Pregenerated sensors for LINC00896 (Homo sapiens)
Ensembl gene IDs: ENSG00000236499Ensembl transcript IDs: ENST00000423736.1, ENST00000609602.1
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCCAGGAAGGGGCGCCCAGGACTGCCCATGGGAGAAGGGCGTGGTaGCGACACGAGGTCACCTGGAGTCCCTGGGACTGGCCCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: GQEGAPRTAHGRRAW*RHEVTWSPWDWPST Trigger: GGTGGAGGGCCAGTCCCAGGGACTCCAGGTGACCTCGTGTCGGCACCACGCCCTTCTCCCATGGGCAGTCCTGGGCGCCCCTTCCTGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423736.1 ENST00000609602.1 |
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| CDS GCA 90 bp | GGCCACAGGCCACTGGGCCCAAGGCCAGGAAGGGGCGCCCAGGACTaGCCATGGGAGAAGGGCGTGGTGCCGACACGAGGTCACCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: GHRPLGPRPGRGAQD*PWEKGVVPTRGHLE Trigger: CTCCAGGTGACCTCGTGTCGGCACCACGCCCTTCTCCCATGGGCAGTCCTGGGCGCCCCTTCCTGGCCTTGGGCCCAGTGGCCTGTGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423736.1 ENST00000609602.1 |
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| CDS CCA 90 bp | CAAGGCCAGGAAGGGGCGCCCAGGACTGCCCATGGGAGAAGGGCGTaGTGCCGACACGAGGTCACCTGGAGTCCCTGGGACTGGCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: QGQEGAPRTAHGRRA*CRHEVTWSPWDWPS Trigger: GGAGGGCCAGTCCCAGGGACTCCAGGTGACCTCGTGTCGGCACCACGCCCTTCTCCCATGGGCAGTCCTGGGCGCCCCTTCCTGGCCTTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423736.1 ENST00000609602.1 |
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| CDS CCA 90 bp | AGGCCACTGGGCCCAAGGCCAGGAAGGGGCGCCCAGGACTGCCCATaGGAGAAGGGCGTGGTGCCGACACGAGGTCACCTGGAGTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: RPLGPRPGRGAQDCP*EKGVVPTRGHLESL Trigger: CAGGGACTCCAGGTGACCTCGTGTCGGCACCACGCCCTTCTCCCATGGGCAGTCCTGGGCGCCCCTTCCTGGCCTTGGGCCCAGTGGCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423736.1 ENST00000609602.1 |
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| CDS TCA 90 bp | CGACACGAGGTCACCTGGAGTCCCTGGGACTGGCCCTCCACCTCGTaGCTCAGTCGCCACCCGGTGGCCCTCTCAGAAGCCCAGGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: RHEVTWSPWDWPSTS*LSRHPVALSEAQGP Trigger: TGGGCCCTGGGCTTCTGAGAGGGCCACCGGGTGGCGACTGAGTCACGAGGTGGAGGGCCAGTCCCAGGGACTCCAGGTGACCTCGTGTCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423736.1 ENST00000609602.1 |
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| CDS CCA 90 bp | TCTCCAGCATGGGCTCCTGCTGCTGCTGGGACAACCAAGCAGGAGTaGACGGGGTCAGGCCACAGGCCACTGGGCCCAAGGCCAGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: SPAWAPAAAGTTKQE*TGSGHRPLGPRPGR Trigger: CCTTCCTGGCCTTGGGCCCAGTGGCCTGTGGCCTGACCCCGTCCACTCCTGCTTGGTTGTCCCAGCAGCAGCAGGAGCCCATGCTGGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS GCA 90 bp | CGGGCCCTCCACCTGCCCCATAACACCTTCTCCAGCATGGGCTCCTaGTGCTGCTGGGACAACCAAGCAGGAGTGGACGGGGTCAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: RALHLPHNTFSSMGS*CCWDNQAGVDGVRP Trigger: