Pregenerated sensors for LINC00927 (Homo sapiens)
Ensembl gene IDs: ENSG00000259361Ensembl transcript IDs: ENST00000558244.2, ENST00000558578.1, ENST00000558913.5, ENST00000561432.1, ENST00000647752.1, ENST00000657265.1
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCCTTTCCCTGCCAGGTGACCCAGAAGGCCATGGATTCCAGACGGTaGAGCCATGCTGTGGTAGAACCTCCATCAGCCTCCATCAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: SFPCQVTQKAMDSRR*SHAVVEPPSASIRV Trigger: GACCCTGATGGAGGCTGATGGAGGTTCTACCACAGCATGGCTGCACCGTCTGGAATCCATGGCCTTCTGGGTCACCTGGCAGGGAAAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS TCA 90 bp | CAGCCATGCTGTGGTAGAACCTCCATCAGCCTCCATCAGGGTCCTTaGAAGACATGTGGAGAAGAGCCCCCTGCTGACCCCCTACTGGTC | + |
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Preference number: 5 (lower is better) Translates to: QPCCGRTSISLHQGP*KTCGEEPPADPLLV Trigger: GACCAGTAGGGGGTCAGCAGGGGGCTCTTCTCCACATGTCTTTCAAGGACCCTGATGGAGGCTGATGGAGGTTCTACCACAGCATGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS GCA 90 bp | CATTTCTATGTGTGGCAGCCGAGTCTGCAGTCAGAGAGTCTCTTCTaGATACCCAGTCCGTCCACGTGCCCTCCATCCGTGGAGTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: HFYVWQPSLQSESLF*IPSPSTCPPSVESA Trigger: AGCTGACTCCACGGATGGAGGGCACGTGGACGGACTGGGTATGCAGAAGAGACTCTCTGACTGCAGACTCGGCTGCCACACATAGAAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS CCA 90 bp | GGACCGAGGCAGTCTGAGGGTCCAGGGAGCAGACATTTCTATGTGTaGCAGCCGAGTCTGCAGTCAGAGAGTCTCTTCTGCATACCCAGT | + |
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Preference number: 5 (lower is better) Translates to: GPRQSEGPGSRHFYV*QPSLQSESLFCIPS Trigger: ACTGGGTATGCAGAAGAGACTCTCTGACTGCAGACTCGGCTGCCACACATAGAAATGTCTGCTCCCTGGACCCTCAGACTGCCTCGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS TCA 90 bp | GGCAATCCTTTCCTTTTCCAGGCCCAGGGAATACGCTGCCCAAAGTaGCGCGTTGAGGGAGGAACAAAGTTGAGGGTGGGGAGTCATGCT | + |
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Preference number: 5 (lower is better) Translates to: GNPFLFQAQGIRCPK*RVEGGTKLRVGSHA Trigger: AGCATGACTCCCCACCCTCAACTTTGTTCCTCCCTCAACGCGTCACTTTGGGCAGCGTATTCCCTGGGCCTGGAAAAGGAAAGGATTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS CCA 90 bp | CTAAGCCTCCTTTCAGTTGTAGGTGTGCCCCAGCCTCTCTGGGATTaGGACTTTGCTTCGGCCCTGGGTTTCTGTGACTCAGTAGCTAGG | + |
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Preference number: 5 (lower is better) Translates to: LSLLSVVGVPQPLWD*DFASALGFCDSVAR Trigger: CCTAGCTACTGAGTCACAGAAACCCAGGGCCGAAGCAAAGTCCCAATCCCAGAGAGGCTGGGGCACACCTACAACTGAAAGGAGGCTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000558244.2 ENST00000558578.1 ENST00000558913.5 ENST00000561432.1 ENST00000647752.1 ENST00000657265.1 |
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| CDS CCA 90 bp | AGAGTCTCTTCTGCATACCCAGTCCGTCCACGTGCCCTCCATCCGTaGAGTCAGCTGGTGTTTATCTCGTGCTTGTTATCTGCCAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: RVSSAYPVRPRALHP*SQLVFISCLLSARL Trigger: GAGCCTGGCAGATAACAAGCACGAGATAAACACCAGCTGACTCCACGGATGGAGGGCACGTGGACGGACTGGGTATGCAGAAGAGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS CCA 90 bp | TCTGTGGGACAGAATTCTGGCTGTGGCTTAGCTGAGTCCTGCTTGTaGGTGTCTCACGATGCTGCAATGAAGCTGGAGGCTGGGGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: SVGQNSGCGLAESCL*VSHDAAMKLEAGAV Trigger: TACAGCCCCAGCCTCCAGCTTCATTGCAGCATCGTGAGACACCCACAAGCAGGACTCAGCTAAGCCACAGCCAGAATTCTGTCCCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000647752.1 ENST00000657265.1 |
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| CDS TCA 90 bp | AGGGAATACGCTGCCCAAAGTGACGCGTTGAGGGAGGAACAAAGTTaGGGGTGGGGAGTCATGCTTGGTCTTCTGATGGCCGATCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: REYAAQSDALREEQS*GWGVMLGLLMADLV Trigger: TACCAGATCGGCCATCAGAAGACCAAGCATGACTCCCCACCCTCAACTTTGTTCCTCCCTCAACGCGTCACTTTGGGCAGCGTATTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS GCA 90 bp | CGTCCACGTGCCCTCCATCCGTGGAGTCAGCTGGTGTTTATCTCGTaGTTGTTATCTGCCAGGCTCCATTTTAGGGGCTCTCTCCACAAA | + |
