Pregenerated sensors for LINC00930 (Homo sapiens)
Ensembl gene IDs: ENSG00000258647Ensembl transcript IDs: ENST00000554542.2, ENST00000557075.6, ENST00000653070.1, ENST00000654017.1
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGTCCCAGCAGGAACGAACTGGAAACCTCCTGGGTTTCCAGCAGCTaGTGTGCTTCTGAACTGACTCTTCCTTGGGGGTGGCAGGCGCAC | + |
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Preference number: 5 (lower is better) Translates to: GPSRNELETSWVSSS*CASELTLPWGWQAH Trigger: GTGCGCCTGCCACCCCCAAGGAAGAGTCAGTTCAGAAGCACAGCAGCTGCTGGAAACCCAGGAGGTTTCCAGTTCGTTCCTGCTGGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000554542.2 ENST00000557075.6 ENST00000653070.1 ENST00000654017.1 |
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| CDS CCA 90 bp | TCCTGGGTTTCCAGCAGCTGCTGTGCTTCTGAACTGACTCTTCCTTaGGGGTGGCAGGCGCACTGCCTCCTTGTCTACCGCTGTGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: SWVSSSCCASELTLP*GWQAHCLLVYRCGF Trigger: AAACCCACAGCGGTAGACAAGGAGGCAGTGCGCCTGCCACCCCCAAGGAAGAGTCAGTTCAGAAGCACAGCAGCTGCTGGAAACCCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554542.2 |
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| CDS CCA 90 bp | TCCTGGGTTTCCAGCAGCTGCTGTGCTTCTGAACTGACTCTTCCTTaGGGGTGGCAGGCGCACTGCCTCCTTGTCTACCGCTGGACAGTA | + |
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Preference number: 5 (lower is better) Translates to: SWVSSSCCASELTLP*GWQAHCLLVYRWTV Trigger: TACTGTCCAGCGGTAGACAAGGAGGCAGTGCGCCTGCCACCCCCAAGGAAGAGTCAGTTCAGAAGCACAGCAGCTGCTGGAAACCCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557075.6 ENST00000654017.1 |
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| CDS TCA 90 bp | GCCCCCAGGAATCCTCCCTCCTCATCATGGGTTGCTCGTTGCAAGTaGAAGTCTCGTGCAGTAGGTTCCCTGTGCCTTCTTCTCTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: APRNPPSSSWVARCK*KSRAVGSLCLLLWP Trigger: GGGCCAGAGAAGAAGGCACAGGGAACCTACTGCACGAGACTTTCACTTGCAACGAGCAACCCATGATGAGGAGGGAGGATTCCTGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS TCA 90 bp | AACTGGAAACCTCCTGGGTTTCCAGCAGCTGCTGTGCTTCTGAACTaGCTCTTCCTTGGGGGTGGCAGGCGCACTGCCTCCTTGTCTACC | + |
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Preference number: 5 (lower is better) Translates to: NWKPPGFPAAAVLLN*LFLGGGRRTASLST Trigger: GGTAGACAAGGAGGCAGTGCGCCTGCCACCCCCAAGGAAGAGTCAGTTCAGAAGCACAGCAGCTGCTGGAAACCCAGGAGGTTTCCAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000554542.2 ENST00000557075.6 ENST00000653070.1 ENST00000654017.1 |
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| CDS CCA 90 bp | TCCTGGGTTTCCAGCAGCTGCTGTGCTTCTGAACTGACTCTTCCTTaGGGGTGGCAGGCGCACTGCCTCCTTGTCTACCGCTTGCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: SWVSSSCCASELTLP*GWQAHCLLVYRLLQ Trigger: TTGAAGCAAGCGGTAGACAAGGAGGCAGTGCGCCTGCCACCCCCAAGGAAGAGTCAGTTCAGAAGCACAGCAGCTGCTGGAAACCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653070.1 |
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| CDS GCA 90 bp | ACCGGCATTCCATCTCCTCTGCCTCCCAAGTCACAGAGCCCCAGGTaGCACAATGGCTGTGGAGTCTGCGGTGCAACCTCATTGCAAATA | + |
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Preference number: 5 (lower is better) Translates to: TGIPSPLPPKSQSPR*HNGCGVCGATSLQI Trigger: TATTTGCAATGAGGTTGCACCGCAGACTCCACAGCCATTGTGGCACCTGGGGCTCTGTGACTTGGGAGGCAGAGGAGATGGAATGCCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS GCA 90 bp | TGCTGTGCTTCTGAACTGACTCTTCCTTGGGGGTGGCAGGCGCACTaGCTCCTTGTCTACCGCTGTGGGTTTAGACAAAGTGCATTAGGC | + |
