Pregenerated sensors for LINC00921 (Homo sapiens)
Ensembl gene IDs: ENSG00000281005Ensembl transcript IDs: ENST00000572123.4, ENST00000573951.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCATCCCCGTGGGCCGCGGGCCGCCCGGAATACGACGACTCCACTTaGCGGCGCTGCTCCCGGGATACCAGCGACAACAGCGGCTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: PSPWAAGRPEYDDST*RRCSRDTSDNSGSV Trigger: GACTGAGCCGCTGTTGTCGCTGGTATCCCGGGAGCAGCGCCGGCAAGTGGAGTCGTCGTATTCCGGGCGGCCCGCGGCCCACGGGGATGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 90 bp | AACAGACGCGCCCCTGACAGTCGTGCCAGTCGCCGCCCTGGGCTTTaGGGACGTCCGAGGACGCAGCTGGCGGTTCCTCCCGCGGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: NRRAPDSRASRRPGL*GRPRTQLAVPPAVP Trigger: GGGAACCGCGGGAGGAACCGCCAGCTGCGTCCTCGGACGTCCCCAAAGCCCAGGGCGGCGACTGGCACGACTGTCAGGGGCGCGTCTGTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS GCA 90 bp | TGGGCCGCGGGCCGCCCGGAATACGACGACTCCACTTGCCGGCGCTaGTCCCGGGATACCAGCGACAACAGCGGCTCAGTCCCGGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: WAAGRPEYDDSTCRR*SRDTSDNSGSVPAN Trigger: GTTTGCCGGGACTGAGCCGCTGTTGTCGCTGGTATCCCGGGAGCAGCGCCGGCAAGTGGAGTCGTCGTATTCCGGGCGGCCCGCGGCCCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS GCA 90 bp | GGCGCTCTGGGAGATGTGTTTCTGGGAGTGTTCCGCGCATGTGCATaGGTGAGGGCGGGGCGTCGGGGTCGGGCTGGAGTGTCTGTCGCG | + |
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Preference number: 5 (lower is better) Translates to: GALGDVFLGVFRACA*VRAGRRGRAGVSVA Trigger: CGCGACAGACACTCCAGCCCGACCCCGACGCCCCGCCCTCACGCATGCACATGCGCGGAACACTCCCAGAAACACATCTCCCAGAGCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 90 bp | GTGCCAGTCGCCGCCCTGGGCTTTGGGGACGTCCGAGGACGCAGCTaGCGGTTCCTCCCGCGGTTCCCGGCACTGTTACTTCCCCGAATT | + |
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Preference number: 5 (lower is better) Translates to: VPVAALGFGDVRGRS*RFLPRFPALLLPRI Trigger: AATTCGGGGAAGTAACAGTGCCGGGAACCGCGGGAGGAACCGCCAGCTGCGTCCTCGGACGTCCCCAAAGCCCAGGGCGGCGACTGGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 90 bp | TGGGCCCCTCGGCAGAAGACGCACTTTCGGCAGAAGCCGCACTTTTaGCAGAAGCCGCCCTGGGTCCTTTCCCTCCCGCAGGCAGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: WAPRQKTHFRQKPHF*QKPPWVLSLPQAGR Trigger: CCGGCCTGCCTGCGGGAGGGAAAGGACCCAGGGCGGCTTCTGCCAAAAGTGCGGCTTCTGCCGAAAGTGCGTCTTCTGCCGAGGGGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS GCA 90 bp | TGGGAGACGTGGGCCCCCGCTAATCCGCCCTCCAATTGGCTCGCGTaGTCCCGGGGCGCTCTGGGAGATGTGTTTCTGGGAGTGTTCCGC | + |
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Preference number: 5 (lower is better) Translates to: WETWAPANPPSNWLA*SRGALGDVFLGVFR Trigger: GCGGAACACTCCCAGAAACACATCTCCCAGAGCGCCCCGGGAGCACGCGAGCCAATTGGAGGGCGGATTAGCGGGGGCCCACGTCTCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 90 bp | CCAATCAGACCAACAGAGCCGCGACTCGGAGACCTCTGGGAGACGTaGGCCCCCGCTAATCCGCCCTCCAATTGGCTCGCGTGCTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: PIRPTEPRLGDLWET*APANPPSNWLACSR Trigger: CCGGGAGCACGCGAGCCAATTGGAGGGCGGATTAGCGGGGGCCCACGTCTCCCAGAGGTCTCCGAGTCGCGGCTCTGTTGGTCTGATTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 90 bp | TTGCGGCTGCCAATCAGACCAACAGAGCCGCGACTCGGAGACCTCTaGGAGACGTGGGCCCCCGCTAATCCGCCCTCCAATTGGCTCGCG | + |
