Pregenerated sensors for LINC00905 (Homo sapiens)
Ensembl gene IDs: ENSG00000167459Ensembl transcript IDs: ENST00000397365.7, ENST00000588117.7, ENST00000588838.6, ENST00000589071.4, ENST00000602814.1, ENST00000654054.1, ENST00000654066.1, ENST00000654208.1, ENST00000654675.1, ENST00000654929.1, ENST00000655400.1, ENST00000656142.1, ENST00000657571.1, ENST00000658008.1, ENST00000658373.1, ENST00000658675.1, ENST00000659441.1, ENST00000659686.1, ENST00000661797.1, ENST00000662032.1, ENST00000662052.1, ENST00000662221.1, ENST00000662251.1, ENST00000662482.1, ENST00000662714.1, ENST00000662860.1, ENST00000664035.1, ENST00000664254.1, ENST00000665134.1, ENST00000666507.1, ENST00000667744.1, ENST00000668027.1, ENST00000669042.1, ENST00000669672.1, ENST00000669964.1, ENST00000671363.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGCCTGTTGGCGTTCGCGGGTTGCCAGCTTCTTCAGGTCCAAGCCTaGGCTGGAGCTCGACGGCTCCCTGGGTCCCCACGTGGGCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: CLLAFAGCQLLQVQA*AGARRLPGSPRGQE Trigger: CTCCTGCCCACGTGGGGACCCAGGGAGCCGTCGAGCTCCAGCCCAGGCTTGGACCTGAAGAAGCTGGCAACCCGCGAACGCCAACAGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000588117.7 ENST00000588838.6 ENST00000654929.1 ENST00000656142.1 ENST00000658008.1 ENST00000658373.1 ENST00000658675.1 ENST00000659686.1 ENST00000662052.1 ENST00000662221.1 ENST00000662251.1 ENST00000662482.1 ENST00000664035.1 ENST00000665134.1 ENST00000671363.1 |
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| CDS GCA 90 bp | AGTGCAAGTGGTCTGCAACCCTGGACTGGCCCAGCGCGCCATGGCTaGCCCTGTGCCTTGACCCACTGTGCCATGGCCATTGTACCACCC | + |
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Preference number: 5 (lower is better) Translates to: SASGLQPWTGPARHG*PCALTHCAMAIVPP Trigger: GGGTGGTACAATGGCCATGGCACAGTGGGTCAAGGCACAGGGGCAGCCATGGCGCGCTGGGCCAGTCCAGGGTTGCAGACCACTTGCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000589071.4 ENST00000654054.1 ENST00000654066.1 ENST00000654675.1 ENST00000655400.1 ENST00000657571.1 ENST00000659441.1 ENST00000661797.1 ENST00000662714.1 ENST00000662860.1 ENST00000664254.1 ENST00000666507.1 ENST00000667744.1 ENST00000668027.1 ENST00000669042.1 ENST00000669964.1 |
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| CDS CCA 90 bp | CTGCAGTGCAAGTGGTCTGCAACCCTGGACTGGCCCAGCGCGCCATaGCTGCCCCTGTGCCTTGACCCACTGTGCCATGGCCATTGTACC | + |
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Preference number: 5 (lower is better) Translates to: LQCKWSATLDWPSAP*LPLCLDPLCHGHCT Trigger: GGTACAATGGCCATGGCACAGTGGGTCAAGGCACAGGGGCAGCCATGGCGCGCTGGGCCAGTCCAGGGTTGCAGACCACTTGCACTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000589071.4 ENST00000654054.1 ENST00000654066.1 ENST00000654675.1 ENST00000655400.1 ENST00000657571.1 ENST00000659441.1 ENST00000661797.1 ENST00000662714.1 ENST00000662860.1 ENST00000664254.1 ENST00000666507.1 ENST00000667744.1 ENST00000668027.1 ENST00000669042.1 ENST00000669964.1 |
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| CDS GCA 90 bp | TCGCAGGGGCTCATGGCCTCAGCAACCCTGGCCTTATATCTGCAGTaGAAGTGGTCTGCAACCCTGGACTGGCCCAGCGCGCCATGGCTG | + |
