Pregenerated sensors for LINC00885 (Homo sapiens)
Ensembl gene IDs: ENSG00000224652Ensembl transcript IDs: ENST00000457079.2, ENST00000654470.1, ENST00000659409.1, ENST00000662113.1, ENST00000662916.1, ENST00000669905.1, ENST00000670584.1
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCTCTGAGTGGGAAGGGACCCATTCCTTTCACTTCCCCGCTCCCTaGCTAGGTCAGCCCACACCTGGCTTGGGCCAGAGCTGCAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSEWEGTHSFHFPAP*LGQPTPGLGQSCSC Trigger: GCAACTGCAGCTCTGGCCCAAGCCAGGTGTGGGCTGACCTAGCCAGGGAGCGGGGAAGTGAAAGGAATGGGTCCCTTCCCACTCAGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662916.1 |
||
| CDS CCA 90 bp | CCCTGCCAGCGCTGGCTCGCCGGGATTCCATCTCCCCACCCTCTCTaGGTTCTCCACGCTCTGGGCTGTCATTGCAGCGTGGATCGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: PCQRWLAGIPSPHPL*VLHALGCHCSVDRN Trigger: ATTACGATCCACGCTGCAATGACAGCCCAGAGCGTGGAGAACCCAGAGAGGGTGGGGAGATGGAATCCCGGCGAGCCAGCGCTGGCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 90 bp | GCAAGTGACTCACTTCTTAGTCTTCTCTCTTGGAAAACCGGCGGCTaGACCAGCTGCTCCCCGTGGTCCCTGCCAGCGCTGGCTCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ASDSLLSLLSWKTGG*TSCSPWSLPALARR Trigger: CCGGCGAGCCAGCGCTGGCAGGGACCACGGGGAGCAGCTGGTCCAGCCGCCGGTTTTCCAAGAGAGAAGACTAAGAAGTGAGTCACTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669905.1 |
||
| CDS GCA 90 bp | TGGTTTCTTAGTCTTCTCTCTTGGAAAACCGGCGGCTGGACCAGCTaGTCCCCGTGGTCCCTGCCAGCGCTGGCTCGCCGGGATTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: WFLSLLSWKTGGWTS*SPWSLPALARRDSI Trigger: GATGGAATCCCGGCGAGCCAGCGCTGGCAGGGACCACGGGGAGCAGCTGGTCCAGCCGCCGGTTTTCCAAGAGAGAAGACTAAGAAACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670584.1 |
||
| CDS CCA 90 bp | GTCTGGTTCCCAGCTGAGCACTCAGGTACTGTGGGTGGGGTCTCTTaGCCTGGGGTCTGCCCGGCGCACCATGAATCATCAGCCAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: VWFPAEHSGTVGGVS*PGVCPAHHESSARQ Trigger: CTGTCTGGCTGATGATTCATGGTGCGCCGGGCAGACCCCAGGCCAAGAGACCCCACCCACAGTACCTGAGTGCTCAGCTGGGAACCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000457079.2 ENST00000654470.1 ENST00000659409.1 ENST00000662113.1 ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 90 bp | CTGCTCAGCTTTCTCTCACCAGAAGTGGGGGCTCCGCCCTCTGAGTaGGAAGGGACCCATTCCTTTCACTTCCCCGCTCCCTGGCTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLSFLSPEVGAPPSE*EGTHSFHFPAPWLG Trigger: ACCTAGCCAGGGAGCGGGGAAGTGAAAGGAATGGGTCCCTTCCCACTCAGAGGGCGGAGCCCCCACTTCTGGTGAGAGAAAGCTGAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000659409.1 ENST00000662916.1 |
||
| CDS TCA 90 bp | CATTCTGCTCAGCTTTCTCTCACCAGAAGTGGGGGCTCCGCCCTCTaGGTGGGAAGGGACCCATTCCTTTCACTTCCCCGCTCCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HSAQLSLTRSGGSAL*VGRDPFLSLPRSLA Trigger: AGCCAGGGAGCGGGGAAGTGAAAGGAATGGGTCCCTTCCCACTCAGAGGGCGGAGCCCCCACTTCTGGTGAGAGAAAGCTGAGCAGAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000659409.1 ENST00000662916.1 |
