Pregenerated sensors for LINC00906 (Homo sapiens)
Ensembl gene IDs: ENSG00000267339Ensembl transcript IDs: ENST00000585813.6, ENST00000587998.6, ENST00000588609.1, ENST00000589466.2, ENST00000589921.1, ENST00000591285.1, ENST00000651179.1, ENST00000654199.1, ENST00000657694.1, ENST00000657984.1, ENST00000659282.1, ENST00000660056.1, ENST00000660607.1, ENST00000663381.1, ENST00000664282.1, ENST00000664775.1, ENST00000667314.1, ENST00000669456.1, ENST00000670182.1, ENST00000670624.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CACAGAAGCTGCCTTCACCCCAAGGAGCACAGCTTCTCACCTCCGTaGTCTTTCATTGCAATTCCCTGCCTTCCAGCAAGTGTCCGATGC | + |
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Preference number: 5 (lower is better) Translates to: HRSCLHPKEHSFSPP*SFIAIPCLPASVRC Trigger: GCATCGGACACTTGCTGGAAGGCAGGGAATTGCAATGAAAGAGCACGGAGGTGAGAAGCTGTGCTCCTTGGGGTGAAGGCAGCTTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000591285.1 ENST00000651179.1 ENST00000657984.1 ENST00000660056.1 |
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| CDS GCA 90 bp | CTGGTGGGATTTACCTCAAGGCTGGGGATGGACAGGCCTACAGGCTaGTCTGCTCTTATCCCACAAGCCCATGGAAGAGGACATGTAAGG | + |
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Preference number: 5 (lower is better) Translates to: LVGFTSRLGMDRPTG*SALIPQAHGRGHVR Trigger: CCTTACATGTCCTCTTCCATGGGCTTGTGGGATAAGAGCAGAGCAGCCTGTAGGCCTGTCCATCCCCAGCCTTGAGGTAAATCCCACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS CCA 90 bp | CAAATTTTCTCTTCCCCTCCGGTAGCATGCAAGCTGGCGTCACCCTaGCTTAACAGTAGATCCCAGGAGCACAGAAGCTGCCTTCACCCC | + |
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Preference number: 5 (lower is better) Translates to: QIFSSPPVACKLASP*LNSRSQEHRSCLHP Trigger: GGGGTGAAGGCAGCTTCTGTGCTCCTGGGATCTACTGTTAAGCCAGGGTGACGCCAGCTTGCATGCTACCGGAGGGGAAGAGAAAATTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000591285.1 ENST00000660056.1 |
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| CDS CCA 90 bp | GATGGACAGGCCTACAGGCTGCTCTGCTCTTATCCCACAAGCCCATaGAAGAGGACATGTAAGGATTCTACTCACAGGGCCCTGCCACCA | + |
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Preference number: 5 (lower is better) Translates to: DGQAYRLLCSYPTSP*KRTCKDSTHRALPP Trigger: TGGTGGCAGGGCCCTGTGAGTAGAATCCTTACATGTCCTCTTCCATGGGCTTGTGGGATAAGAGCAGAGCAGCCTGTAGGCCTGTCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS CCA 90 bp | TGGGTGGATCTTGTTCACTGGTGGGATTTACCTCAAGGCTGGGGATaGACAGGCCTACAGGCTGCTCTGCTCTTATCCCACAAGCCCATG | + |
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Preference number: 5 (lower is better) Translates to: WVDLVHWWDLPQGWG*TGLQAALLLSHKPM Trigger: CATGGGCTTGTGGGATAAGAGCAGAGCAGCCTGTAGGCCTGTCCATCCCCAGCCTTGAGGTAAATCCCACCAGTGAACAAGATCCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS CCA 90 bp | GGTGGATGGGTGGATCTTGTTCACTGGTGGGATTTACCTCAAGGCTaGGGATGGACAGGCCTACAGGCTGCTCTGCTCTTATCCCACAAG | + |
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Preference number: 5 (lower is better) Translates to: GGWVDLVHWWDLPQG*GWTGLQAALLLSHK Trigger: CTTGTGGGATAAGAGCAGAGCAGCCTGTAGGCCTGTCCATCCCCAGCCTTGAGGTAAATCCCACCAGTGAACAAGATCCACCCATCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS TCA 90 bp | AGGGGCTGCATCTGGTGGCAGCTTTCTTGCTGCATCACCTCTGCCTaGAAGGTAGGACTAGCAGAGAACTCCACCAAGCAGTACAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: RGCIWWQLSCCITSA*KVGLAENSTKQYSA Trigger: AGCACTGTACTGCTTGGTGGAGTTCTCTGCTAGTCCTACCTTTCAGGCAGAGGTGATGCAGCAAGAAAGCTGCCACCAGATGCAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000585813.6 ENST00000587998.6 ENST00000588609.1 ENST00000589466.2 ENST00000651179.1 ENST00000654199.1 ENST00000657694.1 ENST00000664282.1 ENST00000664775.1 ENST00000667314.1 ENST00000669456.1 ENST00000670624.1 |
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| CDS TCA 90 bp | CTCTCCTGCTGCCATGACCAAATATTTGGTCACAAGGGAAGCGGCTaGTCAGACACACTCCCAGCAAGGTCACGAGGTGCTCAGAGAACA | + |
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Preference number: 5 (lower is better) Translates to: LSCCHDQIFGHKGSG*SDTLPARSRGAQRT Trigger: TGTTCTCTGAGCACCTCGTGACCTTGCTGGGAGTGTGTCTGATCAGCCGCTTCCCTTGTGACCAAATATTTGGTCATGGCAGCAGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591285.1 |
