Pregenerated sensors for LINC00940 (Homo sapiens)
Ensembl gene IDs: ENSG00000235049Ensembl transcript IDs: ENST00000418006.1, ENST00000643739.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGCCTGTGCGTCCATCCCCGCGGAGCTGGTGGCAGAGTGGCGGATaGCGTGGTGGAGCACTGCATGGAGCACTGACGGATGACACGTGC | + |
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Preference number: 5 (lower is better) Translates to: GPVRPSPRSWWQSGG*RGGALHGALTDDTC Trigger: GCACGTGTCATCCGTCAGTGCTCCATGCAGTGCTCCACCACGGCATCCGCCACTCTGCCACCAGCTCCGCGGGGATGGACGCACAGGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 90 bp | AAGACGACCAGCATCTCCTCAGGGCAGGGCCATGACTGGGGCCTGTaGGTCCATCCCCGCGGAGCTGGTGGCAGAGTGGCGGATGCCGTG | + |
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Preference number: 5 (lower is better) Translates to: KTTSISSGQGHDWGL*VHPRGAGGRVADAV Trigger: CACGGCATCCGCCACTCTGCCACCAGCTCCGCGGGGATGGACGCACAGGCCCCAGTCATGGCCCTGCCCTGAGGAGATGCTGGTCGTCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 90 bp | CCCAAGGTCCTGGCCGCTGTTTGGGAGCCAGTCCCCCGGCCTTCCTaGGTGGATACGGGAATGCTCAGCCTTGAGCCGGGGGCACATCAG | + |
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Preference number: 5 (lower is better) Translates to: PKVLAAVWEPVPRPS*VDTGMLSLEPGAHQ Trigger: CTGATGTGCCCCCGGCTCAAGGCTGAGCATTCCCGTATCCACGCAGGAAGGCCGGGGGACTGGCTCCCAAACAGCGGCCAGGACCTTGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CCA 90 bp | ATGAGCAGGAAGACGACCAGCATCTCCTCAGGGCAGGGCCATGACTaGGGCCTGTGCGTCCATCCCCGCGGAGCTGGTGGCAGAGTGGCG | + |
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Preference number: 5 (lower is better) Translates to: MSRKTTSISSGQGHD*GLCVHPRGAGGRVA Trigger: CGCCACTCTGCCACCAGCTCCGCGGGGATGGACGCACAGGCCCCAGTCATGGCCCTGCCCTGAGGAGATGCTGGTCGTCTTCCTGCTCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CCA 90 bp | GGCTGCCACTGCTCCCATGCTGATTCCCAGGGCTCGTCCCAGACCTaGATCCAAAGCCCTGAGGTGCAGGGCCCCAGTCTCCCTGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: GCHCSHADSQGSSQT*IQSPEVQGPSLPGC Trigger: GCACCCAGGGAGACTGGGGCCCTGCACCTCAGGGCTTTGGATCCAGGTCTGGGACGAGCCCTGGGAATCAGCATGGGAGCAGTGGCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 90 bp | CTCCGTTCCCTTCTCTCCCACGGTGCCCAGCAAGCCTTCGTTACCTaGCCACTCTGTCCCTGGCCCTGTGCCTGGCCCCAGGGTCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: LRSLLSHGAQQAFVT*PLCPWPCAWPQGPE Trigger: TTCTGGACCCTGGGGCCAGGCACAGGGCCAGGGACAGAGTGGGCAGGTAACGAAGGCTTGCTGGGCACCGTGGGAGAGAAGGGAACGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 90 bp | ACCCTGTGGTCATCGTGGCTCCCCTTGTCATTATCACCCTCCTCATaGCCGTGGCCACCATGCATGGGTGGGGGCCGGGTCCCACCGGGA | + |
