Pregenerated sensors for LINC00934 (Homo sapiens)
Ensembl gene IDs: ENSG00000281196Ensembl transcript IDs: ENST00000628559.1, ENST00000630357.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCACAGCTGAGCGGAGTCCACAGGCTCAGGATCTCTCACCAGGTTaGAATCAAGGTATTGGCAGGGCTGCAGTCTCAGCTGAAGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: GTAERSPQAQDLSPG*NQGIGRAAVSAEGL Trigger: CAAACCTTCAGCTGAGACTGCAGCCCTGCCAATACCTTGATTGCAACCTGGTGAGAGATCCTGAGCCTGTGGACTCCGCTCAGCTGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS GCA 90 bp | CACCAATGCCAAACTGTGACACTACTGGTCAAGAGAGCCCTTATCTaGCCTCACCTCTCCTCCCTCTGCTCCCTTGGGCCTTTGGCTAGC | + |
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Preference number: 5 (lower is better) Translates to: HQCQTVTLLVKRALI*PHLSSLCSLGPLAS Trigger: GCTAGCCAAAGGCCCAAGGGAGCAGAGGGAGGAGAGGTGAGGGCAGATAAGGGCTCTCTTGACCAGTAGTGTCACAGTTTGGCATTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS TCA 90 bp | ACAAGAAGGGAACTGAAGAATCCCCACCTGAACACAGTTCTCAGGTaGACAATTGGGGGACTGTGCAGCGTGGACGCCACTAACAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: TRRELKNPHLNTVLR*TIGGLCSVDATNRD Trigger: GTCCCTGTTAGTGGCGTCCACGCTGCACAGTCCCCCAATTGTTCACCTGAGAACTGTGTTCAGGTGGGGATTCTTCAGTTCCCTTCTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000628559.1 ENST00000630357.1 |
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| CDS TCA 90 bp | AAGTTAGTCTCAGTCCCCTTGGAAGAGGAGAGAGGCAATGACTCCTaGCCACAGCCTTGCCTGGTGAGAGGAACTTACAGGAAATATCTC | + |
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Preference number: 5 (lower is better) Translates to: KLVSVPLEEERGNDS*PQPCLVRGTYRKYL Trigger: GAGATATTTCCTGTAAGTTCCTCTCACCAGGCAAGGCTGTGGTCAGGAGTCATTGCCTCTCTCCTCTTCCAAGGGGACTGAGACTAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000628559.1 ENST00000630357.1 |
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| CDS TCA 90 bp | GGCTCTGCTAATCTTGGTGGGGCTTTCTCACACATCTGGGACAACTaGGCTGATTCTGCTCTTATTCACATAGTCTGTCATTCCGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: GSANLGGAFSHIWDN*ADSALIHIVCHSAH Trigger: GTGGGCGGAATGACAGACTATGTGAATAAGAGCAGAATCAGCTCAGTTGTCCCAGATGTGTGAGAAAGCCCCACCAAGATTAGCAGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS TCA 90 bp | GGTATTGGCAGGGCTGCAGTCTCAGCTGAAGGTTTGAACGGGGAATaGTCCTCTTCCAAGCTCATGAGTGTGGTTTTTGGAAACATTCAA | + |
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Preference number: 5 (lower is better) Translates to: GIGRAAVSAEGLNGE*SSSKLMSVVFGNIQ Trigger: TTGAATGTTTCCAAAAACCACACTCATGAGCTTGGAAGAGGATCATTCCCCGTTCAAACCTTCAGCTGAGACTGCAGCCCTGCCAATACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS GCA 90 bp | ACAGCCTTGCCTGGTGAGAGGAACTTACAGGAAATATCTCTAGTTTaGTGTGAATTCCCTGAAGTCTGGGGAGACTGGCATCTGATTGAG | + |
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Preference number: 5 (lower is better) Translates to: TALPGERNLQEISLV*CEFPEVWGDWHLIE Trigger: CTCAATCAGATGCCAGTCTCCCCAGACTTCAGGGAATTCACAGCAAACTAGAGATATTTCCTGTAAGTTCCTCTCACCAGGCAAGGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000628559.1 ENST00000630357.1 |
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| CDS CCA 90 bp | CTTCAACCCTTGATGAGAGGGGCTAACAAGCCATGGCAAAGAGTGTaGATACCATTGATGAGGTCCATCAGTGCAGTAAATCTCCCACAA | + |