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| CDS TCA 90 bp | CACAGAACCTGGGTTCTCATCCCAGCTCTGGCATTGGCTTGTTGTTaGCCTAGAGCGAGCCACCTAGGCTTTGTGCTTTGGTTTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: HRTWVLIPALALACC*PRASHLGFVLWFPP Trigger: AGGAGGAAACCAAAGCACAAAGCCTAGGTGGCTCGCTCTAGGTCAACAACAAGCCAATGCCAGAGCTGGGATGAGAACCCAGGTTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS GCA 90 bp | AACATTATGCGAGGCAGGCTGTCAGTGAGAGAGGCTCAAGCCTGCTaGAGGGACTGCCTCTCAGGAAAGAGAAAACAAAGCCAGAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: NIMRGRLSVREAQAC*RDCLSGKRKQSQSL Trigger: AAGGCTCTGGCTTTGTTTTCTCTTTCCTGAGAGGCAGTCCCTGCAGCAGGCTTGAGCCTCTCTCACTGACAGCCTGCCTCGCATAATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000591285.1 ENST00000657984.1 |
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| CDS GCA 90 bp | CTTAACATTATGCGAGGCAGGCTGTCAGTGAGAGAGGCTCAAGCCTaGTGCAGGGACTGCCTCTCAGGAAAGAGAAAACAAAGCCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: LNIMRGRLSVREAQA*CRDCLSGKRKQSQS Trigger: GCTCTGGCTTTGTTTTCTCTTTCCTGAGAGGCAGTCCCTGCAGCAGGCTTGAGCCTCTCTCACTGACAGCCTGCCTCGCATAATGTTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000591285.1 ENST00000657984.1 |
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| CDS GCA 90 bp | CCGTGCTCTTTCATTGCAATTCCCTGCCTTCCAGCAAGTGTCCGATaGCTGCTTAACATTATGCGAGGCAGGCTGTCAGTGAGAGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: PCSFIAIPCLPASVR*LLNIMRGRLSVREA Trigger: AGCCTCTCTCACTGACAGCCTGCCTCGCATAATGTTAAGCAGGCATCGGACACTTGCTGGAAGGCAGGGAATTGCAATGAAAGAGCACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000591285.1 ENST00000657984.1 ENST00000660056.1 |
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| CDS GCA 90 bp | GGGATTTACCTCAAGGCTGGGGATGGACAGGCCTACAGGCTGCTCTaGTCTTATCCCACAAGCCCATGGAAGAGGACATGTAAGGATTCT | + |
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Preference number: 5 (lower is better) Translates to: GIYLKAGDGQAYRLL*SYPTSPWKRTCKDS Trigger: AGAATCCTTACATGTCCTCTTCCATGGGCTTGTGGGATAAGAGCAGAGCAGCCTGTAGGCCTGTCCATCCCCAGCCTTGAGGTAAATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS TCA 90 bp | CCTTGCTCAGGATTTGAACTTGAGCCTCAGACTCTACCAAAGCTCTaGCATGTCCACAAAGAGGCTACTGGAAGGCTTCAGGCCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: PCSGFELEPQTLPKL*HVHKEATGRLQAWK Trigger: CTTCCAGGCCTGAAGCCTTCCAGTAGCCTCTTTGTGGACATGTCAGAGCTTTGGTAGAGTCTGAGGCTCAAGTTCAAATCCTGAGCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651179.1 ENST00000657984.1 |
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| CDS TCA 90 bp | GGAAGAGGACATGTAAGGATTCTACTCACAGGGCCCTGCCACCACTaGGAAGCAGATAATTCACTGTCTTGCTGCAAACTCCGTCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: GRGHVRILLTGPCHH*EADNSLSCCKLRLS Trigger: GGAGAGACGGAGTTTGCAGCAAGACAGTGAATTATCTGCTTCTCAGTGGTGGCAGGGCCCTGTGAGTAGAATCCTTACATGTCCTCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS CCA 90 bp | ATGGCCACAGTTTCTCCAGAGCTCCAGCTGGTTGCTCAAGTCATGTaGGACATCTCCAGGAAGACATGTGAAACACTGTGGCTCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: MATVSPELQLVAQVM*DISRKTCETLWLRT Trigger: TGTTCTGAGCCACAGTGTTTCACATGTCTTCCTGGAGATGTCCCACATGACTTGAGCAACCAGCTGGAGCTCTGGAGAAACTGTGGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000585813.6 ENST00000587998.6 ENST00000589921.1 ENST00000651179.1 ENST00000654199.1 ENST00000657984.1 ENST00000659282.1 ENST00000664282.1 ENST00000670182.1 ENST00000670624.1 |
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| CDS TCA 90 bp | CTCCTACTGGTCAAAGTTCATGTTACGGACCATCAATGCCTTGCATaGCCAGGTTGTGTTAATTGTGCTAACCAGCCTCCCTGTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: LLLVKVHVTDHQCLA*PGCVNCANQPPCPR Trigger: CCTGGGACAGGGAGGCTGGTTAGCACAATTAACACAACCTGGTCATGCAAGGCATTGATGGTCCGTAACATGAACTTTGACCAGTAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000585813.6 ENST00000589921.1 ENST00000651179.1 ENST00000654199.1 ENST00000657984.1 ENST00000659282.1 ENST00000670182.1 ENST00000670624.1 |
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| CDS CCA 90 bp | GGTCATATGTTACCAGGATGGCCACAGTTTCTCCAGAGCTCCAGCTaGTTGCTCAAGTCATGTGGGACATCTCCAGGAAGACATGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: GHMLPGWPQFLQSSS*LLKSCGTSPGRHVK Trigger: TTTCACATGTCTTCCTGGAGATGTCCCACATGACTTGAGCAACCAGCTGGAGCTCTGGAGAAACTGTGGCCATCCTGGTAACATATGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589921.1 ENST00000657984.1 |
