Pregenerated sensors for LINC00929 (Homo sapiens)
Ensembl gene IDs: ENSG00000259150Ensembl transcript IDs: ENST00000553382.2, ENST00000556159.6, ENST00000556213.6, ENST00000557523.2, ENST00000557672.1, ENST00000653113.1, ENST00000653950.1, ENST00000655230.1, ENST00000655889.1, ENST00000656772.1, ENST00000658029.1, ENST00000658161.1, ENST00000662745.1, ENST00000663189.1, ENST00000663322.1, ENST00000663624.1, ENST00000665527.1, ENST00000665897.1, ENST00000666709.1, ENST00000668127.1, ENST00000669086.1
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCCTGCATACAGTGAAGAGGGCAGCAATGCCGCTCCTGTGTGACTaGCACACACCCCCTCAAAGCCCACAGTGTTCCCCCGTGCACTCG | + |
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Preference number: 5 (lower is better) Translates to: GLHTVKRAAMPLLCD*HTPPQSPQCSPVHS Trigger: CGAGTGCACGGGGGAACACTGTGGGCTTTGAGGGGGTGTGTGCCAGTCACACAGGAGCGGCATTGCTGCCCTCTTCACTGTATGCAGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000663624.1 |
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| CDS TCA 90 bp | CAGTGGCCTGCATACAGTGAAGAGGGCAGCAATGCCGCTCCTGTGTaGCTGGCACACACCCCCTCAAAGCCCACAGTGTTCCCCCGTGCA | + |
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Preference number: 5 (lower is better) Translates to: QWPAYSEEGSNAAPV*LAHTPSKPTVFPRA Trigger: TGCACGGGGGAACACTGTGGGCTTTGAGGGGGTGTGTGCCAGTCACACAGGAGCGGCATTGCTGCCCTCTTCACTGTATGCAGGCCACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000663624.1 |
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| CDS GCA 90 bp | CCCCACGTCATCCCTGCCCTCCGGATCCGCATCAGGGCTGCTTGTTaGAATCATAGATCACATTCAGGGCCCTCTGCAGTGTGGCGTAGA | + |
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Preference number: 5 (lower is better) Translates to: PHVIPALRIRIRAAC*NHRSHSGPSAVWRR Trigger: TCTACGCCACACTGCAGAGGGCCCTGAATGTGATCTATGATTGCAACAAGCAGCCCTGATGCGGATCCGGAGGGCAGGGATGACGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS GCA 90 bp | CCTCCACAGATCTCAAAGGCCAGGCCCGGAATCAACGAAACAACCTaGACAACGTGCTTGGCACCGGGCTTGGCGTGTAGCAATTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: PPQISKARPGINETT*TTCLAPGLACSNCP Trigger: AGGGCAATTGCTACACGCCAAGCCCGGTGCCAAGCACGTTGTGCAGGTTGTTTCGTTGATTCCGGGCCTGGCCTTTGAGATCTGTGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS GCA 90 bp | ATTCAGGGCCCTCTGCAGTGTGGCGTAGAAAAGCAGGTTCCAGCTTaGCAGCGCCTGCAAGCAGGATGCAGAGCCAGCCAGTTCATGGTA | + |
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Preference number: 5 (lower is better) Translates to: IQGPLQCGVEKQVPA*QRLQAGCRASQFMV Trigger: TACCATGAACTGGCTGGCTCTGCATCCTGCTTGCAGGCGCTGGCAAGCTGGAACCTGCTTTTCTACGCCACACTGCAGAGGGCCCTGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS CCA 90 bp | CAGCTTGCCAGCGCCTGCAAGCAGGATGCAGAGCCAGCCAGTTCATaGTATCCTCCACAGATCTCAAAGGCCAGGCCCGGAATCAACGAA | + |
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Preference number: 5 (lower is better) Translates to: QLASACKQDAEPASS*YPPQISKARPGINE Trigger: TTCGTTGATTCCGGGCCTGGCCTTTGAGATCTGTGGAGGATACCATGAACTGGCTGGCTCTGCATCCTGCTTGCAGGCGCTGGCAAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS GCA 90 bp | GGCGTAGAAAAGCAGGTTCCAGCTTGCCAGCGCCTGCAAGCAGGATaGAGAGCCAGCCAGTTCATGGTATCCTCCACAGATCTCAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: GVEKQVPACQRLQAG*RASQFMVSSTDLKG Trigger: GCCTTTGAGATCTGTGGAGGATACCATGAACTGGCTGGCTCTGCATCCTGCTTGCAGGCGCTGGCAAGCTGGAACCTGCTTTTCTACGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS CCA 90 bp | CAAAGGCCAGGCCCGGAATCAACGAAACAACCTGCACAACGTGCTTaGCACCGGGCTTGGCGTGTAGCAATTGCCCTCATGTCTTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: QRPGPESTKQPAQRA*HRAWRVAIALMSSS Trigger: ACTGGAAGACATGAGGGCAATTGCTACACGCCAAGCCCGGTGCCAAGCACGTTGTGCAGGTTGTTTCGTTGATTCCGGGCCTGGCCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS CCA 90 bp | CCCCGTGCACTCGCCCAGCCAGAGAACTTGGTTAGACTCCTCACCTaGAGTCGTTTCTCCCTCCTGTTGTGTACGAAATGTTGCCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: PRALAQPENLVRLLT*SRFSLLLCTKCCPK Trigger: CTTGGGGCAACATTTCGTACACAACAGGAGGGAGAAACGACTCCAGGTGAGGAGTCTAACCAAGTTCTCTGGCTGGGCGAGTGCACGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663624.1 |
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| CDS CCA 90 bp | CAAAGCCCACAGTGTTCCCCCGTGCACTCGCCCAGCCAGAGAACTTaGTTAGACTCCTCACCTGGAGTCGTTTCTCCCTCCTGTTGTGTA | + |
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Preference number: 5 (lower is better) Translates to: QSPQCSPVHSPSQRT*LDSSPGVVSPSCCV Trigger: TACACAACAGGAGGGAGAAACGACTCCAGGTGAGGAGTCTAACCAAGTTCTCTGGCTGGGCGAGTGCACGGGGGAACACTGTGGGCTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663624.1 |