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Preference number: 5 (lower is better) Translates to: CCASELTLPWGWQAH*LLVYRCGFRQSALG Trigger: GCCTAATGCACTTTGTCTAAACCCACAGCGGTAGACAAGGAGGCAGTGCGCCTGCCACCCCCAAGGAAGAGTCAGTTCAGAAGCACAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554542.2 |
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| CDS GCA 90 bp | GTTAGCAGTCTGCAAACTGTGAGAGCCCTCACCAGAACCCGATCATaGAGGCACCCTGATCTCAGACTCACAGCCTCTAGAACTCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: VSSLQTVRALTRTRS*RHPDLRLTASRTLA Trigger: GGCAAGAGTTCTAGAGGCTGTGAGTCTGAGATCAGGGTGCCTGCATGATCGGGTTCTGGTGAGGGCTCTCACAGTTTGCAGACTGCTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557075.6 |
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| CDS CCA 90 bp | TCCTCTGCCTCCCAAGTCACAGAGCCCCAGGTGCCACAATGGCTGTaGAGTCTGCGGTGCAACCTCATTGCAAATATTTGTATGCTCGGA | + |
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Preference number: 5 (lower is better) Translates to: SSASQVTEPQVPQWL*SLRCNLIANICMLG Trigger: TCCGAGCATACAAATATTTGCAATGAGGTTGCACCGCAGACTCCACAGCCATTGTGGCACCTGGGGCTCTGTGACTTGGGAGGCAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS TCA 90 bp | CTGTCCCTTCAGTCTGGCCCCTCAGCATCTGAGTCAGTGGGAATGTaGTGGGCCCCATATGTAGAAGGAAGAACTGAAAGGAAGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: LSLQSGPSASESVGM*WAPYVEGRTERKHR Trigger: CCTGTGCTTCCTTTCAGTTCTTCCTTCTACATATGGGGCCCATCACATTCCCACTGACTCAGATGCTGAGGGGCCAGACTGAAGGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS GCA 90 bp | TCCTCCCTCCTCATCATGGGTTGCTCGTTGCAAGTGAAAGTCTCGTaGAGTAGGTTCCCTGTGCCTTCTTCTCTGGCCCTGACTTTGACA | + |
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Preference number: 5 (lower is better) Translates to: SSLLIMGCSLQVKVS*SRFPVPSSLALTLT Trigger: TGTCAAAGTCAGGGCCAGAGAAGAAGGCACAGGGAACCTACTGCACGAGACTTTCACTTGCAACGAGCAACCCATGATGAGGAGGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS TCA 90 bp | AACCGTCGGCTGTTGGGGGTGAAAGGAAACTCCATAGTACTATACTaGGGTGACGTTTCCACCACCAACCATCTGCTTGGGCCCCTCTTA | + |
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Preference number: 5 (lower is better) Translates to: NRRLLGVKGNSIVLY*GDVSTTNHLLGPLL Trigger: TAAGAGGGGCCCAAGCAGATGGTTGGTGGTGGAAACGTCACCTCAGTATAGTACTATGGAGTTTCCTTTCACCCCCAACAGCCGACGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000554542.2 ENST00000557075.6 ENST00000653070.1 ENST00000654017.1 |
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| CDS CCA 90 bp | AAGCTTCTACTAGATGGGTCAGATCCGTTCTCTGACTTGATGCAATaGCCACTGTCCCTTCAGTCTGGCCCCTCAGCATCTGAGTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: KLLLDGSDPFSDLMQ*PLSLQSGPSASESV Trigger: CACTGACTCAGATGCTGAGGGGCCAGACTGAAGGGACAGTGGCCATTGCATCAAGTCAGAGAACGGATCTGACCCATCTAGTAGAAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CCA 90 bp | CTTCGTTTTGGGAGAAATTCCAGGATTTCAGACTCTCAGGGCCCATaGTCACTGAGCTCAATGTCCCCAATAGGTCACACCCTGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: LRFGRNSRISDSQGP*SLSSMSPIGHTLQL Trigger: CAGCTGCAGGGTGTGACCTATTGGGGACATTGAGCTCAGTGACCATGGGCCCTGAGAGTCTGAAATCCTGGAATTTCTCCCAAAACGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS GCA 90 bp | CCTCCCAAGTCACAGAGCCCCAGGTGCCACAATGGCTGTGGAGTCTaGGGTGCAACCTCATTGCAAATATTTGTATGCTCGGAAGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: PPKSQSPRCHNGCGV*GATSLQIFVCSEEK Trigger: TTTTTCTTCCGAGCATACAAATATTTGCAATGAGGTTGCACCGCAGACTCCACAGCCATTGTGGCACCTGGGGCTCTGTGACTTGGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CCA 90 bp | AGCACAGCCACCAGAACCACCAGTCCTCAGCTTCAACTGAGCCCCTaGGCTACTTCAGCATGTTCTCCTCACATCTGTACTCACATATAT | + |