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| CDS CCA 90 bp | GCCTCAGACTCTACCAAAGCTCTGACATGTCCACAAAGAGGCTACTaGAAGGCTTCAGGCCTGGAAGGGAAGTTTCTGATGAGATTCTCA | + |
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Preference number: 5 (lower is better) Translates to: ASDSTKALTCPQRGY*KASGLEGKFLMRFS Trigger: TGAGAATCTCATCAGAAACTTCCCTTCCAGGCCTGAAGCCTTCCAGTAGCCTCTTTGTGGACATGTCAGAGCTTTGGTAGAGTCTGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651179.1 ENST00000657984.1 |
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| CDS CCA 90 bp | GTGTGCCTCTTATCTTGCAAGTGTCTGCACCTGCTCATTCAGGAATaGGATTCTTCCCTTCTTCCCCCAAAAGAGAGCTCCTACCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: VCLLSCKCLHLLIQE*DSSLLPPKESSYLS Trigger: GGAAAGGTAGGAGCTCTCTTTTGGGGGAAGAAGGGAAGAATCCCATTCCTGAATGAGCAGGTGCAGACACTTGCAAGATAAGAGGCACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS GCA 90 bp | CTTAGCCATCCACCAGGCAGTTCTTCAGGTAAACATCTCTGTGTGTaGCTCTTATCTTGCAAGTGTCTGCACCTGCTCATTCAGGAATGG | + |
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Preference number: 5 (lower is better) Translates to: LSHPPGSSSGKHLCV*LLSCKCLHLLIQEW Trigger: CCATTCCTGAATGAGCAGGTGCAGACACTTGCAAGATAAGAGGCACACACAGAGATGTTTACCTGAAGAACTGCCTGGTGGATGGCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS CCA 90 bp | GCTCAAGTCATGTGGGACATCTCCAGGAAGACATGTGAAACACTGTaGCTCAGAACAGTCTGTCATAGGGGAGGAAGGCCAGATGATTTA | + |
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Preference number: 5 (lower is better) Translates to: AQVMWDISRKTCETL*LRTVCHRGGRPDDL Trigger: TAAATCATCTGGCCTTCCTCCCCTATGACAGACTGTTCTGAGCCACAGTGTTTCACATGTCTTCCTGGAGATGTCCCACATGACTTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000585813.6 ENST00000589921.1 ENST00000651179.1 ENST00000654199.1 ENST00000657984.1 ENST00000659282.1 ENST00000664282.1 ENST00000670182.1 ENST00000670624.1 |
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| CDS TCA 90 bp | TGGAGTGATTACCGAATTCACATCTGTGTCCTCCACCAAGCTGTATaGCCCCAGGAAGGCAGGGAATATGATTATTCTCTGCACCACTGT | + |
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Preference number: 5 (lower is better) Translates to: WSDYRIHICVLHQAV*PQEGREYDYSLHHC Trigger: ACAGTGGTGCAGAGAATAATCATATTCCCTGCCTTCCTGGGGTCATACAGCTTGGTGGAGGACACAGATGTGAATTCGGTAATCACTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000589921.1 ENST00000654199.1 ENST00000657984.1 ENST00000670182.1 |
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| CDS GCA 90 bp | CTTCAGGTAAACATCTCTGTGTGTGCCTCTTATCTTGCAAGTGTCTaGACCTGCTCATTCAGGAATGGGATTCTTCCCTTCTTCCCCCAA | + |
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Preference number: 5 (lower is better) Translates to: LQVNISVCASYLASV*TCSFRNGILPFFPQ Trigger: TTGGGGGAAGAAGGGAAGAATCCCATTCCTGAATGAGCAGGTGCAGACACTTGCAAGATAAGAGGCACACACAGAGATGTTTACCTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS GCA 90 bp | CCAGGCAGTTCTTCAGGTAAACATCTCTGTGTGTGCCTCTTATCTTaGAAGTGTCTGCACCTGCTCATTCAGGAATGGGATTCTTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: PGSSSGKHLCVCLLS*KCLHLLIQEWDSSL Trigger: AAGGGAAGAATCCCATTCCTGAATGAGCAGGTGCAGACACTTGCAAGATAAGAGGCACACACAGAGATGTTTACCTGAAGAACTGCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS CCA 90 bp | CTGTTTTATTTCTGGCCATTCTCTCACAAGGCTAATAGGGAGCTCTaGGTGGATGGGTGGATCTTGTTCACTGGTGGGATTTACCTCAAG | + |
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Preference number: 5 (lower is better) Translates to: LFYFWPFSHKANREL*VDGWILFTGGIYLK Trigger: CTTGAGGTAAATCCCACCAGTGAACAAGATCCACCCATCCACCCAGAGCTCCCTATTAGCCTTGTGAGAGAATGGCCAGAAATAAAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS GCA 90 bp | GTAAACATCTCTGTGTGTGCCTCTTATCTTGCAAGTGTCTGCACCTaGTCATTCAGGAATGGGATTCTTCCCTTCTTCCCCCAAAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: VNISVCASYLASVCT*SFRNGILPFFPQKR Trigger: TCTCTTTTGGGGGAAGAAGGGAAGAATCCCATTCCTGAATGAGCAGGTGCAGACACTTGCAAGATAAGAGGCACACACAGAGATGTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS CCA 90 bp | TTTGTGCTGAGATGTGTTTGGAAAACAACTCCACTCCTCTTTGTCTaGCAAACTCCTGCTCATCCTGCCAGTCTTAGCTTCAGAAAGACC | + |
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Preference number: 5 (lower is better) Translates to: FVLRCVWKTTPLLFV*QTPAHPASLSFRKT Trigger: GGTCTTTCTGAAGCTAAGACTGGCAGGATGAGCAGGAGTTTGCCAGACAAAGAGGAGTGGAGTTGTTTTCCAAACACATCTCAGCACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000585813.6 ENST00000589921.1 ENST00000651179.1 ENST00000654199.1 ENST00000657984.1 ENST00000659282.1 ENST00000660607.1 ENST00000663381.1 ENST00000664282.1 ENST00000670182.1 ENST00000670624.1 |