||
| CDS GCA 90 bp | GCTGAGCACTCAGGTACTGTGGGTGGGGTCTCTTGGCCTGGGGTCTaGCCGGCGCACCATGAATCATCAGCCAGACAGGGTCTTTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AEHSGTVGGVSWPGV*PAHHESSARQGLSE Trigger: TTCTGAAAGACCCTGTCTGGCTGATGATTCATGGTGCGCCGGGCAGACCCCAGGCCAAGAGACCCCACCCACAGTACCTGAGTGCTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000457079.2 ENST00000654470.1 ENST00000659409.1 ENST00000662113.1 ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS TCA 90 bp | TCTCCCTCGGCTCAGGCCCGCCCTGGGGAGCTGCGGAGGCTGTGTTaGGCTCAGCTCCTCATCTTAATTCTGCAAACCTGTTTTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPSAQARPGELRRLC*AQLLILILQTCFEV Trigger: GACCTCAAAACAGGTTTGCAGAATTAAGATGAGGAGCTGAGCTCAACACAGCCTCCGCAGCTCCCCAGGGCGGGCCTGAGCCGAGGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS TCA 90 bp | AAAGTTAGTGGAAGCCCTCAAGGCCTTGAACTAACTGCTCGCTGCTaGCCTGCCGGCCTCGTTGCCCTCCTTCTCTCTGTGGCTGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KVSGSPQGLELTARC*PAGLVALLLSVAVG Trigger: GCCCACAGCCACAGAGAGAAGGAGGGCAACGAGGCCGGCAGGTCAGCAGCGAGCAGTTAGTTCAAGGCCTTGAGGGCTTCCACTAACTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669905.1 |
||
| CDS GCA 90 bp | ACTGAATTCCATCTAGAAGGAGGACTCACTCCGGGAAAGAGGGAGTaGTCCTTAGGGAGGTGCTCCCTGCCTCCAGCCCAGGCCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TEFHLEGGLTPGKRE*SLGRCSLPPAQALL Trigger: GAGCAAGGCCTGGGCTGGAGGCAGGGAGCACCTCCCTAAGGAGCACTCCCTCTTTCCCGGAGTGAGTCCTCCTTCTAGATGGAATTCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000669905.1 |
||
| CDS CCA 90 bp | GTGGAGTCCAGCGAACTGCTGTCCTCAGGTGTTGGTGCTTTATCTTaGAGGCACTGGGAAGCCGTGGCCAGGGTTAAGGGGGTGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: VESSELLSSGVGALS*RHWEAVARVKGVRC Trigger: GCATCTCACCCCCTTAACCCTGGCCACGGCTTCCCAGTGCCTCCAAGATAAAGCACCAACACCTGAGGACAGCAGTTCGCTGGACTCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662113.1 |
||
| CDS CCA 90 bp | AGGCCGTGTGAAACCGGCAAGAGCATGGAGTTACTCACGGGGCAATaGAGCATGGCACGTTCAGCGTGGAGTCCAGCGAACTGCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RPCETGKSMELLTGQ*SMARSAWSPANCCP Trigger: AGGACAGCAGTTCGCTGGACTCCACGCTGAACGTGCCATGCTCCATTGCCCCGTGAGTAACTCCATGCTCTTGCCGGTTTCACACGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662113.1 |
||
| CDS CCA 90 bp | TCTCTGTGGCTGTGGGCAAGTGACTCACTTCTTAGTCTTCTCTCTTaGAAAACCGGCGGCTGGACCAGCTGCTCCCCGTGGTCCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLWLWASDSLLSLLS*KTGGWTSCSPWSLP Trigger: TGGCAGGGACCACGGGGAGCAGCTGGTCCAGCCGCCGGTTTTCCAAGAGAGAAGACTAAGAAGTGAGTCACTTGCCCACAGCCACAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669905.1 |
||
