Pregenerated sensors for LINC00899 (Homo sapiens)
Ensembl gene IDs: ENSG00000231711Ensembl transcript IDs: ENST00000421538.1, ENST00000444890.1, ENST00000609737.1
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGGGCCGGGCCAGCAAATCATTCCGCAAGGTGGAGAACTGCAGGCTaGGGGCACCGTGGGCCTGGGCCCGGGACCCAGCATGGAACCCCT | + |
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Preference number: 5 (lower is better) Translates to: WAGPANHSARWRTAG*GHRGPGPGTQHGTP Trigger: AGGGGTTCCATGCTGGGTCCCGGGCCCAGGCCCACGGTGCCCTCAGCCTGCAGTTCTCCACCTTGCGGAATGATTTGCTGGCCCGGCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS CCA 90 bp | GCACCGTGGGCCTGGGCCCGGGACCCAGCATGGAACCCCTTCTCCTaGAGCACCAGGGGTCACAACAGTCCCTCCACTCCAGGGATCACG | + |
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Preference number: 5 (lower is better) Translates to: APWAWARDPAWNPFS*STRGHNSPSTPGIT Trigger: CGTGATCCCTGGAGTGGAGGGACTGTTGTGACCCCTGGTGCTCCAGGAGAAGGGGTTCCATGCTGGGTCCCGGGCCCAGGCCCACGGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS CCA 90 bp | TCATTCCGCAAGGTGGAGAACTGCAGGCTGAGGGCACCGTGGGCCTaGGCCCGGGACCCAGCATGGAACCCCTTCTCCTGGAGCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: SFRKVENCRLRAPWA*ARDPAWNPFSWSTR Trigger: CCTGGTGCTCCAGGAGAAGGGGTTCCATGCTGGGTCCCGGGCCCAGGCCCACGGTGCCCTCAGCCTGCAGTTCTCCACCTTGCGGAATGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS CCA 90 bp | GTCCCTCCACTCCAGGGATCACGGGTGACCCACGGCCGGGTGCTTTaGGGACGAGACAAAGACAGCGTGTTCCTCAAGCCCCTGCCTACC | + |
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Preference number: 5 (lower is better) Translates to: VPPLQGSRVTHGRVL*GRDKDSVFLKPLPT Trigger: GGTAGGCAGGGGCTTGAGGAACACGCTGTCTTTGTCTCGTCCCCAAAGCACCCGGCCGTGGGTCACCCGTGATCCCTGGAGTGGAGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS CCA 90 bp | AGCAAATCATTCCGCAAGGTGGAGAACTGCAGGCTGAGGGCACCGTaGGCCTGGGCCCGGGACCCAGCATGGAACCCCTTCTCCTGGAGC | + |
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Preference number: 5 (lower is better) Translates to: SKSFRKVENCRLRAP*AWARDPAWNPFSWS Trigger: GCTCCAGGAGAAGGGGTTCCATGCTGGGTCCCGGGCCCAGGCCCACGGTGCCCTCAGCCTGCAGTTCTCCACCTTGCGGAATGATTTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS TCA 90 bp | GAGCACCAGGGGTCACAACAGTCCCTCCACTCCAGGGATCACGGGTaGCCCACGGCCGGGTGCTTTGGGGACGAGACAAAGACAGCGTGT | + |
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Preference number: 5 (lower is better) Translates to: EHQGSQQSLHSRDHG*PTAGCFGDETKTAC Trigger: ACACGCTGTCTTTGTCTCGTCCCCAAAGCACCCGGCCGTGGGTCACCCGTGATCCCTGGAGTGGAGGGACTGTTGTGACCCCTGGTGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS CCA 90 bp | CCTCCCAGCGCCTCCAGGGCCCTTGCAGTCTCGAGAGATGTGGCTTaGCCACTTTTGCAGATTCCCAGGCCTGGGGCCACTCAGTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: PPSASRALAVSRDVA*PLLQIPRPGATQLP Trigger: AGGCAACTGAGTGGCCCCAGGCCTGGGAATCTGCAAAAGTGGCCAAGCCACATCTCTCGAGACTGCAAGGGCCCTGGAGGCGCTGGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS CCA 90 bp | CTGTGCCTCCCAGCGCCTCCAGGGCCCTTGCAGTCTCGAGAGATGTaGCTTGGCCACTTTTGCAGATTCCCAGGCCTGGGGCCACTCAGT | + |
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Preference number: 5 (lower is better) Translates to: LCLPAPPGPLQSREM*LGHFCRFPGLGPLS Trigger: ACTGAGTGGCCCCAGGCCTGGGAATCTGCAAAAGTGGCCAAGCCACATCTCTCGAGACTGCAAGGGCCCTGGAGGCGCTGGGAGGCACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS CCA 90 bp | GACAGGGTGGTGAGGACATCCCGGTTCCCACGAAAAGCAACCGCCTaGCAAGTCTGGAGCAGGCGAAGAGGGAGTGAGGGGGTGTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: DRVVRTSRFPRKATA*QVWSRRRGSEGVWL Trigger: GAGCCACACCCCCTCACTCCCTCTTCGCCTGCTCCAGACTTGCCAGGCGGTTGCTTTTCGTGGGAACCGGGATGTCCTCACCACCCTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 90 bp | AGTCTCGAGAGATGTGGCTTGGCCACTTTTGCAGATTCCCAGGCCTaGGGCCACTCAGTTGCCTCCCCCAGCCCAGGTGTCTCCTCGGGA | + |
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Preference number: 5 (lower is better) Translates to: SLERCGLATFADSQA*GHSVASPSPGVSSG Trigger: TCCCGAGGAGACACCTGGGCTGGGGGAGGCAACTGAGTGGCCCCAGGCCTGGGAATCTGCAAAAGTGGCCAAGCCACATCTCTCGAGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS CCA 90 bp | GGGGACTGCTATGCCCACTGGGCACTGCAGAACTTCTGGTGCGTGTaGCTAAGGGGAGTCGGGAAGAGCCCTGTCCCTGGACCAGACCTT | + |