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| CDS CCA 90 bp | CTCCATTTGGGAGGCAGGGAGTTGCAGATAAAGATGTTTGCAGATTaGTTTCTTCTGAGGCTGCTTTTCTGGAATTGTAGATGGCCATCT | + |
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Preference number: 5 (lower is better) Translates to: LHLGGRELQIKMFAD*FLLRLLFWNCRWPS Trigger: AGATGGCCATCTACAATTCCAGAAAAGCAGCCTCAGAAGAAACCAATCTGCAAACATCTTTATCTGCAACTCCCTGCCTCCCAAATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000591285.1 ENST00000657984.1 |
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| CDS CCA 90 bp | ACCCATTTGGGAGGCAGGGAGTTGCAGATAAAGATGTTTGCAGATTaGTTTCTTCTGAGGCTGCTTTTCTGGAATTGTAGATGGCCATCT | + |
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Preference number: 5 (lower is better) Translates to: THLGGRELQIKMFAD*FLLRLLFWNCRWPS Trigger: AGATGGCCATCTACAATTCCAGAAAAGCAGCCTCAGAAGAAACCAATCTGCAAACATCTTTATCTGCAACTCCCTGCCTCCCAAATGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000651179.1 ENST00000660056.1 |
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| CDS TCA 90 bp | ACATCGTATCATCTTTCTTCATCTGTAGGAGAATATTTATTGGAGTaGTTACCGAATTCACATCTGTGTCCTCCACCAAGCTGTATGACC | + |
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Preference number: 5 (lower is better) Translates to: TSYHLSSSVGEYLLE*LPNSHLCPPPSCMT Trigger: GGTCATACAGCTTGGTGGAGGACACAGATGTGAATTCGGTAATCACTCCAATAAATATTCTCCTACAGATGAAGAAAGATGATACGATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000589921.1 ENST00000654199.1 ENST00000657984.1 ENST00000670182.1 ENST00000670624.1 |
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| CDS CAA 72 bp | TCTACACTTCTCCGGGTTTGGGACAGCAGGTGTTGTTaGAGTAGCCCTGACCCCAGGGCCAGAGGGCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: STLLRVWDSRCC*SSPDPRARGQG Trigger: TCCTTGCCCTCTGGCCCTGGGGTCAGGGCTACTCAAACAACACCTGCTGTCCCAAACCCGGAGAAGTGTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000589921.1 ENST00000654199.1 ENST00000657984.1 ENST00000659282.1 ENST00000664282.1 ENST00000670182.1 |
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| CDS TCA 72 bp | GATGCCTGCTTAACATTATGCGAGGCAGGCTGTCAGTaGGAGAGGCTCAAGCCTGCTGCAGGGACTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: DACLTLCEAGCQ*ERLKPAAGTAS Trigger: AGAGGCAGTCCCTGCAGCAGGCTTGAGCCTCTCTCACTGACAGCCTGCCTCGCATAATGTTAAGCAGGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000591285.1 ENST00000657984.1 ENST00000660056.1 |
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| CDS GCA 72 bp | CTCAAGGCTGGGGATGGACAGGCCTACAGGCTGCTCTaGTCTTATCCCACAAGCCCATGGAAGAGGACATGT | + |
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Preference number: 6 (lower is better) Translates to: LKAGDGQAYRLL*SYPTSPWKRTC Trigger: ACATGTCCTCTTCCATGGGCTTGTGGGATAAGAGCAGAGCAGCCTGTAGGCCTGTCCATCCCCAGCCTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS CCA 72 bp | GGAGCTCTGGGTGGATGGGTGGATCTTGTTCACTGGTaGGATTTACCTCAAGGCTGGGGATGGACAGGCCTA | + |
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Preference number: 6 (lower is better) Translates to: GALGGWVDLVHW*DLPQGWGWTGL Trigger: TAGGCCTGTCCATCCCCAGCCTTGAGGTAAATCCCACCAGTGAACAAGATCCACCCATCCACCCAGAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS TCA 72 bp | TGGGCTCCAGGCCTGACTCTGCCACTCTTAGCTCTGTaGCCTTTGATGAGTTACCCAACTTCTCTGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: WAPGLTLPLLAL*PLMSYPTSLGL Trigger: CAGGCCCAGAGAAGTTGGGTAACTCATCAAAGGTCACAGAGCTAAGAGTGGCAGAGTCAGGCCTGGAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000585813.6 ENST00000587998.6 ENST00000589466.2 ENST00000651179.1 ENST00000654199.1 ENST00000657694.1 ENST00000659282.1 ENST00000664282.1 ENST00000664775.1 ENST00000667314.1 ENST00000669456.1 ENST00000670182.1 ENST00000670624.1 |
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| CDS CAA 72 bp | TCCGAGATCAAGGGGCTGCATCTGGTGGCAGCTTTCTaGCTGCATCACCTCTGCCTGAAAGGTAGGACTAGC | + |
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Preference number: 6 (lower is better) Translates to: SEIKGLHLVAAF*LHHLCLKGRTS Trigger: GCTAGTCCTACCTTTCAGGCAGAGGTGATGCAGCAAGAAAGCTGCCACCAGATGCAGCCCCTTGATCTCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000585813.6 ENST00000587998.6 ENST00000588609.1 ENST00000589466.2 ENST00000651179.1 ENST00000654199.1 ENST00000657694.1 ENST00000664282.1 ENST00000664775.1 ENST00000667314.1 ENST00000669456.1 ENST00000670624.1 |