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Preference number: 5 (lower is better) Translates to: LRLPIRPTEPRLGDL*ETWAPANPPSNWLA Trigger: CGCGAGCCAATTGGAGGGCGGATTAGCGGGGGCCCACGTCTCCCAGAGGTCTCCGAGTCGCGGCTCTGTTGGTCTGATTGGCAGCCGCAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 90 bp | CGGGATACCAGCGACAACAGCGGCTCAGTCCCGGCAAACGGCGCGTaGCCCCTCCGGCGAAAAGCAGCTATAGGCTGTTGCGGCTGCCAA | + |
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Preference number: 5 (lower is better) Translates to: RDTSDNSGSVPANGA*PLRRKAAIGCCGCQ Trigger: TTGGCAGCCGCAACAGCCTATAGCTGCTTTTCGCCGGAGGGGCCACGCGCCGTTTGCCGGGACTGAGCCGCTGTTGTCGCTGGTATCCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS GCA 90 bp | GGCGCGTGGCCCCTCCGGCGAAAAGCAGCTATAGGCTGTTGCGGCTaGCAATCAGACCAACAGAGCCGCGACTCGGAGACCTCTGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: GAWPLRRKAAIGCCG*QSDQQSRDSETSGR Trigger: TCTCCCAGAGGTCTCCGAGTCGCGGCTCTGTTGGTCTGATTGGCAGCCGCAACAGCCTATAGCTGCTTTTCGCCGGAGGGGCCACGCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS GCA 90 bp | GCAAACGGCGCGTGGCCCCTCCGGCGAAAAGCAGCTATAGGCTGTTaGGGCTGCCAATCAGACCAACAGAGCCGCGACTCGGAGACCTCT | + |
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Preference number: 5 (lower is better) Translates to: ANGAWPLRRKAAIGC*GCQSDQQSRDSETS Trigger: AGAGGTCTCCGAGTCGCGGCTCTGTTGGTCTGATTGGCAGCCGCAACAGCCTATAGCTGCTTTTCGCCGGAGGGGCCACGCGCCGTTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS GCA 90 bp | CCTTGGAGCGTGGGGTGTCCACTGTGGTTCCAGCCGCAGCCCTGGTaGCCACACATGAAGATGCCCTCTGAAGACAGTAGTCTCGATGGG | + |
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Preference number: 5 (lower is better) Translates to: PWSVGCPLWFQPQPW*PHMKMPSEDSSLDG Trigger: CCCATCGAGACTACTGTCTTCAGAGGGCATCTTCATGTGTGGGCACCAGGGCTGCGGCTGGAACCACAGTGGACACCCCACGCTCCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 90 bp | CTGGTTTCTGCAGAGGATTGTCCTTGGAGCGTGGGGTGTCCACTGTaGTTCCAGCCGCAGCCCTGGTGCCCACACATGAAGATGCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LVSAEDCPWSVGCPL*FQPQPWCPHMKMPS Trigger: AGAGGGCATCTTCATGTGTGGGCACCAGGGCTGCGGCTGGAACCACAGTGGACACCCCACGCTCCAAGGACAATCCTCTGCAGAAACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 90 bp | ATTAAGAATTGTTTCCAGCTGCTGGTTTCTGCAGAGGATTGTCCTTaGAGCGTGGGGTGTCCACTGTGGTTCCAGCCGCAGCCCTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: IKNCFQLLVSAEDCP*SVGCPLWFQPQPWC Trigger: GCACCAGGGCTGCGGCTGGAACCACAGTGGACACCCCACGCTCCAAGGACAATCCTCTGCAGAAACCAGCAGCTGGAAACAATTCTTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS TCA 90 bp | ACAAAGAGGGTAGGTATATCACTTGGCCAGCGTCACACCCTGCTATaGAGCACTCACATGAGGCAACGTAAAGCACACACAATACTTAGC | + |
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Preference number: 5 (lower is better) Translates to: TKRVGISLGQRHTLL*STHMRQRKAHTILS Trigger: GCTAAGTATTGTGTGTGCTTTACGTTGCCTCATGTGAGTGCTTCATAGCAGGGTGTGACGCTGGCCAAGTGATATACCTACCCTCTTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 90 bp | TTTACAGTTGATAGAAACAGGGACAAAGAGGGTAGGTATATCACTTaGCCAGCGTCACACCCTGCTATGAAGCACTCACATGAGGCAACG | + |