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| CDS GCA 90 bp | ATCTCAAAGGCCAGGCCCGGAATCAACGAAACAACCTGCACAACGTaGTTGGCACCGGGCTTGGCGTGTAGCAATTGCCCTCATGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: ISKARPGINETTCTT*LAPGLACSNCPHVF Trigger: GAAGACATGAGGGCAATTGCTACACGCCAAGCCCGGTGCCAAGCACGTTGTGCAGGTTGTTTCGTTGATTCCGGGCCTGGCCTTTGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS CCA 90 bp | GCTGCTTGTTGCAATCATAGATCACATTCAGGGCCCTCTGCAGTGTaGCGTAGAAAAGCAGGTTCCAGCTTGCCAGCGCCTGCAAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: AACCNHRSHSGPSAV*RRKAGSSLPAPASR Trigger: CCTGCTTGCAGGCGCTGGCAAGCTGGAACCTGCTTTTCTACGCCACACTGCAGAGGGCCCTGAATGTGATCTATGATTGCAACAAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS TCA 90 bp | CTCTCCCCGATGGGTCAACCCAAAGCTGGAGTCTGCAGAAGTATGTaGGGAGTCCATATTCAAACACCTGGGCGGGCCTTTACCTGGACT | + |
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Preference number: 5 (lower is better) Translates to: LSPMGQPKAGVCRSM*GVHIQTPGRAFTWT Trigger: AGTCCAGGTAAAGGCCCGCCCAGGTGTTTGAATATGGACTCCTCACATACTTCTGCAGACTCCAGCTTTGGGTTGACCCATCGGGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000557523.2 ENST00000655230.1 ENST00000655889.1 ENST00000658161.1 ENST00000663189.1 ENST00000663322.1 |
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| CDS GCA 90 bp | CGGGCCTTTACCTGGACTAAAACCAGGGTTGTGCAGGAGCTGGCTTaGATAGGCTCACAGGAGGTGACTCTGAGTACCTCTCCCAAATTC | + |
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Preference number: 5 (lower is better) Translates to: RAFTWTKTRVVQELA*IGSQEVTLSTSPKF Trigger: GAATTTGGGAGAGGTACTCAGAGTCACCTCCTGTGAGCCTATGCAAGCCAGCTCCTGCACAACCCTGGTTTTAGTCCAGGTAAAGGCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000556213.6 ENST00000557523.2 ENST00000655230.1 ENST00000655889.1 ENST00000658161.1 ENST00000663189.1 ENST00000663322.1 ENST00000665897.1 |
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| CDS TCA 90 bp | ATCCGTTGCCCAGTACGGCAGAACTTGTGCCATCTCAGGGGTTCCTaGAGCTTCAGCACATGGGGCTCACTCACACTTGCAAACATCAGT | + |
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Preference number: 5 (lower is better) Translates to: IRCPVRQNLCHLRGS*SFSTWGSLTLANIS Trigger: ACTGATGTTTGCAAGTGTGAGTGAGCCCCATGTGCTGAAGCTTCAGGAACCCCTGAGATGGCACAAGTTCTGCCGTACTGGGCAACGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS GCA 90 bp | GGCTTGGCGTGTAGCAATTGCCCTCATGTCTTCCAGTGTCTTGTGTaGTTCAAGACCATCCGTTGCCCAGTACGGCAGAACTTGTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: GLACSNCPHVFQCLV*FKTIRCPVRQNLCH Trigger: ATGGCACAAGTTCTGCCGTACTGGGCAACGGATGGTCTTGAAGCACACAAGACACTGGAAGACATGAGGGCAATTGCTACACGCCAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS TCA 90 bp | TCTTCCTGTCACACCAGCAGACACACACACTGCACCAAACATCTTTaGTTTCTGTACTCTGACGCTTCGACATCTGGGGCCCTGCTGACC | + |
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Preference number: 5 (lower is better) Translates to: SSCHTSRHTHCTKHL*FLYSDASTSGALLT Trigger: GGTCAGCAGGGCCCCAGATGTCGAAGCGTCAGAGTACAGAAATCAAAGATGTTTGGTGCAGTGTGTGTGTCTGCTGGTGTGACAGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557672.1 ENST00000656772.1 |
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| CDS GCA 90 bp | AACGGTGTTAGCTGTGCAGCAGGATCAGGAAGCCCTGCACTAAAATaGAGCTGTGCTGCACCTGCCGGTCCACATAAGCAAAATCAAACC | + |
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Preference number: 5 (lower is better) Translates to: NGVSCAAGSGSPALK*SCAAPAGPHKQNQT Trigger: GGTTTGATTTTGCTTATGTGGACCGGCAGGTGCAGCACAGCTGCATTTTAGTGCAGGGCTTCCTGATCCTGCTGCACAGCTAACACCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000556159.6 ENST00000655230.1 ENST00000663624.1 ENST00000665897.1 |
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| CDS CCA 90 bp | TGCCTTTTGCTCTTAACTGCCTCCTCCGGCCATCAGCCTTGGATGTaGATATCAACAAGCACAGTTCGTTCCCTAGCTCACCCTCTGACA | + |
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Preference number: 5 (lower is better) Translates to: CLLLLTASSGHQPWM*ISTSTVRSLAHPLT Trigger: TGTCAGAGGGTGAGCTAGGGAACGAACTGTGCTTGTTGATATCCACATCCAAGGCTGATGGCCGGAGGAGGCAGTTAAGAGCAAAAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000557523.2 ENST00000655230.1 ENST00000655889.1 ENST00000658161.1 ENST00000663189.1 |
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| CDS CCA 90 bp | GTCCATTGCCTTTTGCTCTTAACTGCCTCCTCCGGCCATCAGCCTTaGATGTGGATATCAACAAGCACAGTTCGTTCCCTAGCTCACCCT | + |