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Preference number: 5 (lower is better) Translates to: SQGLMASATLALYLQ*KWSATLDWPSAPWL Trigger: CAGCCATGGCGCGCTGGGCCAGTCCAGGGTTGCAGACCACTTGCACTGCAGATATAAGGCCAGGGTTGCTGAGGCCATGAGCCCCTGCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000589071.4 ENST00000654054.1 ENST00000654066.1 ENST00000654675.1 ENST00000655400.1 ENST00000657571.1 ENST00000659441.1 ENST00000661797.1 ENST00000662714.1 ENST00000662860.1 ENST00000664254.1 ENST00000666507.1 ENST00000667744.1 ENST00000668027.1 ENST00000669042.1 ENST00000669964.1 |
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| CDS CCA 90 bp | ACCCTGGCCTTATATCTGCAGTGCAAGTGGTCTGCAACCCTGGACTaGCCCAGCGCGCCATGGCTGCCCCTGTGCCTTGACCCACTGTGC | + |
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Preference number: 5 (lower is better) Translates to: TLALYLQCKWSATLD*PSAPWLPLCLDPLC Trigger: GCACAGTGGGTCAAGGCACAGGGGCAGCCATGGCGCGCTGGGCCAGTCCAGGGTTGCAGACCACTTGCACTGCAGATATAAGGCCAGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000589071.4 ENST00000654054.1 ENST00000654066.1 ENST00000654675.1 ENST00000655400.1 ENST00000657571.1 ENST00000659441.1 ENST00000661797.1 ENST00000662714.1 ENST00000662860.1 ENST00000664254.1 ENST00000666507.1 ENST00000667744.1 ENST00000668027.1 ENST00000669042.1 ENST00000669964.1 |
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| CDS CCA 90 bp | CAGCAACCCTGGCCTTATATCTGCAGTGCAAGTGGTCTGCAACCCTaGACTGGCCCAGCGCGCCATGGCTGCCCCTGTGCCTTGACCCAC | + |
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Preference number: 5 (lower is better) Translates to: QQPWPYICSASGLQP*TGPARHGCPCALTH Trigger: GTGGGTCAAGGCACAGGGGCAGCCATGGCGCGCTGGGCCAGTCCAGGGTTGCAGACCACTTGCACTGCAGATATAAGGCCAGGGTTGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000589071.4 ENST00000654054.1 ENST00000654066.1 ENST00000654675.1 ENST00000655400.1 ENST00000657571.1 ENST00000659441.1 ENST00000661797.1 ENST00000662714.1 ENST00000662860.1 ENST00000664254.1 ENST00000666507.1 ENST00000667744.1 ENST00000668027.1 ENST00000669042.1 ENST00000669964.1 |
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| CDS GCA 90 bp | CTGACTCGCAGGGGCTCATGGCCTCAGCAACCCTGGCCTTATATCTaGAGTGCAAGTGGTCTGCAACCCTGGACTGGCCCAGCGCGCCAT | + |
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Preference number: 5 (lower is better) Translates to: LTRRGSWPQQPWPYI*SASGLQPWTGPARH Trigger: ATGGCGCGCTGGGCCAGTCCAGGGTTGCAGACCACTTGCACTGCAGATATAAGGCCAGGGTTGCTGAGGCCATGAGCCCCTGCGAGTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000589071.4 ENST00000654054.1 ENST00000654066.1 ENST00000654675.1 ENST00000655400.1 ENST00000657571.1 ENST00000659441.1 ENST00000661797.1 ENST00000662714.1 ENST00000662860.1 ENST00000664254.1 ENST00000666507.1 ENST00000667744.1 ENST00000668027.1 ENST00000669042.1 ENST00000669964.1 |
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| CDS CCA 90 bp | TGCCTGTTGGCGTTCGCGGGTTGCCAGCTTCTTCAGGTCCAAGCCTaGGCCAGGACCCCAATGACCAGGCCTCACTATCCAGGACCCACT | + |
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Preference number: 5 (lower is better) Translates to: CLLAFAGCQLLQVQA*ARTPMTRPHYPGPT Trigger: AGTGGGTCCTGGATAGTGAGGCCTGGTCATTGGGGTCCTGGCCCAGGCTTGGACCTGAAGAAGCTGGCAACCCGCGAACGCCAACAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654208.1 |