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Preference number: 5 (lower is better) Translates to: RPRALHPWSQLVFIS*LLSARLHFRGSLHK Trigger: TTTGTGGAGAGAGCCCCTAAAATGGAGCCTGGCAGATAACAAGCACGAGATAAACACCAGCTGACTCCACGGATGGAGGGCACGTGGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS GCA 90 bp | AGTCTGCAGTCAGAGAGTCTCTTCTGCATACCCAGTCCGTCCACGTaGCCTCCATCCGTGGAGTCAGCTGGTGTTTATCTCGTGCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: SLQSESLFCIPSPST*PPSVESAGVYLVLV Trigger: AACAAGCACGAGATAAACACCAGCTGACTCCACGGATGGAGGGCACGTGGACGGACTGGGTATGCAGAAGAGACTCTCTGACTGCAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS TCA 90 bp | AGCCCATCCCATGTCCAAACCTCTGCTTGCTGCAGCAATGTGTGCTaGGTTTTCCTTAGATTGATGCGGACAGGCAGACGCCTGAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: SPSHVQTSACCSNVC*VFLRLMRTGRRLSL Trigger: GAGACTCAGGCGTCTGCCTGTCCGCATCAATCTAAGGAAAACTCAGCACACATTGCTGCAGCAAGCAGAGGTTTGGACATGGGATGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS CCA 90 bp | GGATTTCTAAGCCTCCTTTCAGTTGTAGGTGTGCCCCAGCCTCTCTaGGATTGGGACTTTGCTTCGGCCCTGGGTTTCTGTGACTCAGTA | + |
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Preference number: 5 (lower is better) Translates to: GFLSLLSVVGVPQPL*DWDFASALGFCDSV Trigger: TACTGAGTCACAGAAACCCAGGGCCGAAGCAAAGTCCCAATCCCAGAGAGGCTGGGGCACACCTACAACTGAAAGGAGGCTTAGAAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000558244.2 ENST00000558578.1 ENST00000558913.5 ENST00000561432.1 ENST00000647752.1 ENST00000657265.1 |
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| CDS GCA 90 bp | CCTCGCCCCCTGAGGACTTTGTGTCTTGAGTCTTCTTCTCTTTCCTaGATTGTCACTCTTCCCCTCTTCATGGACAGTTGCTGCCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: PRPLRTLCLESSSLS*IVTLPLFMDSCCQH Trigger: ATGCTGGCAGCAACTGTCCATGAAGAGGGGAAGAGTGACAATGCAGGAAAGAGAAGAAGACTCAAGACACAAAGTCCTCAGGGGGCGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS GCA 90 bp | GAGAGTGAAGGGAAGTCTGTGTTGTCTGTTGAATCCACTCCAGGCTaGATTGTCACTGATGCTAGTGGCCATCTGCCCATCCTCCTACTG | + |
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Preference number: 5 (lower is better) Translates to: ESEGKSVLSVESTPG*IVTDASGHLPILLL Trigger: CAGTAGGAGGATGGGCAGATGGCCACTAGCATCAGTGACAATGCAGCCTGGAGTGGATTCAACAGACAACACAGACTTCCCTTCACTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS TCA 90 bp | CCTCCATCAGGGTCCTTGAAAGACATGTGGAGAAGAGCCCCCTGCTaGCCCCCTACTGGTCATGTAAGACTTGAGCAAGAAGTGGATTTT | + |
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Preference number: 5 (lower is better) Translates to: PPSGSLKDMWRRAPC*PPTGHVRLEQEVDF Trigger: AAAATCCACTTCTTGCTCAAGTCTTACATGACCAGTAGGGGGTCAGCAGGGGGCTCTTCTCCACATGTCTTTCAAGGACCCTGATGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS TCA 90 bp | GTTGTCTTGAAGTTCTGTGGGACAGAATTCTGGCTGTGGCTTAGCTaGGTCCTGCTTGTGGGTGTCTCACGATGCTGCAATGAAGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: VVLKFCGTEFWLWLS*VLLVGVSRCCNEAG Trigger: TCCAGCTTCATTGCAGCATCGTGAGACACCCACAAGCAGGACTCAGCTAAGCCACAGCCAGAATTCTGTCCCACAGAACTTCAAGACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647752.1 ENST00000657265.1 |
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| CDS CCA 90 bp | AGCAAAGGAGTGACTCAAACTACAACTAAGCAGGAGAGCCCACTGTaGCATCCAAGCCTTGCTCTGAGGCTCAGACATCACAGTGGGATT | + |
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Preference number: 5 (lower is better) Translates to: SKGVTQTTTKQESPL*HPSLALRLRHHSGI Trigger: AATCCCACTGTGATGTCTGAGCCTCAGAGCAAGGCTTGGATGCCACAGTGGGCTCTCCTGCTTAGTTGTAGTTTGAGTCACTCCTTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS TCA 90 bp | ACTTCCTGCTGCCCACAGTGCAGCTTTCCCCTTAGCCTTGTCATCTaGGTACCTTGTCCTTGGTACCCTTCAACTCTCACTGGTTTATCT | + |
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Preference number: 5 (lower is better) Translates to: TSCCPQCSFPLSLVI*VPCPWYPSTLTGLS Trigger: AGATAAACCAGTGAGAGTTGAAGGGTACCAAGGACAAGGTACTCAGATGACAAGGCTAAGGGGAAAGCTGCACTGTGGGCAGCAGGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS CCA 90 bp | CTATATTCTATTCACTGGAAGCAAGTCACCAGGTCCAGCCCACACTaGGGAGGAGATTACATAGGATGTGAATACGAGGAGGTAGGACCC | + |
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Preference number: 5 (lower is better) Translates to: LYSIHWKQVTRSSPH*GGDYIGCEYEEVGP Trigger: GGGTCCTACCTCCTCGTATTCACATCCTATGTAATCTCCTCCCCAGTGTGGGCTGGACCTGGTGACTTGCTTCCAGTGAATAGAATATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000561432.1 ENST00000647752.1 ENST00000657265.1 |