TGGCCTGACCCCGTCCACTCCTGCTTGGTTGTCCCAGCAGCAGCAGGAGCCCATGCTGGAGAAGGTGTTATGGGGCAGGTGGAGGGCCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS CCA 90 bp | ATCCAGCTCTGGGCAGTCAGGTCTGCCCAGTGGAGGTGTTTGCCCTaGGGGGCCGGCTCACCTATCCGTAGGACCTGGCTCCTAGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: IQLWAVRSAQWRCLP*GAGSPIRRTWLLGV Trigger: GACCCCTAGGAGCCAGGTCCTACGGATAGGTGAGCCGGCCCCCCAGGGCAAACACCTCCACTGGGCAGACCTGACTGCCCAGAGCTGGAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS CCA 90 bp | GAGTCAGCCGGGCCCTCCACCTGCCCCATAACACCTTCTCCAGCATaGGCTCCTGCTGCTGCTGGGACAACCAAGCAGGAGTGGACGGGG | + |
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Preference number: 5 (lower is better) Translates to: ESAGPSTCPITPSPA*APAAAGTTKQEWTG Trigger: CCCCGTCCACTCCTGCTTGGTTGTCCCAGCAGCAGCAGGAGCCCATGCTGGAGAAGGTGTTATGGGGCAGGTGGAGGGCCCGGCTGACTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS CCA 90 bp | GCCAGGTCAGGGCTGGCCCAGCAGGATGGGGGCTCTCTGCCTCTATaGCCAGCATTCCCAGCTGAGTCCCCAACTCTGCAGCCAGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: ARSGLAQQDGGSLPL*PAFPAESPTLQPGS Trigger: GCTTCCTGGCTGCAGAGTTGGGGACTCAGCTGGGAATGCTGGCCATAGAGGCAGAGAGCCCCCATCCTGCTGGGCCAGCCCTGACCTGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS GCA 90 bp | CTCCACCTGCCCCATAACACCTTCTCCAGCATGGGCTCCTGCTGCTaGTGGGACAACCAAGCAGGAGTGGACGGGGTCAGGCCACAGGCC | + |
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Preference number: 5 (lower is better) Translates to: LHLPHNTFSSMGSCC*WDNQAGVDGVRPQA Trigger: GGCCTGTGGCCTGACCCCGTCCACTCCTGCTTGGTTGTCCCAGCAGCAGCAGGAGCCCATGCTGGAGAAGGTGTTATGGGGCAGGTGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS GCA 90 bp | GCCCTCCACCTGCCCCATAACACCTTCTCCAGCATGGGCTCCTGCTaGTGCTGGGACAACCAAGCAGGAGTGGACGGGGTCAGGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: ALHLPHNTFSSMGSC*CWDNQAGVDGVRPQ Trigger: CTGTGGCCTGACCCCGTCCACTCCTGCTTGGTTGTCCCAGCAGCAGCAGGAGCCCATGCTGGAGAAGGTGTTATGGGGCAGGTGGAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS CCA 90 bp | CACCTGCCCCATAACACCTTCTCCAGCATGGGCTCCTGCTGCTGCTaGGACAACCAAGCAGGAGTGGACGGGGTCAGGCCACAGGCCACT | + |
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Preference number: 5 (lower is better) Translates to: HLPHNTFSSMGSCCC*DNQAGVDGVRPQAT Trigger: AGTGGCCTGTGGCCTGACCCCGTCCACTCCTGCTTGGTTGTCCCAGCAGCAGCAGGAGCCCATGCTGGAGAAGGTGTTATGGGGCAGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS GCA 90 bp | GCTGGGCCTGACCTCTCTGCAGGTGGTGTCACTGCAGGGCCACACTaGACTGTGCTGGTTGTTGTCCAGGGTGGGCAGATAGAGGGATGT | + |
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Preference number: 5 (lower is better) Translates to: AGPDLSAGGVTAGPH*TVLVVVQGGQIEGC Trigger: ACATCCCTCTATCTGCCCACCCTGGACAACAACCAGCACAGTGCAGTGTGGCCCTGCAGTGACACCACCTGCAGAGAGGTCAGGCCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS GCA 90 bp | GAAAAGAAACTTGGGGGATCATCTGAGTCAGCCGGGCCCTCCACCTaGCCCATAACACCTTCTCCAGCATGGGCTCCTGCTGCTGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: EKKLGGSSESAGPST*PITPSPAWAPAAAG Trigger: CCCAGCAGCAGCAGGAGCCCATGCTGGAGAAGGTGTTATGGGGCAGGTGGAGGGCCCGGCTGACTCAGATGATCCCCCAAGTTTCTTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS GCA 90 bp | CGAGCTGGTGACATTGTGGGGCTGGGATTAAATGGGATCTGCGGCTaGCAGGCTGGGCTTCTCAGGAATGAGCTGGCACTGGAGGACGAG | + |