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Preference number: 5 (lower is better) Translates to: LQPLMRGANKPWQRV*IPLMRSISAVNLPQ Trigger: TTGTGGGAGATTTACTGCACTGATGGACCTCATCAATGGTATCCACACTCTTTGCCATGGCTTGTTAGCCCCTCTCATCAAGGGTTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS CCA 90 bp | TTGGGAAATAGACTTCAACCCTTGATGAGAGGGGCTAACAAGCCATaGCAAAGAGTGTGGATACCATTGATGAGGTCCATCAGTGCAGTA | + |
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Preference number: 5 (lower is better) Translates to: LGNRLQPLMRGANKP*QRVWIPLMRSISAV Trigger: TACTGCACTGATGGACCTCATCAATGGTATCCACACTCTTTGCCATGGCTTGTTAGCCCCTCTCATCAAGGGTTGAAGTCTATTTCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS TCA 90 bp | TATAGATTAGTCAGACCATGGCTGGAGTCTATCAAGATCTCAGGATaGGGATTGAGGATAGCACTAGAAGCAGGACTTACCCTGATCCAG | + |
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Preference number: 5 (lower is better) Translates to: YRLVRPWLESIKISG*GLRIALEAGLTLIQ Trigger: CTGGATCAGGGTAAGTCCTGCTTCTAGTGCTATCCTCAATCCTCATCCTGAGATCTTGATAGACTCCAGCCATGGTCTGACTAATCTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628559.1 |
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| CDS GCA 90 bp | TTTTTGGAAACATTCAATCACTCCAGGGCTGTTGGCCAGTGGTCATaGTCTCAGTTCCTTAATATGTGGGTCTCTCCACAGAGTAACTCA | + |
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Preference number: 5 (lower is better) Translates to: FLETFNHSRAVGQWS*SQFLNMWVSPQSNS Trigger: TGAGTTACTCTGTGGAGAGACCCACATATTAAGGAACTGAGAGCATGACCACTGGCCAACAGCCCTGGAGTGATTGAATGTTTCCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS TCA 90 bp | TTTGGGTATTGGTTTCAGTTGAGGCTCCATGGGCCAAAAACAAAATaGAATGTTCAAATACCTGACATTTCCAACCTTGCAAAGGGTCTA | + |
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Preference number: 5 (lower is better) Translates to: FGYWFQLRLHGPKTK*NVQIPDISNLAKGL Trigger: TAGACCCTTTGCAAGGTTGGAAATGTCAGGTATTTGAACATTTCATTTTGTTTTTGGCCCATGGAGCCTCAACTGAAACCAATACCCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000628559.1 ENST00000630357.1 |
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| CDS TCA 72 bp | CTGACAGTTTCTGTGGGTCAGGAATCCAGGCACAGCTaGGCGGAGTCCACAGGCTCAGGATCTCTCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: LTVSVGQESRHS*AESTGSGSLTR Trigger: CCTGGTGAGAGATCCTGAGCCTGTGGACTCCGCTCAGCTGTGCCTGGATTCCTGACCCACAGAAACTGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS GCA 72 bp | GAGCGGAGTCCACAGGCTCAGGATCTCTCACCAGGTTaGAATCAAGGTATTGGCAGGGCTGCAGTCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: ERSPQAQDLSPG*NQGIGRAAVSA Trigger: AGCTGAGACTGCAGCCCTGCCAATACCTTGATTGCAACCTGGTGAGAGATCCTGAGCCTGTGGACTCCGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS TCA 72 bp | TCAGTCCCCTTGGAAGAGGAGAGAGGCAATGACTCCTaGCCACAGCCTTGCCTGGTGAGAGGAACTTACAGG | + |
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Preference number: 6 (lower is better) Translates to: SVPLEEERGNDS*PQPCLVRGTYR Trigger: CCTGTAAGTTCCTCTCACCAGGCAAGGCTGTGGTCAGGAGTCATTGCCTCTCTCCTCTTCCAAGGGGACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000628559.1 ENST00000630357.1 |