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Preference number: 5 (lower is better) Translates to: TLWSSWLPLSLSPSS*PWPPCMGGGRVPPG Trigger: TCCCGGTGGGACCCGGCCCCCACCCATGCATGGTGGCCACGGGCATGAGGAGGGTGATAATGACAAGGGGAGCCACGATGACCACAGGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS TCA 90 bp | GTGAATGAGCAGGAAGACGACCAGCATCTCCTCAGGGCAGGGCCATaGCTGGGGCCTGTGCGTCCATCCCCGCGGAGCTGGTGGCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: VNEQEDDQHLLRAGP*LGPVRPSPRSWWQS Trigger: ACTCTGCCACCAGCTCCGCGGGGATGGACGCACAGGCCCCAGTCATGGCCCTGCCCTGAGGAGATGCTGGTCGTCTTCCTGCTCATTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 90 bp | CCGAGGCTTGGATTTCTTTCTTCTGCCTCCCTCAGAAGCCTGGGCTaGACAGCTTGGGCTGCTAGCTGGCGCGGGGCCACGCGCCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: PRLGFLSSASLRSLG*TAWAASWRGATRLS Trigger: AGACAGGCGCGTGGCCCCGCGCCAGCTAGCAGCCCAAGCTGTGCAGCCCAGGCTTCTGAGGGAGGCAGAAGAAAGAAATCCAAGCCTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 90 bp | CTGTTTGGGAGCCAGTCCCCCGGCCTTCCTGCGTGGATACGGGAATaGTCAGCCTTGAGCCGGGGGCACATCAGAGGAGCAGTGAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: LFGSQSPGLPAWIRE*SALSRGHIRGAVRA Trigger: TGCCCTCACTGCTCCTCTGATGTGCCCCCGGCTCAAGGCTGAGCATTCCCGTATCCACGCAGGAAGGCCGGGGGACTGGCTCCCAAACAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 90 bp | TTCAGGTTGTCCTCCAGCCAGCTCCCCTCAGGGCCACAGGATGGCTaGCACTGCTCCCATGCTGATTCCCAGGGCTCGTCCCAGACCTGG | + |
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Preference number: 5 (lower is better) Translates to: FRLSSSQLPSGPQDG*HCSHADSQGSSQTW Trigger: CCAGGTCTGGGACGAGCCCTGGGAATCAGCATGGGAGCAGTGGCAGCCATCCTGTGGCCCTGAGGGGAGCTGGCTGGAGGACAACCTGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CCA 90 bp | CTTGTCCGAGGCTTGGATTTCTTTCTTCTGCCTCCCTCAGAAGCCTaGGCTGCACAGCTTGGGCTGCTAGCTGGCGCGGGGCCACGCGCC | + |
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Preference number: 5 (lower is better) Translates to: LVRGLDFFLLPPSEA*AAQLGLLAGAGPRA Trigger: GGCGCGTGGCCCCGCGCCAGCTAGCAGCCCAAGCTGTGCAGCCCAGGCTTCTGAGGGAGGCAGAAGAAAGAAATCCAAGCCTCGGACAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 90 bp | TGGCTCCCCTTGTCATTATCACCCTCCTCATGCCCGTGGCCACCATaGATGGGTGGGGGCCGGGTCCCACCGGGAAGTCTGTCTGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: WLPLSLSPSSCPWPP*MGGGRVPPGSLSVA Trigger: TGCTACAGACAGACTTCCCGGTGGGACCCGGCCCCCACCCATGCATGGTGGCCACGGGCATGAGGAGGGTGATAATGACAAGGGGAGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS TCA 90 bp | GAGTGGCGGATGCCGTGGTGGAGCACTGCATGGAGCACTGACGGATaGCACGTGCACATGGCGATGAGGACGACACCTCCTTCCTGCCGT | + |