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Preference number: 5 (lower is better) Translates to: STATRTTSPQLQLSP*ATSACSPHICTHIY Trigger: ATATATGTGAGTACAGATGTGAGGAGAACATGCTGAAGTAGCCCAGGGGCTCAGTTGAAGCTGAGGACTGGTGGTTCTGGTGGCTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554542.2 |
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| CDS TCA 90 bp | TCGGCTGTTGGGGGTGAAAGGAAACTCCATAGTACTATACTGAGGTaGCGTTTCCACCACCAACCATCTGCTTGGGCCCCTCTTAATTCT | + |
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Preference number: 5 (lower is better) Translates to: SAVGGERKLHSTILR*RFHHQPSAWAPLNS Trigger: AGAATTAAGAGGGGCCCAAGCAGATGGTTGGTGGTGGAAACGTCACCTCAGTATAGTACTATGGAGTTTCCTTTCACCCCCAACAGCCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000554542.2 ENST00000557075.6 ENST00000653070.1 ENST00000654017.1 |
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| CDS GCA 90 bp | GCCCCAGGTGCCACAATGGCTGTGGAGTCTGCGGTGCAACCTCATTaGAAATATTTGTATGCTCGGAAGAAAAACACGAGTACAATGTCC | + |
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Preference number: 5 (lower is better) Translates to: APGATMAVESAVQPH*KYLYARKKNTSTMS Trigger: GGACATTGTACTCGTGTTTTTCTTCCGAGCATACAAATATTTGCAATGAGGTTGCACCGCAGACTCCACAGCCATTGTGGCACCTGGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS GCA 90 bp | CAAGTCACAGAGCCCCAGGTGCCACAATGGCTGTGGAGTCTGCGGTaGAACCTCATTGCAAATATTTGTATGCTCGGAAGAAAAACACGA | + |
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Preference number: 5 (lower is better) Translates to: QVTEPQVPQWLWSLR*NLIANICMLGRKTR Trigger: TCGTGTTTTTCTTCCGAGCATACAAATATTTGCAATGAGGTTGCACCGCAGACTCCACAGCCATTGTGGCACCTGGGGCTCTGTGACTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CCA 90 bp | ATCTGCTTTAGGTGGAGGCTTCAAGAAGCTTCCACTCATGATGGATaGCAAAGGGGAGCAGGTATATCACACAGTGAGAAGGGGGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: ICFRWRLQEASTHDG*QRGAGISHSEKGEQ Trigger: TTGCTCCCCCTTCTCACTGTGTGATATACCTGCTCCCCTTTGCCATCCATCATGAGTGGAAGCTTCTTGAAGCCTCCACCTAAAGCAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000554542.2 ENST00000557075.6 ENST00000653070.1 ENST00000654017.1 |
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| CDS TCA 90 bp | CTGGTGGCTTCAAAGATTTTGACATTGAAAACTTGTCCCAGTACCTaGAACATACAATGTCATGTGTCAGCAAGCTCAGCCTGGAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: LVASKILTLKTCPST*NIQCHVSASSAWSP Trigger: TGGGCTCCAGGCTGAGCTTGCTGACACATGACATTGTATGTTTCAGGTACTGGGACAAGTTTTCAATGTCAAAATCTTTGAAGCCACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS TCA 90 bp | TATATCTTCCTACAAGTTCCCTCGCCCTTTCACGGGCTGAAGCTCTaGCTCTCTCAGAGAACATTAGCTATTGGTCAGGAATATTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: YIFLQVPSPFHGLKL*LSQRTLAIGQEYCA Trigger: TGCACAATATTCCTGACCAATAGCTAATGTTCTCTGAGAGAGTCAGAGCTTCAGCCCGTGAAAGGGCGAGGGAACTTGTAGGAAGATATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554542.2 |
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| CDS GCA 90 bp | AATGGCTGTGGAGTCTGCGGTGCAACCTCATTGCAAATATTTGTATaGTCGGAAGAAAAACACGAGTACAATGTCCTATATTTACGAGGA | + |
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Preference number: 5 (lower is better) Translates to: NGCGVCGATSLQIFV*SEEKHEYNVLYLRG Trigger: TCCTCGTAAATATAGGACATTGTACTCGTGTTTTTCTTCCGAGCATACAAATATTTGCAATGAGGTTGCACCGCAGACTCCACAGCCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 90 bp | GTCAGAAGCCGTCAGGAGCCTCTTGCAGCCTTGACAGTGCAGTTCTaGCCAGGTCCCAGCAGGAACGAACTGGAAACCTCCTGGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VRSRQEPLAALTVQF*PGPSRNELETSWVS Trigger: GGAAACCCAGGAGGTTTCCAGTTCGTTCCTGCTGGGACCTGGCAAGAACTGCACTGTCAAGGCTGCAAGAGGCTCCTGACGGCTTCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000554542.2 ENST00000557075.6 ENST00000653070.1 ENST00000654017.1 |
