Pregenerated sensors for LINC00900 (Homo sapiens)
Ensembl gene IDs: ENSG00000246100Ensembl transcript IDs: ENST00000499809.1, ENST00000501294.1, ENST00000514294.2, ENST00000535683.1, ENST00000537070.1, ENST00000602803.1, ENST00000653265.1, ENST00000654271.1, ENST00000657395.1, ENST00000666130.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGGCGGCGGCGGCCGGGTCATCAGAAGCACAGTGGAGCCGCCCCCTaGTTTGGGAGGAGCAAAAGAGCCTCTCGCTTGCCTCCCGCTCGA | + |
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Preference number: 5 (lower is better) Translates to: RRRRPGHQKHSGAAP*FGRSKRASRLPPAR Trigger: TCGAGCGGGAGGCAAGCGAGAGGCTCTTTTGCTCCTCCCAAAGCAGGGGGCGGCTCCACTGTGCTTCTGATGACCCGGCCGCCGCCGCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000653265.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS CCA 90 bp | GCGGCGGCCGGGTCATCAGAAGCACAGTGGAGCCGCCCCCTGCTTTaGGAGGAGCAAAAGAGCCTCTCGCTTGCCTCCCGCTCGAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: AAAGSSEAQWSRPLL*EEQKSLSLASRSSS Trigger: GGAGCTCGAGCGGGAGGCAAGCGAGAGGCTCTTTTGCTCCTCCCAAAGCAGGGGGCGGCTCCACTGTGCTTCTGATGACCCGGCCGCCGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000653265.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS CCA 90 bp | AGCCTTGGAGGGGCTGAGGGACTCGCCATGCAGGAAGAGGGTGTCTaGGTAGTGAGTGAGCCTGGCCAGGCAATCTCAGGGCTCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SLGGAEGLAMQEEGV*VVSEPGQAISGLPR Trigger: CCTGGGGAGCCCTGAGATTGCCTGGCCAGGCTCACTCACTACCCAGACACCCTCTTCCTGCATGGCGAGTCCCTCAGCCCCTCCAAGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS GCA 90 bp | CGGGGAGGTTTACTCCCTGAGCCAGCCCACTGGCAGAAGGGATCCTaGCATTGTTCAGCTGATACCCCATCCTGGCACTTCCCGAATGCT | + |
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Preference number: 5 (lower is better) Translates to: RGGLLPEPAHWQKGS*HCSADTPSWHFPNA Trigger: AGCATTCGGGAAGTGCCAGGATGGGGTATCAGCTGAACAATGGCAGGATCCCTTCTGCCAGTGGGCTGGCTCAGGGAGTAAACCTCCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS CCA 90 bp | CCAGGCAATCTCAGGGCTCCCCAGGCCACATCTCACAATAGGTATTaGGTACACACTACTTCCACCCTGAATCCTCACTGGCAGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: PGNLRAPQATSHNRY*VHTTSTLNPHWQPP Trigger: GGGAGGCTGCCAGTGAGGATTCAGGGTGGAAGTAGTGTGTACCCAATACCTATTGTGAGATGTGGCCTGGGGAGCCCTGAGATTGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS CCA 90 bp | AACTTCTGGGCTCAAGCAATCCTTCCGCCTCAACTCCTGAGTAGCTaGGACTGCAGGAGCTGTAGTCCCATGGTGGCAGGGACTATAGCA | + |
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Preference number: 5 (lower is better) Translates to: NFWAQAILPPQLLSS*DCRSCSPMVAGTIA Trigger: TGCTATAGTCCCTGCCACCATGGGACTACAGCTCCTGCAGTCCCAGCTACTCAGGAGTTGAGGCGGAAGGATTGCTTGAGCCCAGAAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS TCA 90 bp | AGTAACTCAAGATGGAGGATGTGGATTACTCCGATGTCTGAGAATTaGGCCTTGGAGGGGCTGAGGGACTCGCCATGCAGGAAGAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: SNSRWRMWITPMSEN*ALEGLRDSPCRKRV Trigger: CACCCTCTTCCTGCATGGCGAGTCCCTCAGCCCCTCCAAGGCTCAATTCTCAGACATCGGAGTAATCCACATCCTCCATCTTGAGTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS TCA 90 bp | CGGGTACTGGTGGTGTTCACCCTGGTGCTAACGCTGTTTCTCAAGTaGTGGTGTCCGGTCCAAATCAGTGTCCCAGTGAACTCAGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: RVLVVFTLVLTLFLK*WCPVQISVPVNSGK Trigger: CTTTCCTGAGTTCACTGGGACACTGATTTGGACCGGACACCATCACTTGAGAAACAGCGTTAGCACCAGGGTGAACACCACCAGTACCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666130.1 |