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Preference number: 5 (lower is better) Translates to: VHCLLLLTASSGHQP*MWISTSTVRSLAHP Trigger: AGGGTGAGCTAGGGAACGAACTGTGCTTGTTGATATCCACATCCAAGGCTGATGGCCGGAGGAGGCAGTTAAGAGCAAAAGGCAATGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000557523.2 ENST00000655230.1 ENST00000655889.1 ENST00000658161.1 ENST00000663189.1 |
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| CDS GCA 90 bp | CTCCTCACCTGGAGTCGTTTCTCCCTCCTGTTGTGTACGAAATGTTaGCCCAAGTACCTCAGTCTGCTAACAACCTATTCTTCATCCTGT | + |
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Preference number: 5 (lower is better) Translates to: LLTWSRFSLLLCTKC*PKYLSLLTTYSSSC Trigger: ACAGGATGAAGAATAGGTTGTTAGCAGACTGAGGTACTTGGGGCAACATTTCGTACACAACAGGAGGGAGAAACGACTCCAGGTGAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663624.1 |
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| CDS TCA 90 bp | GTTCTCTCTTTCTCTCTTTCTCTCTCTCTCTGTGTGTCTCTTTCCTaGGGAAACATTTTTCTGAAGTCACGCCACCCAGCCTTCCACGTA | + |
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Preference number: 5 (lower is better) Translates to: VLSFSLSLSLCVSLS*GNIFLKSRHPAFHV Trigger: TACGTGGAAGGCTGGGTGGCGTGACTTCAGAAAAATGTTTCCTCAGGAAAGAGACACACAGAGAGAGAGAGAAAGAGAGAAAGAGAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000556213.6 ENST00000655889.1 ENST00000656772.1 ENST00000658161.1 ENST00000662745.1 ENST00000663189.1 ENST00000663322.1 ENST00000665527.1 ENST00000668127.1 |
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| CDS TCA 90 bp | TTCTCCTCCATGGGGCAGCATTACTCGGTCCATCAGACACAAAGATaGACTCAGCAACTATACAGCCACAATGTCAACCCTAAGAATCAC | + |
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Preference number: 5 (lower is better) Translates to: FSSMGQHYSVHQTQR*TQQLYSHNVNPKNH Trigger: GTGATTCTTAGGGTTGACATTGTGGCTGTATAGTTGCTGAGTTCATCTTTGTGTCTGATGGACCGAGTAATGCTGCCCCATGGAGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663624.1 |
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| CDS GCA 90 bp | AAGACAACCTGGAGTCGTTTCTCCCTCCTGTTGTGTACGAAATGTTaGCCCAAGTACCTCAGTCTGCTAACAACCTATTCTTCATCCTGT | + |
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Preference number: 5 (lower is better) Translates to: KTTWSRFSLLLCTKC*PKYLSLLTTYSSSC Trigger: ACAGGATGAAGAATAGGTTGTTAGCAGACTGAGGTACTTGGGGCAACATTTCGTACACAACAGGAGGGAGAAACGACTCCAGGTTGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000553382.2 ENST00000556213.6 ENST00000557672.1 ENST00000656772.1 ENST00000658161.1 ENST00000663189.1 ENST00000663322.1 ENST00000666709.1 ENST00000668127.1 |
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| CDS GCA 90 bp | TTGTTTTTCTGGAGTCGTTTCTCCCTCCTGTTGTGTACGAAATGTTaGCCCAAGTACCTCAGTCTGCTAACAACCTATTCTTCATCCTGT | + |
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Preference number: 5 (lower is better) Translates to: LFFWSRFSLLLCTKC*PKYLSLLTTYSSSC Trigger: ACAGGATGAAGAATAGGTTGTTAGCAGACTGAGGTACTTGGGGCAACATTTCGTACACAACAGGAGGGAGAAACGACTCCAGAAAAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS CCA 90 bp | AAGTACCTCAGTCTGCTAACAACCTATTCTTCATCCTGTTTAATGTaGAATTCTGCAGAAGGCTGGACTAAAACCAGGGTTGTGCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: KYLSLLTTYSSSCLM*NSAEGWTKTRVVQE Trigger: CTCCTGCACAACCCTGGTTTTAGTCCAGCCTTCTGCAGAATTCCACATTAAACAGGATGAAGAATAGGTTGTTAGCAGACTGAGGTACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000553382.2 ENST00000556159.6 ENST00000653950.1 ENST00000663624.1 ENST00000665527.1 ENST00000666709.1 ENST00000668127.1 |
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| CDS CCA 90 bp | GCAACACCTGCTGAGATTCTGAGATGTGAATTGGCATCTTCCATATaGAGTCTTCCAGTCCATGAGCATAGTGTATGTCTCCATGTAATG | + |
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Preference number: 5 (lower is better) Translates to: ATPAEILRCELASSI*SLPVHEHSVCLHVM Trigger: CATTACATGGAGACATACACTATGCTCATGGACTGGAAGACTCCATATGGAAGATGCCAATTCACATCTCAGAATCTCAGCAGGTGTTGC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000653113.1 ENST00000656772.1 ENST00000666709.1 ENST00000668127.1 ENST00000669086.1 |
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| CDS CCA 90 bp | AAGTACCTCAGTCTGCTAACAACCTATTCTTCATCCTGTTTAATGTaGAATTCTGCAGAAGGCAGCCTGCCCAGCTACTTAGGTCATAAG | + |
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Preference number: 5 (lower is better) Translates to: KYLSLLTTYSSSCLM*NSAEGSLPSYLGHK Trigger: CTTATGACCTAAGTAGCTGGGCAGGCTGCCTTCTGCAGAATTCCACATTAAACAGGATGAAGAATAGGTTGTTAGCAGACTGAGGTACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658029.1 |
