Pregenerated sensors for LINC00904 (Homo sapiens)
Ensembl gene IDs: ENSG00000271171Ensembl transcript IDs: ENST00000603717.2, ENST00000604453.2, ENST00000605047.2, ENST00000651304.1, ENST00000653476.1, ENST00000657508.1, ENST00000657878.1, ENST00000658624.1, ENST00000659576.1, ENST00000662155.1, ENST00000665539.1, ENST00000667778.1, ENST00000667951.1, ENST00000668349.1
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCTGCCTGTGCTGGTGTCTTCTCCCCACCTTAGCCCAGGCCGGCTaGAGCGGCGGGGCTGCCTGGGCGGAGTCAGGAGACAGCACCGCC | + |
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Preference number: 5 (lower is better) Translates to: PCLCWCLLPTLAQAG*SGGAAWAESGDSTA Trigger: GGCGGTGCTGTCTCCTGACTCCGCCCAGGCAGCCCCGCCGCTGCAGCCGGCCTGGGCTAAGGTGGGGAGAAGACACCAGCACAGGCAGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665539.1 |
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| CDS GCA 90 bp | CCAGAGTCCCCAGCTGCAAGGGCCGGCGCACCCACGCGCACTGGTTaGCAAATCTCCCGCTTTCAGGCCAGGTGCGGAGCGCGCCTCGAC | + |
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Preference number: 5 (lower is better) Translates to: PESPAARAGAPTRTG*QISRFQARCGARLD Trigger: GTCGAGGCGCGCTCCGCACCTGGCCTGAAAGCGGGAGATTTGGCAACCAGTGCGCGTGGGTGCGCCGGCCCTTGCAGCTGGGGACTCTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000604453.2 ENST00000605047.2 ENST00000653476.1 ENST00000658624.1 ENST00000662155.1 ENST00000667778.1 |
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| CDS CCA 90 bp | GCCTCCAGAGTCCCCAGCTGCAAGGGCCGGCGCACCCACGCGCACTaGTTGCCAAATCTCCCGCTTTCAGGCCAGGTGCGGAGCGCGCCT | + |
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Preference number: 5 (lower is better) Translates to: ASRVPSCKGRRTHAH*LPNLPLSGQVRSAP Trigger: AGGCGCGCTCCGCACCTGGCCTGAAAGCGGGAGATTTGGCAACCAGTGCGCGTGGGTGCGCCGGCCCTTGCAGCTGGGGACTCTGGAGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000604453.2 ENST00000605047.2 ENST00000653476.1 ENST00000658624.1 ENST00000662155.1 ENST00000667778.1 |
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| CDS GCA 90 bp | CTGGGAGGATCTGGGGAGTTCCTGCCTCTGGCTTTGGGCAAGGTCTaGCTCCAGAGTCCCCAGCTGCAAGGGCCGGCGCACCCACGCGCA | + |
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Preference number: 5 (lower is better) Translates to: LGGSGEFLPLALGKV*LQSPQLQGPAHPRA Trigger: TGCGCGTGGGTGCGCCGGCCCTTGCAGCTGGGGACTCTGGAGGCAGACCTTGCCCAAAGCCAGAGGCAGGAACTCCCCAGATCCTCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000603717.2 ENST00000604453.2 ENST00000605047.2 ENST00000653476.1 ENST00000658624.1 ENST00000659576.1 ENST00000662155.1 ENST00000667778.1 ENST00000668349.1 |
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| CDS CCA 90 bp | CCCATGCTACCCTGGGAGGATCTGGGGAGTTCCTGCCTCTGGCTTTaGGCAAGGTCTGCCTCCAGAGTCCCCAGCTGCAAGGGCCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: PMLPWEDLGSSCLWL*ARSASRVPSCKGRR Trigger: GCGCCGGCCCTTGCAGCTGGGGACTCTGGAGGCAGACCTTGCCCAAAGCCAGAGGCAGGAACTCCCCAGATCCTCCCAGGGTAGCATGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000603717.2 ENST00000604453.2 ENST00000605047.2 ENST00000653476.1 ENST00000658624.1 ENST00000659576.1 ENST00000667778.1 ENST00000668349.1 |
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| CDS CCA 90 bp | AGCTCCCTACCCTGGGAGGATCTGGGGAGTTCCTGCCTCTGGCTTTaGGCAAGGTCTGCCTCCAGAGTCCCCAGCTGCAAGGGCCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: SSLPWEDLGSSCLWL*ARSASRVPSCKGRR Trigger: GCGCCGGCCCTTGCAGCTGGGGACTCTGGAGGCAGACCTTGCCCAAAGCCAGAGGCAGGAACTCCCCAGATCCTCCCAGGGTAGGGAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665539.1 |