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| CDS GCA 90 bp | CACCTTTCTAGAAATTCAGAACGCAGAGAAACCAGTGCCCAGCCCTaGTCTTCAGCAAACGGTGTATTTCAGCCCGAGTTTCCTTCCGGG | + |
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Preference number: 5 (lower is better) Translates to: HLSRNSERRETSAQP*SSANGVFQPEFPSG Trigger: CCCGGAAGGAAACTCGGGCTGAAATACACCGTTTGCTGAAGAGCAGGGCTGGGCACTGGTTTCTCTGCGTTCTGAATTTCTAGAAAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654271.1 |
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| CDS TCA 90 bp | GCACTGGTGAGAAAGGTTAATCTCAGTGGGCCTCTAAAAGCTTCATaGGGCTTAGTCCTGGGCCCACTGTGTACCCAGCTTAAGGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: ALVRKVNLSGPLKAS*GLVLGPLCTQLKEA Trigger: TGCTTCCTTAAGCTGGGTACACAGTGGGCCCAGGACTAAGCCTCATGAAGCTTTTAGAGGCCCACTGAGATTAACCTTTCTCACCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499809.1 ENST00000666130.1 |
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| CDS CCA 90 bp | CACTGGCAGAAGGGATCCTGCCATTGTTCAGCTGATACCCCATCCTaGCACTTCCCGAATGCTTATCCTTTCTCTGGCAAGTTAACTCTA | + |
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Preference number: 5 (lower is better) Translates to: HWQKGSCHCSADTPS*HFPNAYPFSGKLTL Trigger: TAGAGTTAACTTGCCAGAGAAAGGATAAGCATTCGGGAAGTGCCAGGATGGGGTATCAGCTGAACAATGGCAGGATCCCTTCTGCCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS TCA 90 bp | AGGGCAGCAGGTCCAAAGTGGGAAACTAGACCTAGGGCCATCTACTaGAAATCTCAATCAGGTAGGAAATCTCAGGCTGTGATGGGAATG | + |
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Preference number: 5 (lower is better) Translates to: RAAGPKWETRPRAIY*KSQSGRKSQAVMGM Trigger: CATTCCCATCACAGCCTGAGATTTCCTACCTGATTGAGATTTTCAGTAGATGGCCCTAGGTCTAGTTTCCCACTTTGGACCTGCTGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS TCA 90 bp | TGTCCCCTGCAAGTCCATCCATTAGCCAAGTCCATGGGCATTTATTaGGCACTTATGCCACATCAATCTATGCTCGGCTCCTTTCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: CPLQVHPLAKSMGIY*ALMPHQSMLGSFLE Trigger: TTCTAGAAAGGAGCCGAGCATAGATTGATGTGGCATAAGTGCTCAATAAATGCCCATGGACTTGGCTAATGGATGGACTTGCAGGGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000501294.1 |
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| CDS GCA 90 bp | GATAGATATGTAGATCAGGGCAACAGCGCTGGAAGAGAATTAGAGTaGAACTCTAGAACTAGACAGAAGGCAGCCATGGTCACTAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: DRYVDQGNSAGRELE*NSRTRQKAAMVTRK Trigger: CTTCCTAGTGACCATGGCTGCCTTCTGTCTAGTTCTAGAGTTGCACTCTAATTCTCTTCCAGCGCTGTTGCCCTGATCTACATATCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499809.1 ENST00000666130.1 |
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| CDS CCA 90 bp | GTTTCTCCCTTTATCCCTGTCATACCTGACACTCAATTGTCCCTTTaGGCTCAAGACAGAAACAAAGGAAATTCCGTCTCCCACTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: VSPFIPVIPDTQLSL*AQDRNKGNSVSHFL Trigger: GAGGAAGTGGGAGACGGAATTTCCTTTGTTTCTGTCTTGAGCCCAAAGGGACAATTGAGTGTCAGGTATGACAGGGATAAAGGGAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000501294.1 ENST00000514294.2 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS TCA 90 bp | AAGTTACTAGGATTGGTCAAGACAGGAACAGGAACTGGGCAAATCTaGATCTGTAATTTGGTCTGCAGTACCTATAGGTGGGCAGGACTA | + |
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Preference number: 5 (lower is better) Translates to: KLLGLVKTGTGTGQI*ICNLVCSTYRWAGL Trigger: TAGTCCTGCCCACCTATAGGTACTGCAGACCAAATTACAGATTCAGATTTGCCCAGTTCCTGTTCCTGTCTTGACCAATCCTAGTAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499809.1 ENST00000666130.1 |