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| CDS CCA 90 bp | ATTTCTGTCATATATCAAGTGTCAATGTATTCATGGGTCAGTTTCTaGATTCTCCAACCTGCGCCCCTCGTCTATTTGTCTATCCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: ISVIYQVSMYSWVSF*ILQPAPLVYLSIPR Trigger: TCTGGGGATAGACAAATAGACGAGGGGCGCAGGTTGGAGAATCCAGAAACTGACCCATGAATACATTGACACTTGATATATGACAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000653113.1 ENST00000656772.1 ENST00000666709.1 ENST00000668127.1 ENST00000669086.1 |
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| CDS CCA 90 bp | AAGTACCTCAGTCTGCTAACAACCTATTCTTCATCCTGTTTAATGTaGAATTCTGCAGAAGGCCTAAGGCATGGTTCTGAACAAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: KYLSLLTTYSSSCLM*NSAEGLRHGSEQER Trigger: CCTTTCTTGTTCAGAACCATGCCTTAGGCCTTCTGCAGAATTCCACATTAAACAGGATGAAGAATAGGTTGTTAGCAGACTGAGGTACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655230.1 ENST00000655889.1 ENST00000658161.1 ENST00000663189.1 |
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| CDS CCA 90 bp | TATAGGTTACATGAACCCCATGACTATTCAAGACTTACAGGTAGGTaGGTTCTCTCTTTCTCTCTTTCTCTCTCTCTCTGTGTGTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: YRLHEPHDYSRLTGR*VLSFSLSLSLCVSL Trigger: AAGAGACACACAGAGAGAGAGAGAAAGAGAGAAAGAGAGAACCCACCTACCTGTAAGTCTTGAATAGTCATGGGGTTCATGTAACCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658161.1 |
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| CDS TCA 90 bp | AGGAAAACATTCTTAAAGCTTCTGATCAAAGTGCATGGCACCCAGTaGGAGAGACAAGCATCCATCATTGTTTTATTAAGACTATGCTCT | + |
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Preference number: 5 (lower is better) Translates to: RKTFLKLLIKVHGTQ*ERQASIIVLLRLCS Trigger: AGAGCATAGTCTTAATAAAACAATGATGGATGCTTGTCTCTCTCACTGGGTGCCATGCACTTTGATCAGAAGCTTTAAGAATGTTTTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000653113.1 ENST00000656772.1 ENST00000666709.1 ENST00000668127.1 ENST00000669086.1 |
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| CDS CCA 72 bp | GCTCCCGTCTTTGCCTCTGGGACTGATGCCCAGAACTaGGGAAACAGCCCCGTGGGGGAGCTGCTGCCTTCG | + |
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Preference number: 6 (lower is better) Translates to: APVFASGTDAQN*GNSPVGELLPS Trigger: CGAAGGCAGCAGCTCCCCCACGGGGCTGTTTCCCCAGTTCTGGGCATCAGTCCCAGAGGCAAAGACGGGAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000556159.6 ENST00000655230.1 ENST00000663624.1 ENST00000665897.1 |
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| CDS GCA 72 bp | GCAGGTCAACCAGAAAGGCAGCCCCCACGTCATCCCTaGCCTCCGGATCCGCATCAGGGCTGCTTGTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: AGQPERQPPRHP*PPDPHQGCLLQ Trigger: TTGCAACAAGCAGCCCTGATGCGGATCCGGAGGGCAGGGATGACGTGGGGGCTGCCTTTCTGGTTGACCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS GCA 72 bp | CCTCTGCAGTGTGGCGTAGAAAAGCAGGTTCCAGCTTaGCAGCGCCTGCAAGCAGGATGCAGAGCCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PLQCGVEKQVPA*QRLQAGCRASQ Trigger: CTGGCTGGCTCTGCATCCTGCTTGCAGGCGCTGGCAAGCTGGAACCTGCTTTTCTACGCCACACTGCAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS CCA 72 bp | ACAGTGAAGAGGGCAGCAATGCCGCTCCTGTGTGACTaGCACACACCCCCTCAAAGCCCACAGTGTTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: TVKRAAMPLLCD*HTPPQSPQCSP Trigger: GGGGGAACACTGTGGGCTTTGAGGGGGTGTGTGCCAGTCACACAGGAGCGGCATTGCTGCCCTCTTCACTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663624.1 |
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| CDS GCA 72 bp | GCCAGGCCCGGAATCAACGAAACAACCTGCACAACGTaGTTGGCACCGGGCTTGGCGTGTAGCAATTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: ARPGINETTCTT*LAPGLACSNCP Trigger: AGGGCAATTGCTACACGCCAAGCCCGGTGCCAAGCACGTTGTGCAGGTTGTTTCGTTGATTCCGGGCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS CCA 72 bp | CAGTGTTCCCCCGTGCACTCGCCCAGCCAGAGAACTTaGTTAGACTCCTCACCTGGAGTCGTTTCTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: QCSPVHSPSQRT*LDSSPGVVSPS Trigger: GGAGGGAGAAACGACTCCAGGTGAGGAGTCTAACCAAGTTCTCTGGCTGGGCGAGTGCACGGGGGAACACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663624.1 |
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| CDS CAA 90 bp | CATTCAGGGCCCTCTGCAGTGTGGCGTAGAAAAGCAGGTTCCAGCTaGCCAGCGCCTGCAAGCAGGATGCAGAGCCAGCCAGTTCATGGT | + |