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| CDS TCA 90 bp | GGGTCACCAAGGACCTCACAGAGGACCTTGGACACGGACTCCAAATaGGGCTTATACATAAGATGTGTTGCGTTTGTGTGTCGTTTTGGT | + |
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Preference number: 5 (lower is better) Translates to: GSPRTSQRTLDTDSK*GLYIRCVAFVCRFG Trigger: ACCAAAACGACACACAAACGCAACACATCTTATGTATAAGCCTCATTTGGAGTCCGTGTCCAAGGTCCTCTGTGAGGTCCTTGGTGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS TCA 90 bp | AGCCCTAACCAGGCTTTCTCTCAAGTCAGTTCTACCAGGAGAGAATaGGGAGGCTGCTGTCCAAAGTTTTGGGTGCTGAAACCAAATATG | + |
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Preference number: 5 (lower is better) Translates to: SPNQAFSQVSSTRRE*GGCCPKFWVLKPNM Trigger: CATATTTGGTTTCAGCACCCAAAACTTTGGACAGCAGCCTCCTCATTCTCTCCTGGTAGAACTGACTTGAGAGAAAGCCTGGTTAGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS GCA 90 bp | ATTCTGAGGTACTTCCCTCGAAGTGTCTGTCCTTTTCTGTGTGATTaGTCCTCAGTAAGTCCTGGATTCAAGCTTAGCCCTCCTGAATGG | + |
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Preference number: 5 (lower is better) Translates to: ILRYFPRSVCPFLCD*SSVSPGFKLSPPEW Trigger: CCATTCAGGAGGGCTAAGCTTGAATCCAGGACTTACTGAGGAGCAATCACACAGAAAAGGACAGACACTTCGAGGGAAGTACCTCAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS TCA 90 bp | GATGATGGATTTGGTGGCAAGAAAGGGACTCAAACTCAGGTTTCCTaGTTCCTGTTCCCGAGTACTTTCCAGGAAACATCACACAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: DDGFGGKKGTQTQVS*FLFPSTFQETSHRF Trigger: GAACCTGTGTGATGTTTCCTGGAAAGTACTCGGGAACAGGAATCAGGAAACCTGAGTTTGAGTCCCTTTCTTGCCACCAAATCCATCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS TCA 90 bp | AGACGCCTGAGTCTCTTGTGTCTTAATAGCTCAGTTATGCTTGACTaGAAAGCCTGGTCCTTGCTTCTCCCTGGTATAGCTTCTCAATGC | + |
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Preference number: 5 (lower is better) Translates to: RRLSLLCLNSSVMLD*KAWSLLLPGIASQC Trigger: GCATTGAGAAGCTATACCAGGGAGAAGCAAGGACCAGGCTTTTCAGTCAAGCATAACTGAGCTATTAAGACACAAGAGACTCAGGCGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS GCA 90 bp | ATGAATACACCTACAGACTGCACAAAGTTAGCCTCGGAGAGGTCTTaGTTGCTATTTGGAGACAATGACCTCTTCTGGCCTCTATACCTT | + |
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Preference number: 5 (lower is better) Translates to: MNTPTDCTKLASERS*LLFGDNDLFWPLYL Trigger: AAGGTATAGAGGCCAGAAGAGGTCATTGTCTCCAAATAGCAAGCAAGACCTCTCCGAGGCTAACTTTGTGCAGTCTGTAGGTGTATTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558578.1 |
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| CDS CCA 90 bp | TCTGAGGAAGTCAGAGTCTACCTGGGATCTGAGAATTCGGAGTTATaGTGTGAATATTTGCTGTTAGCTCTGATGTGGGTCCAGTTACTT | + |
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Preference number: 5 (lower is better) Translates to: SEEVRVYLGSENSEL*CEYLLLALMWVQLL Trigger: AAGTAACTGGACCCACATCAGAGCTAACAGCAAATATTCACACCATAACTCCGAATTCTCAGATCCCAGGTAGACTCTGACTTCCTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS TCA 90 bp | ATAGCTCTTATGAACTTCTCAGCTAAGAATGCATGTGCTATCCTCTaGCTTCAGTTCTCTGAGCAGCAGAGCCCAAGTCTGTCATTTGTT | + |
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Preference number: 5 (lower is better) Translates to: IALMNFSAKNACAIL*LQFSEQQSPSLSFV Trigger: AACAAATGACAGACTTGGGCTCTGCTGCTCAGAGAACTGAAGTCAGAGGATAGCACATGCATTCTTAGCTGAGAAGTTCATAAGAGCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS TCA 90 bp | AAGCCTGCTGTTTGTAAGGTAGGTTTGCTTCCACCTTTAGAGGCTTaGGAGAAGGAAGTTTGCATTCTCCTTCTGTATAATATGAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: KPAVCKVGLLPPLEA*EKEVCILLLYNMSC Trigger: ACAGCTCATATTATACAGAAGGAGAATGCAAACTTCCTTCTCTCAAGCCTCTAAAGGTGGAAGCAAACCTACCTTACAAACAGCAGGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS TCA 90 bp | CTACCAGGAGAGAATGAGGAGGCTGCTGTCCAAAGTTTTGGGTGCTaGAACCAAATATGCCTAGATCTTGGAAACCAAATATTTCTGAAT | + |