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| CDS CCA 90 bp | TTGTCCATTATGTTTCAAAAGAGAGGTGAAATCTTCCTAGTTACTTaGAAGTCCTCTATTGGAGCCAAGGGCAGCAGGTCCAAAGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: LSIMFQKRGEIFLVT*KSSIGAKGSRSKVG Trigger: TCCCACTTTGGACCTGCTGCCCTTGGCTCCAATAGAGGACTTCCAAGTAACTAGGAAGATTTCACCTCTCTTTTGAAACATAATGGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS TCA 90 bp | CAAGTCCCACCTTCATCTGAAGAGATCAGATCACTTTTCTTCGATTaGAATAGGCATGCAATTCTGACAAACATAAGACTTGGGAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: QVPPSSEEIRSLFFD*NRHAILTNIRLGRG Trigger: CCCTCTCCCAAGTCTTATGTTTGTCAGAATTGCATGCCTATTTCAATCGAAGAAAAGTGATCTGATCTCTTCAGATGAAGGTGGGACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS CCA 90 bp | AGAAATGGTTTAGAAATCCTCCAAATTCTAGATTCTAGAATTGTGTaGGTTCAACCCTGTCTTCCCTTCCTCCTAGGAAAACTTGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: RNGLEILQILDSRIV*VQPCLPFLLGKLAG Trigger: GCCTGCAAGTTTTCCTAGGAGGAAGGGAAGACAGGGTTGAACCCACACAATTCTAGAATCTAGAATTTGGAGGATTTCTAAACCATTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS GCA 90 bp | TCAAGCTCATGCTGCCAGTTCAGTTTATTTCGGTTTCTCCTTTTCTaGAGGCATCAGGTACATTATAGACAGGAAAATTGCATTTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: SSSCCQFSLFRFLLF*RHQVHYRQENCISE Trigger: TTCTGAAATGCAATTTTCCTGTCTATAATGTACCTGATGCCTGCAGAAAAGGAGAAACCGAAATAAACTGAACTGGCAGCATGAGCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602803.1 |
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| CDS CCA 72 bp | AGGGCGGCGGCGGCGGCCGGGTCATCAGAAGCACAGTaGAGCCGCCCCCTGCTTTGGGAGGAGCAAAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: RAAAAAGSSEAQ*SRPLLWEEQKS Trigger: GCTCTTTTGCTCCTCCCAAAGCAGGGGGCGGCTCCACTGTGCTTCTGATGACCCGGCCGCCGCCGCCGCCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000653265.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS CAA 90 bp | GGCGGCGGCCGGGTCATCAGAAGCACAGTGGAGCCGCCCCCTGCTTaGGGAGGAGCAAAAGAGCCTCTCGCTTGCCTCCCGCTCGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: GGGRVIRSTVEPPPA*GGAKEPLACLPLEL Trigger: GAGCTCGAGCGGGAGGCAAGCGAGAGGCTCTTTTGCTCCTCCCAAAGCAGGGGGCGGCTCCACTGTGCTTCTGATGACCCGGCCGCCGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000653265.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS GCA 72 bp | CGGCCGGGTCATCAGAAGCACAGTGGAGCCGCCCCCTaGTTTGGGAGGAGCAAAAGAGCCTCTCGCTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: RPGHQKHSGAAP*FGRSKRASRLP Trigger: AGGCAAGCGAGAGGCTCTTTTGCTCCTCCCAAAGCAGGGGGCGGCTCCACTGTGCTTCTGATGACCCGGCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000653265.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS CAA 72 bp | CGGGTCATCAGAAGCACAGTGGAGCCGCCCCCTGCTTaGGGAGGAGCAAAAGAGCCTCTCGCTTGCCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: RVIRSTVEPPPA*GGAKEPLACLP Trigger: CGGGAGGCAAGCGAGAGGCTCTTTTGCTCCTCCCAAAGCAGGGGGCGGCTCCACTGTGCTTCTGATGACCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000653265.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS CCA 72 bp | GCTCAAGCAATCCTTCCGCCTCAACTCCTGAGTAGCTaGGACTGCAGGAGCTGTAGTCCCATGGTGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: AQAILPPQLLSS*DCRSCSPMVAG Trigger: CCCTGCCACCATGGGACTACAGCTCCTGCAGTCCCAGCTACTCAGGAGTTGAGGCGGAAGGATTGCTTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS CAA 72 bp | GCCCCCTGCTTTGGGAGGAGCAAAAGAGCCTCTCGCTaGCCTCCCGCTCGAGCTCCTTCTCCTCTTCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: APCFGRSKRASR*PPARAPSPLPF Trigger: AAAAGGAAGAGGAGAAGGAGCTCGAGCGGGAGGCAAGCGAGAGGCTCTTTTGCTCCTCCCAAAGCAGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666130.1 |