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| CDS TCA 72 bp | TGGGTTCTCATCCCAGCTCTGGCATTGGCTTGTTGTTaGCCTAGAGCGAGCCACCTAGGCTTTGTGCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: WVLIPALALACC*PRASHLGFVLW Trigger: CCAAAGCACAAAGCCTAGGTGGCTCGCTCTAGGTCAACAACAAGCCAATGCCAGAGCTGGGATGAGAACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS GCA 72 bp | CAGGATGGCCACAGTTTCTCCAGAGCTCCAGCTGGTTaGTCAAGTCATGTGGGACATCTCCAGGAAGACATG | + |
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Preference number: 6 (lower is better) Translates to: QDGHSFSRAPAG*SSHVGHLQEDM Trigger: CATGTCTTCCTGGAGATGTCCCACATGACTTGAGCAACCAGCTGGAGCTCTGGAGAAACTGTGGCCATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000585813.6 ENST00000587998.6 ENST00000589921.1 ENST00000651179.1 ENST00000654199.1 ENST00000657984.1 ENST00000659282.1 ENST00000664282.1 ENST00000670182.1 ENST00000670624.1 |
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| CDS GCA 72 bp | CTGTCAGTGAGAGAGGCTCAAGCCTGCTGCAGGGACTaGCTCTCAGGAAAGAGAAAACAAAGCCAGAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: LSVREAQACCRD*LSGKRKQSQSL Trigger: AAGGCTCTGGCTTTGTTTTCTCTTTCCTGAGAGGCAGTCCCTGCAGCAGGCTTGAGCCTCTCTCACTGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000591285.1 ENST00000657984.1 |
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| CDS CCA 72 bp | TCCTCAGGATGGCCACAGTTTCTCCAGAGCTCCAGCTaGTTGCTCAAGTCATGTGGGACATCTCCAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SSGWPQFLQSSS*LLKSCGTSPGR Trigger: TCTTCCTGGAGATGTCCCACATGACTTGAGCAACCAGCTGGAGCTCTGGAGAAACTGTGGCCATCCTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000585813.6 ENST00000587998.6 ENST00000651179.1 ENST00000654199.1 ENST00000659282.1 ENST00000664282.1 ENST00000670182.1 ENST00000670624.1 |
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| CDS CCA 72 bp | TTACCCAACTTCTCTGGGCCTGTTTCTTCCTCAGGATaGCCACAGTTTCTCCAGAGCTCCAGCTGGTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LPNFSGPVSSSG*PQFLQSSSWLL Trigger: GAGCAACCAGCTGGAGCTCTGGAGAAACTGTGGCCATCCTGAGGAAGAAACAGGCCCAGAGAAGTTGGGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000585813.6 ENST00000587998.6 ENST00000651179.1 ENST00000654199.1 ENST00000659282.1 ENST00000664282.1 ENST00000670182.1 ENST00000670624.1 |
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| CDS CCA 72 bp | ATGACAGACACAGAACCTGGGTTCTCATCCCAGCTCTaGCATTGGCTTGTTGTTGACCTAGAGCGAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: MTDTEPGFSSQL*HWLVVDLERAT Trigger: GGTGGCTCGCTCTAGGTCAACAACAAGCCAATGCCAGAGCTGGGATGAGAACCCAGGTTCTGTGTCTGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS TCA 72 bp | ATCTGGTGGCAGCTTTCTTGCTGCATCACCTCTGCCTaGAAGGTAGGACTAGCAGAGAACTCCACCAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: IWWQLSCCITSA*KVGLAENSTKQ Trigger: CTGCTTGGTGGAGTTCTCTGCTAGTCCTACCTTTCAGGCAGAGGTGATGCAGCAAGAAAGCTGCCACCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000585813.6 ENST00000587998.6 ENST00000588609.1 ENST00000589466.2 ENST00000651179.1 ENST00000654199.1 ENST00000657694.1 ENST00000664282.1 ENST00000664775.1 ENST00000667314.1 ENST00000669456.1 ENST00000670624.1 |
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| CDS TCA 72 bp | TGCCATGACCAAATATTTGGTCACAAGGGAAGCGGCTaGTCAGACACACTCCCAGCAAGGTCACGAGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: CHDQIFGHKGSG*SDTLPARSRGA Trigger: AGCACCTCGTGACCTTGCTGGGAGTGTGTCTGATCAGCCGCTTCCCTTGTGACCAAATATTTGGTCATGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591285.1 |
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| CDS GCA 72 bp | CTGTGTGTCCAAATTTTCTCTTCCCCTCCGGTAGCATaGAAGCTGGCGTCACCCTGGCTTAACAGTAGATCC | + |
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Preference number: 6 (lower is better) Translates to: LCVQIFSSPPVA*KLASPWLNSRS Trigger: GGATCTACTGTTAAGCCAGGGTGACGCCAGCTTGCATGCTACCGGAGGGGAAGAGAAAATTTGGACACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000591285.1 ENST00000660056.1 |
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| CDS CCA 72 bp | TTACCAGGATGGCCACAGTTTCTCCAGAGCTCCAGCTaGTTGCTCAAGTCATGTGGGACATCTCCAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: LPGWPQFLQSSS*LLKSCGTSPGR Trigger: TCTTCCTGGAGATGTCCCACATGACTTGAGCAACCAGCTGGAGCTCTGGAGAAACTGTGGCCATCCTGGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589921.1 ENST00000657984.1 |