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| CDS TCA 72 bp | GAACTGAAGAATCCCCACCTGAACACAGTTCTCAGGTaGACAATTGGGGGACTGTGCAGCGTGGACGCCACT | + |
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Preference number: 6 (lower is better) Translates to: ELKNPHLNTVLR*TIGGLCSVDAT Trigger: AGTGGCGTCCACGCTGCACAGTCCCCCAATTGTTCACCTGAGAACTGTGTTCAGGTGGGGATTCTTCAGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000628559.1 ENST00000630357.1 |
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| CDS TCA 72 bp | AATACCTGCCAGGCAGAGAGCACCAATGCCAAACTGTaGCACTACTGGTCAAGAGAGCCCTTATCTGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: NTCQAESTNAKL*HYWSREPLSAL Trigger: GAGGGCAGATAAGGGCTCTCTTGACCAGTAGTGTCACAGTTTGGCATTGGTGCTCTCTGCCTGGCAGGTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS CCA 72 bp | CAGTTCTCAGGTGAACAATTGGGGGACTGTGCAGCGTaGACGCCACTAACAGGGACCTCAAAGAATCCACAA | + |
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Preference number: 6 (lower is better) Translates to: QFSGEQLGDCAA*TPLTGTSKNPQ Trigger: TTGTGGATTCTTTGAGGTCCCTGTTAGTGGCGTCCACGCTGCACAGTCCCCCAATTGTTCACCTGAGAACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000628559.1 ENST00000630357.1 |
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| CDS CCA 72 bp | CTAGTTTGCTGTGAATTCCCTGAAGTCTGGGGAGACTaGCATCTGATTGAGACCCTGATCCAGGTGCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: LVCCEFPEVWGD*HLIETLIQVPR Trigger: CCTTGGCACCTGGATCAGGGTCTCAATCAGATGCCAGTCTCCCCAGACTTCAGGGAATTCACAGCAAACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS TCA 72 bp | AGCAGGACTTACCCTGATCCAGGTGCCAAGGATGCATaGGCTTCCCATGAGTCAAGCAGATGTGCAGAAACT | + |
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Preference number: 6 (lower is better) Translates to: SRTYPDPGAKDA*ASHESSRCAET Trigger: AGTTTCTGCACATCTGCTTGACTCATGGGAAGCTCATGCATCCTTGGCACCTGGATCAGGGTAAGTCCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628559.1 |
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| CDS TCA 72 bp | AGGGCTGCAGTCTCAGCTGAAGGTTTGAACGGGGAATaGTCCTCTTCCAAGCTCATGAGTGTGGTTTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: RAAVSAEGLNGE*SSSKLMSVVFG Trigger: TCCAAAAACCACACTCATGAGCTTGGAAGAGGATCATTCCCCGTTCAAACCTTCAGCTGAGACTGCAGCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS TCA 72 bp | TTGCAATCAAGGTATTGGCAGGGCTGCAGTCTCAGCTaGAGGTTTGAACGGGGAATGATCCTCTTCCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: LQSRYWQGCSLS*RFERGMILFQA Trigger: AGCTTGGAAGAGGATCATTCCCCGTTCAAACCTTCAGCTGAGACTGCAGCCCTGCCAATACCTTGATTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS GCA 72 bp | ACATTCAATCACTCCAGGGCTGTTGGCCAGTGGTCATaGTCTCAGTTCCTTAATATGTGGGTCTCTCCACAG | + |
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Preference number: 6 (lower is better) Translates to: TFNHSRAVGQWS*SQFLNMWVSPQ Trigger: CTGTGGAGAGACCCACATATTAAGGAACTGAGAGCATGACCACTGGCCAACAGCCCTGGAGTGATTGAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS CCA 72 bp | GTTGGCCAGTGGTCATGCTCTCAGTTCCTTAATATGTaGGTCTCTCCACAGAGTAACTCACAACAAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: VGQWSCSQFLNM*VSPQSNSQQGS Trigger: GCTGCCTTGTTGTGAGTTACTCTGTGGAGAGACCCACATATTAAGGAACTGAGAGCATGACCACTGGCCAAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS TCA 72 bp | TGGTGGGGCTTTCTCACACATCTGGGACAACTGAGCTaGTTCTGCTCTTATTCACATAGTCTGTCATTCCGC | + |