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Preference number: 5 (lower is better) Translates to: LPGENEEAAVQSFGC*NQICLDLGNQIFLN Trigger: ATTCAGAAATATTTGGTTTCCAAGATCTAGGCATATTTGGTTTCAGCACCCAAAACTTTGGACAGCAGCCTCCTCATTCTCTCCTGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS CCA 90 bp | GGGTCCTGTTGTTTGAAGTTTCAACCAAATTATATAACTTGTCATTaGCCCATTATGCTATTTCCTTTCTCTGTGAGTTGCAGCAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: GSCCLKFQPNYITCH*PIMLFPFSVSCSSS Trigger: TGAGCTGCTGCAACTCACAGAGAAAGGAAATAGCATAATGGGCCAATGACAAGTTATATAATTTGGTTGAAACTTCAAACAACAGGACCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS TCA 90 bp | AGAATGCTAGCCAAGAGGAAAGTCATAGTCATAGTCTTCTATAGCTaGATCTTGGAGGTGACATCAATCACTTTTGCTATATTCTATTCA | + |
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Preference number: 5 (lower is better) Translates to: RMLAKRKVIVIVFYS*ILEVTSITFAIFYS Trigger: TGAATAGAATATAGCAAAAGTGATTGATGTCACCTCCAAGATTCAGCTATAGAAGACTATGACTATGACTTTCCTCTTGGCTAGCATTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000561432.1 ENST00000647752.1 ENST00000657265.1 |
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| CDS CCA 72 bp | CTGAGGGTGACAGCATGGGAGTGTGCGTGGAAATGGTaGAGTGGGTTTCACGGGGGAGGGACCGAGGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: LRVTAWECAWKW*SGFHGGGTEAV Trigger: GACTGCCTCGGTCCCTCCCCCGTGAAACCCACTCCACCATTTCCACGCACACTCCCATGCTGTCACCCTCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS GCA 72 bp | GTGTGGCAGCCGAGTCTGCAGTCAGAGAGTCTCTTCTaGATACCCAGTCCGTCCACGTGCCCTCCATCCGTG | + |
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Preference number: 6 (lower is better) Translates to: VWQPSLQSESLF*IPSPSTCPPSV Trigger: CACGGATGGAGGGCACGTGGACGGACTGGGTATGCAGAAGAGACTCTCTGACTGCAGACTCGGCTGCCACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS TCA 72 bp | CCAGGCCCAGGGAATACGCTGCCCAAAGTGACGCGTTaGGGGAGGAACAAAGTTGAGGGTGGGGAGTCATGC | + |
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Preference number: 6 (lower is better) Translates to: PGPGNTLPKVTR*GRNKVEGGESC Trigger: GCATGACTCCCCACCCTCAACTTTGTTCCTCCCTCAACGCGTCACTTTGGGCAGCGTATTCCCTGGGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS GCA 72 bp | TGCCAGGTGACCCAGAAGGCCATGGATTCCAGACGGTaGAGCCATGCTGTGGTAGAACCTCCATCAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: CQVTQKAMDSRR*SHAVVEPPSAS Trigger: GGAGGCTGATGGAGGTTCTACCACAGCATGGCTGCACCGTCTGGAATCCATGGCCTTCTGGGTCACCTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS GCA 72 bp | TTCTCACCTTTCAACCACCACCTCCACGAGCTTGCCTaGCCTTGTTCCCACACGTTCTGCTCTCTGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: FSPFNHHLHELA*PCSHTFCSLAW Trigger: CCAGGCCAGAGAGCAGAACGTGTGGGAACAAGGGCAGGCAAGCTCGTGGAGGTGGTGGTTGAAAGGTGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS CAA 90 bp | CCAATTCTCACCTTTCAACCACCACCTCCACGAGCTTGCCTGCCCTaGTTCCCACACGTTCTGCTCTCTGGCCTGGTAGAAGGAGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: PILTFQPPPPRACLP*FPHVLLSGLVEGGD Trigger: GTCACCTCCTTCTACCAGGCCAGAGAGCAGAACGTGTGGGAACAAGGGCAGGCAAGCTCGTGGAGGTGGTGGTTGAAAGGTGAGAATTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS TCA 72 bp | TTCCTTTTCCAGGCCCAGGGAATACGCTGCCCAAAGTaGCGCGTTGAGGGAGGAACAAAGTTGAGGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: FLFQAQGIRCPK*RVEGGTKLRVG Trigger: CCCCACCCTCAACTTTGTTCCTCCCTCAACGCGTCACTTTGGGCAGCGTATTCCCTGGGCCTGGAAAAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS GCA 72 bp | CCAATTCTCACCTTTCAACCACCACCTCCACGAGCTTaGCTGCCCTTGTTCCCACACGTTCTGCTCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: PILTFQPPPPRA*LPLFPHVLLSG Trigger: GCCAGAGAGCAGAACGTGTGGGAACAAGGGCAGGCAAGCTCGTGGAGGTGGTGGTTGAAAGGTGAGAATTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS CAA 72 bp | ACCTTTCAACCACCACCTCCACGAGCTTGCCTGCCCTaGTTCCCACACGTTCTGCTCTCTGGCCTGGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: TFQPPPPRACLP*FPHVLLSGLVE Trigger: TTCTACCAGGCCAGAGAGCAGAACGTGTGGGAACAAGGGCAGGCAAGCTCGTGGAGGTGGTGGTTGAAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS CAA 90 bp | CCAAGCTCATGTGGTTGTAAACAGGATTTAGTTCCTTGCTGGCTGTaGGCCACAGATCACCCCCACCCAGGCCACCCTACATGGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: PSSCGCKQDLVPCWL*ATDHPHPGHPTWAS Trigger: AGAGGCCCATGTAGGGTGGCCTGGGTGGGGGTGATCTGTGGCCAACAGCCAGCAAGGAACTAAATCCTGTTTACAACCACATGAGCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000561432.1 ENST00000647752.1 ENST00000657265.1 |