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| CDS GCA 72 bp | TCTGAACTGACTCTTCCTTGGGGGTGGCAGGCGCACTaGCTCCTTGTCTACCGCTGGACAGTAGACACCTTG | + |
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Preference number: 6 (lower is better) Translates to: SELTLPWGWQAH*LLVYRWTVDTL Trigger: CAAGGTGTCTACTGTCCAGCGGTAGACAAGGAGGCAGTGCGCCTGCCACCCCCAAGGAAGAGTCAGTTCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557075.6 ENST00000654017.1 |
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| CDS GCA 72 bp | TCTCTGGCCCTGACTTTGACAGGAGACCTCTTCTGGTaGCTTCTGGACCACCTGCTGCCTTACATCTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SLALTLTGDLFW*LLDHLLPYIWA Trigger: AGCCCAGATGTAAGGCAGCAGGTGGTCCAGAAGGCACCAGAAGAGGTCTCCTGTCAAAGTCAGGGCCAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS GCA 72 bp | AAGAAGGTCTTGGGTCCTTGTGTCTGGGGGACTCAATaGCCCCAGGAATCCTCCCTCCTCATCATGGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: KKVLGPCVWGTQ*PQESSLLIMGC Trigger: GCAACCCATGATGAGGAGGGAGGATTCCTGGGGGCATTGAGTCCCCCAGACACAAGGACCCAAGACCTTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CCA 72 bp | CAGTGCAGTTCTTGCCAGGTCCCAGCAGGAACGAACTaGAAACCTCCTGGGTTTCCAGCAGCTGCTGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: QCSSCQVPAGTN*KPPGFPAAAVL Trigger: AAGCACAGCAGCTGCTGGAAACCCAGGAGGTTTCCAGTTCGTTCCTGCTGGGACCTGGCAAGAACTGCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000554542.2 ENST00000557075.6 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 72 bp | GTCATGTGTCAGCAAGCTCAGCCTGGAGCCCACACCTaGGCCATCTGCCCAGAATTCTCACCCCAGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: VMCQQAQPGAHT*AICPEFSPQFS Trigger: AGAGAACTGGGGTGAGAATTCTGGGCAGATGGCCAAGGTGTGGGCTCCAGGCTGAGCTTGCTGACACATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS GCA 72 bp | TCTGAACTGACTCTTCCTTGGGGGTGGCAGGCGCACTaGCTCCTTGTCTACCGCTGTGGGTTTAGACAAAGT | + |
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Preference number: 6 (lower is better) Translates to: SELTLPWGWQAH*LLVYRCGFRQS Trigger: ACTTTGTCTAAACCCACAGCGGTAGACAAGGAGGCAGTGCGCCTGCCACCCCCAAGGAAGAGTCAGTTCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000554542.2 |
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| CDS GCA 72 bp | AGGAACGAACTGGAAACCTCCTGGGTTTCCAGCAGCTaGTGTGCTTCTGAACTGACTCTTCCTTGGGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RNELETSWVSSS*CASELTLPWGW Trigger: CCACCCCCAAGGAAGAGTCAGTTCAGAAGCACAGCAGCTGCTGGAAACCCAGGAGGTTTCCAGTTCGTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000554542.2 ENST00000557075.6 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 72 bp | AGTAGGTTCCCTGTGCCTTCTTCTCTGGCCCTGACTTaGACAGGAGACCTCTTCTGGTGCCTTCTGGACCAC | + |
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Preference number: 6 (lower is better) Translates to: SRFPVPSSLALT*TGDLFWCLLDH Trigger: GTGGTCCAGAAGGCACCAGAAGAGGTCTCCTGTCAAAGTCAGGGCCAGAGAAGAAGGCACAGGGAACCTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 72 bp | CCCCAGGAATCCTCCCTCCTCATCATGGGTTGCTCGTaGCAAGTGAAAGTCTCGTGCAGTAGGTTCCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PQESSLLIMGCS*QVKVSCSRFPV Trigger: CACAGGGAACCTACTGCACGAGACTTTCACTTGCAACGAGCAACCCATGATGAGGAGGGAGGATTCCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS GCA 72 bp | CTCATCATGGGTTGCTCGTTGCAAGTGAAAGTCTCGTaGAGTAGGTTCCCTGTGCCTTCTTCTCTGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LIMGCSLQVKVS*SRFPVPSSLAL Trigger: CAGGGCCAGAGAAGAAGGCACAGGGAACCTACTGCACGAGACTTTCACTTGCAACGAGCAACCCATGATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS GCA 72 bp | TCTGAACTGACTCTTCCTTGGGGGTGGCAGGCGCACTaGCTCCTTGTCTACCGCTTGCTTCAATTTTCACTC | + |