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Preference number: 6 (lower is better) Translates to: WWGFLTHLGQLS*FCSYSHSLSFR Trigger: GCGGAATGACAGACTATGTGAATAAGAGCAGAATCAGCTCAGTTGTCCCAGATGTGTGAGAAAGCCCCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS TCA 72 bp | GTCAGACCATGGCTGGAGTCTATCAAGATCTCAGGATaGGGATTGAGGATAGCACTAGAAGCAGGACTTACC | + |
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Preference number: 6 (lower is better) Translates to: VRPWLESIKISG*GLRIALEAGLT Trigger: GGTAAGTCCTGCTTCTAGTGCTATCCTCAATCCTCATCCTGAGATCTTGATAGACTCCAGCCATGGTCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628559.1 |
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| CDS CCA 72 bp | CTTCCCATGAGTCAAGCAGATGTGCAGAAACTGGAATaGAGGTGTCTTAGAAGCATCCCACCTGAAAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LPMSQADVQKLE*RCLRSIPPERS Trigger: ACTCCTTTCAGGTGGGATGCTTCTAAGACACCTCCATTCCAGTTTCTGCACATCTGCTTGACTCATGGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000628559.1 ENST00000630357.1 |
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| CDS CAA 72 bp | GGGGCTAACAAGCCATGGCAAAGAGTGTGGATACCATaGATGAGGTCCATCAGTGCAGTAAATCTCCCACAA | + |
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Preference number: 6 (lower is better) Translates to: GANKPWQRVWIP*MRSISAVNLPQ Trigger: TTGTGGGAGATTTACTGCACTGATGGACCTCATCAATGGTATCCACACTCTTTGCCATGGCTTGTTAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS CAA 72 bp | GCCCAAATCCAAGGATTGGGAAATAGACTTCAACCCTaGATGAGAGGGGCTAACAAGCCATGGCAAAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: AQIQGLGNRLQP*MRGANKPWQRV Trigger: CACTCTTTGCCATGGCTTGTTAGCCCCTCTCATCAAGGGTTGAAGTCTATTTCCCAATCCTTGGATTTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS CAA 90 bp | GCTCATGAGTGTGGTTTTTGGAAACATTCAATCACTCCAGGGCTGTaGGCCAGTGGTCATGCTCTCAGTTCCTTAATATGTGGGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: AHECGFWKHSITPGL*ASGHALSSLICGSL Trigger: GAGAGACCCACATATTAAGGAACTGAGAGCATGACCACTGGCCAACAGCCCTGGAGTGATTGAATGTTTCCAAAAACCACACTCATGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS TCA 72 bp | CCTGAAGTCTGGGGAGACTGGCATCTGATTGAGACCTaGAAAATGTATAGATTAGTCAGACCATGGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: PEVWGDWHLIET*KMYRLVRPWLE Trigger: CTCCAGCCATGGTCTGACTAATCTATACATTTTTCAGGTCTCAATCAGATGCCAGTCTCCCCAGACTTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628559.1 |
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| CDS GCA 72 bp | CCTGGTGAGAGGAACTTACAGGAAATATCTCTAGTTTaGTGTGAATTCCCTGAAGTCTGGGGAGACTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: PGERNLQEISLV*CEFPEVWGDWH Trigger: ATGCCAGTCTCCCCAGACTTCAGGGAATTCACAGCAAACTAGAGATATTTCCTGTAAGTTCCTCTCACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000628559.1 ENST00000630357.1 |