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Preference number: 5 (lower is better) Translates to: EWRMPWWSTAWSTDG*HVHMAMRTTPPSCR Trigger: ACGGCAGGAAGGAGGTGTCGTCCTCATCGCCATGTGCACGTGTCATCCGTCAGTGCTCCATGCAGTGCTCCACCACGGCATCCGCCACTC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS TCA 90 bp | GGTGGCAGAGTGGCGGATGCCGTGGTGGAGCACTGCATGGAGCACTaGCGGATGACACGTGCACATGGCGATGAGGACGACACCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: GGRVADAVVEHCMEH*RMTRAHGDEDDTSF Trigger: GAAGGAGGTGTCGTCCTCATCGCCATGTGCACGTGTCATCCGTCAGTGCTCCATGCAGTGCTCCACCACGGCATCCGCCACTCTGCCACC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CCA 90 bp | CTTGTCATTATCACCCTCCTCATGCCCGTGGCCACCATGCATGGGTaGGGGCCGGGTCCCACCGGGAAGTCTGTCTGTAGCAGTCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: LVIITLLMPVATMHG*GPGPTGKSVCSSLP Trigger: AGGGAGACTGCTACAGACAGACTTCCCGGTGGGACCCGGCCCCCACCCATGCATGGTGGCCACGGGCATGAGGAGGGTGATAATGACAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 90 bp | CGGGATGTCACCCAGGACGCAGGTTCCTTCTGTGTTTCCTCCTGCTaGCCTCAGCATTTCAGGTTGTCCTCCAGCCAGCTCCCCTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: RDVTQDAGSFCVSSC*PQHFRLSSSQLPSG Trigger: CCCTGAGGGGAGCTGGCTGGAGGACAACCTGAAATGCTGAGGGCAGCAGGAGGAAACACAGAAGGAACCTGCGTCCTGGGTGACATCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 90 bp | AGGAGGAGGAGGAGACAACCAGATAGGCATGGGGATGGTTCCGTCTaGTCGGGCTCACTTGTCCACTGGCCTGGATCCCTCAGGCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: RRRRRQPDRHGDGSV*SGSLVHWPGSLRPP Trigger: TGGAGGCCTGAGGGATCCAGGCCAGTGGACAAGTGAGCCCGAGCAGACGGAACCATCCCCATGCCTATCTGGTTGTCTCCTCCTCCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CCA 90 bp | CCACCTCAGGGAGCTCAGAGCCATCAGAAGACTGCCCTGCAGGGGTaGGGTGGCTACCACTTACTGCTTCCGGCTGCAAGGAGCAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: PPQGAQSHQKTALQG*GGYHLLLPAARSRK Trigger: TTTCCTGCTCCTTGCAGCCGGAAGCAGTAAGTGGTAGCCACCCCACCCCTGCAGGGCAGTCTTCTGATGGCTCTGAGCTCCCTGAGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CCA 90 bp | GGAGGTTTGTCCTCTCAGTCTGAGCCATGTGCTCATTTCAGAGTGTaGGGAAGGAGGGGTAAGGCGGGGAAGGAGGAGGAGGAGGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: GGLSSQSEPCAHFRV*GRRGKAGKEEEEEE Trigger: CTCCTCCTCCTCCTCCTCCTTCCCCGCCTTACCCCTCCTTCCCCACACTCTGAAATGAGCACATGGCTCAGACTGAGAGGACAAACCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS TCA 90 bp | TTCACAGCCTCAGTTCCTCTCTGGTGGGGCCTCCTTGGGTCCCCATaGAGAGACTGCTCTCCACGAACCTTTCCTTCTCTGCCTGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: FTASVPLWWGLLGSP*RDCSPRTFPSLPVW Trigger: CCAGACAGGCAGAGAAGGAAAGGTTCGTGGAGAGCAGTCTCTTCATGGGGACCCAAGGAGGCCCCACCAGAGAGGAACTGAGGCTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CCA 90 bp | CTCACTCTGCCTGGGTCTCATGCCCTTATGAGGGTGGTTTCTGCCTaGGGTAAACCCTATGTGTTCGAACACCTGCTGCTCCACTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: LTLPGSHALMRVVSA*GKPYVFEHLLLHWA Trigger: GGCCCAGTGGAGCAGCAGGTGTTCGAACACATAGGGTTTACCCCAGGCAGAAACCACCCTCATAAGGGCATGAGACCCAGGCAGAGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 90 bp | ATCAGAGGAGCAGTGAGGGCAGCACGTCCTGGAGTGAGCAGAGGCTaGAGACAGGGCTTCCACGCAGACCGTTTGCCTGTTACCAAATTT | + |