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Preference number: 5 (lower is better) Translates to: GDCYAHWALQNFWCV*LRGVGKSPVPGPDL Trigger: AAGGTCTGGTCCAGGGACAGGGCTCTTCCCGACTCCCCTTAGCCACACGCACCAGAAGTTCTGCAGTGCCCAGTGGGCATAGCAGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS TCA 90 bp | AGGAGCTGGCCTGGCCCGGAGTGTCTTCTCCGTAAACACACCTGGTaGGGAAGAACAGGAAGGACGGACAAAGGGAGGCCTCAGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: RSWPGPECLLRKHTW*GRTGRTDKGRPQAQ Trigger: CTGGGCCTGAGGCCTCCCTTTGTCCGTCCTTCCTGTTCTTCCTCACCAGGTGTGTTTACGGAGAAGACACTCCGGGCCAGGCCAGCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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| CDS CCA 90 bp | CGGGAAGAGCCCTGTCCCTGGACCAGACCTTCCTGTTGGGAGTACTaGGACCCAGTGACCTTGTGCACCTTTCCTGAAGCTTCTGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: REEPCPWTRPSCWEY*DPVTLCTFPEASGP Trigger: GGGCCCAGAAGCTTCAGGAAAGGTGCACAAGGTCACTGGGTCCCAGTACTCCCAACAGGAAGGTCTGGTCCAGGGACAGGGCTCTTCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 90 bp | CTTCTGGTGCGTGTGGCTAAGGGGAGTCGGGAAGAGCCCTGTCCCTaGACCAGACCTTCCTGTTGGGAGTACTGGGACCCAGTGACCTTG | + |
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Preference number: 5 (lower is better) Translates to: LLVRVAKGSREEPCP*TRPSCWEYWDPVTL Trigger: CAAGGTCACTGGGTCCCAGTACTCCCAACAGGAAGGTCTGGTCCAGGGACAGGGCTCTTCCCGACTCCCCTTAGCCACACGCACCAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS TCA 90 bp | CCTGTCCCTGGACCAGACCTTCCTGTTGGGAGTACTGGGACCCAGTaGCCTTGTGCACCTTTCCTGAAGCTTCTGGGCCCCAAGTGGTCG | + |
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Preference number: 5 (lower is better) Translates to: PVPGPDLPVGSTGTQ*PCAPFLKLLGPKWS Trigger: CGACCACTTGGGGCCCAGAAGCTTCAGGAAAGGTGCACAAGGTCACTGGGTCCCAGTACTCCCAACAGGAAGGTCTGGTCCAGGGACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 90 bp | CTCTCGCCAGCTGGCCTCACAAAGGTGCCCAGGAGGAGACCTGATTaGCGACTCCTTTCCCCTCCCTGGCTGAGCAGATTCTACAACAGC | + |
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Preference number: 5 (lower is better) Translates to: LSPAGLTKVPRRRPD*RLLSPPWLSRFYNS Trigger: GCTGTTGTAGAATCTGCTCAGCCAGGGAGGGGAAAGGAGTCGGCAATCAGGTCTCCTCCTGGGCACCTTTGTGAGGCCAGCTGGCGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 90 bp | TCACAGACTGTGCTTCCTGCTTTCAACCTCCGTTCCAGGTTCCTGTaGGTTCCGTGGGCCCATCCACCTGGCTGGGCTTGGCTAGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SQTVLPAFNLRSRFL*VPWAHPPGWAWLGC Trigger: ACAGCCTAGCCAAGCCCAGCCAGGTGGATGGGCCCACGGAACGCACAGGAACCTGGAACGGAGGTTGAAAGCAGGAAGCACAGTCTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 90 bp | GTGGTCGAATGCAGAGTGGGCTGGGGAGTCACAGACTGTGCTTCCTaGTTTCAACCTCCGTTCCAGGTTCCTGTGCGTTCCGTGGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: VVECRVGWGVTDCAS*FQPPFQVPVRSVGP Trigger: TGGGCCCACGGAACGCACAGGAACCTGGAACGGAGGTTGAAAGCAGGAAGCACAGTCTGTGACTCCCCAGCCCACTCTGCATTCGACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 90 bp | ATTCTTGGGGACTGCTATGCCCACTGGGCACTGCAGAACTTCTGGTaGGTGTGGCTAAGGGGAGTCGGGAAGAGCCCTGTCCCTGGACCA | + |
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Preference number: 5 (lower is better) Translates to: ILGDCYAHWALQNFW*VWLRGVGKSPVPGP Trigger: TGGTCCAGGGACAGGGCTCTTCCCGACTCCCCTTAGCCACACGCACCAGAAGTTCTGCAGTGCCCAGTGGGCATAGCAGTCCCCAAGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 90 bp | GTCATTCTTGGGGACTGCTATGCCCACTGGGCACTGCAGAACTTCTaGTGCGTGTGGCTAAGGGGAGTCGGGAAGAGCCCTGTCCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: VILGDCYAHWALQNF*CVWLRGVGKSPVPG Trigger: TCCAGGGACAGGGCTCTTCCCGACTCCCCTTAGCCACACGCACCAGAAGTTCTGCAGTGCCCAGTGGGCATAGCAGTCCCCAAGAATGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 90 bp | GCTCAGCTTCAGTGCTGGGTCATTCTTGGGGACTGCTATGCCCACTaGGCACTGCAGAACTTCTGGTGCGTGTGGCTAAGGGGAGTCGGG | + |