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| CDS CAA 72 bp | AAGGCTAATAGGGAGCTCTGGGTGGATGGGTGGATCTaGTTCACTGGTGGGATTTACCTCAAGGCTGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: KANRELWVDGWI*FTGGIYLKAGD Trigger: ATCCCCAGCCTTGAGGTAAATCCCACCAGTGAACAAGATCCACCCATCCACCCAGAGCTCCCTATTAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS TCA 72 bp | ACTCCACCAAGCAGTACAGTGCTCAGGTTAGAAGCATaGAATTCGAAACCAGACTTCCTGGGCTCCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: TPPSSTVLRLEA*NSKPDFLGSRP Trigger: AGGCCTGGAGCCCAGGAAGTCTGGTTTCGAATTTCATGCTTCTAACCTGAGCACTGTACTGCTTGGTGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000585813.6 ENST00000587998.6 ENST00000589466.2 ENST00000651179.1 ENST00000654199.1 ENST00000657694.1 ENST00000659282.1 ENST00000664282.1 ENST00000664775.1 ENST00000667314.1 ENST00000669456.1 ENST00000670182.1 ENST00000670624.1 |
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| CDS GCA 72 bp | TTCATTGCAATTCCCTGCCTTCCAGCAAGTGTCCGATaGCTGCTTAACATTATGCGAGGCAGGCTGTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: FIAIPCLPASVR*LLNIMRGRLSV Trigger: CACTGACAGCCTGCCTCGCATAATGTTAAGCAGGCATCGGACACTTGCTGGAAGGCAGGGAATTGCAATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000591285.1 ENST00000657984.1 ENST00000660056.1 |
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| CDS CCA 72 bp | ATGTGGGACATCTCCAGGAAGACATGTGAAACACTGTaGCTCAGAACAGTCTGTCATAGGGGAGGAAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: MWDISRKTCETL*LRTVCHRGGRP Trigger: TGGCCTTCCTCCCCTATGACAGACTGTTCTGAGCCACAGTGTTTCACATGTCTTCCTGGAGATGTCCCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000585813.6 ENST00000589921.1 ENST00000651179.1 ENST00000654199.1 ENST00000657984.1 ENST00000659282.1 ENST00000664282.1 ENST00000670182.1 ENST00000670624.1 |
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| CDS CCA 72 bp | AGCCACGCAGTGTATGTTCATGACAGACACAGAACCTaGGTTCTCATCCCAGCTCTGGCATTGGCTTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SHAVYVHDRHRT*VLIPALALACC Trigger: ACAACAAGCCAATGCCAGAGCTGGGATGAGAACCCAGGTTCTGTGTCTGTCATGAACATACACTGCGTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS TCA 72 bp | TGCTCAAGTCATGTGGGACATCTCCAGGAAGACATGTaGAACACTGTGGCTCAGAACAGTCTTCTCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: CSSHVGHLQEDM*NTVAQNSLLPL Trigger: CAGAGGGAGAAGACTGTTCTGAGCCACAGTGTTTCACATGTCTTCCTGGAGATGTCCCACATGACTTGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587998.6 |
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| CDS TCA 72 bp | TCTCTGTTCTCTTCAGAGCCACGCAGTGTATGTTCATaGCAGACACAGAACCTGGGTTCTCATCCCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SLFSSEPRSVCS*QTQNLGSHPSS Trigger: AGAGCTGGGATGAGAACCCAGGTTCTGTGTCTGTCATGAACATACACTGCGTGGCTCTGAAGAGAACAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS GCA 72 bp | TCTGTGTGTGCCTCTTATCTTGCAAGTGTCTGCACCTaGTCATTCAGGAATGGGATTCTTCCCTTCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SVCASYLASVCT*SFRNGILPFFP Trigger: GGGGAAGAAGGGAAGAATCCCATTCCTGAATGAGCAGGTGCAGACACTTGCAAGATAAGAGGCACACACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS TCA 72 bp | GGATTTGAACTTGAGCCTCAGACTCTACCAAAGCTCTaGCATGTCCACAAAGAGGCTACTGGAAGGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: GFELEPQTLPKL*HVHKEATGRLQ Trigger: CTGAAGCCTTCCAGTAGCCTCTTTGTGGACATGTCAGAGCTTTGGTAGAGTCTGAGGCTCAAGTTCAAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651179.1 ENST00000657984.1 |
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| CDS TCA 72 bp | CATGTAAGGATTCTACTCACAGGGCCCTGCCACCACTaGGAAGCAGATAATTCACTGTCTTGCTGCAAACTC | + |
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Preference number: 6 (lower is better) Translates to: HVRILLTGPCHH*EADNSLSCCKL Trigger: GAGTTTGCAGCAAGACAGTGAATTATCTGCTTCTCAGTGGTGGCAGGGCCCTGTGAGTAGAATCCTTACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS GCA 72 bp | CCACCAGGCAGTTCTTCAGGTAAACATCTCTGTGTGTaGCTCTTATCTTGCAAGTGTCTGCACCTGCTCATT | + |