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Preference number: 6 (lower is better) Translates to: HSGPSAVWRRKAGSS*PAPASRMQSQPVHG Trigger: ACCATGAACTGGCTGGCTCTGCATCCTGCTTGCAGGCGCTGGCAAGCTGGAACCTGCTTTTCTACGCCACACTGCAGAGGGCCCTGAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS CAA 90 bp | TGCTCACAGAATTGTTGGCAGAGTCAGAGTGGATGGCTCCCGTCTTaGCCTCTGGGACTGATGCCCAGAACTGGGGAAACAGCCCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: CSQNCWQSQSGWLPS*PLGLMPRTGETAPW Trigger: CCACGGGGCTGTTTCCCCAGTTCTGGGCATCAGTCCCAGAGGCAAAGACGGGAGCCATCCACTCTGACTCTGCCAACAATTCTGTGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000556159.6 ENST00000655230.1 ENST00000663624.1 ENST00000665897.1 |
||
| CDS GCA 72 bp | ATCTCAAAGGCCAGGCCCGGAATCAACGAAACAACCTaGACAACGTGCTTGGCACCGGGCTTGGCGTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: ISKARPGINETT*TTCLAPGLACS Trigger: GCTACACGCCAAGCCCGGTGCCAAGCACGTTGTGCAGGTTGTTTCGTTGATTCCGGGCCTGGCCTTTGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
||
| CDS CCA 72 bp | GGCCCGGAATCAACGAAACAACCTGCACAACGTGCTTaGCACCGGGCTTGGCGTGTAGCAATTGCCCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: GPESTKQPAQRA*HRAWRVAIALM Trigger: CATGAGGGCAATTGCTACACGCCAAGCCCGGTGCCAAGCACGTTGTGCAGGTTGTTTCGTTGATTCCGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS CAA 90 bp | TCAAAGCCCACAGTGTTCCCCCGTGCACTCGCCCAGCCAGAGAACTaGGTTAGACTCCTCACCTGGAGTCGTTTCTCCCTCCTGTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SKPTVFPRALAQPEN*VRLLTWSRFSLLLC Trigger: ACACAACAGGAGGGAGAAACGACTCCAGGTGAGGAGTCTAACCAAGTTCTCTGGCTGGGCGAGTGCACGGGGGAACACTGTGGGCTTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000663624.1 |
||
| CDS GCA 72 bp | AAGCAGGTTCCAGCTTGCCAGCGCCTGCAAGCAGGATaGAGAGCCAGCCAGTTCATGGTATCCTCCACAGAT | + |
|
Preference number: 6 (lower is better) Translates to: KQVPACQRLQAG*RASQFMVSSTD Trigger: ATCTGTGGAGGATACCATGAACTGGCTGGCTCTGCATCCTGCTTGCAGGCGCTGGCAAGCTGGAACCTGCTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS GCA 72 bp | ATCCCTGCCCTCCGGATCCGCATCAGGGCTGCTTGTTaGAATCATAGATCACATTCAGGGCCCTCTGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: IPALRIRIRAAC*NHRSHSGPSAV Trigger: CACTGCAGAGGGCCCTGAATGTGATCTATGATTGCAACAAGCAGCCCTGATGCGGATCCGGAGGGCAGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS CCA 72 bp | GGGTGCTCACAGAATTGTTGGCAGAGTCAGAGTGGATaGCTCCCGTCTTTGCCTCTGGGACTGATGCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GCSQNCWQSQSG*LPSLPLGLMPR Trigger: TCTGGGCATCAGTCCCAGAGGCAAAGACGGGAGCCATCCACTCTGACTCTGCCAACAATTCTGTGAGCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000556159.6 ENST00000655230.1 ENST00000663624.1 ENST00000665897.1 |
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| CDS CAA 90 bp | CCCGGAATCAACGAAACAACCTGCACAACGTGCTTGGCACCGGGCTaGGCGTGTAGCAATTGCCCTCATGTCTTCCAGTGTCTTGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGINETTCTTCLAPG*ACSNCPHVFQCLVC Trigger: GCACACAAGACACTGGAAGACATGAGGGCAATTGCTACACGCCAAGCCCGGTGCCAAGCACGTTGTGCAGGTTGTTTCGTTGATTCCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS GCA 72 bp | AGCTGTGCAGCAGGATCAGGAAGCCCTGCACTAAAATaGAGCTGTGCTGCACCTGCCGGTCCACATAAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SCAAGSGSPALK*SCAAPAGPHKQ Trigger: TTGCTTATGTGGACCGGCAGGTGCAGCACAGCTGCATTTTAGTGCAGGGCTTCCTGATCCTGCTGCACAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000556159.6 ENST00000655230.1 ENST00000663624.1 ENST00000665897.1 |
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| CDS CCA 72 bp | AACTGGGTGCTCACAGAATTGTTGGCAGAGTCAGAGTaGATGGCTCCCGTCTTTGCCTCTGGGACTGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: NWVLTELLAESE*MAPVFASGTDA Trigger: GGCATCAGTCCCAGAGGCAAAGACGGGAGCCATCCACTCTGACTCTGCCAACAATTCTGTGAGCACCCAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000556159.6 ENST00000655230.1 ENST00000663624.1 ENST00000665897.1 |
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| CDS CAA 90 bp | CACCGGGCTTGGCGTGTAGCAATTGCCCTCATGTCTTCCAGTGTCTaGTGTGCTTCAAGACCATCCGTTGCCCAGTACGGCAGAACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: HRAWRVAIALMSSSV*CASRPSVAQYGRTC Trigger: ACAAGTTCTGCCGTACTGGGCAACGGATGGTCTTGAAGCACACAAGACACTGGAAGACATGAGGGCAATTGCTACACGCCAAGCCCGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS TCA 72 bp | TCCCCAAGTGACTGGGTGCTGTTGGTGATAGATCCATaGGGCCATGCTTACCAGCAGGTCAACCAGAAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPSDWVLLVIDP*GHAYQQVNQKG Trigger: GCCTTTCTGGTTGACCTGCTGGTAAGCATGGCCTCATGGATCTATCACCAACAGCACCCAGTCACTTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000556159.6 ENST00000655230.1 ENST00000663624.1 ENST00000665897.1 |