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Preference number: 5 (lower is better) Translates to: AQLQCWVILGDCYAH*ALQNFWCVWLRGVG Trigger: CCCGACTCCCCTTAGCCACACGCACCAGAAGTTCTGCAGTGCCCAGTGGGCATAGCAGTCCCCAAGAATGACCCAGCACTGAAGCTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS TCA 90 bp | TTCCTGTTGGGAGTACTGGGACCCAGTGACCTTGTGCACCTTTCCTaGAGCTTCTGGGCCCCAAGTGGTCGAATGCAGAGTGGGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: FLLGVLGPSDLVHLS*SFWAPSGRMQSGLG Trigger: CCCCAGCCCACTCTGCATTCGACCACTTGGGGCCCAGAAGCTTCAGGAAAGGTGCACAAGGTCACTGGGTCCCAGTACTCCCAACAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 90 bp | AAGGGGAGTCGGGAAGAGCCCTGTCCCTGGACCAGACCTTCCTGTTaGGAGTACTGGGACCCAGTGACCTTGTGCACCTTTCCTGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: KGSREEPCPWTRPSC*EYWDPVTLCTFPEA Trigger: AGCTTCAGGAAAGGTGCACAAGGTCACTGGGTCCCAGTACTCCCAACAGGAAGGTCTGGTCCAGGGACAGGGCTCTTCCCGACTCCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 90 bp | ATGACAACACGCTCGTGCCACACCTCGATAGAGCTTCAGTCACTCTaGTGTGGAGCGTGCGAGGCTGACCATCCTAGGCCTTGGGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: MTTRSCHTSIELQSL*CGACEADHPRPWGE Trigger: TTCTCCCCAAGGCCTAGGATGGTCAGCCTCGCACGCTCCACAGCAGAGTGACTGAAGCTCTATCGAGGTGTGGCACGAGCGTGTTGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 90 bp | CGGGAGACACAGCCAGCCTTCCCTCCCCAGGAAAGGGCCAGGCCCTaGATAGGAGCTTTCATTAAAAACCAGGGAGGCTGCAGATTCTCT | + |
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Preference number: 5 (lower is better) Translates to: RETQPAFPPQERARP*IGAFIKNQGGCRFS Trigger: AGAGAATCTGCAGCCTCCCTGGTTTTTAATGAAAGCTCCTATGCAGGGCCTGGCCCTTTCCTGGGGAGGGAAGGCTGGCTGTGTCTCCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 90 bp | GAACAGGCAGCCACAGAGACTGGGTTTAGACTTGCCGGGGAAGGCTaGATCCAAAGTGGGGCCAGCTCAGAACTATTCCACCACATGGGG | + |
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Preference number: 5 (lower is better) Translates to: EQAATETGFRLAGEG*IQSGASSELFHHMG Trigger: CCCCATGTGGTGGAATAGTTCTGAGCTGGCCCCACTTTGGATGCAGCCTTCCCCGGCAAGTCTAAACCCAGTCTCTGTGGCTGCCTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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| CDS GCA 90 bp | TCGTGCCACACCTCGATAGAGCTTCAGTCACTCTGCTGTGGAGCGTaGGAGGCTGACCATCCTAGGCCTTGGGGAGAAATCATGACAGCT | + |
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Preference number: 5 (lower is better) Translates to: SCHTSIELQSLCCGA*EADHPRPWGEIMTA Trigger: AGCTGTCATGATTTCTCCCCAAGGCCTAGGATGGTCAGCCTCGCACGCTCCACAGCAGAGTGACTGAAGCTCTATCGAGGTGTGGCACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 90 bp | TTCTTTGGCTCAGCTTCAGTGCTGGGTCATTCTTGGGGACTGCTATaGCCACTGGGCACTGCAGAACTTCTGGTGCGTGTGGCTAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: FFGSASVLGHSWGLL*PLGTAELLVRVAKG Trigger: CCCCTTAGCCACACGCACCAGAAGTTCTGCAGTGCCCAGTGGGCATAGCAGTCCCCAAGAATGACCCAGCACTGAAGCTGAGCCAAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 90 bp | ACAAAGACAGCGTGTTCCTCAAGCCCCTGCCTACCGCTCCGTCACTaGGGCCATGGTCTGCGTGCCAACAACCTTTTAGGAAGCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: TKTACSSSPCLPLRH*GHGLRANNLLGSIL Trigger: CAAGATGCTTCCTAAAAGGTTGTTGGCACGCAGACCATGGCCCCAGTGACGGAGCGGTAGGCAGGGGCTTGAGGAACACGCTGTCTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS TCA 90 bp | AGTGGACAGTACCCTCAGGGGCTCTTGGGGCTGAGACCTCTTCCATaGATCACGTATGGAAGCCCAGGACCAACCTCAGAGAGGATCATG | + |
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Preference number: 5 (lower is better) Translates to: SGQYPQGLLGLRPLP*ITYGSPGPTSERIM Trigger: CATGATCCTCTCTGAGGTTGGTCCTGGGCTTCCATACGTGATTCATGGAAGAGGTCTCAGCCCCAAGAGCCCCTGAGGGTACTGTCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000421538.1 ENST00000444890.1 ENST00000609737.1 |
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| CDS GCA 90 bp | CCCGCCGCCTCTGAGAAAGGATCTTGGGGTTCATTGGCAGGTAAATaGTCCCCCAAAGGAGGTCCACTGTGGATGCTGGAAACGAACTGT | + |
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Preference number: 5 (lower is better) Translates to: PAASEKGSWGSLAGK*SPKGGPLWMLETNC Trigger: ACAGTTCGTTTCCAGCATCCACAGTGGACCTCCTTTGGGGGAGCATTTACCTGCCAATGAACCCCAAGATCCTTTCTCAGAGGCGGCGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 90 bp | CCAAGTTCTTTGGCTCAGCTTCAGTGCTGGGTCATTCTTGGGGACTaGTATGCCCACTGGGCACTGCAGAACTTCTGGTGCGTGTGGCTA | + |