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Preference number: 5 (lower is better) Translates to: RAGDIVGLGLNGICG*QAGLLRNELALEDE Trigger: CTCGTCCTCCAGTGCCAGCTCATTCCTGAGAAGCCCAGCCTGGCAGCCGCAGATCCCATTTAATCCCAGCCCCACAATGTCACCAGCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS CCA 90 bp | CATGAGTGCTCATCATCACACACACTCCAGAGGCTGAGAACATCTTaGAGGCCTGGGGCCTGCTGGCCAGACCCTGTCCTGGGCCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: HECSSSHTLQRLRTS*RPGACWPDPVLGPE Trigger: TTCAGGGCCCAGGACAGGGTCTGGCCAGCAGGCCCCAGGCCTCCAAGATGTTCTCAGCCTCTGGAGTGTGTGTGATGATGAGCACTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423736.1 ENST00000609602.1 |
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| CDS TCA 90 bp | GGTGGCCCTCTCAGAAGCCCAGGGCCCAGCATACAGGAAGCTCCATaGGTGCTCATCATCACACACACTCCAGAGGCTGAGAACATCTTG | + |
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Preference number: 5 (lower is better) Translates to: GGPLRSPGPSIQEAP*VLIITHTPEAENIL Trigger: CAAGATGTTCTCAGCCTCTGGAGTGTGTGTGATGATGAGCACTCATGGAGCTTCCTGTATGCTGGGCCCTGGGCTTCTGAGAGGGCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423736.1 ENST00000609602.1 |
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| CDS GCA 90 bp | GCCCTCTCAGAAGCCCAGGGCCCAGCATACAGGAAGCTCCATGAGTaGTCATCATCACACACACTCCAGAGGCTGAGAACATCTTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: ALSEAQGPAYRKLHE*SSSHTLQRLRTSWR Trigger: CCTCCAAGATGTTCTCAGCCTCTGGAGTGTGTGTGATGATGAGCACTCATGGAGCTTCCTGTATGCTGGGCCCTGGGCTTCTGAGAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423736.1 ENST00000609602.1 |
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| CDS TCA 90 bp | CAAATTGGATTAGTTGTGTTTAGAAAGCAGCAAAGCTGCTATATTTaGGCAAAGGCTCAGCAGATTACCCTGGGCCAAGAGGGTGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: QIGLVVFRKQQSCYI*AKAQQITLGQEGVC Trigger: GCAGACACCCTCTTGGCCCAGGGTAATCTGCTGAGCCTTTGCTCAAATATAGCAGCTTTGCTGCTTTCTAAACACAACTAATCCAATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS CCA 72 bp | GGCCCAAGGCCAGGAAGGGGCGCCCAGGACTGCCCATaGGAGAAGGGCGTGGTGCCGACACGAGGTCACCTG | + |
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Preference number: 6 (lower is better) Translates to: GPRPGRGAQDCP*EKGVVPTRGHL Trigger: CAGGTGACCTCGTGTCGGCACCACGCCCTTCTCCCATGGGCAGTCCTGGGCGCCCCTTCCTGGCCTTGGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423736.1 ENST00000609602.1 |
