Pregenerated sensors for LINC00937 (Homo sapiens)

Ensembl gene IDs: ENSG00000226091

Ensembl transcript IDs: ENST00000538304.1, ENST00000544461.1

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GGATGGAGACCAGGGATGGTGCTAGCCATCCTACAATACACAGGATaGCCCCACCACCACCATGAATGGTCTCACCCCAAGTGTTGTGAC	+
Preference number: 5 (lower is better) Translates to: GWRPGMVLAILQYTG*PHHHHEWSHPKCCD Trigger: GTCACAACACTTGGGGTGAGACCATTCATGGTGGTGGTGGGGGCATCCTGTGTATTGTAGGATGGCTAGCACCATCCCTGGTCTCCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538304.1
CDS CCA 90 bp	AGAGAACATGTGGCCATGTCTGGAGACAATTTTGGTGGTTGCGGCTaGAGGAGGTGGTGCTACTGGCAGCTAATGGGTAGAGGCCAGCGA	+
Preference number: 5 (lower is better) Translates to: REHVAMSGDNFGGCG*RRWCYWQLMGRGQR Trigger: TCGCTGGCCTCTACCCATTAGCTGCCAGTAGCACCACCTCCTCCAGCCGCAACCACCAAAATTGTCTCCAGACATGGCCACATGTTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544461.1
CDS CCA 90 bp	ATCTGGGGTAGCCACAGCTGGGAGGATAGAATGGCACCTAGAGGATaGAGACCAGGGATGGTGCTAGCCATCCTACAATACACAGGATGC	+
Preference number: 5 (lower is better) Translates to: IWGSHSWEDRMAPRG*RPGMVLAILQYTGC Trigger: GCATCCTGTGTATTGTAGGATGGCTAGCACCATCCCTGGTCTCCATCCTCTAGGTGCCATTCTATCCTCCCAGCTGTGGCTACCCCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000538304.1
CDS GCA 72 bp	CCAGGGATGGTGCTAGCCATCCTACAATACACAGGATaGCCCCACCACCACCATGAATGGTCTCACCCCAAG	+
Preference number: 6 (lower is better) Translates to: PGMVLAILQYTG*PHHHHEWSHPK Trigger: CTTGGGGTGAGACCATTCATGGTGGTGGTGGGGGCATCCTGTGTATTGTAGGATGGCTAGCACCATCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000538304.1
CDS CCA 72 bp	CCCCAGAGAACATGTGGCCATGTCTGGAGACAATTTTaGTGGTTGCGGCTGGAGGAGGTGGTGCTACTGGCA	+
Preference number: 6 (lower is better) Translates to: PQRTCGHVWRQF*WLRLEEVVLLA Trigger: TGCCAGTAGCACCACCTCCTCCAGCCGCAACCACCAAAATTGTCTCCAGACATGGCCACATGTTCTCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000544461.1
CDS CCA 72 bp	CAGAGAACATGTGGCCATGTCTGGAGACAATTTTGGTaGTTGCGGCTGGAGGAGGTGGTGCTACTGGCAGCT	+
Preference number: 6 (lower is better) Translates to: QRTCGHVWRQFW*LRLEEVVLLAA Trigger: AGCTGCCAGTAGCACCACCTCCTCCAGCCGCAACCACCAAAATTGTCTCCAGACATGGCCACATGTTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544461.1
CDS CCA 72 bp	AGCCACAGCTGGGAGGATAGAATGGCACCTAGAGGATaGAGACCAGGGATGGTGCTAGCCATCCTACAATAC	+
Preference number: 6 (lower is better) Translates to: SHSWEDRMAPRG*RPGMVLAILQY Trigger: GTATTGTAGGATGGCTAGCACCATCCCTGGTCTCCATCCTCTAGGTGCCATTCTATCCTCCCAGCTGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538304.1
CDS CAA 72 bp	GGACTTTGGGTTACGATGACTTACCATTTGTGCAAGTaGTGCATTGCATACCTCCAGGGGGCGCCACCCACA	+
Preference number: 6 (lower is better) Translates to: GLWVTMTYHLCK*CIAYLQGAPPT Trigger: TGTGGGTGGCGCCCCCTGGAGGTATGCAATGCACAACTTGCACAAATGGTAAGTCATCGTAACCCAAAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000544461.1
CDS GCA 72 bp	CTTTGGGTTACGATGACTTACCATTTGTGCAAGTTGTaGATTGCATACCTCCAGGGGGCGCCACCCACATAT	+
Preference number: 6 (lower is better) Translates to: LWVTMTYHLCKL*IAYLQGAPPTY Trigger: ATATGTGGGTGGCGCCCCCTGGAGGTATGCAATGCACAACTTGCACAAATGGTAAGTCATCGTAACCCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000544461.1

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