| CDS TCA 90 bp | GAAGCTGATGAGCCCAAGAGCTTCCTGAAAGCTGCCCAGGGCTCCTaGACAAAGGCTCCAGCTCTGAGAGGCCGTGTGAAACCGGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: EADEPKSFLKAAQGS*TKAPALRGRVKPAR Trigger: TCTTGCCGGTTTCACACGGCCTCTCAGAGCTGGAGCCTTTGTTCAGGAGCCCTGGGCAGCTTTCAGGAAGCTCTTGGGCTCATCAGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000662113.1 ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS GCA 90 bp | TCTTGGAGGCACTGGGAAGCCGTGGCCAGGGTTAAGGGGGTGAGATaGCAGGACTGTGCTTTAGTGCTCTCTGCAGTTACTGGCTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SWRHWEAVARVKGVR*QDCALVLSAVTGWV Trigger: TACCCAGCCAGTAACTGCAGAGAGCACTAAAGCACAGTCCTGGCATCTCACCCCCTTAACCCTGGCCACGGCTTCCCAGTGCCTCCAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000457079.2 ENST00000654470.1 ENST00000659409.1 ENST00000662113.1 ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 90 bp | ACAAAGGCTCCAGCTCTGAGAGGCCGTGTGAAACCGGCAAGAGCATaGAGTTACTCACGGGGCAATGGAGCATGGCACGTTCAGCGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TKAPALRGRVKPARA*SYSRGNGAWHVQRG Trigger: TCCACGCTGAACGTGCCATGCTCCATTGCCCCGTGAGTAACTCCATGCTCTTGCCGGTTTCACACGGCCTCTCAGAGCTGGAGCCTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000662113.1 ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 90 bp | AGCGAACTGCTGTCCTCAGGTGTTGGTGCTTTATCTTGGAGGCACTaGGAAGCCGTGGCCAGGGTTAAGGGGGTGAGATGCCAGGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SELLSSGVGALSWRH*EAVARVKGVRCQDC Trigger: ACAGTCCTGGCATCTCACCCCCTTAACCCTGGCCACGGCTTCCCAGTGCCTCCAAGATAAAGCACCAACACCTGAGGACAGCAGTTCGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662113.1 |
||
| CDS CCA 90 bp | GTGAAACCGGCAAGAGCATGGAGTTACTCACGGGGCAATGGAGCATaGCACGTTCAGCGTGGAGTCCAGCGAACTGCTGTCCTCAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VKPARAWSYSRGNGA*HVQRGVQRTAVLRC Trigger: ACACCTGAGGACAGCAGTTCGCTGGACTCCACGCTGAACGTGCCATGCTCCATTGCCCCGTGAGTAACTCCATGCTCTTGCCGGTTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662113.1 |
||
| CDS CCA 90 bp | TCGCCGGGATTCCATCTCCCCACCCTCTCTGGGTTCTCCACGCTCTaGGCTGTCATTGCAGCGTGGATCGTAATGCACGTAATGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SPGFHLPTLSGFSTL*AVIAAWIVMHVMQC Trigger: ACACTGCATTACGTGCATTACGATCCACGCTGCAATGACAGCCCAGAGCGTGGAGAACCCAGAGAGGGTGGGGAGATGGAATCCCGGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 90 bp | GCTGCTGACCTGCCGGCCTCGTTGCCCTCCTTCTCTCTGTGGCTGTaGGCAAGTGACTCACTTCTTAGTCTTCTCTCTTGGAAAACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: AADLPASLPSFSLWL*ASDSLLSLLSWKTG Trigger: GCCGGTTTTCCAAGAGAGAAGACTAAGAAGTGAGTCACTTGCCCACAGCCACAGAGAGAAGGAGGGCAACGAGGCCGGCAGGTCAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669905.1 |
||