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| CDS TCA 72 bp | TTACTCCGATGTCTGAGAATTGAGCCTTGGAGGGGCTaGGGGACTCGCCATGCAGGAAGAGGGTGTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LLRCLRIEPWRG*GTRHAGRGCLG Trigger: ACCCAGACACCCTCTTCCTGCATGGCGAGTCCCTCAGCCCCTCCAAGGCTCAATTCTCAGACATCGGAGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS GCA 72 bp | GCAATCCTTCCGCCTCAACTCCTGAGTAGCTGGGACTaGAGGAGCTGTAGTCCCATGGTGGCAGGGACTATA | + |
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Preference number: 6 (lower is better) Translates to: AILPPQLLSSWD*RSCSPMVAGTI Trigger: TATAGTCCCTGCCACCATGGGACTACAGCTCCTGCAGTCCCAGCTACTCAGGAGTTGAGGCGGAAGGATTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS TCA 72 bp | AGCCCACTGGCAGAAGGGATCCTGCCATTGTTCAGCTaGTACCCCATCCTGGCACTTCCCGAATGCTTATCC | + |
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Preference number: 6 (lower is better) Translates to: SPLAEGILPLFS*YPILALPECLS Trigger: GGATAAGCATTCGGGAAGTGCCAGGATGGGGTATCAGCTGAACAATGGCAGGATCCCTTCTGCCAGTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS TCA 72 bp | AGATGGAGGATGTGGATTACTCCGATGTCTGAGAATTaGGCCTTGGAGGGGCTGAGGGACTCGCCATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RWRMWITPMSEN*ALEGLRDSPCR Trigger: CCTGCATGGCGAGTCCCTCAGCCCCTCCAAGGCTCAATTCTCAGACATCGGAGTAATCCACATCCTCCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS TCA 72 bp | AGAGAAACAAAATTCCTTCCGGGGAGGTTTACTCCCTaGGCCAGCCCACTGGCAGAAGGGATCCTGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: RETKFLPGRFTP*ASPLAEGILPL Trigger: CAATGGCAGGATCCCTTCTGCCAGTGGGCTGGCTCAGGGAGTAAACCTCCCCGGAAGGAATTTTGTTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS CAA 90 bp | ACGCAGCATAGGGTGAAGTTGCATCCTGGAGACTGCAAATTGATGTaGGTAAGAGCCACAAGCATCGGCCTCTCCAAACCCACGGGGATC | + |
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Preference number: 6 (lower is better) Translates to: TQHRVKLHPGDCKLM*VRATSIGLSKPTGI Trigger: GATCCCCGTGGGTTTGGAGAGGCCGATGCTTGTGGCTCTTACCAACATCAATTTGCAGTCTCCAGGATGCAACTTCACCCTATGCTGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602803.1 |
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| CDS TCA 72 bp | GTGGTGTTCACCCTGGTGCTAACGCTGTTTCTCAAGTaGTGGTGTCCGGTCCAAATCAGTGTCCCAGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: VVFTLVLTLFLK*WCPVQISVPVN Trigger: GTTCACTGGGACACTGATTTGGACCGGACACCATCACTTGAGAAACAGCGTTAGCACCAGGGTGAACACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666130.1 |
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| CDS GCA 72 bp | TTCAGTTGTCATACCCCCAGGTGTTGCCCCAGGGCATaGAGCAACTTAATCTGTGGGTCAATAGGGAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: FSCHTPRCCPRA*SNLICGSIGKE Trigger: CTCTTTCCCTATTGACCCACAGATTAAGTTGCTGCATGCCCTGGGGCAACACCTGGGGGTATGACAACTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666130.1 |
