCTGCAGAGGAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS GCA 72 bp | CTTCCTCGGTTGCAGAGATTCTGGGCAAAGCATCCGTaGTCTCATGAGATTATCCTGGGGAGATTTAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: LPRLQRFWAKHP*SHEIILGRFRR Trigger: TCTTCTAAATCTCCCCAGGATAATCTCATGAGAGCACGGATGCTTTGCCCAGAATCTCTGCAACCGAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CAA 72 bp | GCTCCGTGTAGCATTACCCCAAAGACTCTGTCCAAGTaGGCAAGAATCGCACATTGGGCTGTTTGGCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: APCSITPKTLSK*ARIAHWAVWLL Trigger: TAAAAGCCAAACAGCCCAATGTGCGATTCTTGCCAACTTGGACAGAGTCTTTGGGGTAATGCTACACGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CAA 90 bp | TCTGGATTAGCTCCGTGTAGCATTACCCCAAAGACTCTGTCCAAGTaGGCAAGAATCGCACATTGGGCTGTTTGGCTTTTAATAAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: SGLAPCSITPKTLSK*ARIAHWAVWLLIKF Trigger: AAACTTTATTAAAAGCCAAACAGCCCAATGTGCGATTCTTGCCAACTTGGACAGAGTCTTTGGGGTAATGCTACACGGAGCTAATCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CAA 72 bp | CCCAAAGACTCTGTCCAAGTTGGCAAGAATCGCACATaGGGCTGTTTGGCTTTTAATAAAGTTTATGATTTA | + |
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Preference number: 6 (lower is better) Translates to: PKDSVQVGKNRT*GCLAFNKVYDL Trigger: TAAATCATAAACTTTATTAAAAGCCAAACAGCCCAATGTGCGATTCTTGCCAACTTGGACAGAGTCTTTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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| CDS CAA 72 bp | GTTTATGATTTAAATCTTGTGCTCTTAACACCTTCTTaGCAAGCCTCAGAGGGAAACAACAATGTTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: VYDLNLVLLTPS*QASEGNNNVEV Trigger: AACTTCAACATTGTTGTTTCCCTCTGAGGCTTGCAAAGAAGGTGTTAAGAGCACAAGATTTAAATCATAAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515614.3 |
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