| CDS CCA 90 bp | AACAAGCTGCTGTCCTCAGGTGTTGGTGCTTTATCTTGGAGGCACTaGGAAGCCGTGGCCAGGGTTAAGGGGGTGAGATGCCAGGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: NKLLSSGVGALSWRH*EAVARVKGVRCQDC Trigger: ACAGTCCTGGCATCTCACCCCCTTAACCCTGGCCACGGCTTCCCAGTGCCTCCAAGATAAAGCACCAACACCTGAGGACAGCAGCTTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000457079.2 ENST00000654470.1 ENST00000659409.1 ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 90 bp | CCCACCCTCTCTGGGTTCTCCACGCTCTGGGCTGTCATTGCAGCGTaGATCGTAATGCACGTAATGCAGTGTGACATGCATTCCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PTLSGFSTLWAVIAA*IVMHVMQCDMHSST Trigger: GGTGCTGGAATGCATGTCACACTGCATTACGTGCATTACGATCCACGCTGCAATGACAGCCCAGAGCGTGGAGAACCCAGAGAGGGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 90 bp | GACTCTCAAAACAAGCTGCTGTCCTCAGGTGTTGGTGCTTTATCTTaGAGGCACTGGGAAGCCGTGGCCAGGGTTAAGGGGGTGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: DSQNKLLSSGVGALS*RHWEAVARVKGVRC Trigger: GCATCTCACCCCCTTAACCCTGGCCACGGCTTCCCAGTGCCTCCAAGATAAAGCACCAACACCTGAGGACAGCAGCTTGTTTTGAGAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000457079.2 ENST00000654470.1 ENST00000659409.1 ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 90 bp | GTGAAACCGGCAAGAGCATGGAGTTACTCACGGGGCAATGGAGCATaGCACGTTCAGCGTGGAGTCCAGCGAACTGAAGGACAAATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: VKPARAWSYSRGNGA*HVQRGVQRTEGQIR Trigger: TCTAATTTGTCCTTCAGTTCGCTGGACTCCACGCTGAACGTGCCATGCTCCATTGCCCCGTGAGTAACTCCATGCTCTTGCCGGTTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 90 bp | AGGGAGGTGCTCCCTGCCTCCAGCCCAGGCCTTGCTCTTGGTGAGTaGTCATTTAGAGCAGGGGTTTCATGTCTTCATGTCTTTGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: REVLPASSPGLALGE*SFRAGVSCLHVFVF Trigger: AAATACAAAGACATGAAGACATGAAACCCCTGCTCTAAATGACCACTCACCAAGAGCAAGGCCTGGGCTGGAGGCAGGGAGCACCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000669905.1 |
||
| CDS TCA 90 bp | GCTGTGTTGAGCTCAGCTCCTCATCTTAATTCTGCAAACCTGTTTTaGGGTCTGGTCTGGTTCCCAGCTGAGCACTCAGGTACTGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: AVLSSAPHLNSANLF*GLVWFPAEHSGTVG Trigger: ACCCACAGTACCTGAGTGCTCAGCTGGGAACCAGACCAGACCTCAAAACAGGTTTGCAGAATTAAGATGAGGAGCTGAGCTCAACACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS GCA 90 bp | GGAGGTAGAGAAGAGCTTCCGTCTCCGGGGTCACGTGTTGTACTTTaGACATCCTCCGTGGTGAGGTTCTTTTCTAGATCTAGCCCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GGREELPSPGSRVVL*TSSVVRFFSRSSPN Trigger: ATTTGGGCTAGATCTAGAAAAGAACCTCACCACGGAGGATGTGCAAAGTACAACACGTGACCCCGGAGACGGAAGCTCTTCTCTACCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000662113.1 ENST00000662916.1 ENST00000670584.1 |
||