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Preference number: 6 (lower is better) Translates to: SELTLPWGWQAH*LLVYRLLQFSL Trigger: GAGTGAAAATTGAAGCAAGCGGTAGACAAGGAGGCAGTGCGCCTGCCACCCCCAAGGAAGAGTCAGTTCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653070.1 |
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| CDS CCA 72 bp | CTAGATGGGTCAGATCCGTTCTCTGACTTGATGCAATaGCCACTGTCCCTTCAGTCTGGCCCCTCAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: LDGSDPFSDLMQ*PLSLQSGPSAS Trigger: AGATGCTGAGGGGCCAGACTGAAGGGACAGTGGCCATTGCATCAAGTCAGAGAACGGATCTGACCCATCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS TCA 72 bp | CAGTCTGGCCCCTCAGCATCTGAGTCAGTGGGAATGTaGTGGGCCCCATATGTAGAAGGAAGAACTGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: QSGPSASESVGM*WAPYVEGRTER Trigger: CCTTTCAGTTCTTCCTTCTACATATGGGGCCCATCACATTCCCACTGACTCAGATGCTGAGGGGCCAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS TCA 72 bp | GGGGGTGAAAGGAAACTCCATAGTACTATACTGAGGTaGCGTTTCCACCACCAACCATCTGCTTGGGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: GGERKLHSTILR*RFHHQPSAWAP Trigger: AGGGGCCCAAGCAGATGGTTGGTGGTGGAAACGTCACCTCAGTATAGTACTATGGAGTTTCCTTTCACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000554542.2 ENST00000557075.6 ENST00000653070.1 ENST00000654017.1 |
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| CDS TCA 72 bp | CGACTTCACTTCAAGAAGTTAGCAGTCTGCAAACTGTaGGAGCCCTCACCAGAACCCGATCATGCAGGCACC | + |
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Preference number: 6 (lower is better) Translates to: RLHFKKLAVCKL*EPSPEPDHAGT Trigger: GGTGCCTGCATGATCGGGTTCTGGTGAGGGCTCTCACAGTTTGCAGACTGCTAACTTCTTGAAGTGAAGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557075.6 |
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| CDS GCA 72 bp | GAGCCCCAGGTGCCACAATGGCTGTGGAGTCTGCGGTaGAACCTCATTGCAAATATTTGTATGCTCGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: EPQVPQWLWSLR*NLIANICMLGR Trigger: TCTTCCGAGCATACAAATATTTGCAATGAGGTTGCACCGCAGACTCCACAGCCATTGTGGCACCTGGGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS GCA 72 bp | TCACAGAGCCCCAGGTGCCACAATGGCTGTGGAGTCTaGGGTGCAACCTCATTGCAAATATTTGTATGCTCG | + |
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Preference number: 6 (lower is better) Translates to: SQSPRCHNGCGV*GATSLQIFVCS Trigger: CGAGCATACAAATATTTGCAATGAGGTTGCACCGCAGACTCCACAGCCATTGTGGCACCTGGGGCTCTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 72 bp | CACTGCCTCCTTGTCTACCGCTGGACAGTAGACACCTaGCTTCAATTTTCACTCTTCGCCCCTGGAAACCGT | + |
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Preference number: 6 (lower is better) Translates to: HCLLVYRWTVDT*LQFSLFAPGNR Trigger: ACGGTTTCCAGGGGCGAAGAGTGAAAATTGAAGCAAGGTGTCTACTGTCCAGCGGTAGACAAGGAGGCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557075.6 ENST00000654017.1 |
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| CDS CAA 90 bp | AGCCGGGTAAGACTCACACTTTGGCTTCCCTACATGGACTTCGTTTaGGGAGAAATTCCAGGATTTCAGACTCTCAGGGCCCATGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: SRVRLTLWLPYMDFV*GEIPGFQTLRAHGH Trigger: GTGACCATGGGCCCTGAGAGTCTGAAATCCTGGAATTTCTCCCAAAACGAAGTCCATGTAGGGAAGCCAAAGTGTGAGTCTTACCCGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS TCA 72 bp | AATCCTCCCTCCTCATCATGGGTTGCTCGTTGCAAGTaGAAGTCTCGTGCAGTAGGTTCCCTGTGCCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: NPPSSSWVARCK*KSRAVGSLCLL Trigger: AAGAAGGCACAGGGAACCTACTGCACGAGACTTTCACTTGCAACGAGCAACCCATGATGAGGAGGGAGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CCA 72 bp | CTGTGCAGGAAGCATAGTGTCGGCATCTGCTTTAGGTaGAGGCTTCAAGAAGCTTCCACTCATGATGGATGG | + |