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| CDS GCA 72 bp | GTCTTCCAGTGTCTTGTGTGCTTCAAGACCATCCGTTaGCCAGTACGGCAGAACTTGTGCCATCTCAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: VFQCLVCFKTIR*PVRQNLCHLRG Trigger: ACCCCTGAGATGGCACAAGTTCTGCCGTACTGGGCAACGGATGGTCTTGAAGCACACAAGACACTGGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS GCA 72 bp | ACAACGTGCTTGGCACCGGGCTTGGCGTGTAGCAATTaGCCTCATGTCTTCCAGTGTCTTGTGTGCTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: TTCLAPGLACSN*PHVFQCLVCFK Trigger: CTTGAAGCACACAAGACACTGGAAGACATGAGGGCAATTGCTACACGCCAAGCCCGGTGCCAAGCACGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS CCA 72 bp | GCTCACCCTCTGACAGCCAAGCTCTTTCCTAGGTCTTaGGAGACTAGCCCAGTCAGTGATCTTCCCTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: AHPLTAKLFPRS*ETSPVSDLPFQ Trigger: TTGGAAGGGAAGATCACTGACTGGGCTAGTCTCCCAAGACCTAGGAAAGAGCTTGGCTGTCAGAGGGTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000557523.2 ENST00000655230.1 ENST00000655889.1 ENST00000658161.1 ENST00000663189.1 |
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| CDS CCA 72 bp | TGCAATCATAGATCACATTCAGGGCCCTCTGCAGTGTaGCGTAGAAAAGCAGGTTCCAGCTTGCCAGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CNHRSHSGPSAV*RRKAGSSLPAP Trigger: AGGCGCTGGCAAGCTGGAACCTGCTTTTCTACGCCACACTGCAGAGGGCCCTGAATGTGATCTATGATTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS CAA 72 bp | TGTCTTCCAGTGTCTTGTGTGCTTCAAGACCATCCGTaGCCCAGTACGGCAGAACTTGTGCCATCTCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: CLPVSCVLQDHP*PSTAELVPSQG Trigger: CCCCTGAGATGGCACAAGTTCTGCCGTACTGGGCAACGGATGGTCTTGAAGCACACAAGACACTGGAAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS CAA 72 bp | TGGCGTGTAGCAATTGCCCTCATGTCTTCCAGTGTCTaGTGTGCTTCAAGACCATCCGTTGCCCAGTACGGC | + |
|
Preference number: 6 (lower is better) Translates to: WRVAIALMSSSV*CASRPSVAQYG Trigger: GCCGTACTGGGCAACGGATGGTCTTGAAGCACACAAGACACTGGAAGACATGAGGGCAATTGCTACACGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS CAA 72 bp | AACGAAACAACCTGCACAACGTGCTTGGCACCGGGCTaGGCGTGTAGCAATTGCCCTCATGTCTTCCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: NETTCTTCLAPG*ACSNCPHVFQC Trigger: ACACTGGAAGACATGAGGGCAATTGCTACACGCCAAGCCCGGTGCCAAGCACGTTGTGCAGGTTGTTTCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS CAA 72 bp | AATTGTTGGCAGAGTCAGAGTGGATGGCTCCCGTCTTaGCCTCTGGGACTGATGCCCAGAACTGGGGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: NCWQSQSGWLPS*PLGLMPRTGET Trigger: TGTTTCCCCAGTTCTGGGCATCAGTCCCAGAGGCAAAGACGGGAGCCATCCACTCTGACTCTGCCAACAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000556159.6 ENST00000655230.1 ENST00000663624.1 ENST00000665897.1 |
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| CDS CAA 90 bp | GGTCCATTGCCTTTTGCTCTTAACTGCCTCCTCCGGCCATCAGCCTaGGATGTGGATATCAACAAGCACAGTTCGTTCCCTAGCTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: GPLPFALNCLLRPSA*DVDINKHSSFPSSP Trigger: GGGTGAGCTAGGGAACGAACTGTGCTTGTTGATATCCACATCCAAGGCTGATGGCCGGAGGAGGCAGTTAAGAGCAAAAGGCAATGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000557523.2 ENST00000655230.1 ENST00000655889.1 ENST00000658161.1 ENST00000663189.1 |
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| CDS CAA 90 bp | TTGCCCTCATGTCTTCCAGTGTCTTGTGTGCTTCAAGACCATCCGTaGCCCAGTACGGCAGAACTTGTGCCATCTCAGGGGTTCCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LPSCLPVSCVLQDHP*PSTAELVPSQGFLK Trigger: CTTCAGGAACCCCTGAGATGGCACAAGTTCTGCCGTACTGGGCAACGGATGGTCTTGAAGCACACAAGACACTGGAAGACATGAGGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS TCA 72 bp | CACACACTGCACCAAACATCTTTGATTTCTGTACTCTaGCGCTTCGACATCTGGGGCCCTGCTGACCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: HTLHQTSLISVL*RFDIWGPADPA Trigger: TGCAGGGTCAGCAGGGCCCCAGATGTCGAAGCGTCAGAGTACAGAAATCAAAGATGTTTGGTGCAGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557672.1 ENST00000656772.1 |
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| CDS CCA 72 bp | CTCTTAACTGCCTCCTCCGGCCATCAGCCTTGGATGTaGATATCAACAAGCACAGTTCGTTCCCTAGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLTASSGHQPWM*ISTSTVRSLAH Trigger: GTGAGCTAGGGAACGAACTGTGCTTGTTGATATCCACATCCAAGGCTGATGGCCGGAGGAGGCAGTTAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000557523.2 ENST00000655230.1 ENST00000655889.1 ENST00000658161.1 ENST00000663189.1 |