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| CDS CCA 90 bp | ACGCACCCTGCGAGGGTGGAGAACCAGCCCAGCCCCAAAGTGAGGTaGCAGAAAAACGAACTCACGGCCAAGGACTGGCTGAGGTTAGCC | + |
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Preference number: 5 (lower is better) Translates to: THPARVENQPSPKVR*QKNELTAKDWLRLA Trigger: GGCTAACCTCAGCCAGTCCTTGGCCGTGAGTTCGTTTTTCTGCCACCTCACTTTGGGGCTGGGCTGGTTCTCCACCCTCGCAGGGTGCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENST00000588117.7 ENST00000588838.6 ENST00000654208.1 ENST00000654929.1 ENST00000656142.1 ENST00000658008.1 ENST00000658373.1 ENST00000658675.1 ENST00000659686.1 ENST00000662052.1 ENST00000664035.1 ENST00000665134.1 ENST00000671363.1 |
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| CDS CCA 90 bp | GGACATCAAGGGCTGACTCGCAGGGGCTCATGGCCTCAGCAACCCTaGCCTTATATCTGCAGTGCAAGTGGTCTGCAACCCTGGACTGGC | + |
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Preference number: 5 (lower is better) Translates to: GHQGLTRRGSWPQQP*PYICSASGLQPWTG Trigger: GCCAGTCCAGGGTTGCAGACCACTTGCACTGCAGATATAAGGCCAGGGTTGCTGAGGCCATGAGCCCCTGCGAGTCAGCCCTTGATGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000589071.4 ENST00000654054.1 ENST00000654066.1 ENST00000654675.1 ENST00000655400.1 ENST00000657571.1 ENST00000659441.1 ENST00000661797.1 ENST00000662714.1 ENST00000662860.1 ENST00000664254.1 ENST00000666507.1 ENST00000667744.1 ENST00000668027.1 ENST00000669042.1 ENST00000669964.1 |
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| CDS TCA 72 bp | CCTAGGAGGGGAGGTGACTCCGCGGCGTCCCGGGAATaGTCCTCGCGGAGCTCGCGAGGTACTAGCGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: PRRGGDSAASRE*SSRSSRGTSAP Trigger: GGGGGCGCTAGTACCTCGCGAGCTCCGCGAGGATCATTCCCGGGACGCCGCGGAGTCACCTCCCCTCCTAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000588117.7 ENST00000588838.6 ENST00000654208.1 ENST00000654929.1 ENST00000656142.1 ENST00000658008.1 ENST00000658373.1 ENST00000658675.1 ENST00000659686.1 ENST00000662052.1 ENST00000664035.1 ENST00000665134.1 ENST00000671363.1 |
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| CDS CCA 72 bp | CGCGGGTTGCCAGCTTCTTCAGGTCCAAGCCTGGGCTaGAGCTCGACGGCTCCCTGGGTCCCCACGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: RGLPASSGPSLG*SSTAPWVPTWA Trigger: TGCCCACGTGGGGACCCAGGGAGCCGTCGAGCTCCAGCCCAGGCTTGGACCTGAAGAAGCTGGCAACCCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000588117.7 ENST00000588838.6 ENST00000654929.1 ENST00000656142.1 ENST00000658008.1 ENST00000658373.1 ENST00000658675.1 ENST00000659686.1 ENST00000662052.1 ENST00000662221.1 ENST00000662251.1 ENST00000662482.1 ENST00000664035.1 ENST00000665134.1 ENST00000671363.1 |
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| CDS CCA 72 bp | GCGTTCGCGGGTTGCCAGCTTCTTCAGGTCCAAGCCTaGGCTGGAGCTCGACGGCTCCCTGGGTCCCCACGT | + |
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Preference number: 6 (lower is better) Translates to: AFAGCQLLQVQA*AGARRLPGSPR Trigger: ACGTGGGGACCCAGGGAGCCGTCGAGCTCCAGCCCAGGCTTGGACCTGAAGAAGCTGGCAACCCGCGAACGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000588117.7 ENST00000588838.6 ENST00000654929.1 ENST00000656142.1 ENST00000658008.1 ENST00000658373.1 ENST00000658675.1 ENST00000659686.1 ENST00000662052.1 ENST00000662221.1 ENST00000662251.1 ENST00000662482.1 ENST00000664035.1 ENST00000665134.1 ENST00000671363.1 |