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Preference number: 5 (lower is better) Translates to: FTVDRNRDKEGRYIT*PASHPAMKHSHEAT Trigger: CGTTGCCTCATGTGAGTGCTTCATAGCAGGGTGTGACGCTGGCCAAGTGATATACCTACCCTCTTTGTCCCTGTTTCTATCAACTGTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS TCA 90 bp | GTATATCACTTGGCCAGCGTCACACCCTGCTATGAAGCACTCACATaGGGCAACGTAAAGCACACACAATACTTAGCACCTATAAACTGC | + |
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Preference number: 5 (lower is better) Translates to: VYHLASVTPCYEALT*GNVKHTQYLAPINC Trigger: GCAGTTTATAGGTGCTAAGTATTGTGTGTGCTTTACGTTGCCTCATGTGAGTGCTTCATAGCAGGGTGTGACGCTGGCCAAGTGATATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS TCA 90 bp | CTTCCCCGAATTCCCAGAACAACCCATTTGATAGGAAATGGAAACTaGGAAAAATCGAGTAATTTACTCACGTCACACGGCCACCAGATA | + |
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Preference number: 5 (lower is better) Translates to: LPRIPRTTHLIGNGN*EKSSNLLTSHGHQI Trigger: TATCTGGTGGCCGTGTGACGTGAGTAAATTACTCGATTTTTCTCAGTTTCCATTTCCTATCAAATGGGTTGTTCTGGGAATTCGGGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 72 bp | GGACTCGCGCCGGTCTCCGCTCGGGCGTGGGGTCCGTaGGGCGTCGGCGGGAGGGGTCCTGGAGGAGACGGC | + |
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Preference number: 6 (lower is better) Translates to: GLAPVSARAWGP*GVGGRGPGGDG Trigger: GCCGTCTCCTCCAGGACCCCTCCCGCCGACGCCCCACGGACCCCACGCCCGAGCGGAGACCGGCGCGAGTCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS GCA 72 bp | TCCCTCCCGCAGGCAGGCCGGGACCCCGGCGGGAATTaGGTGCAGGTCGGGTCTCGCTTGACCCCAGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: SLPQAGRDPGGN*VQVGSRLTPAP Trigger: AGGCGCTGGGGTCAAGCGAGACCCGACCTGCACGCAATTCCCGCCGGGGTCCCGGCCTGCCTGCGGGAGGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CAA 72 bp | TTCCCTCCCGCAGGCAGGCCGGGACCCCGGCGGGAATaGCGTGCAGGTCGGGTCTCGCTTGACCCCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: FPPAGRPGPRRE*RAGRVSLDPSA Trigger: GGCGCTGGGGTCAAGCGAGACCCGACCTGCACGCAATTCCCGCCGGGGTCCCGGCCTGCCTGCGGGAGGGAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 72 bp | GCCCCTGACAGTCGTGCCAGTCGCCGCCCTGGGCTTTaGGGACGTCCGAGGACGCAGCTGGCGGTTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: APDSRASRRPGL*GRPRTQLAVPP Trigger: GGGAGGAACCGCCAGCTGCGTCCTCGGACGTCCCCAAAGCCCAGGGCGGCGACTGGCACGACTGTCAGGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CAA 90 bp | CCCATCCCCGTGGGCCGCGGGCCGCCCGGAATACGACGACTCCACTaGCCGGCGCTGCTCCCGGGATACCAGCGACAACAGCGGCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: PIPVGRGPPGIRRLH*PALLPGYQRQQRLS Trigger: ACTGAGCCGCTGTTGTCGCTGGTATCCCGGGAGCAGCGCCGGCAAGTGGAGTCGTCGTATTCCGGGCGGCCCGCGGCCCACGGGGATGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS GCA 72 bp | TGGGCCGCGGGCCGCCCGGAATACGACGACTCCACTTaGCGGCGCTGCTCCCGGGATACCAGCGACAACAGC | + |
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Preference number: 6 (lower is better) Translates to: WAAGRPEYDDST*RRCSRDTSDNS Trigger: GCTGTTGTCGCTGGTATCCCGGGAGCAGCGCCGGCAAGTGGAGTCGTCGTATTCCGGGCGGCCCGCGGCCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CAA 72 bp | GTGGGCCGCGGGCCGCCCGGAATACGACGACTCCACTaGCCGGCGCTGCTCCCGGGATACCAGCGACAACAG | + |