| CDS TCA 90 bp | CAGGGTCTTTCAGAAGCGGGACTGTCCATCCCTGTTCTCCAGGCATaGTCATGTCTGTTCATCAGAGATCATCTTTACGGAGGTAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QGLSEAGLSIPVLQA*SCLFIRDHLYGGRE Trigger: TTCTCTACCTCCGTAAAGATGATCTCTGATGAACAGACATGATCATGCCTGGAGAACAGGGATGGACAGTCCCGCTTCTGAAAGACCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000662113.1 ENST00000662916.1 ENST00000670584.1 |
||
| CDS TCA 90 bp | GTTGGCAGTATTTACACGACGGAAATAGCAAACACTACAAATCAGTaGAGTGTACAAATCAGTGTGGTCATTCATAGCACCAACCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VGSIYTTEIANTTNQ*SVQISVVIHSTNPA Trigger: GGCAGGGTTGGTGCTATGAATGACCACACTGATTTGTACACTTCACTGATTTGTAGTGTTTGCTATTTCCGTCGTGTAAATACTGCCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457079.2 ENST00000659409.1 |
||
| CDS CCA 90 bp | CTTCAAGAAGGCTTAAAACAAAGCTGCATTTTAAGGGCTTCTGGGTaGAGGAATCAGATTAGATCCATTCTGCTCAGCTTTCTCTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: LQEGLKQSCILRASG*RNQIRSILLSFLSP Trigger: TGGTGAGAGAAAGCTGAGCAGAATGGATCTAATCTGATTCCTCCACCCAGAAGCCCTTAAAATGCAGCTTTGTTTTAAGCCTTCTTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000662916.1 |
||
| CDS CCA 72 bp | GCTGGACCAGCTGCTCCCCGTGGTCCCTGCCAGCGCTaGCTCGCCGGGATTCCATCTCCCCACCCTCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AGPAAPRGPCQR*LAGIPSPHPLW Trigger: CCAGAGAGGGTGGGGAGATGGAATCCCGGCGAGCCAGCGCTGGCAGGGACCACGGGGAGCAGCTGGTCCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 72 bp | CGCTGGCTCGCCGGGATTCCATCTCCCCACCCTCTCTaGGTTCTCCACGCTCTGGGCTGTCATTGCAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RWLAGIPSPHPL*VLHALGCHCSV Trigger: CACGCTGCAATGACAGCCCAGAGCGTGGAGAACCCAGAGAGGGTGGGGAGATGGAATCCCGGCGAGCCAGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 72 bp | TGGGAAGGGACCCATTCCTTTCACTTCCCCGCTCCCTaGCTAGGTCAGCCCACACCTGGCTTGGGCCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: WEGTHSFHFPAP*LGQPTPGLGQS Trigger: GCTCTGGCCCAAGCCAGGTGTGGGCTGACCTAGCCAGGGAGCGGGGAAGTGAAAGGAATGGGTCCCTTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662916.1 |
||
| CDS CCA 72 bp | AGCAGGGAGGAAGGAGGGGCCACAGCGAGGAGTGTCTaGGACTCAGCTGAGCCTTTCTTGCCTCTGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SREEGGATARSV*DSAEPFLPLRQ Trigger: CTGCCTCAGAGGCAAGAAAGGCTCAGCTGAGTCCCAGACACTCCTCGCTGTGGCCCCTCCTTCCTCCCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000457079.2 ENST00000654470.1 ENST00000659409.1 ENST00000662113.1 ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 72 bp | TACAGTCTGCGGGTGGCCCCACGGGGCAATGGAGCATaGCACGTTCAGCGTGGAGTCCAGCGAACTGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: YSLRVAPRGNGA*HVQRGVQRTEG Trigger: TCCTTCAGTTCGCTGGACTCCACGCTGAACGTGCCATGCTCCATTGCCCCGTGGGGCCACCCGCAGACTGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654470.1 |
||