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Preference number: 5 (lower is better) Translates to: IRGAVRAARPGVSRG*RQGFHADRLPVTKF Trigger: AAATTTGGTAACAGGCAAACGGTCTGCGTGGAAGCCCTGTCTGCAGCCTCTGCTCACTCCAGGACGTGCTGCCCTCACTGCTCCTCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 90 bp | GACGTGATCTTGGGCACTTCCAACTCAATTTCCTCCTCAATAGAATaGAGGGCAATGATACCTGCCCTGCAGGCATCGGGGGAGGCGACA | + |
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Preference number: 5 (lower is better) Translates to: DVILGTSNSISSSIE*RAMIPALQASGEAT Trigger: TGTCGCCTCCCCCGATGCCTGCAGGGCAGGTATCATTGCCCTGCATTCTATTGAGGAGGAAATTGAGTTGGAAGTGCCCAAGATCACGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CCA 90 bp | ATCCTTCCATTTCACAGCCTCAGTTCCTCTCTGGTGGGGCCTCCTTaGGTCCCCATGAAGAGACTGCTCTCCACGAACCTTTCCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: ILPFHSLSSSLVGPP*VPMKRLLSTNLSFS Trigger: AGAGAAGGAAAGGTTCGTGGAGAGCAGTCTCTTCATGGGGACCCAAGGAGGCCCCACCAGAGAGGAACTGAGGCTGTGAAATGGAAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 90 bp | AGGCATCGGGGGAGGCGACATGGTGTGTGTAACGTTCCTCCACATTaGTCAGCAAATGGCGAGATCTCTATAAACCCTGTGGTCATCGTG | + |
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Preference number: 5 (lower is better) Translates to: RHRGRRHGVCNVPPH*SANGEISINPVVIV Trigger: CACGATGACCACAGGGTTTATAGAGATCTCGCCATTTGCTGAGCAATGTGGAGGAACGTTACACACACCATGTCGCCTCCCCCGATGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS TCA 90 bp | AGTGACACCTGTGTAGCCCTTCCTCTGCCTGAGTCACACCTGTTCTaGAGCTACAAAATTAGGTGTGTAGATGAGGAAGCAGAGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: SDTCVALPLPESHLF*SYKIRCVDEEAERQ Trigger: CTGCCTCTCTGCTTCCTCATCTACACACCTAATTTTGTAGCTTCAGAACAGGTGTGACTCAGGCAGAGGAAGGGCTACACAGGTGTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CCA 72 bp | GTCTCCCTGGGTGCCCCCAAGGTCCTGGCCGCTGTTTaGGAGCCAGTCCCCCGGCCTTCCTGCGTGGATACG | + |
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Preference number: 6 (lower is better) Translates to: VSLGAPKVLAAV*EPVPRPSCVDT Trigger: CGTATCCACGCAGGAAGGCCGGGGGACTGGCTCCCAAACAGCGGCCAGGACCTTGGGGGCACCCAGGGAGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS TCA 72 bp | TTCCCAGGGCTCGTCCCAGACCTGGATCCAAAGCCCTaGGGTGCAGGGCCCCAGTCTCCCTGGGTGCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: FPGLVPDLDPKP*GAGPQSPWVPP Trigger: TGGGGGCACCCAGGGAGACTGGGGCCCTGCACCTCAGGGCTTTGGATCCAGGTCTGGGACGAGCCCTGGGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 72 bp | CTGGCCGCTGTTTGGGAGCCAGTCCCCCGGCCTTCCTaGGTGGATACGGGAATGCTCAGCCTTGAGCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: LAAVWEPVPRPS*VDTGMLSLEPG Trigger: CCCCGGCTCAAGGCTGAGCATTCCCGTATCCACGCAGGAAGGCCGGGGGACTGGCTCCCAAACAGCGGCCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 72 bp | AGGGCTCGTCCCAGACCTGGATCCAAAGCCCTGAGGTaGAGGGCCCCAGTCTCCCTGGGTGCCCCCAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: RARPRPGSKALR*RAPVSLGAPKV Trigger: GACCTTGGGGGCACCCAGGGAGACTGGGGCCCTGCACCTCAGGGCTTTGGATCCAGGTCTGGGACGAGCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 72 bp | CGTCCATCCCCGCGGAGCTGGTGGCAGAGTGGCGGATaGCGTGGTGGAGCACTGCATGGAGCACTGACGGAT | + |
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Preference number: 6 (lower is better) Translates to: RPSPRSWWQSGG*RGGALHGALTD Trigger: ATCCGTCAGTGCTCCATGCAGTGCTCCACCACGGCATCCGCCACTCTGCCACCAGCTCCGCGGGGATGGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 72 bp | ATGAAGCCAGAGGCAGGTGGCTCCAGGGCCGGCGAGTaGAGCAGGTCCGGGATGTCACCCAGGACGCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: MKPEAGGSRAGE*SRSGMSPRTQV Trigger: AACCTGCGTCCTGGGTGACATCCCGGACCTGCTGCACTCGCCGGCCCTGGAGCCACCTGCCTCTGGCTTCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 72 bp | CTTCTCTCCCACGGTGCCCAGCAAGCCTTCGTTACCTaGCCACTCTGTCCCTGGCCCTGTGCCTGGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LLSHGAQQAFVT*PLCPWPCAWPQ Trigger: CTGGGGCCAGGCACAGGGCCAGGGACAGAGTGGGCAGGTAACGAAGGCTTGCTGGGCACCGTGGGAGAGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CCA 72 bp | ATCACCCTCCTCATGCCCGTGGCCACCATGCATGGGTaGGGGCCGGGTCCCACCGGGAAGTCTGTCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: ITLLMPVATMHG*GPGPTGKSVCS Trigger: GCTACAGACAGACTTCCCGGTGGGACCCGGCCCCCACCCATGCATGGTGGCCACGGGCATGAGGAGGGTGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CAA 90 bp | AGCCAGTCCCCCGGCCTTCCTGCGTGGATACGGGAATGCTCAGCCTaGAGCCGGGGGCACATCAGAGGAGCAGTGAGGGCAGCACGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SQSPGLPAWIRECSA*SRGHIRGAVRAARP Trigger: AGGACGTGCTGCCCTCACTGCTCCTCTGATGTGCCCCCGGCTCAAGGCTGAGCATTCCCGTATCCACGCAGGAAGGCCGGGGGACTGGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 72 bp | AGCCAGTCCCCCGGCCTTCCTGCGTGGATACGGGAATaGTCAGCCTTGAGCCGGGGGCACATCAGAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: SQSPGLPAWIRE*SALSRGHIRGA Trigger: TGCTCCTCTGATGTGCCCCCGGCTCAAGGCTGAGCATTCCCGTATCCACGCAGGAAGGCCGGGGGACTGGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CAA 72 bp | CCCGGCCTTCCTGCGTGGATACGGGAATGCTCAGCCTaGAGCCGGGGGCACATCAGAGGAGCAGTGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: PGLPAWIRECSA*SRGHIRGAVRA Trigger: TGCCCTCACTGCTCCTCTGATGTGCCCCCGGCTCAAGGCTGAGCATTCCCGTATCCACGCAGGAAGGCCGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 72 bp | TCATCGTGGCTCCCCTTGTCATTATCACCCTCCTCATaGCCGTGGCCACCATGCATGGGTGGGGGCCGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSWLPLSLSPSS*PWPPCMGGGRV Trigger: GACCCGGCCCCCACCCATGCATGGTGGCCACGGGCATGAGGAGGGTGATAATGACAAGGGGAGCCACGATGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CCA 72 bp | TGCTCCCATGCTGATTCCCAGGGCTCGTCCCAGACCTaGATCCAAAGCCCTGAGGTGCAGGGCCCCAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: CSHADSQGSSQT*IQSPEVQGPSL Trigger: GAGACTGGGGCCCTGCACCTCAGGGCTTTGGATCCAGGTCTGGGACGAGCCCTGGGAATCAGCATGGGAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS TCA 72 bp | GTGGCGGATGCCGTGGTGGAGCACTGCATGGAGCACTaGCGGATGACACGTGCACATGGCGATGAGGACGAC | + |
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Preference number: 6 (lower is better) Translates to: VADAVVEHCMEH*RMTRAHGDEDD Trigger: GTCGTCCTCATCGCCATGTGCACGTGTCATCCGTCAGTGCTCCATGCAGTGCTCCACCACGGCATCCGCCAC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS TCA 72 bp | CTCAGGGCCACAGGATGGCTGCCACTGCTCCCATGCTaGTTCCCAGGGCTCGTCCCAGACCTGGATCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: LRATGWLPLLPC*FPGLVPDLDPK Trigger: CTTTGGATCCAGGTCTGGGACGAGCCCTGGGAATCAGCATGGGAGCAGTGGCAGCCATCCTGTGGCCCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 72 bp | GCAGTGAGGGCAGCACGTCCTGGAGTGAGCAGAGGCTaGAGACAGGGCTTCCACGCAGACCGTTTGCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: AVRAARPGVSRG*RQGFHADRLPV Trigger: AACAGGCAAACGGTCTGCGTGGAAGCCCTGTCTGCAGCCTCTGCTCACTCCAGGACGTGCTGCCCTCACTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CCA 72 bp | GGAGCTCAGAGCCATCAGAAGACTGCCCTGCAGGGGTaGGGTGGCTACCACTTACTGCTTCCGGCTGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: GAQSHQKTALQG*GGYHLLLPAAR Trigger: CCTTGCAGCCGGAAGCAGTAAGTGGTAGCCACCCCACCCCTGCAGGGCAGTCTTCTGATGGCTCTGAGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CAA 90 bp | GCAGGTTCCTTCTGTGTTTCCTCCTGCTGCCCTCAGCATTTCAGGTaGTCCTCCAGCCAGCTCCCCTCAGGGCCACAGGATGGCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: AGSFCVSSCCPQHFR*SSSQLPSGPQDGCH Trigger: GTGGCAGCCATCCTGTGGCCCTGAGGGGAGCTGGCTGGAGGACAACCTGAAATGCTGAGGGCAGCAGGAGGAAACACAGAAGGAACCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CAA 72 bp | ATAGGCATGGGGATGGTTCCGTCTGCTCGGGCTCACTaGTCCACTGGCCTGGATCCCTCAGGCCTCCATCCT | + |
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Preference number: 6 (lower is better) Translates to: IGMGMVPSARAH*STGLDPSGLHP Trigger: AGGATGGAGGCCTGAGGGATCCAGGCCAGTGGACAAGTGAGCCCGAGCAGACGGAACCATCCCCATGCCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS TCA 72 bp | ATGCCGTGGTGGAGCACTGCATGGAGCACTGACGGATaGCACGTGCACATGGCGATGAGGACGACACCTCCT | + |
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Preference number: 6 (lower is better) Translates to: MPWWSTAWSTDG*HVHMAMRTTPP Trigger: AGGAGGTGTCGTCCTCATCGCCATGTGCACGTGTCATCCGTCAGTGCTCCATGCAGTGCTCCACCACGGCAT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 72 bp | CTGCCTGGGGTAAACCCTATGTGTTCGAACACCTGCTaGTCCACTGGGCCCTCAGAGTGGAGCACAGACCCT | + |