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Preference number: 6 (lower is better) Translates to: LCRKHSVGICFR*RLQEASTHDGW Trigger: CCATCCATCATGAGTGGAAGCTTCTTGAAGCCTCCACCTAAAGCAGATGCCGACACTATGCTTCCTGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000554542.2 ENST00000557075.6 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 90 bp | ACATACAATGTCATGTGTCAGCAAGCTCAGCCTGGAGCCCACACCTaGGCCATCTGCCCAGAATTCTCACCCCAGTTCTCTAAAACTCTA | + |
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Preference number: 6 (lower is better) Translates to: TYNVMCQQAQPGAHT*AICPEFSPQFSKTL Trigger: TAGAGTTTTAGAGAACTGGGGTGAGAATTCTGGGCAGATGGCCAAGGTGTGGGCTCCAGGCTGAGCTTGCTGACACATGACATTGTATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS TCA 72 bp | CTGTTGGGGGTGAAAGGAAACTCCATAGTACTATACTaGGGTGACGTTTCCACCACCAACCATCTGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LLGVKGNSIVLY*GDVSTTNHLLG Trigger: CCCAAGCAGATGGTTGGTGGTGGAAACGTCACCTCAGTATAGTACTATGGAGTTTCCTTTCACCCCCAACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000554542.2 ENST00000557075.6 ENST00000653070.1 ENST00000654017.1 |
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| CDS TCA 72 bp | CTACAAGTTCCCTCGCCCTTTCACGGGCTGAAGCTCTaGCTCTCTCAGAGAACATTAGCTATTGGTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LQVPSPFHGLKL*LSQRTLAIGQE Trigger: TTCCTGACCAATAGCTAATGTTCTCTGAGAGAGTCAGAGCTTCAGCCCGTGAAAGGGCGAGGGAACTTGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000554542.2 |
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| CDS CCA 72 bp | TGCTGCCTAGAATCCTTGATGCCTCCGAAGTTAGACTaGAGTTGGATTAACCCGGCCTCTCTCTGTGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: CCLESLMPPKLD*SWINPASLCGN Trigger: ATTTCCACAGAGAGAGGCCGGGTTAATCCAACTCCAGTCTAACTTCGGAGGCATCAAGGATTCTAGGCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CCA 72 bp | AGGTGGAGGCTTCAAGAAGCTTCCACTCATGATGGATaGCAAAGGGGAGCAGGTATATCACACAGTGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: RWRLQEASTHDG*QRGAGISHSEK Trigger: CTTCTCACTGTGTGATATACCTGCTCCCCTTTGCCATCCATCATGAGTGGAAGCTTCTTGAAGCCTCCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000554542.2 ENST00000557075.6 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 90 bp | AGCCCCAGGTGCCACAATGGCTGTGGAGTCTGCGGTGCAACCTCATaGCAAATATTTGTATGCTCGGAAGAAAAACACGAGTACAATGTC | + |
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Preference number: 6 (lower is better) Translates to: SPRCHNGCGVCGATS*QIFVCSEEKHEYNV Trigger: GACATTGTACTCGTGTTTTTCTTCCGAGCATACAAATATTTGCAATGAGGTTGCACCGCAGACTCCACAGCCATTGTGGCACCTGGGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 90 bp | CAAAACAATAAGCTTCTACTAGATGGGTCAGATCCGTTCTCTGACTaGATGCAATGGCCACTGTCCCTTCAGTCTGGCCCCTCAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: QNNKLLLDGSDPFSD*MQWPLSLQSGPSAS Trigger: AGATGCTGAGGGGCCAGACTGAAGGGACAGTGGCCATTGCATCAAGTCAGAGAACGGATCTGACCCATCTAGTAGAAGCTTATTGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS TCA 72 bp | GAAAAGGCAAGAAAAAGGTTCTCCTCTAGAGCCTCCTaGGGAGCACAGCCTTGCCAACACTTTGAACTTTGC | + |