| CDS TCA 72 bp | GAACAATGGGGCTTCTACAGTGCCGGCCCAGAGGGATaGAGTAGTTCGTGGGGTAGGCGAAGGGAGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: EQWGFYSAGPEG*SSSWGRRREAG Trigger: CCCTGCCTCCCTTCGCCTACCCCACGAACTACTTCATCCCTCTGGGCCGGCACTGTAGAAGCCCCATTGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000457079.2 ENST00000654470.1 ENST00000662916.1 |
||
| CDS TCA 72 bp | GGAAGCCCTCAAGGCCTTGAACTAACTGCTCGCTGCTaGCCTGCCGGCCTCGTTGCCCTCCTTCTCTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSPQGLELTARC*PAGLVALLLSV Trigger: CACAGAGAGAAGGAGGGCAACGAGGCCGGCAGGTCAGCAGCGAGCAGTTAGTTCAAGGCCTTGAGGGCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669905.1 |
||
| CDS CCA 72 bp | TTTCTCTCACCAGAAGTGGGGGCTCCGCCCTCTGAGTaGGAAGGGACCCATTCCTTTCACTTCCCCGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FLSPEVGAPPSE*EGTHSFHFPAP Trigger: GGGAGCGGGGAAGTGAAAGGAATGGGTCCCTTCCCACTCAGAGGGCGGAGCCCCCACTTCTGGTGAGAGAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000659409.1 ENST00000662916.1 |
||
| CDS CCA 72 bp | TGGTTTCTTAGTCTTCTCTCTTGGAAAACCGGCGGCTaGACCAGCTGCTCCCCGTGGTCCCTGCCAGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WFLSLLSWKTGG*TSCSPWSLPAL Trigger: CAGCGCTGGCAGGGACCACGGGGAGCAGCTGGTCCAGCCGCCGGTTTTCCAAGAGAGAAGACTAAGAAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670584.1 |
||
| CDS TCA 72 bp | GGCTGGTCTGTTTTGAGGTCTGGTCTGGTTCCCAGCTaGGCACTCAGGTACTGTGGGTGGGGTCTCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GWSVLRSGLVPS*ALRYCGWGLLA Trigger: GGCCAAGAGACCCCACCCACAGTACCTGAGTGCTCAGCTGGGAACCAGACCAGACCTCAAAACAGACCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000659409.1 ENST00000662113.1 |
||
| CDS GCA 72 bp | CGTGGAGTCCAGCGAACTGCTGTCCTCAGGTGTTGGTaGTTTATCTTGGAGGCACTGGGAAGCCGTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RGVQRTAVLRCW*FILEALGSRGQ Trigger: CTGGCCACGGCTTCCCAGTGCCTCCAAGATAAAGCACCAACACCTGAGGACAGCAGTTCGCTGGACTCCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662113.1 |
||
| CDS CAA 90 bp | CAGGTGGTGAGCGGGCGGGGTCTTGCTCCTTGCGGGGTGCGAAAGTaGGCAGGGTTGGGTGGTAACCTTGGGAACTTCTTAGTCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QVVSGRGLAPCGVRK*AGLGGNLGNFLVFS Trigger: AGAGAAGACTAAGAAGTTCCCAAGGTTACCACCCAACCCTGCCAACTTTCGCACCCCGCAAGGAGCAAGACCCCGCCCGCTCACCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662916.1 |
||
| CDS TCA 72 bp | TGGGAACCTGTTTTGAGGTCTGGTCTGGTTCCCAGCTaGGCACTCAGGTACTGTGGGTGGGGTCTCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WEPVLRSGLVPS*ALRYCGWGLLA Trigger: GGCCAAGAGACCCCACCCACAGTACCTGAGTGCTCAGCTGGGAACCAGACCAGACCTCAAAACAGGTTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000457079.2 ENST00000654470.1 |
||