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| CDS CCA 72 bp | CCCATCCTGGCACTTCCCGAATGCTTATCCTTTCTCTaGCAAGTTAACTCTAGGCAGCAGCATCTCCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: PILALPECLSFL*QVNSRQQHLQV Trigger: GACTTGGAGATGCTGCTGCCTAGAGTTAACTTGCCAGAGAAAGGATAAGCATTCGGGAAGTGCCAGGATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS CCA 72 bp | AAGGGATCCTGCCATTGTTCAGCTGATACCCCATCCTaGCACTTCCCGAATGCTTATCCTTTCTCTGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: KGSCHCSADTPS*HFPNAYPFSGK Trigger: CTTGCCAGAGAAAGGATAAGCATTCGGGAAGTGCCAGGATGGGGTATCAGCTGAACAATGGCAGGATCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS CAA 72 bp | CAGCATAGGGTGAAGTTGCATCCTGGAGACTGCAAATaGATGTTGGTAAGAGCCACAAGCATCGGCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QHRVKLHPGDCK*MLVRATSIGLS Trigger: GGAGAGGCCGATGCTTGTGGCTCTTACCAACATCAATTTGCAGTCTCCAGGATGCAACTTCACCCTATGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602803.1 |
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| CDS TCA 72 bp | AGAAAGGTTAATCTCAGTGGGCCTCTAAAAGCTTCATaGGGCTTAGTCCTGGGCCCACTGTGTACCCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: RKVNLSGPLKAS*GLVLGPLCTQL Trigger: AAGCTGGGTACACAGTGGGCCCAGGACTAAGCCTCATGAAGCTTTTAGAGGCCCACTGAGATTAACCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000499809.1 ENST00000666130.1 |
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| CDS GCA 72 bp | TTAACTTCCTCCAGGATCCCACCTATGAGGAGCGAATaGGAACAGTCCAAACACGCCATCTGTTCATTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LTSSRIPPMRSE*EQSKHAICSLR Trigger: CCTCAATGAACAGATGGCGTGTTTGGACTGTTCGCATTCGCTCCTCATAGGTGGGATCCTGGAGGAAGTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000501294.1 ENST00000514294.2 ENST00000535683.1 ENST00000537070.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS GCA 72 bp | GTAGATCAGGGCAACAGCGCTGGAAGAGAATTAGAGTaGAACTCTAGAACTAGACAGAAGGCAGCCATGGTC | + |
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Preference number: 6 (lower is better) Translates to: VDQGNSAGRELE*NSRTRQKAAMV Trigger: GACCATGGCTGCCTTCTGTCTAGTTCTAGAGTTGCACTCTAATTCTCTTCCAGCGCTGTTGCCCTGATCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499809.1 ENST00000666130.1 |
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| CDS GCA 72 bp | GTGGGAAGAGATTCATTTGTCCCTATGAGGAGCGAATaGGAACAGTCCAAACACGCCATCTGTTCATTGAGG | + |
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Preference number: 6 (lower is better) Translates to: VGRDSFVPMRSE*EQSKHAICSLR Trigger: CCTCAATGAACAGATGGCGTGTTTGGACTGTTCGCATTCGCTCCTCATAGGGACAAATGAATCTCTTCCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499809.1 ENST00000653265.1 |
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| CDS CAA 90 bp | GTGTCCCCTGCAAGTCCATCCATTAGCCAAGTCCATGGGCATTTATaGAGCACTTATGCCACATCAATCTATGCTCGGCTCCTTTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: VSPASPSISQVHGHL*STYATSIYARLLSR Trigger: TCTAGAAAGGAGCCGAGCATAGATTGATGTGGCATAAGTGCTCAATAAATGCCCATGGACTTGGCTAATGGATGGACTTGCAGGGGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000501294.1 |
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| CDS TCA 72 bp | GGTCCAAAGTGGGAAACTAGACCTAGGGCCATCTACTaGAAATCTCAATCAGGTAGGAAATCTCAGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GPKWETRPRAIY*KSQSGRKSQAV Trigger: CACAGCCTGAGATTTCCTACCTGATTGAGATTTTCAGTAGATGGCCCTAGGTCTAGTTTCCCACTTTGGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS TCA 72 bp | GGATTGGTCAAGACAGGAACAGGAACTGGGCAAATCTaGATCTGTAATTTGGTCTGCAGTACCTATAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GLVKTGTGTGQI*ICNLVCSTYRW Trigger: CCACCTATAGGTACTGCAGACCAAATTACAGATTCAGATTTGCCCAGTTCCTGTTCCTGTCTTGACCAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000499809.1 ENST00000666130.1 |