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Preference number: 6 (lower is better) Translates to: EKARKRFSSRAS*GAQPCQHFELC Trigger: GCAAAGTTCAAAGTGTTGGCAAGGCTGTGCTCCTCAGGAGGCTCTAGAGGAGAACCTTTTTCTTGCCTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS TCA 72 bp | AAAAGAAGGAAGGAAAGGAAGCCACCAGCTTCCTGCTaGGTCTTGATTAGGGCTCCTGGACAGATATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: KRRKERKPPASC*VLIRAPGQIFS Trigger: GGAGAATATCTGTCCAGGAGCCCTAATCAAGACTCAGCAGGAAGCTGGTGGCTTCCTTTCCTTCCTTCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 72 bp | CTTCAGCCTCATAACGTCGGAGCAATGGTATCAGACTaGATGCAGAGACTACCCGGGCATATGTGGCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: LQPHNVGAMVSD*MQRLPGHMWLF Trigger: AAAAAGCCACATATGCCCGGGTAGTCTCTGCATCAAGTCTGATACCATTGCTCCGACGTTATGAGGCTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 72 bp | CTAGAGCCTCCTGAGGAGCACAGCCTTGCCAACACTTaGAACTTTGCCAGTAGTTTGAACTTCTGTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LEPPEEHSLANT*NFASSLNFCLP Trigger: TGGAAGACAGAAGTTCAAACTACTGGCAAAGTTCAAAGTGTTGGCAAGGCTGTGCTCCTCAGGAGGCTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 72 bp | AGACTCACACTTTGGCTTCCCTACATGGACTTCGTTTaGGGAGAAATTCCAGGATTTCAGACTCTCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RLTLWLPYMDFV*GEIPGFQTLRA Trigger: GGCCCTGAGAGTCTGAAATCCTGGAATTTCTCCCAAAACGAAGTCCATGTAGGGAAGCCAAAGTGTGAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 90 bp | GAATTCACTTGGAAAAAGAAACACGGGAGATGCTGCCTAGAATCCTaGATGCCTCCGAAGTTAGACTGGAGTTGGATTAACCCGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: EFTWKKKHGRCCLES*MPPKLDWSWINPAS Trigger: AGAGGCCGGGTTAATCCAACTCCAGTCTAACTTCGGAGGCATCAAGGATTCTAGGCAGCATCTCCCGTGTTTCTTTTTCCAAGTGAATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS TCA 72 bp | GGGAATGTGATGGGCCCCATATGTAGAAGGAAGAACTaGAAGGAAGCACAGGAAGAACAGGAAGGAAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: GNVMGPICRRKN*KEAQEEQEGSK Trigger: TTTGCTTCCTTCCTGTTCTTCCTGTGCTTCCTTTCAGTTCTTCCTTCTACATATGGGGCCCATCACATTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS GCA 72 bp | CAGGAATTCACTTGGAAAAAGAAACACGGGAGATGCTaGCTAGAATCCTTGATGCCTCCGAAGTTAGACTGG | + |
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Preference number: 6 (lower is better) Translates to: QEFTWKKKHGRC*LESLMPPKLDW Trigger: CCAGTCTAACTTCGGAGGCATCAAGGATTCTAGGCAGCATCTCCCGTGTTTCTTTTTCCAAGTGAATTCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS GCA 72 bp | CTCCAGGAATTCACTTGGAAAAAGAAACACGGGAGATaGTGCCTAGAATCCTTGATGCCTCCGAAGTTAGAC | + |
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Preference number: 6 (lower is better) Translates to: LQEFTWKKKHGR*CLESLMPPKLD Trigger: GTCTAACTTCGGAGGCATCAAGGATTCTAGGCAGCATCTCCCGTGTTTCTTTTTCCAAGTGAATTCCTGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS GCA 72 bp | GCCACAATGGCTGTGGAGTCTGCGGTGCAACCTCATTaGAAATATTTGTATGCTCGGAAGAAAAACACGAGT | + |
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Preference number: 6 (lower is better) Translates to: ATMAVESAVQPH*KYLYARKKNTS Trigger: ACTCGTGTTTTTCTTCCGAGCATACAAATATTTGCAATGAGGTTGCACCGCAGACTCCACAGCCATTGTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 72 bp | TGCCACAATGGCTGTGGAGTCTGCGGTGCAACCTCATaGCAAATATTTGTATGCTCGGAAGAAAAACACGAG | + |
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Preference number: 6 (lower is better) Translates to: CHNGCGVCGATS*QIFVCSEEKHE Trigger: CTCGTGTTTTTCTTCCGAGCATACAAATATTTGCAATGAGGTTGCACCGCAGACTCCACAGCCATTGTGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 72 bp | CAGTCAGTTGTAAACCAGCCGGGTAAGACTCACACTTaGGCTTCCCTACATGGACTTCGTTTTGGGAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: QSVVNQPGKTHT*ASLHGLRFGRN Trigger: ATTTCTCCCAAAACGAAGTCCATGTAGGGAAGCCAAAGTGTGAGTCTTACCCGGCTGGTTTACAACTGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 90 bp | GATGCAAAGACACATGGACCTCATTGTTTTCCTCCAGGAATTCACTaGGAAAAAGAAACACGGGAGATGCTGCCTAGAATCCTTGATGCC | + |