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Preference number: 6 (lower is better) Translates to: VGRGPPGIRRLH*PALLPGYQRQQ Trigger: CTGTTGTCGCTGGTATCCCGGGAGCAGCGCCGGCAAGTGGAGTCGTCGTATTCCGGGCGGCCCGCGGCCCAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CAA 90 bp | GTGGGCCCCTCGGCAGAAGACGCACTTTCGGCAGAAGCCGCACTTTaGGCAGAAGCCGCCCTGGGTCCTTTCCCTCCCGCAGGCAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: VGPSAEDALSAEAAL*AEAALGPFPPAGRP Trigger: CGGCCTGCCTGCGGGAGGGAAAGGACCCAGGGCGGCTTCTGCCAAAAGTGCGGCTTCTGCCGAAAGTGCGTCTTCTGCCGAGGGGCCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS GCA 72 bp | GGCCGCCCGGAATACGACGACTCCACTTGCCGGCGCTaGTCCCGGGATACCAGCGACAACAGCGGCTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: GRPEYDDSTCRR*SRDTSDNSGSV Trigger: GACTGAGCCGCTGTTGTCGCTGGTATCCCGGGAGCAGCGCCGGCAAGTGGAGTCGTCGTATTCCGGGCGGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 72 bp | TTTCGGCAGAAGCCGCACTTTTGGCAGAAGCCGCCCTaGGTCCTTTCCCTCCCGCAGGCAGGCCGGGACCCC | + |
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Preference number: 6 (lower is better) Translates to: FRQKPHFWQKPP*VLSLPQAGRDP Trigger: GGGGTCCCGGCCTGCCTGCGGGAGGGAAAGGACCCAGGGCGGCTTCTGCCAAAAGTGCGGCTTCTGCCGAAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS GCA 72 bp | TCTGGGAGATGTGTTTCTGGGAGTGTTCCGCGCATGTaGATGCGTGAGGGCGGGGCGTCGGGGTCGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SGRCVSGSVPRM*MREGGASGSGW Trigger: CCAGCCCGACCCCGACGCCCCGCCCTCACGCATGCACATGCGCGGAACACTCCCAGAAACACATCTCCCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS GCA 72 bp | TGGGCCCCCGCTAATCCGCCCTCCAATTGGCTCGCGTaGTCCCGGGGCGCTCTGGGAGATGTGTTTCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: WAPANPPSNWLA*SRGALGDVFLG Trigger: TCCCAGAAACACATCTCCCAGAGCGCCCCGGGAGCACGCGAGCCAATTGGAGGGCGGATTAGCGGGGGCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 72 bp | CGCCCTCCAATTGGCTCGCGTGCTCCCGGGGCGCTCTaGGAGATGTGTTTCTGGGAGTGTTCCGCGCATGTG | + |
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Preference number: 6 (lower is better) Translates to: RPPIGSRAPGAL*EMCFWECSAHV Trigger: CACATGCGCGGAACACTCCCAGAAACACATCTCCCAGAGCGCCCCGGGAGCACGCGAGCCAATTGGAGGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 72 bp | AGCGACAACAGCGGCTCAGTCCCGGCAAACGGCGCGTaGCCCCTCCGGCGAAAAGCAGCTATAGGCTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: SDNSGSVPANGA*PLRRKAAIGCC Trigger: GCAACAGCCTATAGCTGCTTTTCGCCGGAGGGGCCACGCGCCGTTTGCCGGGACTGAGCCGCTGTTGTCGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CAA 90 bp | GGCAAACGGCGCGTGGCCCCTCCGGCGAAAAGCAGCTATAGGCTGTaGCGGCTGCCAATCAGACCAACAGAGCCGCGACTCGGAGACCTC | + |
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Preference number: 6 (lower is better) Translates to: GKRRVAPPAKSSYRL*RLPIRPTEPRLGDL Trigger: GAGGTCTCCGAGTCGCGGCTCTGTTGGTCTGATTGGCAGCCGCAACAGCCTATAGCTGCTTTTCGCCGGAGGGGCCACGCGCCGTTTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS GCA 72 bp | GCGTGGCCCCTCCGGCGAAAAGCAGCTATAGGCTGTTaGGGCTGCCAATCAGACCAACAGAGCCGCGACTCG | + |
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Preference number: 6 (lower is better) Translates to: AWPLRRKAAIGC*GCQSDQQSRDS Trigger: CGAGTCGCGGCTCTGTTGGTCTGATTGGCAGCCGCAACAGCCTATAGCTGCTTTTCGCCGGAGGGGCCACGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 72 bp | CGGCAGAAGACGCACTTTCGGCAGAAGCCGCACTTTTaGCAGAAGCCGCCCTGGGTCCTTTCCCTCCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: RQKTHFRQKPHF*QKPPWVLSLPQ Trigger: CTGCGGGAGGGAAAGGACCCAGGGCGGCTTCTGCCAAAAGTGCGGCTTCTGCCGAAAGTGCGTCTTCTGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 72 bp | CCAATCAGACCAACAGAGCCGCGACTCGGAGACCTCTaGGAGACGTGGGCCCCCGCTAATCCGCCCTCCAAT | + |