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| CDS CCA 72 bp | AATACAGGTATTTGTGCAATAAATGATCCTAGTGATTaGGCAGGGAAGCCCAGCTTCACTCCACATGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: NTGICAINDPSD*AGKPSFTPHAV Trigger: GACAGCATGTGGAGTGAAGCTGGGCTTCCCTGCCCAATCACTAGGATCATTTATTGCACAAATACCTGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000501294.1 ENST00000514294.2 ENST00000537070.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS CCA 72 bp | ATGTTTCAAAAGAGAGGTGAAATCTTCCTAGTTACTTaGAAGTCCTCTATTGGAGCCAAGGGCAGCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: MFQKRGEIFLVT*KSSIGAKGSRS Trigger: GGACCTGCTGCCCTTGGCTCCAATAGAGGACTTCCAAGTAACTAGGAAGATTTCACCTCTCTTTTGAAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS CAA 90 bp | TCTCAGTTTCAACCTGGTTCACTCCAGGCGAATAAGGTGATCATTTaGCCCACTTTGATTCTAGAGAGAAACAAAATTCCTTCCGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SQFQPGSLQANKVII*PTLILERNKIPSGE Trigger: CTCCCCGGAAGGAATTTTGTTTCTCTCTAGAATCAAAGTGGGCAAAATGATCACCTTATTCGCCTGGAGTGAACCAGGTTGAAACTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS CCA 72 bp | TTTATCCCTGTCATACCTGACACTCAATTGTCCCTTTaGGCTCAAGACAGAAACAAAGGAAATTCCGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: FIPVIPDTQLSL*AQDRNKGNSVS Trigger: GGAGACGGAATTTCCTTTGTTTCTGTCTTGAGCCCAAAGGGACAATTGAGTGTCAGGTATGACAGGGATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000501294.1 ENST00000514294.2 ENST00000537070.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS CCA 72 bp | TATGTGCACACATGGGCTTTCTCTTCCTTAGCAGACTaGGATAAATTTTTCAGGAGTAAGGAGAAAGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: YVHTWAFSSLAD*DKFFRSKEKVG Trigger: CCCAACTTTCTCCTTACTCCTGAAAAATTTATCCCAGTCTGCTAAGGAAGAGAAAGCCCATGTGTGCACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000499809.1 ENST00000666130.1 |
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| CDS GCA 72 bp | TGCTGCCAGTTCAGTTTATTTCGGTTTCTCCTTTTCTaGAGGCATCAGGTACATTATAGACAGGAAAATTGC | + |
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Preference number: 6 (lower is better) Translates to: CCQFSLFRFLLF*RHQVHYRQENC Trigger: GCAATTTTCCTGTCTATAATGTACCTGATGCCTGCAGAAAAGGAGAAACCGAAATAAACTGAACTGGCAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602803.1 |
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| CDS CAA 72 bp | CTAGCCAGGTGCACCTCTCATCCTAAAGAAACACATTaGTCCATTATGTTTCAAAAGAGAGGTGAAATCTTC | + |
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Preference number: 6 (lower is better) Translates to: LARCTSHPKETH*SIMFQKRGEIF Trigger: GAAGATTTCACCTCTCTTTTGAAACATAATGGACAAATGTGTTTCTTTAGGATGAGAGGTGCACCTGGCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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| CDS TCA 72 bp | CCTTCATCTGAAGAGATCAGATCACTTTTCTTCGATTaGAATAGGCATGCAATTCTGACAAACATAAGACTT | + |
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Preference number: 6 (lower is better) Translates to: PSSEEIRSLFFD*NRHAILTNIRL Trigger: AAGTCTTATGTTTGTCAGAATTGCATGCCTATTTCAATCGAAGAAAAGTGATCTGATCTCTTCAGATGAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000499809.1 ENST00000654271.1 ENST00000657395.1 ENST00000666130.1 |
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