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| CDS CCA 72 bp | AGAAGGCCTCTGACAGCCAAGCTCTTTCCTAGGTCTTaGGAGACTAGCCCAGTCAGTGATCTTCCCTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RRPLTAKLFPRS*ETSPVSDLPFQ Trigger: TTGGAAGGGAAGATCACTGACTGGGCTAGTCTCCCAAGACCTAGGAAAGAGCTTGGCTGTCAGAGGCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663322.1 |
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| CDS CCA 72 bp | CTCGCCCAGCCAGAGAACTTGGTTAGACTCCTCACCTaGAGTCGTTTCTCCCTCCTGTTGTGTACGAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: LAQPENLVRLLT*SRFSLLLCTKC Trigger: ACATTTCGTACACAACAGGAGGGAGAAACGACTCCAGGTGAGGAGTCTAACCAAGTTCTCTGGCTGGGCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663624.1 |
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| CDS TCA 72 bp | CACACCAGCAGACACACACACTGCACCAAACATCTTTaGTTTCTGTACTCTGACGCTTCGACATCTGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HTSRHTHCTKHL*FLYSDASTSGA Trigger: GGCCCCAGATGTCGAAGCGTCAGAGTACAGAAATCAAAGATGTTTGGTGCAGTGTGTGTGTCTGCTGGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000557672.1 ENST00000656772.1 |
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| CDS TCA 72 bp | ATGGGTCAACCCAAAGCTGGAGTCTGCAGAAGTATGTaGGGAGTCCATATTCAAACACCTGGGCGGGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: MGQPKAGVCRSM*GVHIQTPGRAF Trigger: AAAGGCCCGCCCAGGTGTTTGAATATGGACTCCTCACATACTTCTGCAGACTCCAGCTTTGGGTTGACCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000557523.2 ENST00000655230.1 ENST00000655889.1 ENST00000658161.1 ENST00000663189.1 ENST00000663322.1 |
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| CDS GCA 72 bp | TGTAGCAATTGCCCTCATGTCTTCCAGTGTCTTGTGTaGTTCAAGACCATCCGTTGCCCAGTACGGCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: CSNCPHVFQCLV*FKTIRCPVRQN Trigger: GTTCTGCCGTACTGGGCAACGGATGGTCTTGAAGCACACAAGACACTGGAAGACATGAGGGCAATTGCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS CCA 72 bp | CTTTTGCTCTTAACTGCCTCCTCCGGCCATCAGCCTTaGATGTGGATATCAACAAGCACAGTTCGTTCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: LLLLTASSGHQP*MWISTSTVRSL Trigger: TAGGGAACGAACTGTGCTTGTTGATATCCACATCCAAGGCTGATGGCCGGAGGAGGCAGTTAAGAGCAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000557523.2 ENST00000655230.1 ENST00000655889.1 ENST00000658161.1 ENST00000663189.1 |
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| CDS CAA 90 bp | ACTCCTCACCTGGAGTCGTTTCTCCCTCCTGTTGTGTACGAAATGTaGCCCCAAGTACCTCAGTCTGCTAACAACCTATTCTTCATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: TPHLESFLPPVVYEM*PQVPQSANNLFFIL Trigger: CAGGATGAAGAATAGGTTGTTAGCAGACTGAGGTACTTGGGGCAACATTTCGTACACAACAGGAGGGAGAAACGACTCCAGGTGAGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663624.1 |
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| CDS CCA 72 bp | AATTTCATACAGAGAACTGGGTGCTCACAGAATTGTTaGCAGAGTCAGAGTGGATGGCTCCCGTCTTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: NFIQRTGCSQNC*QSQSGWLPSLP Trigger: AGGCAAAGACGGGAGCCATCCACTCTGACTCTGCCAACAATTCTGTGAGCACCCAGTTCTCTGTATGAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000556159.6 ENST00000655230.1 ENST00000663624.1 ENST00000665897.1 |
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| CDS CAA 90 bp | CAAGACAACCTGGAGTCGTTTCTCCCTCCTGTTGTGTACGAAATGTaGCCCCAAGTACCTCAGTCTGCTAACAACCTATTCTTCATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QDNLESFLPPVVYEM*PQVPQSANNLFFIL Trigger: CAGGATGAAGAATAGGTTGTTAGCAGACTGAGGTACTTGGGGCAACATTTCGTACACAACAGGAGGGAGAAACGACTCCAGGTTGTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000553382.2 ENST00000556213.6 ENST00000557672.1 ENST00000656772.1 ENST00000658161.1 ENST00000663189.1 ENST00000663322.1 ENST00000666709.1 ENST00000668127.1 |
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| CDS TCA 72 bp | TTCTCTCTTTCTCTCTCTCTCTGTGTGTCTCTTTCCTaGGGAAACATTTTTCTGAAGTCACGCCACCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FSLSLSLCVSLS*GNIFLKSRHPA Trigger: GGCTGGGTGGCGTGACTTCAGAAAAATGTTTCCTCAGGAAAGAGACACACAGAGAGAGAGAGAAAGAGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000556213.6 ENST00000655889.1 ENST00000656772.1 ENST00000658161.1 ENST00000662745.1 ENST00000663189.1 ENST00000663322.1 ENST00000665527.1 ENST00000668127.1 |
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| CDS TCA 72 bp | ATGGGGCAGCATTACTCGGTCCATCAGACACAAAGATaGACTCAGCAACTATACAGCCACAATGTCAACCCT | + |
|
Preference number: 6 (lower is better) Translates to: MGQHYSVHQTQR*TQQLYSHNVNP Trigger: AGGGTTGACATTGTGGCTGTATAGTTGCTGAGTTCATCTTTGTGTCTGATGGACCGAGTAATGCTGCCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663624.1 |