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| CDS CCA 72 bp | GAAGGGGCGCCCAGGACTGCCCATGGGAGAAGGGCGTaGTGCCGACACGAGGTCACCTGGAGTCCCTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: EGAPRTAHGRRA*CRHEVTWSPWD Trigger: GTCCCAGGGACTCCAGGTGACCTCGTGTCGGCACCACGCCCTTCTCCCATGGGCAGTCCTGGGCGCCCCTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423736.1 ENST00000609602.1 |
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| CDS CCA 72 bp | TGGGCAGTCAGGTCTGCCCAGTGGAGGTGTTTGCCCTaGGGGGCCGGCTCACCTATCCGTAGGACCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: WAVRSAQWRCLP*GAGSPIRRTWL Trigger: GAGCCAGGTCCTACGGATAGGTGAGCCGGCCCCCCAGGGCAAACACCTCCACTGGGCAGACCTGACTGCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS CCA 72 bp | GGGCTGGCCCAGCAGGATGGGGGCTCTCTGCCTCTATaGCCAGCATTCCCAGCTGAGTCCCCAACTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: GLAQQDGGSLPL*PAFPAESPTLQ Trigger: CTGCAGAGTTGGGGACTCAGCTGGGAATGCTGGCCATAGAGGCAGAGAGCCCCCATCCTGCTGGGCCAGCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS TCA 72 bp | TGTGGTTTCTGCCTCTGGCAGGAAAACCCAACACGATaGCTGCCCCTCGCAGGCCACAGTCAGCCCGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: CGFCLWQENPTR*LPLAGHSQPGP Trigger: GGGGCCGGGCTGACTGTGGCCTGCGAGGGGCAGTCATCGTGTTGGGTTTTCCTGCCAGAGGCAGAAACCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS GCA 72 bp | GTTTCTGCCTCTGGCAGGAAAACCCAACACGATGACTaGCCCTCGCAGGCCACAGTCAGCCCGGCCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: VSASGRKTQHDD*PSQATVSPAPG Trigger: TCCTGGGGCCGGGCTGACTGTGGCCTGCGAGGGGCAGTCATCGTGTTGGGTTTTCCTGCCAGAGGCAGAAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS CCA 72 bp | GGGCCCTCCACCTGCCCCATAACACCTTCTCCAGCATaGGCTCCTGCTGCTGCTGGGACAACCAAGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GPSTCPITPSPA*APAAAGTTKQE Trigger: CTCCTGCTTGGTTGTCCCAGCAGCAGCAGGAGCCCATGCTGGAGAAGGTGTTATGGGGCAGGTGGAGGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS CCA 72 bp | GCTGGTTGTTGTCCAGGGTGGGCAGATAGAGGGATGTaGACGGTGGGAGCCAGGGGAAGGGCAGAAGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: AGCCPGWADRGM*TVGARGRAEGD Trigger: GTCCCCTTCTGCCCTTCCCCTGGCTCCCACCGTCCACATCCCTCTATCTGCCCACCCTGGACAACAACCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS GCA 72 bp | CTGCCCCATAACACCTTCTCCAGCATGGGCTCCTGCTaGTGCTGGGACAACCAAGCAGGAGTGGACGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: LPHNTFSSMGSC*CWDNQAGVDGV Trigger: GACCCCGTCCACTCCTGCTTGGTTGTCCCAGCAGCAGCAGGAGCCCATGCTGGAGAAGGTGTTATGGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS GCA 72 bp | CACCTGCCCCATAACACCTTCTCCAGCATGGGCTCCTaGTGCTGCTGGGACAACCAAGCAGGAGTGGACGGG | + |
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Preference number: 6 (lower is better) Translates to: HLPHNTFSSMGS*CCWDNQAGVDG Trigger: CCCGTCCACTCCTGCTTGGTTGTCCCAGCAGCAGCAGGAGCCCATGCTGGAGAAGGTGTTATGGGGCAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS GCA 72 bp | CTTGGGGGATCATCTGAGTCAGCCGGGCCCTCCACCTaGCCCATAACACCTTCTCCAGCATGGGCTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LGGSSESAGPST*PITPSPAWAPA Trigger: AGCAGGAGCCCATGCTGGAGAAGGTGTTATGGGGCAGGTGGAGGGCCCGGCTGACTCAGATGATCCCCCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS CCA 72 bp | TCATCATCACACACACTCCAGAGGCTGAGAACATCTTaGAGGCCTGGGGCCTGCTGGCCAGACCCTGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SSSHTLQRLRTS*RPGACWPDPVL Trigger: CAGGACAGGGTCTGGCCAGCAGGCCCCAGGCCTCCAAGATGTTCTCAGCCTCTGGAGTGTGTGTGATGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423736.1 ENST00000609602.1 |
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| CDS CAA 72 bp | CTCATCATCACACACACTCCAGAGGCTGAGAACATCTaGGAGGCCTGGGGCCTGCTGGCCAGACCCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LIITHTPEAENI*EAWGLLARPCP Trigger: AGGACAGGGTCTGGCCAGCAGGCCCCAGGCCTCCAAGATGTTCTCAGCCTCTGGAGTGTGTGTGATGATGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423736.1 ENST00000609602.1 |
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| CDS GCA 72 bp | GAAGCCCAGGGCCCAGCATACAGGAAGCTCCATGAGTaGTCATCATCACACACACTCCAGAGGCTGAGAACA | + |
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Preference number: 6 (lower is better) Translates to: EAQGPAYRKLHE*SSSHTLQRLRT Trigger: TGTTCTCAGCCTCTGGAGTGTGTGTGATGATGAGCACTCATGGAGCTTCCTGTATGCTGGGCCCTGGGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423736.1 ENST00000609602.1 |
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| CDS CCA 72 bp | GCTGCCAGGCTGGGCTTCTCAGGAATGAGCTGGCACTaGAGGACGAGTGGATTAGACGCGAGGTCAATATTT | + |
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Preference number: 6 (lower is better) Translates to: AARLGFSGMSWH*RTSGLDARSIF Trigger: AAATATTGACCTCGCGTCTAATCCACTCGTCCTCCAGTGCCAGCTCATTCCTGAGAAGCCCAGCCTGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS CCA 72 bp | GGGCTTCTCAGGAATGAGCTGGCACTGGAGGACGAGTaGATTAGACGCGAGGTCAATATTTGTGGAATTGAA | + |
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Preference number: 6 (lower is better) Translates to: GLLRNELALEDE*IRREVNICGIE Trigger: TTCAATTCCACAAATATTGACCTCGCGTCTAATCCACTCGTCCTCCAGTGCCAGCTCATTCCTGAGAAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS CAA 90 bp | ATTGAATTGAATCTGTCACTTGGGGCGTGTATGTTCCAGGTAATTTaGTGGTTTCTGCCTCTGGCAGGAAAACCCAACACGATGACTGCC | + |
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Preference number: 6 (lower is better) Translates to: IELNLSLGACMFQVI*WFLPLAGKPNTMTA Trigger: GGCAGTCATCGTGTTGGGTTTTCCTGCCAGAGGCAGAAACCACAAAATTACCTGGAACATACACGCCCCAAGTGACAGATTCAATTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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| CDS TCA 72 bp | TTAGTTGTGTTTAGAAAGCAGCAAAGCTGCTATATTTaGGCAAAGGCTCAGCAGATTACCCTGGGCCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: LVVFRKQQSCYI*AKAQQITLGQE Trigger: CTCTTGGCCCAGGGTAATCTGCTGAGCCTTTGCTCAAATATAGCAGCTTTGCTGCTTTCTAAACACAACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000609602.1 |
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