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Preference number: 6 (lower is better) Translates to: PIRPTEPRLGDL*ETWAPANPPSN Trigger: ATTGGAGGGCGGATTAGCGGGGGCCCACGTCTCCCAGAGGTCTCCGAGTCGCGGCTCTGTTGGTCTGATTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CAA 72 bp | CGCGTGGCCCCTCCGGCGAAAAGCAGCTATAGGCTGTaGCGGCTGCCAATCAGACCAACAGAGCCGCGACTC | + |
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Preference number: 6 (lower is better) Translates to: RVAPPAKSSYRL*RLPIRPTEPRL Trigger: GAGTCGCGGCTCTGTTGGTCTGATTGGCAGCCGCAACAGCCTATAGCTGCTTTTCGCCGGAGGGGCCACGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS GCA 72 bp | CCCCTCCGGCGAAAAGCAGCTATAGGCTGTTGCGGCTaGCAATCAGACCAACAGAGCCGCGACTCGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: PLRRKAAIGCCG*QSDQQSRDSET Trigger: GGTCTCCGAGTCGCGGCTCTGTTGGTCTGATTGGCAGCCGCAACAGCCTATAGCTGCTTTTCGCCGGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 72 bp | GCAGAGGATTGTCCTTGGAGCGTGGGGTGTCCACTGTaGTTCCAGCCGCAGCCCTGGTGCCCACACATGAAG | + |
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Preference number: 6 (lower is better) Translates to: AEDCPWSVGCPL*FQPQPWCPHMK Trigger: CTTCATGTGTGGGCACCAGGGCTGCGGCTGGAACCACAGTGGACACCCCACGCTCCAAGGACAATCCTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CAA 72 bp | TCGGCAGAAGACGCACTTTCGGCAGAAGCCGCACTTTaGGCAGAAGCCGCCCTGGGTCCTTTCCCTCCCGCA | + |
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Preference number: 6 (lower is better) Translates to: SAEDALSAEAAL*AEAALGPFPPA Trigger: TGCGGGAGGGAAAGGACCCAGGGCGGCTTCTGCCAAAAGTGCGGCTTCTGCCGAAAGTGCGTCTTCTGCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 72 bp | AGCTGCTGGTTTCTGCAGAGGATTGTCCTTGGAGCGTaGGGTGTCCACTGTGGTTCCAGCCGCAGCCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SCWFLQRIVLGA*GVHCGSSRSPG Trigger: ACCAGGGCTGCGGCTGGAACCACAGTGGACACCCCACGCTCCAAGGACAATCCTCTGCAGAAACCAGCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CCA 72 bp | TGTTTCCAGCTGCTGGTTTCTGCAGAGGATTGTCCTTaGAGCGTGGGGTGTCCACTGTGGTTCCAGCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: CFQLLVSAEDCP*SVGCPLWFQPQ Trigger: CTGCGGCTGGAACCACAGTGGACACCCCACGCTCCAAGGACAATCCTCTGCAGAAACCAGCAGCTGGAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CAA 72 bp | TTGTTTCCAGCTGCTGGTTTCTGCAGAGGATTGTCCTaGGAGCGTGGGGTGTCCACTGTGGTTCCAGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: LFPAAGFCRGLS*ERGVSTVVPAA Trigger: TGCGGCTGGAACCACAGTGGACACCCCACGCTCCAAGGACAATCCTCTGCAGAAACCAGCAGCTGGAAACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CAA 90 bp | CGTATTTCCCACCACTTCGTGGCTTCCAGGCTCATAAACAAGAAGTaGCAAAACAGGGTGAGGCGTGGGAATGACAGCAGCACGGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RISHHFVASRLINKK*QNRVRRGNDSSTGR Trigger: CCGCCCCGTGCTGCTGTCATTCCCACGCCTCACCCTGTTTTGCAACTTCTTGTTTATGAGCCTGGAAGCCACGAAGTGGTGGGAAATACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CAA 72 bp | CACCACTTCGTGGCTTCCAGGCTCATAAACAAGAAGTaGCAAAACAGGGTGAGGCGTGGGAATGACAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: HHFVASRLINKK*QNRVRRGNDSS Trigger: GCTGCTGTCATTCCCACGCCTCACCCTGTTTTGCAACTTCTTGTTTATGAGCCTGGAAGCCACGAAGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS TCA 72 bp | GTGGGCTGCAATACAGTCACACGGCCACCAGATATTTaGATCTCGTATTTCCCACCACTTCGTGGCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: VGCNTVTRPPDI*ISYFPPLRGFQ Trigger: CTGGAAGCCACGAAGTGGTGGGAAATACGAGATTCAAATATCTGGTGGCCGTGTGACTGTATTGCAGCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572123.4 |
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| CDS TCA 72 bp | GTAGGTATATCACTTGGCCAGCGTCACACCCTGCTATaGAGCACTCACATGAGGCAACGTAAAGCACACACA | + |
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Preference number: 6 (lower is better) Translates to: VGISLGQRHTLL*STHMRQRKAHT Trigger: TGTGTGTGCTTTACGTTGCCTCATGTGAGTGCTTCATAGCAGGGTGTGACGCTGGCCAAGTGATATACCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CAA 72 bp | TGTGGGCTGCAATACAGTCACACGGCCACCAGATATTaGAATCTCGTATTTCCCACCACTTCGTGGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: CGLQYSHTATRY*NLVFPTTSWLP Trigger: TGGAAGCCACGAAGTGGTGGGAAATACGAGATTCAAATATCTGGTGGCCGTGTGACTGTATTGCAGCCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572123.4 |
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| CDS CCA 72 bp | GATAGAAACAGGGACAAAGAGGGTAGGTATATCACTTaGCCAGCGTCACACCCTGCTATGAAGCACTCACAT | + |
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Preference number: 6 (lower is better) Translates to: DRNRDKEGRYIT*PASHPAMKHSH Trigger: ATGTGAGTGCTTCATAGCAGGGTGTGACGCTGGCCAAGTGATATACCTACCCTCTTTGTCCCTGTTTCTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CAA 72 bp | CGAGTAATTTACTCACGTCACACGGCCACCAGATATTaGAATCTCGTATTTCCCACCACTTCGTGGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: RVIYSRHTATRY*NLVFPTTSWLP Trigger: TGGAAGCCACGAAGTGGTGGGAAATACGAGATTCAAATATCTGGTGGCCGTGTGACGTGAGTAAATTACTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS TCA 72 bp | ATTATAAGGGAGAAAACGGCAGTGCTGCTGTTAGGCTaGTGTATCTGTTCCTTTCACAGCTTTGGTCATAAC | + |
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Preference number: 6 (lower is better) Translates to: IIREKTAVLLLG*CICSFHSFGHN Trigger: GTTATGACCAAAGCTGTGAAAGGAACAGATACATCAGCCTAACAGCAGCACTGCCGTTTTCTCCCTTATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS TCA 72 bp | ATTCCCAGAACAACCCATTTGATAGGAAATGGAAACTaGGAAAAATCGAGTAATTTACTCACGTCACACGGC | + |
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Preference number: 6 (lower is better) Translates to: IPRTTHLIGNGN*EKSSNLLTSHG Trigger: GCCGTGTGACGTGAGTAAATTACTCGATTTTTCTCAGTTTCCATTTCCTATCAAATGGGTTGTTCTGGGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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| CDS CAA 72 bp | AATCTTCACAACAACTCTAGAACCCCCATTTTACAGTaGATAGAAACAGGGACAAAGAGGGTAGGTATATCA | + |
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Preference number: 6 (lower is better) Translates to: NLHNNSRTPILQ*IETGTKRVGIS Trigger: TGATATACCTACCCTCTTTGTCCCTGTTTCTATCAACTGTAAAATGGGGGTTCTAGAGTTGTTGTGAAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000573951.1 |
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