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| CDS GCA 72 bp | TGGAGTCGTTTCTCCCTCCTGTTGTGTACGAAATGTTaGCCCAAGTACCTCAGTCTGCTAACAACCTATTCT | + |
|
Preference number: 6 (lower is better) Translates to: WSRFSLLLCTKC*PKYLSLLTTYS Trigger: AGAATAGGTTGTTAGCAGACTGAGGTACTTGGGGCAACATTTCGTACACAACAGGAGGGAGAAACGACTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 17 transcripts: ENST00000553382.2 ENST00000556159.6 ENST00000556213.6 ENST00000557672.1 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000656772.1 ENST00000658029.1 ENST00000658161.1 ENST00000663189.1 ENST00000663322.1 ENST00000663624.1 ENST00000665527.1 ENST00000665897.1 ENST00000666709.1 ENST00000668127.1 |
||
| CDS CAA 72 bp | AAGGAATTTCATACAGAGAACTGGGTGCTCACAGAATaGTTGGCAGAGTCAGAGTGGATGGCTCCCGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: KEFHTENWVLTE*LAESEWMAPVF Trigger: AAAGACGGGAGCCATCCACTCTGACTCTGCCAACAATTCTGTGAGCACCCAGTTCTCTGTATGAAATTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000556159.6 ENST00000655230.1 ENST00000663624.1 ENST00000665897.1 |
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| CDS CCA 72 bp | GCCATTTCTGTCATATATCAAGTGTCAATGTATTCATaGGTCAGTTTCTGGATTCTCCAACCTGCGCCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AISVIYQVSMYS*VSFWILQPAPL Trigger: GAGGGGCGCAGGTTGGAGAATCCAGAAACTGACCCATGAATACATTGACACTTGATATATGACAGAAATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653113.1 ENST00000656772.1 ENST00000666709.1 ENST00000668127.1 ENST00000669086.1 |
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| CDS CAA 90 bp | ATTGTTTTTCTGGAGTCGTTTCTCCCTCCTGTTGTGTACGAAATGTaGCCCCAAGTACCTCAGTCTGCTAACAACCTATTCTTCATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: IVFLESFLPPVVYEM*PQVPQSANNLFFIL Trigger: CAGGATGAAGAATAGGTTGTTAGCAGACTGAGGTACTTGGGGCAACATTTCGTACACAACAGGAGGGAGAAACGACTCCAGAAAAACAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000556159.6 ENST00000653950.1 ENST00000655230.1 ENST00000655889.1 ENST00000658029.1 ENST00000665527.1 ENST00000665897.1 |
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| CDS CCA 72 bp | CATGAACCCCATGACTATTCAAGACTTACAGGTAGGTaGGTTCTCTCTTTCTCTCTTTCTCTCTCTCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: HEPHDYSRLTGR*VLSFSLSLSLC Trigger: ACAGAGAGAGAGAGAAAGAGAGAAAGAGAGAACCCACCTACCTGTAAGTCTTGAATAGTCATGGGGTTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658161.1 |
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| CDS CAA 72 bp | TTCTTTGCAACACCTGCTGAGATTCTGAGATGTGAATaGGCATCTTCCATATGGAGTCTTCCAGTCCATGAG | + |
|
Preference number: 6 (lower is better) Translates to: FFATPAEILRCE*ASSIWSLPVHE Trigger: CTCATGGACTGGAAGACTCCATATGGAAGATGCCAATTCACATCTCAGAATCTCAGCAGGTGTTGCAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000653113.1 ENST00000656772.1 ENST00000666709.1 ENST00000668127.1 ENST00000669086.1 |
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| CDS CCA 72 bp | ATATATCAAGTGTCAATGTATTCATGGGTCAGTTTCTaGATTCTCCAACCTGCGCCCCTCGTCTATTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: IYQVSMYSWVSF*ILQPAPLVYLS Trigger: AGACAAATAGACGAGGGGCGCAGGTTGGAGAATCCAGAAACTGACCCATGAATACATTGACACTTGATATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653113.1 ENST00000656772.1 ENST00000666709.1 ENST00000668127.1 ENST00000669086.1 |
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| CDS CAA 90 bp | ATTTTCAGGTTCTTTGCAACACCTGCTGAGATTCTGAGATGTGAATaGGCATCTTCCATATGGAGTCTTCCAGTCCATGAGCATAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: IFRFFATPAEILRCE*ASSIWSLPVHEHSV Trigger: TACACTATGCTCATGGACTGGAAGACTCCATATGGAAGATGCCAATTCACATCTCAGAATCTCAGCAGGTGTTGCAAAGAACCTGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653113.1 ENST00000656772.1 ENST00000666709.1 ENST00000668127.1 ENST00000669086.1 |
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| CDS TCA 72 bp | TTCTTAAAGCTTCTGATCAAAGTGCATGGCACCCAGTaGGAGAGACAAGCATCCATCATTGTTTTATTAAGA | + |
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Preference number: 6 (lower is better) Translates to: FLKLLIKVHGTQ*ERQASIIVLLR Trigger: TCTTAATAAAACAATGATGGATGCTTGTCTCTCTCACTGGGTGCCATGCACTTTGATCAGAAGCTTTAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653113.1 ENST00000656772.1 ENST00000666709.1 ENST00000668127.1 ENST00000669086.1 |
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