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| CDS GCA 90 bp | AGGCGGCATCCTCCCATGCTACCCTGGGAGGATCTGGGGAGTTCCTaGCTCTGGCTTTGGGCAAGGTCTGCCTCCAGAGTCCCCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: RRHPPMLPWEDLGSS*LWLWARSASRVPSC Trigger: GCAGCTGGGGACTCTGGAGGCAGACCTTGCCCAAAGCCAGAGGCAGGAACTCCCCAGATCCTCCCAGGGTAGCATGGGAGGATGCCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000603717.2 ENST00000604453.2 ENST00000605047.2 ENST00000653476.1 ENST00000657508.1 ENST00000658624.1 ENST00000659576.1 ENST00000667778.1 ENST00000668349.1 |
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| CDS CCA 90 bp | TTGTTGGTCTCCTGGGAGGATCTGGGGAGTTCCTGCCTCTGGCTTTaGGCAAGGTCTGCCTCCAGAGTCCCCAGCTGCAAGGGCCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: LLVSWEDLGSSCLWL*ARSASRVPSCKGRR Trigger: GCGCCGGCCCTTGCAGCTGGGGACTCTGGAGGCAGACCTTGCCCAAAGCCAGAGGCAGGAACTCCCCAGATCCTCCCAGGAGACCAACAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662155.1 |
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| CDS GCA 90 bp | GCACCCACGCGCACTGGTTGCCAAATCTCCCGCTTTCAGGCCAGGTaGGGAGCGCGCCTCGACAGTCCTGAACATTCTCCACTTAACGGC | + |
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Preference number: 5 (lower is better) Translates to: APTRTGCQISRFQAR*GARLDSPEHSPLNG Trigger: GCCGTTAAGTGGAGAATGTTCAGGACTGTCGAGGCGCGCTCCGCACCTGGCCTGAAAGCGGGAGATTTGGCAACCAGTGCGCGTGGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658624.1 ENST00000662155.1 ENST00000667778.1 |
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| CDS GCA 90 bp | TTGAAGAGAAAGGCCCTGTGGGATATGCTAACAAGTGGAACTCCCTaGCCTACATCGTCTGAGGAAACTGGAACCCAGCCAAAGAAGACC | + |
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Preference number: 5 (lower is better) Translates to: LKRKALWDMLTSGTP*PTSSEETGTQPKKT Trigger: GGTCTTCTTTGGCTGGGTTCCAGTTTCCTCAGACGATGTAGGGCAGGGAGTTCCACTTGTTAGCATATCCCACAGGGCCTTTCTCTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000603717.2 ENST00000605047.2 ENST00000651304.1 ENST00000653476.1 ENST00000657878.1 ENST00000658624.1 ENST00000659576.1 ENST00000667951.1 ENST00000668349.1 |
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| CDS TCA 90 bp | TTCAGCACTTTTGCTCCATCTTTCAGGGCAAATGTACCTCCAGCATaGGCATGGAAGCAGCAGTCTCGCTTAGGACACATTTGTCACCTG | + |
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Preference number: 5 (lower is better) Translates to: FSTFAPSFRANVPPA*AWKQQSRLGHICHL Trigger: CAGGTGACAAATGTGTCCTAAGCGAGACTGCTGCTTCCATGCTCATGCTGGAGGTACATTTGCCCTGAAAGATGGAGCAAAAGTGCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653476.1 ENST00000657508.1 ENST00000658624.1 ENST00000668349.1 |
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| CDS TCA 90 bp | CACTCACTCACAATACCTGGGCTCTATCTAGACAAAGTAGCCCTCTaGCTTGGTGTAGTGAACACCATTGAGAAAATACCTGGCTATGGG | + |
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Preference number: 5 (lower is better) Translates to: HSLTIPGLYLDKVAL*LGVVNTIEKIPGYG Trigger: CCCATAGCCAGGTATTTTCTCAATGGTGTTCACTACACCAAGTCAGAGGGCTACTTTGTCTAGATAGAGCCCAGGTATTGTGAGTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653476.1 |
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| CDS CCA 90 bp | AGTAATGCACGATGCACACATGATAAGGAGGCATCACAGTACAGGTaGTTAAATTCAGGAACTCTGGAATCCGAGAGCCTGGGTCAAATC | + |
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Preference number: 5 (lower is better) Translates to: SNARCTHDKEASQYR*LNSGTLESESLGQI Trigger: GATTTGACCCAGGCTCTCGGATTCCAGAGTTCCTGAATTTAACCACCTGTACTGTGATGCCTCCTTATCATGTGTGCATCGTGCATTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000603717.2 ENST00000605047.2 ENST00000651304.1 ENST00000653476.1 ENST00000657878.1 ENST00000658624.1 ENST00000659576.1 ENST00000667951.1 ENST00000668349.1 |