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Preference number: 5 (lower is better) Translates to: PSSLAQLQCWVILGD*YAHWALQNFWCVWL Trigger: TAGCCACACGCACCAGAAGTTCTGCAGTGCCCAGTGGGCATAGCAGTCCCCAAGAATGACCCAGCACTGAAGCTGAGCCAAAGAACTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 90 bp | CAGTCACTCTGCTGTGGAGCGTGCGAGGCTGACCATCCTAGGCCTTaGGGAGAAATCATGACAGCTGATGCCAGTGCTTGTTACTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: QSLCCGACEADHPRP*GEIMTADASACYWE Trigger: TTCCCAGTAACAAGCACTGGCATCAGCTGTCATGATTTCTCCCCAAGGCCTAGGATGGTCAGCCTCGCACGCTCCACAGCAGAGTGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS TCA 90 bp | CTTCCTGCCTGTTTGTATTTAAGACAAGGTCTCTCACTGCAGCTTTaGCCTCCCGGGCTTGAGCAGTCTTCCCACCTCAGCCTCTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: LPACLYLRQGLSLQL*PPGLEQSSHLSLWS Trigger: ACTCCAGAGGCTGAGGTGGGAAGACTGCTCAAGCCCGGGAGGTCAAAGCTGCAGTGAGAGACCTTGTCTTAAATACAAACAGGCAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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| CDS TCA 90 bp | CCCCCAAAGGAGGTCCACTGTGGATGCTGGAAACGAACTGTCAGCTaGCAAGCATCTGTAGCTCTGAAAACAAGGGCTCCACACATTGTC | + |
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Preference number: 5 (lower is better) Translates to: PPKEVHCGCWKRTVS*QASVALKTRAPHIV Trigger: GACAATGTGTGGAGCCCTTGTTTTCAGAGCTACAGATGCTTGTCAGCTGACAGTTCGTTTCCAGCATCCACAGTGGACCTCCTTTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS TCA 90 bp | GGCAGCATTCAGCACCCACGTGGCAGAGCCAAGGCTGGACAGGGATaGTTCCAACATCCAGGATTGTATTATGCTTATAACGACTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GSIQHPRGRAKAGQG*FQHPGLYYAYNDFL Trigger: CAGGAAGTCGTTATAAGCATAATACAATCCTGGATGTTGGAATCATCCCTGTCCAGCCTTGGCTCTGCCACGTGGGTGCTGAATGCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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| CDS TCA 90 bp | TGCATAGGAGCTTTCATTAAAAACCAGGGAGGCTGCAGATTCTCTTaGAATGACAACACGCTCGTGCCACACCTCGATAGAGCTTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: CIGAFIKNQGGCRFS*NDNTLVPHLDRASV Trigger: GACTGAAGCTCTATCGAGGTGTGGCACGAGCGTGTTGTCATTTCAAGAGAATCTGCAGCCTCCCTGGTTTTTAATGAAAGCTCCTATGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS TCA 90 bp | TCACAAATGGGAAAGCTGAGGCGGCAGCAGGTTAAGGACACTTTGTaGTGTAGCGTTCTCTCCCAGTGCTTTCGTACTGTAAACATCACA | + |
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Preference number: 5 (lower is better) Translates to: SQMGKLRRQQVKDTL*CSVLSQCFRTVNIT Trigger: TGTGATGTTTACAGTACGAAAGCACTGGGAGAGAACGCTACATCACAAAGTGTCCTTAACCTGCTGCCGCCTCAGCTTTCCCATTTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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| CDS CCA 90 bp | ATGATAAACGTGACAATCAAAGGCACTTTTTATTTATCGAATACCTaGTTCATGCCACATCTCCTGCTAGGCCCTCCCAGCGTGCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: MINVTIKGTFYLSNT*FMPHLLLGPPSVLA Trigger: AGCCAGCACGCTGGGAGGGCCTAGCAGGAGATGTGGCATGAACCAGGTATTCGATAAATAAAAAGTGCCTTTGATTGTCACGTTTATCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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| CDS GCA 90 bp | GATGATTCCAACATCCAGGATTGTATTATGCTTATAACGACTTCCTaGCTGTTTGTATTTAAGACAAGGTCTCTCACTGCAGCTTTGACC | + |
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Preference number: 5 (lower is better) Translates to: DDSNIQDCIMLITTS*LFVFKTRSLTAALT Trigger: GGTCAAAGCTGCAGTGAGAGACCTTGTCTTAAATACAAACAGGCAGGAAGTCGTTATAAGCATAATACAATCCTGGATGTTGGAATCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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| CDS CCA 72 bp | CTGAGGGCACCGTGGGCCTGGGCCCGGGACCCAGCATaGAACCCCTTCTCCTGGAGCACCAGGGGTCACAAC | + |
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Preference number: 6 (lower is better) Translates to: LRAPWAWARDPA*NPFSWSTRGHN Trigger: GTTGTGACCCCTGGTGCTCCAGGAGAAGGGGTTCCATGCTGGGTCCCGGGCCCAGGCCCACGGTGCCCTCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS TCA 72 bp | CCAGCAAATCATTCCGCAAGGTGGAGAACTGCAGGCTaGGGGCACCGTGGGCCTGGGCCCGGGACCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: PANHSARWRTAG*GHRGPGPGTQH Trigger: ATGCTGGGTCCCGGGCCCAGGCCCACGGTGCCCTCAGCCTGCAGTTCTCCACCTTGCGGAATGATTTGCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS CAA 90 bp | GCCTCCCAGCGCCTCCAGGGCCCTTGCAGTCTCGAGAGATGTGGCTaGGCCACTTTTGCAGATTCCCAGGCCTGGGGCCACTCAGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: ASQRLQGPCSLERCG*ATFADSQAWGHSVA Trigger: GGCAACTGAGTGGCCCCAGGCCTGGGAATCTGCAAAAGTGGCCAAGCCACATCTCTCGAGACTGCAAGGGCCCTGGAGGCGCTGGGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS TCA 72 bp | GGGTCACAACAGTCCCTCCACTCCAGGGATCACGGGTaGCCCACGGCCGGGTGCTTTGGGGACGAGACAAAG | + |