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| CDS GCA 72 bp | GGTCTGCAACCCTGGACTGGCCCAGCGCGCCATGGCTaGCCCTGTGCCTTGACCCACTGTGCCATGGCCATT | + |
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Preference number: 6 (lower is better) Translates to: GLQPWTGPARHG*PCALTHCAMAI Trigger: AATGGCCATGGCACAGTGGGTCAAGGCACAGGGGCAGCCATGGCGCGCTGGGCCAGTCCAGGGTTGCAGACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 17 transcripts: ENST00000589071.4 ENST00000654054.1 ENST00000654066.1 ENST00000654675.1 ENST00000655400.1 ENST00000657571.1 ENST00000659441.1 ENST00000661797.1 ENST00000662714.1 ENST00000662860.1 ENST00000664254.1 ENST00000666507.1 ENST00000667744.1 ENST00000668027.1 ENST00000669042.1 ENST00000669672.1 ENST00000669964.1 |
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| CDS GCA 72 bp | GCTTGGCGAGGCGTTGGGCTTTCTCCTGCAAGCTGGTaGACGGCGCGACAAGCCCTTGAACCGGCTGGATGC | + |
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Preference number: 6 (lower is better) Translates to: AWRGVGLSPASW*TARQALEPAGC Trigger: GCATCCAGCCGGTTCAAGGGCTTGTCGCGCCGTGCACCAGCTTGCAGGAGAAAGCCCAACGCCTCGCCAAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 31 transcripts: ENST00000588117.7 ENST00000588838.6 ENST00000589071.4 ENST00000654054.1 ENST00000654066.1 ENST00000654675.1 ENST00000654929.1 ENST00000656142.1 ENST00000657571.1 ENST00000658008.1 ENST00000658373.1 ENST00000658675.1 ENST00000659441.1 ENST00000659686.1 ENST00000661797.1 ENST00000662052.1 ENST00000662221.1 ENST00000662251.1 ENST00000662482.1 ENST00000662714.1 ENST00000662860.1 ENST00000664035.1 ENST00000664254.1 ENST00000665134.1 ENST00000666507.1 ENST00000667744.1 ENST00000668027.1 ENST00000669042.1 ENST00000669672.1 ENST00000669964.1 ENST00000671363.1 |
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| CDS GCA 72 bp | GGCGAGGCGTTGGGCTCTACTTCTCCTGCAAGCTGGTaGACGGCGCGACAAGCCCTTGAACCGGCTGGATGC | + |
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Preference number: 6 (lower is better) Translates to: GEALGSTSPASW*TARQALEPAGC Trigger: GCATCCAGCCGGTTCAAGGGCTTGTCGCGCCGTGCACCAGCTTGCAGGAGAAGTAGAGCCCAACGCCTCGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655400.1 |
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| CDS GCA 72 bp | AGCGCGCCATGGCTGCCCCTGTGCCTTGACCCACTGTaGCATGGCCATTGTACCACCCAGAGGTTTCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: SAPWLPLCLDPL*HGHCTTQRFQG Trigger: GCCTTGAAACCTCTGGGTGGTACAATGGCCATGGCACAGTGGGTCAAGGCACAGGGGCAGCCATGGCGCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000589071.4 ENST00000654054.1 ENST00000654066.1 ENST00000654675.1 ENST00000655400.1 ENST00000657571.1 ENST00000659441.1 ENST00000661797.1 ENST00000662714.1 ENST00000662860.1 ENST00000664254.1 ENST00000666507.1 ENST00000667744.1 ENST00000668027.1 ENST00000669042.1 ENST00000669672.1 ENST00000669964.1 |