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Preference number: 6 (lower is better) Translates to: PPGSSSGKHLCV*LLSCKCLHLLI Trigger: AATGAGCAGGTGCAGACACTTGCAAGATAAGAGGCACACACAGAGATGTTTACCTGAAGAACTGCCTGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS CCA 72 bp | GAGAGAAAGCAAATACAAGGTCATATGTTACCAGGATaGCCACAGTTTCTCCAGAGCTCCAGCTGGTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: ERKQIQGHMLPG*PQFLQSSSWLL Trigger: GAGCAACCAGCTGGAGCTCTGGAGAAACTGTGGCCATCCTGGTAACATATGACCTTGTATTTGCTTTCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589921.1 ENST00000657984.1 |
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| CDS CCA 72 bp | TTATCTTGCAAGTGTCTGCACCTGCTCATTCAGGAATaGGATTCTTCCCTTCTTCCCCCAAAAGAGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LSCKCLHLLIQE*DSSLLPPKESS Trigger: GGAGCTCTCTTTTGGGGGAAGAAGGGAAGAATCCCATTCCTGAATGAGCAGGTGCAGACACTTGCAAGATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660056.1 |
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| CDS CAA 90 bp | TCTGTCTCCTACTGGTCAAAGTTCATGTTACGGACCATCAATGCCTaGCATGACCAGGTTGTGTTAATTGTGCTAACCAGCCTCCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: SVSYWSKFMLRTINA*HDQVVLIVLTSLPV Trigger: GACAGGGAGGCTGGTTAGCACAATTAACACAACCTGGTCATGCAAGGCATTGATGGTCCGTAACATGAACTTTGACCAGTAGGAGACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000585813.6 ENST00000589921.1 ENST00000651179.1 ENST00000654199.1 ENST00000657984.1 ENST00000659282.1 ENST00000670182.1 ENST00000670624.1 |
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| CDS TCA 72 bp | TACCGAATTCACATCTGTGTCCTCCACCAAGCTGTATaGCCCCAGGAAGGCAGGGAATATGATTATTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: YRIHICVLHQAV*PQEGREYDYSL Trigger: CAGAGAATAATCATATTCCCTGCCTTCCTGGGGTCATACAGCTTGGTGGAGGACACAGATGTGAATTCGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000589921.1 ENST00000654199.1 ENST00000657984.1 ENST00000670182.1 ENST00000670624.1 |
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| CDS TCA 72 bp | GTCAAAGTTCATGTTACGGACCATCAATGCCTTGCATaGCCAGGTTGTGTTAATTGTGCTAACCAGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: VKVHVTDHQCLA*PGCVNCANQPP Trigger: GGGAGGCTGGTTAGCACAATTAACACAACCTGGTCATGCAAGGCATTGATGGTCCGTAACATGAACTTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000585813.6 ENST00000589921.1 ENST00000651179.1 ENST00000654199.1 ENST00000657984.1 ENST00000659282.1 ENST00000670182.1 ENST00000670624.1 |
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| CDS GCA 72 bp | TATGATTATTCTCTGCACCACTGTGTCACTGGCTCCTaGCCTCTGGTTCATAATAAATGTCACACCCACCCA | + |
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Preference number: 6 (lower is better) Translates to: YDYSLHHCVTGS*PLVHNKCHTHP Trigger: TGGGTGGGTGTGACATTTATTATGAACCAGAGGGCAGGAGCCAGTGACACAGTGGTGCAGAGAATAATCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000589921.1 ENST00000654199.1 ENST00000657984.1 ENST00000670182.1 |
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| CDS GCA 72 bp | AGGGTGAATCCGGCTGAGCAGGAATATTTAAGACCTTaGTCAGGATTTGAACTTGAGCCTCAGACTCTACCA | + |
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Preference number: 6 (lower is better) Translates to: RVNPAEQEYLRP*SGFELEPQTLP Trigger: TGGTAGAGTCTGAGGCTCAAGTTCAAATCCTGAGCAAGGTCTTAAATATTCCTGCTCAGCCGGATTCACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651179.1 ENST00000657984.1 |
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| CDS CCA 72 bp | ATGTTTGCAGATTGGTTTCTTCTGAGGCTGCTTTTCTaGAATTGTAGATGGCCATCTCCTCCCTGTGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: MFADWFLLRLLF*NCRWPSPPCGF Trigger: AAAACCACAGGGAGGAGATGGCCATCTACAATTCCAGAAAAGCAGCCTCAGAAGAAACCAATCTGCAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000591285.1 ENST00000651179.1 ENST00000657984.1 ENST00000660056.1 |
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| CDS CCA 72 bp | GGAGGCAGGGAGTTGCAGATAAAGATGTTTGCAGATTaGTTTCTTCTGAGGCTGCTTTTCTGGAATTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: GGRELQIKMFAD*FLLRLLFWNCR Trigger: TCTACAATTCCAGAAAAGCAGCCTCAGAAGAAACCAATCTGCAAACATCTTTATCTGCAACTCCCTGCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000591285.1 ENST00000651179.1 ENST00000657984.1 ENST00000660056.1 |
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| CDS CAA 72 bp | GAAAGACCAGCCCAGACCCCACCATATAAGTCTCTGTaGTCCATCACATCGTATCATCTTTCTTCATCTGTA | + |