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Preference number: 6 (lower is better) Translates to: GSQQSLHSRDHG*PTAGCFGDETK Trigger: CTTTGTCTCGTCCCCAAAGCACCCGGCCGTGGGTCACCCGTGATCCCTGGAGTGGAGGGACTGTTGTGACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS CCA 72 bp | CTCCAGGGATCACGGGTGACCCACGGCCGGGTGCTTTaGGGACGAGACAAAGACAGCGTGTTCCTCAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: LQGSRVTHGRVL*GRDKDSVFLKP Trigger: GGGCTTGAGGAACACGCTGTCTTTGTCTCGTCCCCAAAGCACCCGGCCGTGGGTCACCCGTGATCCCTGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS CCA 72 bp | CCAGCGCCTCCAGGGCCCTTGCAGTCTCGAGAGATGTaGCTTGGCCACTTTTGCAGATTCCCAGGCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: PAPPGPLQSREM*LGHFCRFPGLG Trigger: CCCCAGGCCTGGGAATCTGCAAAAGTGGCCAAGCCACATCTCTCGAGACTGCAAGGGCCCTGGAGGCGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS CCA 72 bp | AGTGTGGGGCCCTTCTGCACACCGGCCCTCTACCACTaGGCAAGCCACACAGCCACAAAGTCAGCCCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: SVGPFCTPALYH*ASHTATKSALD Trigger: GTCCAGGGCTGACTTTGTGGCTGTGTGGCTTGCCCAGTGGTAGAGGGCCGGTGTGCAGAAGGGCCCCACACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CAA 90 bp | AGTCCCTCCACTCCAGGGATCACGGGTGACCCACGGCCGGGTGCTTaGGGGACGAGACAAAGACAGCGTGTTCCTCAAGCCCCTGCCTAC | + |
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Preference number: 6 (lower is better) Translates to: SPSTPGITGDPRPGA*GTRQRQRVPQAPAY Trigger: GTAGGCAGGGGCTTGAGGAACACGCTGTCTTTGTCTCGTCCCCAAAGCACCCGGCCGTGGGTCACCCGTGATCCCTGGAGTGGAGGGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS GCA 72 bp | GTGCTTCCTGCTTTCAACCTCCGTTCCAGGTTCCTGTaGGTTCCGTGGGCCCATCCACCTGGCTGGGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: VLPAFNLRSRFL*VPWAHPPGWAW Trigger: CCAAGCCCAGCCAGGTGGATGGGCCCACGGAACGCACAGGAACCTGGAACGGAGGTTGAAAGCAGGAAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 72 bp | GCTTTCAACCTCCGTTCCAGGTTCCTGTGCGTTCCGTaGGCCCATCCACCTGGCTGGGCTTGGCTAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: AFNLRSRFLCVP*AHPPGWAWLGC Trigger: ACAGCCTAGCCAAGCCCAGCCAGGTGGATGGGCCCACGGAACGCACAGGAACCTGGAACGGAGGTTGAAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 72 bp | CGTGTGGCTAAGGGGAGTCGGGAAGAGCCCTGTCCCTaGACCAGACCTTCCTGTTGGGAGTACTGGGACCCA | + |
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Preference number: 6 (lower is better) Translates to: RVAKGSREEPCP*TRPSCWEYWDP Trigger: TGGGTCCCAGTACTCCCAACAGGAAGGTCTGGTCCAGGGACAGGGCTCTTCCCGACTCCCCTTAGCCACACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 72 bp | GGGGACTGCTATGCCCACTGGGCACTGCAGAACTTCTaGTGCGTGTGGCTAAGGGGAGTCGGGAAGAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: GDCYAHWALQNF*CVWLRGVGKSP Trigger: AGGGCTCTTCCCGACTCCCCTTAGCCACACGCACCAGAAGTTCTGCAGTGCCCAGTGGGCATAGCAGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CAA 72 bp | ACTCCAGGGATCACGGGTGACCCACGGCCGGGTGCTTaGGGGACGAGACAAAGACAGCGTGTTCCTCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: TPGITGDPRPGA*GTRQRQRVPQA Trigger: GGCTTGAGGAACACGCTGTCTTTGTCTCGTCCCCAAAGCACCCGGCCGTGGGTCACCCGTGATCCCTGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS GCA 72 bp | CGCTCGTGCCACACCTCGATAGAGCTTCAGTCACTCTaGTGTGGAGCGTGCGAGGCTGACCATCCTAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: RSCHTSIELQSL*CGACEADHPRP Trigger: AGGCCTAGGATGGTCAGCCTCGCACGCTCCACAGCAGAGTGACTGAAGCTCTATCGAGGTGTGGCACGAGCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 72 bp | GCTGGCCTCACAAAGGTGCCCAGGAGGAGACCTGATTaGCGACTCCTTTCCCCTCCCTGGCTGAGCAGATTC | + |