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| CDS GCA 72 bp | AGCAACCCTGGCCTTATATCTGCAGTGCAAGTGGTCTaGAACCCTGGACTGGCCCAGCGCGCCATGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SNPGLISAVQVV*NPGLAQRAMAA Trigger: GGCAGCCATGGCGCGCTGGGCCAGTCCAGGGTTGCAGACCACTTGCACTGCAGATATAAGGCCAGGGTTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000589071.4 ENST00000654054.1 ENST00000654066.1 ENST00000654675.1 ENST00000655400.1 ENST00000657571.1 ENST00000659441.1 ENST00000661797.1 ENST00000662714.1 ENST00000662860.1 ENST00000664254.1 ENST00000666507.1 ENST00000667744.1 ENST00000668027.1 ENST00000669042.1 ENST00000669964.1 |
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| CDS CCA 72 bp | GCCTCAGCAACCCTGGCCTTATATCTGCAGTGCAAGTaGTCTGCAACCCTGGACTGGCCCAGCGCGCCATGG | + |
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Preference number: 6 (lower is better) Translates to: ASATLALYLQCK*SATLDWPSAPW Trigger: CCATGGCGCGCTGGGCCAGTCCAGGGTTGCAGACCACTTGCACTGCAGATATAAGGCCAGGGTTGCTGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000589071.4 ENST00000654054.1 ENST00000654066.1 ENST00000654675.1 ENST00000655400.1 ENST00000657571.1 ENST00000659441.1 ENST00000661797.1 ENST00000662714.1 ENST00000662860.1 ENST00000664254.1 ENST00000666507.1 ENST00000667744.1 ENST00000668027.1 ENST00000669042.1 ENST00000669964.1 |
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| CDS CCA 72 bp | GCGTTCGCGGGTTGCCAGCTTCTTCAGGTCCAAGCCTaGGCCAGGACCCCAATGACCAGGCCTCACTATCCA | + |
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Preference number: 6 (lower is better) Translates to: AFAGCQLLQVQA*ARTPMTRPHYP Trigger: TGGATAGTGAGGCCTGGTCATTGGGGTCCTGGCCCAGGCTTGGACCTGAAGAAGCTGGCAACCCGCGAACGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654208.1 |
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| CDS TCA 72 bp | AGCTTCTTCAGGTCCAAGCCTGGGCCAGGACCCCAATaGCCAGGCCTCACTATCCAGGACCCACTGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: SFFRSKPGPGPQ*PGLTIQDPLMA Trigger: GGCCATCAGTGGGTCCTGGATAGTGAGGCCTGGTCATTGGGGTCCTGGCCCAGGCTTGGACCTGAAGAAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654208.1 |
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| CDS TCA 72 bp | ACACGAGTTCTTTGGGCGCTCTGGCCAGGACCCCAATaGCCAGGCCTCACTATCCAGGACCCACTGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: TRVLWALWPGPQ*PGLTIQDPLMA Trigger: GGCCATCAGTGGGTCCTGGATAGTGAGGCCTGGTCATTGGGGTCCTGGCCAGAGCGCCCAAAGAACTCGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654929.1 |
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| CDS GCA 72 bp | AGGGACTCCATCTCCATGCACAGGAAGAGCCTGATTTaGGGGATGAGCCACACGGCTGGCCGCCTGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: RDSISMHRKSLI*GMSHTAGRLVL Trigger: CAACACCAGGCGGCCAGCCGTGTGGCTCATCCCGCAAATCAGGCTCTTCCTGTGCATGGAGATGGAGTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 35 transcripts: ENST00000397365.7 ENST00000588117.7 ENST00000588838.6 ENST00000589071.4 ENST00000602814.1 ENST00000654054.1 ENST00000654066.1 ENST00000654675.1 ENST00000654929.1 ENST00000655400.1 ENST00000656142.1 ENST00000657571.1 ENST00000658008.1 ENST00000658373.1 ENST00000658675.1 ENST00000659441.1 ENST00000659686.1 ENST00000661797.1 ENST00000662032.1 ENST00000662052.1 ENST00000662221.1 ENST00000662251.1 ENST00000662482.1 ENST00000662714.1 ENST00000662860.1 ENST00000664035.1 ENST00000664254.1 ENST00000665134.1 ENST00000666507.1 ENST00000667744.1 ENST00000668027.1 ENST00000669042.1 ENST00000669672.1 ENST00000669964.1 ENST00000671363.1 |