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Preference number: 6 (lower is better) Translates to: LPGVNPMCSNTC*STGPSEWSTDP Trigger: AGGGTCTGTGCTCCACTCTGAGGGCCCAGTGGAGCAGCAGGTGTTCGAACACATAGGGTTTACCCCAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 72 bp | AGGAGACAACCAGATAGGCATGGGGATGGTTCCGTCTaGTCGGGCTCACTTGTCCACTGGCCTGGATCCCTC | + |
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Preference number: 6 (lower is better) Translates to: RRQPDRHGDGSV*SGSLVHWPGSL Trigger: GAGGGATCCAGGCCAGTGGACAAGTGAGCCCGAGCAGACGGAACCATCCCCATGCCTATCTGGTTGTCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 72 bp | ACCCAGGACGCAGGTTCCTTCTGTGTTTCCTCCTGCTaGCCTCAGCATTTCAGGTTGTCCTCCAGCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: TQDAGSFCVSSC*PQHFRLSSSQL Trigger: GAGCTGGCTGGAGGACAACCTGAAATGCTGAGGGCAGCAGGAGGAAACACAGAAGGAACCTGCGTCCTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 72 bp | TTTCTGCCTGGGGTAAACCCTATGTGTTCGAACACCTaGTGCTCCACTGGGCCCTCAGAGTGGAGCACAGAC | + |
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Preference number: 6 (lower is better) Translates to: FLPGVNPMCSNT*CSTGPSEWSTD Trigger: GTCTGTGCTCCACTCTGAGGGCCCAGTGGAGCAGCAGGTGTTCGAACACATAGGGTTTACCCCAGGCAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CAA 90 bp | CATCCTTCCATTTCACAGCCTCAGTTCCTCTCTGGTGGGGCCTCCTaGGGTCCCCATGAAGAGACTGCTCTCCACGAACCTTTCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: HPSISQPQFLSGGAS*GPHEETALHEPFLL Trigger: GAGAAGGAAAGGTTCGTGGAGAGCAGTCTCTTCATGGGGACCCAAGGAGGCCCCACCAGAGAGGAACTGAGGCTGTGAAATGGAAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS TCA 72 bp | CCAGAGAGCTCACTCTGCCTGGGTCTCATGCCCTTATaGGGGTGGTTTCTGCCTGGGGTAAACCCTATGTGT | + |
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Preference number: 6 (lower is better) Translates to: PESSLCLGLMPL*GWFLPGVNPMC Trigger: ACACATAGGGTTTACCCCAGGCAGAAACCACCCTCATAAGGGCATGAGACCCAGGCAGAGTGAGCTCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CCA 72 bp | CCTGGGTCTCATGCCCTTATGAGGGTGGTTTCTGCCTaGGGTAAACCCTATGTGTTCGAACACCTGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: PGSHALMRVVSA*GKPYVFEHLLL Trigger: GAGCAGCAGGTGTTCGAACACATAGGGTTTACCCCAGGCAGAAACCACCCTCATAAGGGCATGAGACCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 72 bp | AATTTCCTCCTCAATAGAATGCAGGGCAATGATACCTaGCCTGCAGGCATCGGGGGAGGCGACATGGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: NFLLNRMQGNDT*PAGIGGGDMVC Trigger: ACACACCATGTCGCCTCCCCCGATGCCTGCAGGGCAGGTATCATTGCCCTGCATTCTATTGAGGAGGAAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CAA 72 bp | GGACGACACCTCCTTCCTGCCGTGCCCTTAGTTAACTaGTCCGAGGCTTGGATTTCTTTCTTCTGCCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: GRHLLPAVPLVN*SEAWISFFCLP Trigger: AGGGAGGCAGAAGAAAGAAATCCAAGCCTCGGACAAGTTAACTAAGGGCACGGCAGGAAGGAGGTGTCGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 72 bp | TTAGTTAACTTGTCCGAGGCTTGGATTTCTTTCTTCTaGCTCCCTCAGAAGCCTGGGCTGCACAGCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LVNLSEAWISFF*LPQKPGLHSLG Trigger: GCCCAAGCTGTGCAGCCCAGGCTTCTGAGGGAGGCAGAAGAAAGAAATCCAAGCCTCGGACAAGTTAACTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS GCA 72 bp | GGGAGGCGACATGGTGTGTGTAACGTTCCTCCACATTaGTCAGCAAATGGCGAGATCTCTATAAACCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GRRHGVCNVPPH*SANGEISINPV Trigger: CACAGGGTTTATAGAGATCTCGCCATTTGCTGAGCAATGTGGAGGAACGTTACACACACCATGTCGCCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CAA 90 bp | CCTGGAGTGAGCAGAGGCTGCAGACAGGGCTTCCACGCAGACCGTTaGCCTGTTACCAAATTTGAGGACAAAGGTTTCTTTCTTTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PGVSRGCRQGFHADR*PVTKFEDKGFFLLK Trigger: CTTCAAAAGAAAGAAACCTTTGTCCTCAAATTTGGTAACAGGCAAACGGTCTGCGTGGAAGCCCTGTCTGCAGCCTCTGCTCACTCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CAA 72 bp | AGCAGAGGCTGCAGACAGGGCTTCCACGCAGACCGTTaGCCTGTTACCAAATTTGAGGACAAAGGTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SRGCRQGFHADR*PVTKFEDKGFF Trigger: AAAGAAACCTTTGTCCTCAAATTTGGTAACAGGCAAACGGTCTGCGTGGAAGCCCTGTCTGCAGCCTCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS TCA 72 bp | ACAACTAAATTCAGCTGGAGGTTTGTCCTCTCAGTCTaGGCCATGTGCTCATTTCAGAGTGTGGGGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: TTKFSWRFVLSV*AMCSFQSVGKE Trigger: CTCCTTCCCCACACTCTGAAATGAGCACATGGCTCAGACTGAGAGGACAAACCTCCAGCTGAATTTAGTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS CAA 72 bp | GGGGAACCACAGCTACAACTAAATTCAGCTGGAGGTTaGTCCTCTCAGTCTGAGCCATGTGCTCATTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: GEPQLQLNSAGG*SSQSEPCAHFR Trigger: TCTGAAATGAGCACATGGCTCAGACTGAGAGGACAAACCTCCAGCTGAATTTAGTTGTAGCTGTGGTTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS TCA 72 bp | TGTGTAGCCCTTCCTCTGCCTGAGTCACACCTGTTCTaGAGCTACAAAATTAGGTGTGTAGATGAGGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: CVALPLPESHLF*SYKIRCVDEEA Trigger: TGCTTCCTCATCTACACACCTAATTTTGTAGCTTCAGAACAGGTGTGACTCAGGCAGAGGAAGGGCTACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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| CDS TCA 72 bp | AAGGGCTTGTTTAGGCCCTGCCATTTATTAACGACGTaGTCTTGGGCACTTCCAACTCAATTTCCTCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: KGLFRPCHLLTT*SWALPTQFPPQ Trigger: TTGAGGAGGAAATTGAGTTGGAAGTGCCCAAGATCACGTCGTTAATAAATGGCAGGGCCTAAACAAGCCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000418006.1 ENST00000643739.1 |
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