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Preference number: 6 (lower is better) Translates to: AGLTKVPRRRPD*RLLSPPWLSRF Trigger: GAATCTGCTCAGCCAGGGAGGGGAAAGGAGTCGGCAATCAGGTCTCCTCCTGGGCACCTTTGTGAGGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 72 bp | GACTGCTATGCCCACTGGGCACTGCAGAACTTCTGGTaGGTGTGGCTAAGGGGAGTCGGGAAGAGCCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: DCYAHWALQNFW*VWLRGVGKSPV Trigger: GACAGGGCTCTTCCCGACTCCCCTTAGCCACACGCACCAGAAGTTCTGCAGTGCCCAGTGGGCATAGCAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 72 bp | GCGTGTTCCTCAAGCCCCTGCCTACCGCTCCGTCACTaGGGCCATGGTCTGCGTGCCAACAACCTTTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: ACSSSPCLPLRH*GHGLRANNLLG Trigger: TCCTAAAAGGTTGTTGGCACGCAGACCATGGCCCCAGTGACGGAGCGGTAGGCAGGGGCTTGAGGAACACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS CCA 72 bp | TATGCCCACTGGGCACTGCAGAACTTCTGGTGCGTGTaGCTAAGGGGAGTCGGGAAGAGCCCTGTCCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: YAHWALQNFWCV*LRGVGKSPVPG Trigger: TCCAGGGACAGGGCTCTTCCCGACTCCCCTTAGCCACACGCACCAGAAGTTCTGCAGTGCCCAGTGGGCATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS TCA 72 bp | GGACCAGACCTTCCTGTTGGGAGTACTGGGACCCAGTaGCCTTGTGCACCTTTCCTGAAGCTTCTGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GPDLPVGSTGTQ*PCAPFLKLLGP Trigger: GGGGCCCAGAAGCTTCAGGAAAGGTGCACAAGGTCACTGGGTCCCAGTACTCCCAACAGGAAGGTCTGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 72 bp | CAGCCAGCCTTCCCTCCCCAGGAAAGGGCCAGGCCCTaGATAGGAGCTTTCATTAAAAACCAGGGAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QPAFPPQERARP*IGAFIKNQGGC Trigger: GCAGCCTCCCTGGTTTTTAATGAAAGCTCCTATGCAGGGCCTGGCCCTTTCCTGGGGAGGGAAGGCTGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CAA 72 bp | CCTGTGAACAGGCAGCCACAGAGACTGGGTTTAGACTaGCCGGGGAAGGCTGCATCCAAAGTGGGGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PVNRQPQRLGLD*PGKAASKVGPA Trigger: AGCTGGCCCCACTTTGGATGCAGCCTTCCCCGGCAAGTCTAAACCCAGTCTCTGTGGCTGCCTGTTCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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| CDS CAA 90 bp | CCCTGGACCAGACCTTCCTGTTGGGAGTACTGGGACCCAGTGACCTaGTGCACCTTTCCTGAAGCTTCTGGGCCCCAAGTGGTCGAATGC | + |
|
Preference number: 6 (lower is better) Translates to: PWTRPSCWEYWDPVT*CTFPEASGPQVVEC Trigger: GCATTCGACCACTTGGGGCCCAGAAGCTTCAGGAAAGGTGCACAAGGTCACTGGGTCCCAGTACTCCCAACAGGAAGGTCTGGTCCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CAA 90 bp | TCCACGGTCCCTGTGAACAGGCAGCCACAGAGACTGGGTTTAGACTaGCCGGGGAAGGCTGCATCCAAAGTGGGGCCAGCTCAGAACTAT | + |
|
Preference number: 6 (lower is better) Translates to: STVPVNRQPQRLGLD*PGKAASKVGPAQNY Trigger: ATAGTTCTGAGCTGGCCCCACTTTGGATGCAGCCTTCCCCGGCAAGTCTAAACCCAGTCTCTGTGGCTGCCTGTTCACAGGGACCGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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| CDS TCA 72 bp | CCTGGCCCGGAGTGTCTTCTCCGTAAACACACCTGGTaGGGAAGAACAGGAAGGACGGACAAAGGGAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGPECLLRKHTW*GRTGRTDKGRP Trigger: AGGCCTCCCTTTGTCCGTCCTTCCTGTTCTTCCTCACCAGGTGTGTTTACGGAGAAGACACTCCGGGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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| CDS GCA 72 bp | CTGCCTACCGCTCCGTCACTGGGGCCATGGTCTGCGTaGCAACAACCTTTTAGGAAGCATCTTGTGCCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LPTAPSLGPWSA*QQPFRKHLVPN Trigger: GTTGGGCACAAGATGCTTCCTAAAAGGTTGTTGGCACGCAGACCATGGCCCCAGTGACGGAGCGGTAGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421538.1 |
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| CDS GCA 72 bp | TGCAGAGTGGGCTGGGGAGTCACAGACTGTGCTTCCTaGTTTCAACCTCCGTTCCAGGTTCCTGTGCGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CRVGWGVTDCAS*FQPPFQVPVRS Trigger: GGAACGCACAGGAACCTGGAACGGAGGTTGAAAGCAGGAAGCACAGTCTGTGACTCCCCAGCCCACTCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 72 bp | ACCTTTCCTGAAGCTTCTGGGCCCCAAGTGGTCGAATaGAGAGTGGGCTGGGGAGTCACAGACTGTGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TFPEASGPQVVE*RVGWGVTDCAS Trigger: GGAAGCACAGTCTGTGACTCCCCAGCCCACTCTGCATTCGACCACTTGGGGCCCAGAAGCTTCAGGAAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 72 bp | CCCTGTCCCTGGACCAGACCTTCCTGTTGGGAGTACTaGGACCCAGTGACCTTGTGCACCTTTCCTGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PCPWTRPSCWEY*DPVTLCTFPEA Trigger: AGCTTCAGGAAAGGTGCACAAGGTCACTGGGTCCCAGTACTCCCAACAGGAAGGTCTGGTCCAGGGACAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 72 bp | CAGTGCTGGGTCATTCTTGGGGACTGCTATGCCCACTaGGCACTGCAGAACTTCTGGTGCGTGTGGCTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: QCWVILGDCYAH*ALQNFWCVWLR Trigger: CCTTAGCCACACGCACCAGAAGTTCTGCAGTGCCCAGTGGGCATAGCAGTCCCCAAGAATGACCCAGCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS TCA 72 bp | TACCCTCAGGGGCTCTTGGGGCTGAGACCTCTTCCATaGATCACGTATGGAAGCCCAGGACCAACCTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: YPQGLLGLRPLP*ITYGSPGPTSE Trigger: CTCTGAGGTTGGTCCTGGGCTTCCATACGTGATTCATGGAAGAGGTCTCAGCCCCAAGAGCCCCTGAGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000421538.1 ENST00000444890.1 ENST00000609737.1 |