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Preference number: 6 (lower is better) Translates to: DAKTHGPHCFPPGIH*EKETREMLPRILDA Trigger: GGCATCAAGGATTCTAGGCAGCATCTCCCGTGTTTCTTTTTCCAAGTGAATTCCTGGAGGAAAACAATGAGGTCCATGTGTCTTTGCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 90 bp | AGCAAATGTCAGTCAGTTGTAAACCAGCCGGGTAAGACTCACACTTaGGCTTCCCTACATGGACTTCGTTTTGGGAGAAATTCCAGGATT | + |
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Preference number: 6 (lower is better) Translates to: SKCQSVVNQPGKTHT*ASLHGLRFGRNSRI Trigger: AATCCTGGAATTTCTCCCAAAACGAAGTCCATGTAGGGAAGCCAAAGTGTGAGTCTTACCCGGCTGGTTTACAACTGACTGACATTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CCA 72 bp | CACATGGACCTCATTGTTTTCCTCCAGGAATTCACTTaGAAAAAGAAACACGGGAGATGCTGCCTAGAATCC | + |
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Preference number: 6 (lower is better) Translates to: HMDLIVFLQEFT*KKKHGRCCLES Trigger: GGATTCTAGGCAGCATCTCCCGTGTTTCTTTTTCCAAGTGAATTCCTGGAGGAAAACAATGAGGTCCATGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 72 bp | TGGAAAAAGAAACACGGGAGATGCTGCCTAGAATCCTaGATGCCTCCGAAGTTAGACTGGAGTTGGATTAAC | + |
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Preference number: 6 (lower is better) Translates to: WKKKHGRCCLES*MPPKLDWSWIN Trigger: GTTAATCCAACTCCAGTCTAACTTCGGAGGCATCAAGGATTCTAGGCAGCATCTCCCGTGTTTCTTTTTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 72 bp | GCTGTGGAGTCTGCGGTGCAACCTCATTGCAAATATTaGTATGCTCGGAAGAAAAACACGAGTACAATGTCC | + |
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Preference number: 6 (lower is better) Translates to: AVESAVQPHCKY*YARKKNTSTMS Trigger: GGACATTGTACTCGTGTTTTTCTTCCGAGCATACAAATATTTGCAATGAGGTTGCACCGCAGACTCCACAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 72 bp | GAGGCAAGAGAAGTAGTGTCAGAATTAGAGACGAATTaGCAGAAGCTGGCTTTTAAGATGGAGGAAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: EAREVVSELETN*QKLAFKMEEEA Trigger: GGCCTCTTCCTCCATCTTAAAAGCCAGCTTCTGCAAATTCGTCTCTAATTCTGACACTACTTCTCTTGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS CAA 90 bp | GCCACAATGGCTGTGGAGTCTGCGGTGCAACCTCATTGCAAATATTaGTATGCTCGGAAGAAAAACACGAGTACAATGTCCTATATTTAC | + |
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Preference number: 6 (lower is better) Translates to: ATMAVESAVQPHCKY*YARKKNTSTMSYIY Trigger: GTAAATATAGGACATTGTACTCGTGTTTTTCTTCCGAGCATACAAATATTTGCAATGAGGTTGCACCGCAGACTCCACAGCCATTGTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS TCA 72 bp | CAATGTTTTCTGGATGCTTTCCTTAGCCTGAGTTTCTaGACCTACTACTATATGAAGGAGTACTGCCAAGAC | + |
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Preference number: 6 (lower is better) Translates to: QCFLDAFLSLSF*TYYYMKEYCQD Trigger: GTCTTGGCAGTACTCCTTCATATAGTAGTAGGTTCAGAAACTCAGGCTAAGGAAAGCATCCAGAAAACATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS GCA 72 bp | GGAGTCTGCGGTGCAACCTCATTGCAAATATTTGTATaGTCGGAAGAAAAACACGAGTACAATGTCCTATAT | + |
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Preference number: 6 (lower is better) Translates to: GVCGATSLQIFV*SEEKHEYNVLY Trigger: ATATAGGACATTGTACTCGTGTTTTTCTTCCGAGCATACAAATATTTGCAATGAGGTTGCACCGCAGACTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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| CDS GCA 72 bp | GATCAGAACTACAATTACAAGCTATCCACAAACTGTTaGAGAGGCAGACAATGTTTTCTGGATGCTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: DQNYNYKLSTNC*RGRQCFLDAFL Trigger: AAGGAAAGCATCCAGAAAACATTGTCTGCCTCTGCAACAGTTTGTGGATAGCTTGTAATTGTAGTTCTGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000554542.2 ENST00000653070.1 ENST00000654017.1 |
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