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| CDS CAA 90 bp | AGTTCTGTGGGACAGAATTCTGGCTGTGGCTTAGCTGAGTCCTGCTaGTGGGTGTCTCACGATGCTGCAATGAAGCTGGAGGCTGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SSVGQNSGCGLAESC*WVSHDAAMKLEAGA Trigger: AGCCCCAGCCTCCAGCTTCATTGCAGCATCGTGAGACACCCACAAGCAGGACTCAGCTAAGCCACAGCCAGAATTCTGTCCCACAGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000647752.1 ENST00000657265.1 |
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| CDS TCA 72 bp | GTCCAGCCCACACTGGGGAGGAGATTACATAGGATGTaGATACGAGGAGGTAGGACCCATCGGTGGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: VQPTLGRRLHRM*IRGGRTHRWLS Trigger: AGACAGCCACCGATGGGTCCTACCTCCTCGTATTCACATCCTATGTAATCTCCTCCCCAGTGTGGGCTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000561432.1 ENST00000647752.1 ENST00000657265.1 |
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| CDS GCA 72 bp | TCAGAGAGTCTCTTCTGCATACCCAGTCCGTCCACGTaGCCTCCATCCGTGGAGTCAGCTGGTGTTTATCTC | + |
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Preference number: 6 (lower is better) Translates to: SESLFCIPSPST*PPSVESAGVYL Trigger: GAGATAAACACCAGCTGACTCCACGGATGGAGGGCACGTGGACGGACTGGGTATGCAGAAGAGACTCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS CCA 72 bp | CTTTCAGTTGTAGGTGTGCCCCAGCCTCTCTGGGATTaGGACTTTGCTTCGGCCCTGGGTTTCTGTGACTCA | + |
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Preference number: 6 (lower is better) Translates to: LSVVGVPQPLWD*DFASALGFCDS Trigger: TGAGTCACAGAAACCCAGGGCCGAAGCAAAGTCCCAATCCCAGAGAGGCTGGGGCACACCTACAACTGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000558244.2 ENST00000558578.1 ENST00000558913.5 ENST00000561432.1 ENST00000647752.1 ENST00000657265.1 |
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| CDS CAA 90 bp | CCACGTGCCCTCCATCCGTGGAGTCAGCTGGTGTTTATCTCGTGCTaGTTATCTGCCAGGCTCCATTTTAGGGGCTCTCTCCACAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: PRALHPWSQLVFISC*LSARLHFRGSLHKA Trigger: TGCTTTGTGGAGAGAGCCCCTAAAATGGAGCCTGGCAGATAACAAGCACGAGATAAACACCAGCTGACTCCACGGATGGAGGGCACGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS GCA 72 bp | GCTGTTAGCTCTGATGTGGGTCCAGTTACTTCCTGCTaGCCACAGTGCAGCTTTCCCCTTAGCCTTGTCATC | + |
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Preference number: 6 (lower is better) Translates to: AVSSDVGPVTSC*PQCSFPLSLVI Trigger: GATGACAAGGCTAAGGGGAAAGCTGCACTGTGGGCAGCAGGAAGTAACTGGACCCACATCAGAGCTAACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS GCA 72 bp | GTGGGACAGAATTCTGGCTGTGGCTTAGCTGAGTCCTaGTTGTGGGTGTCTCACGATGCTGCAATGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: VGQNSGCGLAES*LWVSHDAAMKL Trigger: CAGCTTCATTGCAGCATCGTGAGACACCCACAAGCAGGACTCAGCTAAGCCACAGCCAGAATTCTGTCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647752.1 ENST00000657265.1 |
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| CDS CCA 72 bp | TCTGCATACCCAGTCCGTCCACGTGCCCTCCATCCGTaGAGTCAGCTGGTGTTTATCTCGTGCTTGTTATCT | + |
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Preference number: 6 (lower is better) Translates to: SAYPVRPRALHP*SQLVFISCLLS Trigger: AGATAACAAGCACGAGATAAACACCAGCTGACTCCACGGATGGAGGGCACGTGGACGGACTGGGTATGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS CCA 72 bp | AGCTCATGTGGTTGTAAACAGGATTTAGTTCCTTGCTaGCTGTTGGCCACAGATCACCCCCACCCAGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: SSCGCKQDLVPC*LLATDHPHPGH Trigger: GTGGCCTGGGTGGGGGTGATCTGTGGCCAACAGCCAGCAAGGAACTAAATCCTGTTTACAACCACATGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000561432.1 ENST00000647752.1 ENST00000657265.1 |
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| CDS CCA 72 bp | CAGAATTCTGGCTGTGGCTTAGCTGAGTCCTGCTTGTaGGTGTCTCACGATGCTGCAATGAAGCTGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: QNSGCGLAESCL*VSHDAAMKLEA Trigger: AGCCTCCAGCTTCATTGCAGCATCGTGAGACACCCACAAGCAGGACTCAGCTAAGCCACAGCCAGAATTCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647752.1 ENST00000657265.1 |
