Pregenerated sensors for LINC00901 (Homo sapiens)

Ensembl gene IDs: ENSG00000242385

Ensembl transcript IDs: ENST00000487512.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TGTAAGAGGAGCATGCCATACTTAGAGGGTGATATATGTTATCAGTaGAATGCTGCCTTCTCAAATAAGGTAGCTGCAATGTCACTAAAT	+
Preference number: 5 (lower is better) Translates to: CKRSMPYLEGDICYQ*NAAFSNKVAAMSLN Trigger: ATTTAGTGACATTGCAGCTACCTTATTTGAGAAGGCAGCATTCCACTGATAACATATATCACCCTCTAAGTATGGCATGCTCCTCTTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487512.1
CDS CAA 72 bp	ATCCAGAGTGTGCTGAAAAGTTTTAGGCAGGGCTGGTaGGCAGGTGAATCTTGTTACCTCATTTCATCTCTC	+
Preference number: 6 (lower is better) Translates to: IQSVLKSFRQGW*AGESCYLISSL Trigger: GAGAGATGAAATGAGGTAACAAGATTCACCTGCCAACCAGCCCTGCCTAAAACTTTTCAGCACACTCTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487512.1
CDS TCA 72 bp	TCTAATAAAACTCTTAGGCGATGGAGATGCTGCTGGTaGGTAGACCAAATCTGGAGTAGGAAGGCTTTACAT	+
Preference number: 6 (lower is better) Translates to: SNKTLRRWRCCW*VDQIWSRKALH Trigger: ATGTAAAGCCTTCCTACTCCAGATTTGGTCTACTCACCAGCAGCATCTCCATCGCCTAAGAGTTTTATTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487512.1
CDS CCA 72 bp	AGCATGCCATACTTAGAGGGTGATATATGTTATCAGTaGAATGCTGCCTTCTCAAATAAGGTAGCTGCAATG	+
Preference number: 6 (lower is better) Translates to: SMPYLEGDICYQ*NAAFSNKVAAM Trigger: CATTGCAGCTACCTTATTTGAGAAGGCAGCATTCCACTGATAACATATATCACCCTCTAAGTATGGCATGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487512.1
CDS CCA 72 bp	AAAATTCAGGTTATCTTCCTGCCGCTTATGACATTTTaGGAACATCTCAGGCGGGATATAGAAACTAAATAT	+
Preference number: 6 (lower is better) Translates to: KIQVIFLPLMTF*EHLRRDIETKY Trigger: ATATTTAGTTTCTATATCCCGCCTGAGATGTTCCCAAAATGTCATAAGCGGCAGGAAGATAACCTGAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487512.1
CDS GCA 72 bp	GCTAATATTATTAGTGTTATGAGGGTATCTTTCTCATaGTGGGCTCTAATCGCCATTTTTATGAGTACTGTA	+
Preference number: 6 (lower is better) Translates to: ANIISVMRVSFS*WALIAIFMSTV Trigger: TACAGTACTCATAAAAATGGCGATTAGAGCCCAGCATGAGAAAGATACCCTCATAACACTAATAATATTAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000487512.1

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