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| CDS TCA 72 bp | GGAGTACTGGGACCCAGTGACCTTGTGCACCTTTCCTaGAGCTTCTGGGCCCCAAGTGGTCGAATGCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GVLGPSDLVHLS*SFWAPSGRMQS Trigger: ACTCTGCATTCGACCACTTGGGGCCCAGAAGCTTCAGGAAAGGTGCACAAGGTCACTGGGTCCCAGTACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 72 bp | ACCTCGATAGAGCTTCAGTCACTCTGCTGTGGAGCGTaGGAGGCTGACCATCCTAGGCCTTGGGGAGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: TSIELQSLCCGA*EADHPRPWGEI Trigger: GATTTCTCCCCAAGGCCTAGGATGGTCAGCCTCGCACGCTCCACAGCAGAGTGACTGAAGCTCTATCGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 72 bp | TCAGCTTCAGTGCTGGGTCATTCTTGGGGACTGCTATaGCCACTGGGCACTGCAGAACTTCTGGTGCGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SASVLGHSWGLL*PLGTAELLVRV Trigger: CACACGCACCAGAAGTTCTGCAGTGCCCAGTGGGCATAGCAGTCCCCAAGAATGACCCAGCACTGAAGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 72 bp | TTGGCTCAGCTTCAGTGCTGGGTCATTCTTGGGGACTaGTATGCCCACTGGGCACTGCAGAACTTCTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LAQLQCWVILGD*YAHWALQNFWC Trigger: GCACCAGAAGTTCTGCAGTGCCCAGTGGGCATAGCAGTCCCCAAGAATGACCCAGCACTGAAGCTGAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 72 bp | GCCACAGAGACTGGGTTTAGACTTGCCGGGGAAGGCTaGATCCAAAGTGGGGCCAGCTCAGAACTATTCCAC | + |
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Preference number: 6 (lower is better) Translates to: ATETGFRLAGEG*IQSGASSELFH Trigger: GTGGAATAGTTCTGAGCTGGCCCCACTTTGGATGCAGCCTTCCCCGGCAAGTCTAAACCCAGTCTCTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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| CDS CCA 72 bp | TGCTGTGGAGCGTGCGAGGCTGACCATCCTAGGCCTTaGGGAGAAATCATGACAGCTGATGCCAGTGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CCGACEADHPRP*GEIMTADASAC Trigger: ACAAGCACTGGCATCAGCTGTCATGATTTCTCCCCAAGGCCTAGGATGGTCAGCCTCGCACGCTCCACAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CAA 72 bp | CATCCCGCCGCCTCTGAGAAAGGATCTTGGGGTTCATaGGCAGGTAAATGCTCCCCCAAAGGAGGTCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: HPAASEKGSWGS*AGKCSPKGGPL Trigger: CAGTGGACCTCCTTTGGGGGAGCATTTACCTGCCAATGAACCCCAAGATCCTTTCTCAGAGGCGGCGGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CAA 72 bp | AGACCTTCCTGTTGGGAGTACTGGGACCCAGTGACCTaGTGCACCTTTCCTGAAGCTTCTGGGCCCCAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RPSCWEYWDPVT*CTFPEASGPQV Trigger: CACTTGGGGCCCAGAAGCTTCAGGAAAGGTGCACAAGGTCACTGGGTCCCAGTACTCCCAACAGGAAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 72 bp | ATCCCGCCGCCTCTGAGAAAGGATCTTGGGGTTCATTaGCAGGTAAATGCTCCCCCAAAGGAGGTCCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: IPPPLRKDLGVH*QVNAPPKEVHC Trigger: ACAGTGGACCTCCTTTGGGGGAGCATTTACCTGCCAATGAACCCCAAGATCCTTTCTCAGAGGCGGCGGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 72 bp | GCTCTTGGGGCTGAGACCTCTTCCATGAATCACGTATaGAAGCCCAGGACCAACCTCAGAGAGGATCATGTC | + |
|
Preference number: 6 (lower is better) Translates to: ALGAETSSMNHV*KPRTNLREDHV Trigger: GACATGATCCTCTCTGAGGTTGGTCCTGGGCTTCCATACGTGATTCATGGAAGAGGTCTCAGCCCCAAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421538.1 ENST00000444890.1 ENST00000609737.1 |