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| CDS GCA 72 bp | CTCATGGCCTCAGCAACCCTGGCCTTATATCTGCAGTaGAAGTGGTCTGCAACCCTGGACTGGCCCAGCGCG | + |
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Preference number: 6 (lower is better) Translates to: LMASATLALYLQ*KWSATLDWPSA Trigger: CGCGCTGGGCCAGTCCAGGGTTGCAGACCACTTGCACTGCAGATATAAGGCCAGGGTTGCTGAGGCCATGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000589071.4 ENST00000654054.1 ENST00000654066.1 ENST00000654675.1 ENST00000655400.1 ENST00000657571.1 ENST00000659441.1 ENST00000661797.1 ENST00000662714.1 ENST00000662860.1 ENST00000664254.1 ENST00000666507.1 ENST00000667744.1 ENST00000668027.1 ENST00000669042.1 ENST00000669964.1 |
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| CDS CCA 72 bp | TTATATCTGCAGTGCAAGTGGTCTGCAACCCTGGACTaGCCCAGCGCGCCATGGCTGCCCCTGTGCCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: LYLQCKWSATLD*PSAPWLPLCLD Trigger: GTCAAGGCACAGGGGCAGCCATGGCGCGCTGGGCCAGTCCAGGGTTGCAGACCACTTGCACTGCAGATATAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000589071.4 ENST00000654054.1 ENST00000654066.1 ENST00000654675.1 ENST00000655400.1 ENST00000657571.1 ENST00000659441.1 ENST00000661797.1 ENST00000662714.1 ENST00000662860.1 ENST00000664254.1 ENST00000666507.1 ENST00000667744.1 ENST00000668027.1 ENST00000669042.1 ENST00000669964.1 |
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| CDS CCA 72 bp | GGGCTGACTCGCAGGGGCTCATGGCCTCAGCAACCCTaGCCTTATATCTGCAGTGCAAGTGGTCTGCAACCC | + |
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Preference number: 6 (lower is better) Translates to: GLTRRGSWPQQP*PYICSASGLQP Trigger: GGGTTGCAGACCACTTGCACTGCAGATATAAGGCCAGGGTTGCTGAGGCCATGAGCCCCTGCGAGTCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000589071.4 ENST00000654054.1 ENST00000654066.1 ENST00000654675.1 ENST00000655400.1 ENST00000657571.1 ENST00000659441.1 ENST00000661797.1 ENST00000662714.1 ENST00000662860.1 ENST00000664254.1 ENST00000666507.1 ENST00000667744.1 ENST00000668027.1 ENST00000669042.1 ENST00000669964.1 |
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| CDS CCA 72 bp | ACTAGCCAGGCCCCACTGATGAGACTCCCACTGACTTaGGCCCAACTGACAAGACCCCCTCAGACCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: TSQAPLMRLPLT*AQLTRPPQTRS Trigger: GGACCTGGTCTGAGGGGGTCTTGTCAGTTGGGCCCAAGTCAGTGGGAGTCTCATCAGTGGGGCCTGGCTAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000658675.1 ENST00000659441.1 ENST00000665134.1 |
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| CDS GCA 72 bp | AGGGGCTCATGGCCTCAGCAACCCTGGCCTTATATCTaGAGTGCAAGTGGTCTGCAACCCTGGACTGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: RGSWPQQPWPYI*SASGLQPWTGP Trigger: TGGGCCAGTCCAGGGTTGCAGACCACTTGCACTGCAGATATAAGGCCAGGGTTGCTGAGGCCATGAGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000589071.4 ENST00000654054.1 ENST00000654066.1 ENST00000654675.1 ENST00000655400.1 ENST00000657571.1 ENST00000659441.1 ENST00000661797.1 ENST00000662714.1 ENST00000662860.1 ENST00000664254.1 ENST00000666507.1 ENST00000667744.1 ENST00000668027.1 ENST00000669042.1 ENST00000669964.1 |
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