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Preference number: 6 (lower is better) Translates to: ERPAQTPPYKSL*SITSYHLSSSV Trigger: TACAGATGAAGAAAGATGATACGATGTGATGGACAACAGAGACTTATATGGTGGGGTCTGGGCTGGTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000589921.1 ENST00000654199.1 ENST00000657984.1 ENST00000670182.1 ENST00000670624.1 |
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| CDS CAA 72 bp | GAAAGACCAGCCCAGACCCCACCATATAAGTCTCTGTaGTCCATCACATCGTATCATCTTTCTTCATCCTTT | + |
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Preference number: 6 (lower is better) Translates to: ERPAQTPPYKSL*SITSYHLSSSF Trigger: AAAGGATGAAGAAAGATGATACGATGTGATGGACAACAGAGACTTATATGGTGGGGTCTGGGCTGGTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659282.1 ENST00000664282.1 |
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| CDS CAA 72 bp | GAAAGACCAGCCCAGACCCCACCATATAAGTCTCTGTaGTCCATCACATCGTATCATCTTTCTTCATCTATC | + |
|
Preference number: 6 (lower is better) Translates to: ERPAQTPPYKSL*SITSYHLSSSI Trigger: GATAGATGAAGAAAGATGATACGATGTGATGGACAACAGAGACTTATATGGTGGGGTCTGGGCTGGTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663381.1 |
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| CDS GCA 72 bp | TTAAAAATAGAGCTGTCCACTGATGGAATTCTCTCCTaGTGCCATGACCAAATATTTGGTCACAAGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: LKIELSTDGILS*CHDQIFGHKGS Trigger: GCTTCCCTTGTGACCAAATATTTGGTCATGGCAGCAGGAGAGAATTCCATCAGTGGACAGCTCTATTTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591285.1 |
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| CDS CAA 72 bp | CTTTCTGTCTCTTTACTCCATTTGGGAGGCAGGGAGTaGCAGATAAAGATGTTTGCAGATTGGTTTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LSVSLLHLGGRE*QIKMFADWFLL Trigger: CAGAAGAAACCAATCTGCAAACATCTTTATCTGCAACTCCCTGCCTCCCAAATGGAGTAAAGAGACAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591285.1 ENST00000657984.1 |
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| CDS CAA 90 bp | TTAGCTTCAGAAAGACCAGCCCAGACCCCACCATATAAGTCTCTGTaGTCCATCACATCGTATCATCTTTCTTCATCTGTAGGAGAATAT | + |
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Preference number: 6 (lower is better) Translates to: LASERPAQTPPYKSL*SITSYHLSSSVGEY Trigger: ATATTCTCCTACAGATGAAGAAAGATGATACGATGTGATGGACAACAGAGACTTATATGGTGGGGTCTGGGCTGGTCTTTCTGAAGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000589921.1 ENST00000654199.1 ENST00000657984.1 ENST00000670182.1 ENST00000670624.1 |
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| CDS CAA 90 bp | ACAATTCTCCCTCCTCTGATATTTTTCCGTTCTACGCTGGTCTTCTaGGAAATTCATTCCCTTTCTGTCTCTTTACTCCCACGGATGAAA | + |
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Preference number: 6 (lower is better) Translates to: TILPPLIFFRSTLVF*EIHSLSVSLLPRMK Trigger: TTTCATCCGTGGGAGTAAAGAGACAGAAAGGGAATGAATTTCCAAGAAGACCAGCGTAGAACGGAAAAATATCAGAGGAGGGAGAATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000651179.1 ENST00000660056.1 |
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| CDS TCA 72 bp | CATCTTTCTTCATCTGTAGGAGAATATTTATTGGAGTaGTTACCGAATTCACATCTGTGTCCTCCACCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: HLSSSVGEYLLE*LPNSHLCPPPS Trigger: GCTTGGTGGAGGACACAGATGTGAATTCGGTAATCACTCCAATAAATATTCTCCTACAGATGAAGAAAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000589921.1 ENST00000654199.1 ENST00000657984.1 ENST00000670182.1 ENST00000670624.1 |
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| CDS CAA 72 bp | TTTTCGATGTTGTTGTTTTTGAAGAATCTAGACCTTTaGTCCTGGAGAGTGTCCAACAATCTGAATTTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: FSMLLFLKNLDL*SWRVSNNLNFV Trigger: CACGAAATTCAGATTGTTGGACACTCTCCAGGACAAAAGGTCTAGATTCTTCAAAAACAACAACATCGAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000587998.6 ENST00000589466.2 ENST00000589921.1 ENST00000657694.1 ENST00000659282.1 ENST00000660607.1 ENST00000664775.1 ENST00000667314.1 |
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| CDS CCA 72 bp | ATGTTGTTGTTTTTGAAGAATCTAGACCTTTTGTCCTaGAGAGTGTCCAACAATCTGAATTTCGTGAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: MLLFLKNLDLLS*RVSNNLNFVNF Trigger: AAAATTCACGAAATTCAGATTGTTGGACACTCTCCAGGACAAAAGGTCTAGATTCTTCAAAAACAACAACAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000587998.6 ENST00000589466.2 ENST00000589921.1 ENST00000657694.1 ENST00000659282.1 ENST00000660607.1 ENST00000664775.1 ENST00000667314.1 |
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