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| CDS TCA 90 bp | ATTGTCTCCACTTGTATTAAACATTTTACTGGAGATCACAGTAACTaGTGTCATCTCATGTCCTTGCACCCAGGAGGAGATGCCACACAC | + |
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Preference number: 5 (lower is better) Translates to: IVSTCIKHFTGDHSN*CHLMSLHPGGDATH Trigger: GTGTGTGGCATCTCCTCCTGGGTGCAAGGACATGAGATGACATCAGTTACTGTGATCTCCAGTAAAATGTTTAATACAAGTGGAGACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000603717.2 |
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| CDS TCA 90 bp | CTATCTAGACAAAGTAGCCCTCTGACTTGGTGTAGTGAACACCATTaGGAAAATACCTGGCTATGGGCCAGTTTTCCATTAGTCTTAGAC | + |
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Preference number: 5 (lower is better) Translates to: LSRQSSPLTWCSEHH*ENTWLWASFPLVLD Trigger: GTCTAAGACTAATGGAAAACTGGCCCATAGCCAGGTATTTTCTCAATGGTGTTCACTACACCAAGTCAGAGGGCTACTTTGTCTAGATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653476.1 |
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| CDS GCA 72 bp | CCCCACCTTAGCCCAGGCCGGCTGCAGCGGCGGGGCTaGCTGGGCGGAGTCAGGAGACAGCACCGCCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: PHLSPGRLQRRG*LGGVRRQHRPA Trigger: GGCCGGGCGGTGCTGTCTCCTGACTCCGCCCAGGCAGCCCCGCCGCTGCAGCCGGCCTGGGCTAAGGTGGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665539.1 |
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| CDS CAA 90 bp | TCCAGAGTCCCCAGCTGCAAGGGCCGGCGCACCCACGCGCACTGGTaGCCAAATCTCCCGCTTTCAGGCCAGGTGCGGAGCGCGCCTCGA | + |
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Preference number: 6 (lower is better) Translates to: SRVPSCKGRRTHAHW*PNLPLSGQVRSAPR Trigger: TCGAGGCGCGCTCCGCACCTGGCCTGAAAGCGGGAGATTTGGCAACCAGTGCGCGTGGGTGCGCCGGCCCTTGCAGCTGGGGACTCTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000604453.2 ENST00000605047.2 ENST00000653476.1 ENST00000658624.1 ENST00000662155.1 ENST00000667778.1 |
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| CDS GCA 72 bp | CCAGCTGCAAGGGCCGGCGCACCCACGCGCACTGGTTaGCAAATCTCCCGCTTTCAGGCCAGGTGCGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: PAARAGAPTRTG*QISRFQARCGA Trigger: CGCTCCGCACCTGGCCTGAAAGCGGGAGATTTGGCAACCAGTGCGCGTGGGTGCGCCGGCCCTTGCAGCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000603717.2 ENST00000604453.2 ENST00000605047.2 ENST00000653476.1 ENST00000658624.1 ENST00000662155.1 ENST00000667778.1 |
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| CDS CCA 72 bp | GTCCCCAGCTGCAAGGGCCGGCGCACCCACGCGCACTaGTTGCCAAATCTCCCGCTTTCAGGCCAGGTGCGG | + |
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Preference number: 6 (lower is better) Translates to: VPSCKGRRTHAH*LPNLPLSGQVR Trigger: CCGCACCTGGCCTGAAAGCGGGAGATTTGGCAACCAGTGCGCGTGGGTGCGCCGGCCCTTGCAGCTGGGGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000603717.2 ENST00000604453.2 ENST00000605047.2 ENST00000653476.1 ENST00000658624.1 ENST00000662155.1 ENST00000667778.1 |
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| CDS CAA 72 bp | CCCAGCTGCAAGGGCCGGCGCACCCACGCGCACTGGTaGCCAAATCTCCCGCTTTCAGGCCAGGTGCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: PSCKGRRTHAHW*PNLPLSGQVRS Trigger: GCTCCGCACCTGGCCTGAAAGCGGGAGATTTGGCAACCAGTGCGCGTGGGTGCGCCGGCCCTTGCAGCTGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000603717.2 ENST00000604453.2 ENST00000605047.2 ENST00000653476.1 ENST00000658624.1 ENST00000662155.1 ENST00000667778.1 |