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| CDS CAA 72 bp | TGTGGTTGTAAACAGGATTTAGTTCCTTGCTGGCTGTaGGCCACAGATCACCCCCACCCAGGCCACCCTACA | + |
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Preference number: 6 (lower is better) Translates to: CGCKQDLVPCWL*ATDHPHPGHPT Trigger: TGTAGGGTGGCCTGGGTGGGGGTGATCTGTGGCCAACAGCCAGCAAGGAACTAAATCCTGTTTACAACCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000561432.1 ENST00000647752.1 ENST00000657265.1 |
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| CDS CAA 72 bp | GGACAGAATTCTGGCTGTGGCTTAGCTGAGTCCTGCTaGTGGGTGTCTCACGATGCTGCAATGAAGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GQNSGCGLAESC*WVSHDAAMKLE Trigger: CTCCAGCTTCATTGCAGCATCGTGAGACACCCACAAGCAGGACTCAGCTAAGCCACAGCCAGAATTCTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647752.1 ENST00000657265.1 |
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| CDS TCA 72 bp | GGGTCCTTGAAAGACATGTGGAGAAGAGCCCCCTGCTaGCCCCCTACTGGTCATGTAAGACTTGAGCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: GSLKDMWRRAPC*PPTGHVRLEQE Trigger: TTCTTGCTCAAGTCTTACATGACCAGTAGGGGGTCAGCAGGGGGCTCTTCTCCACATGTCTTTCAAGGACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS GCA 72 bp | GGGAAGTCTGTGTTGTCTGTTGAATCCACTCCAGGCTaGATTGTCACTGATGCTAGTGGCCATCTGCCCATC | + |
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Preference number: 6 (lower is better) Translates to: GKSVLSVESTPG*IVTDASGHLPI Trigger: GATGGGCAGATGGCCACTAGCATCAGTGACAATGCAGCCTGGAGTGGATTCAACAGACAACACAGACTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS GCA 72 bp | TTTGCTGTTAGCTCTGATGTGGGTCCAGTTACTTCCTaGTGCCCACAGTGCAGCTTTCCCCTTAGCCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: FAVSSDVGPVTS*CPQCSFPLSLV Trigger: GACAAGGCTAAGGGGAAAGCTGCACTGTGGGCAGCAGGAAGTAACTGGACCCACATCAGAGCTAACAGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS CAA 72 bp | AGTCTGTGTTGTCTGTTGAATCCACTCCAGGCTGCATaGTCACTGATGCTAGTGGCCATCTGCCCATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SLCCLLNPLQAA*SLMLVAICPSS Trigger: GGAGGATGGGCAGATGGCCACTAGCATCAGTGACAATGCAGCCTGGAGTGGATTCAACAGACAACACAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS CAA 72 bp | CTTCCTGCTGCCCACAGTGCAGCTTTCCCCTTAGCCTaGTCATCTGAGTACCTTGTCCTTGGTACCCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: LPAAHSAAFPLA*SSEYLVLGTLQ Trigger: TTGAAGGGTACCAAGGACAAGGTACTCAGATGACAAGGCTAAGGGGAAAGCTGCACTGTGGGCAGCAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS CAA 90 bp | GTCCAGTTACTTCCTGCTGCCCACAGTGCAGCTTTCCCCTTAGCCTaGTCATCTGAGTACCTTGTCCTTGGTACCCTTCAACTCTCACTG | + |
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Preference number: 6 (lower is better) Translates to: VQLLPAAHSAAFPLA*SSEYLVLGTLQLSL Trigger: CAGTGAGAGTTGAAGGGTACCAAGGACAAGGTACTCAGATGACAAGGCTAAGGGGAAAGCTGCACTGTGGGCAGCAGGAAGTAACTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS TCA 72 bp | TGCCCACAGTGCAGCTTTCCCCTTAGCCTTGTCATCTaGGTACCTTGTCCTTGGTACCCTTCAACTCTCACT | + |
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Preference number: 6 (lower is better) Translates to: CPQCSFPLSLVI*VPCPWYPSTLT Trigger: AGTGAGAGTTGAAGGGTACCAAGGACAAGGTACTCAGATGACAAGGCTAAGGGGAAAGCTGCACTGTGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS TCA 72 bp | CATGTCCAAACCTCTGCTTGCTGCAGCAATGTGTGCTaGGTTTTCCTTAGATTGATGCGGACAGGCAGACGC | + |
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Preference number: 6 (lower is better) Translates to: HVQTSACCSNVC*VFLRLMRTGRR Trigger: GCGTCTGCCTGTCCGCATCAATCTAAGGAAAACTCAGCACACATTGCTGCAGCAAGCAGAGGTTTGGACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS TCA 72 bp | AAGTTCTGTGGGACAGAATTCTGGCTGTGGCTTAGCTaGGTCCTGCTTGTGGGTGTCTCACGATGCTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: KFCGTEFWLWLS*VLLVGVSRCCN Trigger: ATTGCAGCATCGTGAGACACCCACAAGCAGGACTCAGCTAAGCCACAGCCAGAATTCTGTCCCACAGAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647752.1 ENST00000657265.1 |