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| CDS TCA 72 bp | GTGACGGTTCCCTTTGGGACACACTCTAATCACCAGTaGCCACCAGTCAGAAAACAAATGGGCTCAAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VTVPFGTHSNHQ*PPVRKQMGSSR Trigger: GCGGCTTGAGCCCATTTGTTTTCTGACTGGTGGTCACTGGTGATTAGAGTGTGTCCCAAAGGGAACCGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 72 bp | GGAAAACTTCATCCCGCCGCCTCTGAGAAAGGATCTTaGGGTTCATTGGCAGGTAAATGCTCCCCCAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GKLHPAASEKGS*GSLAGKCSPKG Trigger: TCCTTTGGGGGAGCATTTACCTGCCAATGAACCCCAAGATCCTTTCTCAGAGGCGGCGGGATGAAGTTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 72 bp | AAGTTCTTTGGCTCAGCTTCAGTGCTGGGTCATTCTTaGGGACTGCTATGCCCACTGGGCACTGCAGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: KFFGSASVLGHS*GLLCPLGTAEL Trigger: AAGTTCTGCAGTGCCCAGTGGGCATAGCAGTCCCCAAGAATGACCCAGCACTGAAGCTGAGCCAAAGAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 72 bp | AGGCAGCATTCAGCACCCACGTGGCAGAGCCAAGGCTaGACAGGGATGATTCCAACATCCAGGATTGTATTA | + |
|
Preference number: 6 (lower is better) Translates to: RQHSAPTWQSQG*TGMIPTSRIVL Trigger: TAATACAATCCTGGATGTTGGAATCATCCCTGTCCAGCCTTGGCTCTGCCACGTGGGTGCTGAATGCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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| CDS TCA 72 bp | TGTTTGTATTTAAGACAAGGTCTCTCACTGCAGCTTTaGCCTCCCGGGCTTGAGCAGTCTTCCCACCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CLYLRQGLSLQL*PPGLEQSSHLS Trigger: GCTGAGGTGGGAAGACTGCTCAAGCCCGGGAGGTCAAAGCTGCAGTGAGAGACCTTGTCTTAAATACAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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| CDS TCA 72 bp | GGAAAGCTGAGGCGGCAGCAGGTTAAGGACACTTTGTaGTGTAGCGTTCTCTCCCAGTGCTTTCGTACTGTA | + |
|
Preference number: 6 (lower is better) Translates to: GKLRRQQVKDTL*CSVLSQCFRTV Trigger: TACAGTACGAAAGCACTGGGAGAGAACGCTACATCACAAAGTGTCCTTAACCTGCTGCCGCCTCAGCTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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| CDS GCA 72 bp | TCTGAGAAAGGATCTTGGGGTTCATTGGCAGGTAAATaGTCCCCCAAAGGAGGTCCACTGTGGATGCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SEKGSWGSLAGK*SPKGGPLWMLE Trigger: TTCCAGCATCCACAGTGGACCTCCTTTGGGGGAGCATTTACCTGCCAATGAACCCCAAGATCCTTTCTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS GCA 72 bp | GAGGCTGCAGATTCTCTTGAAATGACAACACGCTCGTaGCACACCTCGATAGAGCTTCAGTCACTCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: EAADSLEMTTRS*HTSIELQSLCC Trigger: ACAGCAGAGTGACTGAAGCTCTATCGAGGTGTGGCACGAGCGTGTTGTCATTTCAAGAGAATCTGCAGCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CCA 72 bp | AGGTTCTCCAGCCCTTTGGAGCATCACACACGTTTGTaGGACAAAAGACAAATATTCCTCCCACCCCAATCC | + |
|
Preference number: 6 (lower is better) Translates to: RFSSPLEHHTRL*DKRQIFLPPQS Trigger: GGATTGGGGTGGGAGGAATATTTGTCTTTTGTCCCACAAACGTGTGTGATGCTCCAAAGGGCTGGAGAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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| CDS CAA 72 bp | GAGAGGTTCTCCAGCCCTTTGGAGCATCACACACGTTaGTGGGACAAAAGACAAATATTCCTCCCACCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: ERFSSPLEHHTR*WDKRQIFLPPQ Trigger: TTGGGGTGGGAGGAATATTTGTCTTTTGTCCCACAAACGTGTGTGATGCTCCAAAGGGCTGGAGAACCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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| CDS TCA 72 bp | GCTTTCATTAAAAACCAGGGAGGCTGCAGATTCTCTTaGAATGACAACACGCTCGTGCCACACCTCGATAGA | + |
|
Preference number: 6 (lower is better) Translates to: AFIKNQGGCRFS*NDNTLVPHLDR Trigger: TCTATCGAGGTGTGGCACGAGCGTGTTGTCATTTCAAGAGAATCTGCAGCCTCCCTGGTTTTTAATGAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000421538.1 ENST00000609737.1 |
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| CDS CAA 72 bp | AAAAATATCCACTTAAGAGAGAGGTTCTCCAGCCCTTaGGAGCATCACACACGTTTGTGGGACAAAAGACAA | + |
|
Preference number: 6 (lower is better) Translates to: KNIHLRERFSSP*EHHTRLWDKRQ Trigger: TTGTCTTTTGTCCCACAAACGTGTGTGATGCTCCAAAGGGCTGGAGAACCTCTCTCTTAAGTGGATATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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| CDS GCA 72 bp | AACATCCAGGATTGTATTATGCTTATAACGACTTCCTaGCTGTTTGTATTTAAGACAAGGTCTCTCACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: NIQDCIMLITTS*LFVFKTRSLTA Trigger: TGCAGTGAGAGACCTTGTCTTAAATACAAACAGGCAGGAAGTCGTTATAAGCATAATACAATCCTGGATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609737.1 |
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