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| CDS CCA 72 bp | GGAATGATCCTCTTCCAAGCTCATGAGTGTGGTTTTTaGAAACATTCAATCACTCCAGGGCTGTTGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: GMILFQAHECGF*KHSITPGLLAS Trigger: ACTGGCCAACAGCCCTGGAGTGATTGAATGTTTCCAAAAACCACACTCATGAGCTTGGAAGAGGATCATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS CAA 90 bp | TTGATGAGAGGGGCTAACAAGCCATGGCAAAGAGTGTGGATACCATaGATGAGGTCCATCAGTGCAGTAAATCTCCCACAACAACGTAAA | + |
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Preference number: 6 (lower is better) Translates to: LMRGANKPWQRVWIP*MRSISAVNLPQQRK Trigger: TTTACGTTGTTGTGGGAGATTTACTGCACTGATGGACCTCATCAATGGTATCCACACTCTTTGCCATGGCTTGTTAGCCCCTCTCATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS CCA 72 bp | TTGATGAGAGGGGCTAACAAGCCATGGCAAAGAGTGTaGATACCATTGATGAGGTCCATCAGTGCAGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: LMRGANKPWQRV*IPLMRSISAVN Trigger: ATTTACTGCACTGATGGACCTCATCAATGGTATCCACACTCTTTGCCATGGCTTGTTAGCCCCTCTCATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS CAA 72 bp | GTCAAAGCAATCACAAGACTAGCCCAAATCCAAGGATaGGGAAATAGACTTCAACCCTTGATGAGAGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: VKAITRLAQIQG*GNRLQPLMRGA Trigger: AGCCCCTCTCATCAAGGGTTGAAGTCTATTTCCCAATCCTTGGATTTGGGCTAGTCTTGTGATTGCTTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS CAA 90 bp | ATTCTGTTGGTCAAAGCAATCACAAGACTAGCCCAAATCCAAGGATaGGGAAATAGACTTCAACCCTTGATGAGAGGGGCTAACAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: ILLVKAITRLAQIQG*GNRLQPLMRGANKP Trigger: TGGCTTGTTAGCCCCTCTCATCAAGGGTTGAAGTCTATTTCCCAATCCTTGGATTTGGGCTAGTCTTGTGATTGCTTTGACCAACAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS TCA 72 bp | CAAAGAATTGACTCAGCTTTGATCACTTGCCAAACCTaGAGGAAGTTTAAATACCTGCCAGGCAGAGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: QRIDSALITCQT*RKFKYLPGREH Trigger: GTGCTCTCTGCCTGGCAGGTATTTAAACTTCCTTCAGGTTTGGCAAGTGATCAAAGCTGAGTCAATTCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000628559.1 ENST00000630357.1 |
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| CDS TCA 72 bp | AATCTTGGTGGGGCTTTCTCACACATCTGGGACAACTaGGCTGATTCTGCTCTTATTCACATAGTCTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: NLGGAFSHIWDN*ADSALIHIVCH Trigger: ATGACAGACTATGTGAATAAGAGCAGAATCAGCTCAGTTGTCCCAGATGTGTGAGAAAGCCCCACCAAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630357.1 |
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| CDS TCA 72 bp | GGGACCTCAAAGAATCCACAATACACCTCAAAGAATTaGCTCAGCTTTGATCACTTGCCAAACCTGAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: GTSKNPQYTSKN*LSFDHLPNLKE Trigger: TTCCTTCAGGTTTGGCAAGTGATCAAAGCTGAGTCAATTCTTTGAGGTGTATTGTGGATTCTTTGAGGTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000628559.1 ENST00000630357.1 |
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| CDS CCA 72 bp | AATCTCCCACAACAACGTAAAAGTTACAAAGCACCATaGACTGAACAGCAACTGTATGCATATAACAGGATG | + |
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Preference number: 6 (lower is better) Translates to: NLPQQRKSYKAP*TEQQLYAYNRM Trigger: CATCCTGTTATATGCATACAGTTGCTGTTCAGTCCATGGTGCTTTGTAACTTTTACGTTGTTGTGGGAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000628559.1 ENST00000630357.1 |
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