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| CDS GCA 72 bp | TCTGGGGAGTTCCTGCCTCTGGCTTTGGGCAAGGTCTaGCTCCAGAGTCCCCAGCTGCAAGGGCCGGCGCAC | + |
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Preference number: 6 (lower is better) Translates to: SGEFLPLALGKV*LQSPQLQGPAH Trigger: GTGCGCCGGCCCTTGCAGCTGGGGACTCTGGAGGCAGACCTTGCCCAAAGCCAGAGGCAGGAACTCCCCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000603717.2 ENST00000604453.2 ENST00000605047.2 ENST00000653476.1 ENST00000658624.1 ENST00000659576.1 ENST00000662155.1 ENST00000665539.1 ENST00000667778.1 ENST00000668349.1 |
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| CDS GCA 72 bp | AGGCGGCATCCTCCCATGCTACCCACGCGCACTGGTTaGCAAATCTCCCGCTTTCAGGCCAGGTGCGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: RRHPPMLPTRTG*QISRFQARCGA Trigger: CGCTCCGCACCTGGCCTGAAAGCGGGAGATTTGGCAACCAGTGCGCGTGGGTAGCATGGGAGGATGCCGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651304.1 |
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| CDS CAA 72 bp | GAGGCGGCATCCTCCCATGCTACCCACGCGCACTGGTaGCCAAATCTCCCGCTTTCAGGCCAGGTGCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: EAASSHATHAHW*PNLPLSGQVRS Trigger: GCTCCGCACCTGGCCTGAAAGCGGGAGATTTGGCAACCAGTGCGCGTGGGTAGCATGGGAGGATGCCGCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651304.1 |
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| CDS GCA 72 bp | CGCACTGGTTGCCAAATCTCCCGCTTTCAGGCCAGGTaGGGAGCGCGCCTCGACAGTCCTGAACATTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RTGCQISRFQAR*GARLDSPEHSP Trigger: TGGAGAATGTTCAGGACTGTCGAGGCGCGCTCCGCACCTGGCCTGAAAGCGGGAGATTTGGCAACCAGTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658624.1 ENST00000662155.1 ENST00000667778.1 |
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| CDS TCA 72 bp | CAGGAACTCTGGAATCCGAGAGCCTGGGTCAAATCCTaGCAGGGCCACTACCACCTGTGTGAGCCAAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: QELWNPRAWVKS*QGHYHLCEPRK Trigger: CTTCCTTGGCTCACACAGGTGGTAGTGGCCCTGTCAGGATTTGACCCAGGCTCTCGGATTCCAGAGTTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000603717.2 ENST00000605047.2 ENST00000651304.1 ENST00000653476.1 ENST00000657878.1 ENST00000658624.1 ENST00000659576.1 ENST00000667951.1 ENST00000668349.1 |
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| CDS CAA 72 bp | GACAATTGTTGGTCTCTGATGTGCCATCTCCTACGCTaGCTGAGGCAGCTGTGTGGTTGGCTGCTGGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: DNCWSLMCHLLR*LRQLCGWLLGS Trigger: GGACCCCAGCAGCCAACCACACAGCTGCCTCAGCAAGCGTAGGAGATGGCACATCAGAGACCAACAATTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000603717.2 ENST00000605047.2 ENST00000651304.1 ENST00000653476.1 ENST00000657878.1 ENST00000658624.1 ENST00000659576.1 ENST00000667951.1 ENST00000668349.1 |
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| CDS GCA 72 bp | AAGGCCCTGTGGGATATGCTAACAAGTGGAACTCCCTaGCCTACATCGTCTGAGGAAACTGGAACCCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: KALWDMLTSGTP*PTSSEETGTQP Trigger: TGGCTGGGTTCCAGTTTCCTCAGACGATGTAGGGCAGGGAGTTCCACTTGTTAGCATATCCCACAGGGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000603717.2 ENST00000605047.2 ENST00000651304.1 ENST00000653476.1 ENST00000657878.1 ENST00000658624.1 ENST00000659576.1 ENST00000667951.1 ENST00000668349.1 |
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| CDS TCA 72 bp | TTTGCTCCATCTTTCAGGGCAAATGTACCTCCAGCATaGGCATGGAAGCAGCAGTCTCGCTTAGGACACATT | + |