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| CDS GCA 72 bp | TCCTGCATTGTCACTCTTCCCCTCTTCATGGACAGTTaGTGCCAGCATCAAGCTGTCATGATGCTTCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SCIVTLPLFMDS*CQHQAVMMLPE Trigger: CTCAGGAAGCATCATGACAGCTTGATGCTGGCAGCAACTGTCCATGAAGAGGGGAAGAGTGACAATGCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS CCA 72 bp | ATTCACTGGAAGCAAGTCACCAGGTCCAGCCCACACTaGGGAGGAGATTACATAGGATGTGAATACGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: IHWKQVTRSSPH*GGDYIGCEYEE Trigger: CTCCTCGTATTCACATCCTATGTAATCTCCTCCCCAGTGTGGGCTGGACCTGGTGACTTGCTTCCAGTGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000561432.1 ENST00000647752.1 ENST00000657265.1 |
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| CDS CAA 90 bp | AAATTATATTCCAATTCTCACCTTTCAACCACCACCTCCACGAGCTaGCCTGCCCTTGTTCCCACACGTTCTGCTCTCTGGCCTGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: KLYSNSHLSTTTSTS*PALVPTRSALWPGR Trigger: TCTACCAGGCCAGAGAGCAGAACGTGTGGGAACAAGGGCAGGCAAGCTCGTGGAGGTGGTGGTTGAAAGGTGAGAATTGGAATATAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS TCA 72 bp | CAGGCTTTCTCTCAAGTCAGTTCTACCAGGAGAGAATaGGGAGGCTGCTGTCCAAAGTTTTGGGTGCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: QAFSQVSSTRRE*GGCCPKFWVLK Trigger: TTTCAGCACCCAAAACTTTGGACAGCAGCCTCCTCATTCTCTCCTGGTAGAACTGACTTGAGAGAAAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS TCA 72 bp | TTGTCCTTGGTACCCTTCAACTCTCACTGGTTTATCTaGGCCAGGGGCACACTCTCCTTCCTAGAATTGAGA | + |
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Preference number: 6 (lower is better) Translates to: LSLVPFNSHWFI*ARGTLSFLELR Trigger: TCTCAATTCTAGGAAGGAGAGTGTGCCCCTGGCTCAGATAAACCAGTGAGAGTTGAAGGGTACCAAGGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS CAA 72 bp | GCAGAGATGAGAGTGAAGGGAAGTCTGTGTTGTCTGTaGAATCCACTCCAGGCTGCATTGTCACTGATGCTA | + |
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Preference number: 6 (lower is better) Translates to: AEMRVKGSLCCL*NPLQAALSLML Trigger: TAGCATCAGTGACAATGCAGCCTGGAGTGGATTCAACAGACAACACAGACTTCCCTTCACTCTCATCTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS CAA 90 bp | TCCTCTGACTTCAGTTCTCTGAGCAGCAGAGCCCAAGTCTGTCATTaGTTAATGGTGTGCCCAAGGTGTTGTTACTCTAAAGGGGACACT | + |
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Preference number: 6 (lower is better) Translates to: SSDFSSLSSRAQVCH*LMVCPRCCYSKGDT Trigger: AGTGTCCCCTTTAGAGTAACAACACCTTGGGCACACCATTAACAAATGACAGACTTGGGCTCTGCTGCTCAGAGAACTGAAGTCAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS CAA 90 bp | AGAGTCTACCTGGGATCTGAGAATTCGGAGTTATGGTGTGAATATTaGCTGTTAGCTCTGATGTGGGTCCAGTTACTTCCTGCTGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: RVYLGSENSELWCEY*LLALMWVQLLPAAH Trigger: GTGGGCAGCAGGAAGTAACTGGACCCACATCAGAGCTAACAGCAAATATTCACACCATAACTCCGAATTCTCAGATCCCAGGTAGACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS CAA 90 bp | AATACACCTACAGACTGCACAAAGTTAGCCTCGGAGAGGTCTTGCTaGCTATTTGGAGACAATGACCTCTTCTGGCCTCTATACCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: NTPTDCTKLASERSC*LFGDNDLFWPLYLA Trigger: AGCAAGGTATAGAGGCCAGAAGAGGTCATTGTCTCCAAATAGCAAGCAAGACCTCTCCGAGGCTAACTTTGTGCAGTCTGTAGGTGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558578.1 |
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| CDS TCA 72 bp | ATGAACTTCTCAGCTAAGAATGCATGTGCTATCCTCTaGCTTCAGTTCTCTGAGCAGCAGAGCCCAAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: MNFSAKNACAIL*LQFSEQQSPSL Trigger: CAGACTTGGGCTCTGCTGCTCAGAGAACTGAAGTCAGAGGATAGCACATGCATTCTTAGCTGAGAAGTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS TCA 72 bp | CTTGTCATTGGCCCATTATGCTATTTCCTTTCTCTGTaGGTTGCAGCAGCTCAGGAGCTGGTTAAAGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: LVIGPLCYFLSL*VAAAQELVKGQ Trigger: TTGGCCTTTAACCAGCTCCTGAGCTGCTGCAACTCACAGAGAAAGGAAATAGCATAATGGGCCAATGACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS TCA 72 bp | AGGACCTCACAGAGGACCTTGGACACGGACTCCAAATaGGGCTTATACATAAGATGTGTTGCGTTTGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: RTSQRTLDTDSK*GLYIRCVAFVC Trigger: ACACACAAACGCAACACATCTTATGTATAAGCCTCATTTGGAGTCCGTGTCCAAGGTCCTCTGTGAGGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS GCA 72 bp | CTGAGGACTTTGTGTCTTGAGTCTTCTTCTCTTTCCTaGATTGTCACTCTTCCCCTCTTCATGGACAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: LRTLCLESSSLS*IVTLPLFMDSC Trigger: GCAACTGTCCATGAAGAGGGGAAGAGTGACAATGCAGGAAAGAGAAGAAGACTCAAGACACAAAGTCCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS GCA 72 bp | TACTTCCCTCGAAGTGTCTGTCCTTTTCTGTGTGATTaGTCCTCAGTAAGTCCTGGATTCAAGCTTAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: YFPRSVCPFLCD*SSVSPGFKLSP Trigger: AGGGCTAAGCTTGAATCCAGGACTTACTGAGGAGCAATCACACAGAAAAGGACAGACACTTCGAGGGAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS TCA 72 bp | TTTGGTGGCAAGAAAGGGACTCAAACTCAGGTTTCCTaGTTCCTGTTCCCGAGTACTTTCCAGGAAACATCA | + |