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Preference number: 6 (lower is better) Translates to: FAPSFRANVPPA*AWKQQSRLGHI Trigger: AATGTGTCCTAAGCGAGACTGCTGCTTCCATGCTCATGCTGGAGGTACATTTGCCCTGAAAGATGGAGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000653476.1 ENST00000657508.1 ENST00000658624.1 ENST00000668349.1 |
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| CDS CCA 72 bp | CGATGCACACATGATAAGGAGGCATCACAGTACAGGTaGTTAAATTCAGGAACTCTGGAATCCGAGAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: RCTHDKEASQYR*LNSGTLESESL Trigger: CAGGCTCTCGGATTCCAGAGTTCCTGAATTTAACCACCTGTACTGTGATGCCTCCTTATCATGTGTGCATCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000603717.2 ENST00000605047.2 ENST00000651304.1 ENST00000653476.1 ENST00000657878.1 ENST00000658624.1 ENST00000659576.1 ENST00000667951.1 ENST00000668349.1 |
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| CDS CCA 72 bp | AAAAGAAATGCCCAGTTTTGCTGTGCTGACAATTGTTaGTCTCTGATGTGCCATCTCCTACGCTTGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: KRNAQFCCADNC*SLMCHLLRLLR Trigger: CCTCAGCAAGCGTAGGAGATGGCACATCAGAGACCAACAATTGTCAGCACAGCAAAACTGGGCATTTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000603717.2 ENST00000605047.2 ENST00000651304.1 ENST00000653476.1 ENST00000657878.1 ENST00000658624.1 ENST00000659576.1 ENST00000667951.1 ENST00000668349.1 |
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| CDS CCA 72 bp | GAAGACACTTCTATTCCTGCACTCACTCACAATACCTaGGCTCTATCTAGACAAAGTAGCCCTCTGACTTGG | + |
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Preference number: 6 (lower is better) Translates to: EDTSIPALTHNT*ALSRQSSPLTW Trigger: CCAAGTCAGAGGGCTACTTTGTCTAGATAGAGCCCAGGTATTGTGAGTGAGTGCAGGAATAGAAGTGTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653476.1 |
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| CDS TCA 72 bp | CAAAGTAGCCCTCTGACTTGGTGTAGTGAACACCATTaGGAAAATACCTGGCTATGGGCCAGTTTTCCATTA | + |
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Preference number: 6 (lower is better) Translates to: QSSPLTWCSEHH*ENTWLWASFPL Trigger: TAATGGAAAACTGGCCCATAGCCAGGTATTTTCTCAATGGTGTTCACTACACCAAGTCAGAGGGCTACTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653476.1 |
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| CDS TCA 72 bp | ACAATACCTGGGCTCTATCTAGACAAAGTAGCCCTCTaGCTTGGTGTAGTGAACACCATTGAGAAAATACCT | + |
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Preference number: 6 (lower is better) Translates to: TIPGLYLDKVAL*LGVVNTIEKIP Trigger: AGGTATTTTCTCAATGGTGTTCACTACACCAAGTCAGAGGGCTACTTTGTCTAGATAGAGCCCAGGTATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653476.1 |
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| CDS TCA 72 bp | TTAAGAAAGGTAAGTCATCCATTTCAACCAGGACCCTaGAAGTTGTCCATGAAATTATTACCAGAGATATTG | + |
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Preference number: 6 (lower is better) Translates to: LRKVSHPFQPGP*KLSMKLLPEIL Trigger: CAATATCTCTGGTAATAATTTCATGGACAACTTTCAGGGTCCTGGTTGAAATGGATGACTTACCTTTCTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659576.1 ENST00000665539.1 |
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| CDS GCA 72 bp | AAACCCACGGCAAACATCATAATGATTAAATTTGGATaGTTTCCCTCTAAGTTTACAAACAAGATTATAGGC | + |
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Preference number: 6 (lower is better) Translates to: KPTANIIMIKFG*FPSKFTNKIIG Trigger: GCCTATAATCTTGTTTGTAAACTTAGAGGGAAAGCATCCAAATTTAATCATTATGATGTTTGCCGTGGGTTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667778.1 |
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