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Preference number: 6 (lower is better) Translates to: FGGKKGTQTQVS*FLFPSTFQETS Trigger: TGATGTTTCCTGGAAAGTACTCGGGAACAGGAATCAGGAAACCTGAGTTTGAGTCCCTTTCTTGCCACCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS CCA 72 bp | GTCAGAGTCTACCTGGGATCTGAGAATTCGGAGTTATaGTGTGAATATTTGCTGTTAGCTCTGATGTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VRVYLGSENSEL*CEYLLLALMWV Trigger: GACCCACATCAGAGCTAACAGCAAATATTCACACCATAACTCCGAATTCTCAGATCCCAGGTAGACTCTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS CCA 72 bp | CATCACAGTGGGATTCTGAGGAAGTCAGAGTCTACCTaGGATCTGAGAATTCGGAGTTATGGTGTGAATATT | + |
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Preference number: 6 (lower is better) Translates to: HHSGILRKSEST*DLRIRSYGVNI Trigger: AATATTCACACCATAACTCCGAATTCTCAGATCCCAGGTAGACTCTGACTTCCTCAGAATCCCACTGTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS CAA 72 bp | TTCAGTTCTCTGAGCAGCAGAGCCCAAGTCTGTCATTaGTTAATGGTGTGCCCAAGGTGTTGTTACTCTAAA | + |
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Preference number: 6 (lower is better) Translates to: FSSLSSRAQVCH*LMVCPRCCYSK Trigger: TTTAGAGTAACAACACCTTGGGCACACCATTAACAAATGACAGACTTGGGCTCTGCTGCTCAGAGAACTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS CAA 72 bp | CTGGGATCTGAGAATTCGGAGTTATGGTGTGAATATTaGCTGTTAGCTCTGATGTGGGTCCAGTTACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LGSENSELWCEY*LLALMWVQLLP Trigger: AGGAAGTAACTGGACCCACATCAGAGCTAACAGCAAATATTCACACCATAACTCCGAATTCTCAGATCCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS TCA 72 bp | GAGAATGAGGAGGCTGCTGTCCAAAGTTTTGGGTGCTaGAACCAAATATGCCTAGATCTTGGAAACCAAATA | + |
|
Preference number: 6 (lower is better) Translates to: ENEEAAVQSFGC*NQICLDLGNQI Trigger: TATTTGGTTTCCAAGATCTAGGCATATTTGGTTTCAGCACCCAAAACTTTGGACAGCAGCCTCCTCATTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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| CDS CAA 90 bp | TGGGTCCTGTTGTTTGAAGTTTCAACCAAATTATATAACTTGTCATaGGCCCATTATGCTATTTCCTTTCTCTGTGAGTTGCAGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WVLLFEVSTKLYNLS*AHYAISFLCELQQL Trigger: GAGCTGCTGCAACTCACAGAGAAAGGAAATAGCATAATGGGCCAATGACAAGTTATATAATTTGGTTGAAACTTCAAACAACAGGACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558244.2 |
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| CDS TCA 72 bp | GCCAAGAGGAAAGTCATAGTCATAGTCTTCTATAGCTaGATCTTGGAGGTGACATCAATCACTTTTGCTATA | + |
|
Preference number: 6 (lower is better) Translates to: AKRKVIVIVFYS*ILEVTSITFAI Trigger: TATAGCAAAAGTGATTGATGTCACCTCCAAGATTCAGCTATAGAAGACTATGACTATGACTTTCCTCTTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000561432.1 ENST00000647752.1 ENST00000657265.1 |
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| CDS TCA 72 bp | TTAAAGAGGTTTCCTCATGACTATATGGATATGTGGTaGGAAACAATAGGAGCAATAGTGGTTATTGATAAC | + |
|
Preference number: 6 (lower is better) Translates to: LKRFPHDYMDMW*ETIGAIVVIDN Trigger: GTTATCAATAACCACTATTGCTCCTATTGTTTCTCACCACATATCCATATAGTCATGAGGAAACCTCTTTAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647752.1 ENST00000657265.1 |
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| CDS CAA 72 bp | ACAAATAGCATGTTTCTAAGAACCCTAGAATCATTATaGTATTATGTCCAAAGGGCATCCCATGGTTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: TNSMFLRTLESL*YYVQRASHGLE Trigger: TTCTAAACCATGGGATGCCCTTTGGACATAATACAATAATGATTCTAGGGTTCTTAGAAACATGCTATTTGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000558913.5 |
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