| CDS TCA 72 bp | GAGCCCAAGAGCTTCCTGAAAGCTGCCCAGGGCTCCTaGACAAAGGCTCCAGCTCTGAGAGGCCGTGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: EPKSFLKAAQGS*TKAPALRGRVK Trigger: TTTCACACGGCCTCTCAGAGCTGGAGCCTTTGTTCAGGAGCCCTGGGCAGCTTTCAGGAAGCTCTTGGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000662113.1 ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 72 bp | CTGTCCTCAGGTGTTGGTGCTTTATCTTGGAGGCACTaGGAAGCCGTGGCCAGGGTTAAGGGGGTGAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: LSSGVGALSWRH*EAVARVKGVRC Trigger: GCATCTCACCCCCTTAACCCTGGCCACGGCTTCCCAGTGCCTCCAAGATAAAGCACCAACACCTGAGGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000457079.2 ENST00000654470.1 ENST00000659409.1 ENST00000662113.1 ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 72 bp | GAAACCGGCAAGAGCATGGAGTTACTCACGGGGCAATaGAGCATGGCACGTTCAGCGTGGAGTCCAGCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: ETGKSMELLTGQ*SMARSAWSPAN Trigger: GTTCGCTGGACTCCACGCTGAACGTGCCATGCTCCATTGCCCCGTGAGTAACTCCATGCTCTTGCCGGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000662113.1 ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 72 bp | CCAGCTCTGAGAGGCCGTGTGAAACCGGCAAGAGCATaGAGTTACTCACGGGGCAATGGAGCATGGCACGTT | + |
|
Preference number: 6 (lower is better) Translates to: PALRGRVKPARA*SYSRGNGAWHV Trigger: AACGTGCCATGCTCCATTGCCCCGTGAGTAACTCCATGCTCTTGCCGGTTTCACACGGCCTCTCAGAGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000662113.1 ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 72 bp | TTACTCACGGGGCAATGGAGCATGGCACGTTCAGCGTaGAGTCCAGCGAACTGCTGTCCTCAGGTGTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLTGQWSMARSA*SPANCCPQVLV Trigger: CACCAACACCTGAGGACAGCAGTTCGCTGGACTCCACGCTGAACGTGCCATGCTCCATTGCCCCGTGAGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662113.1 |
||
| CDS CCA 72 bp | GCAAGAGCATGGAGTTACTCACGGGGCAATGGAGCATaGCACGTTCAGCGTGGAGTCCAGCGAACTGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ARAWSYSRGNGA*HVQRGVQRTAV Trigger: GACAGCAGTTCGCTGGACTCCACGCTGAACGTGCCATGCTCCATTGCCCCGTGAGTAACTCCATGCTCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662113.1 |
||
| CDS CCA 72 bp | CTGTGGGCAAGTGACTCACTTCTTAGTCTTCTCTCTTaGAAAACCGGCGGCTGGACCAGCTGCTCCCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LWASDSLLSLLS*KTGGWTSCSPW Trigger: CCACGGGGAGCAGCTGGTCCAGCCGCCGGTTTTCCAAGAGAGAAGACTAAGAAGTGAGTCACTTGCCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669905.1 |
||
| CDS CAA 72 bp | TTTCTTGCCTCTGAGGCAGGTGGCCTGGGGAAGTCCTaGATCTTGAACCAGCCGGTTACAGTCTGCGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FLASEAGGLGKS*ILNQPVTVCGW Trigger: CCACCCGCAGACTGTAACCGGCTGGTTCAAGATCAAGGACTTCCCCAGGCCACCTGCCTCAGAGGCAAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000457079.2 ENST00000654470.1 ENST00000659409.1 ENST00000662113.1 ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS TCA 72 bp | GGGAGAGGGAAAGAGGAGATAATTGGGAGGTCGATGTaGACAATGGGGCTTCTACAGTGCCGGCCCAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRGKEEIIGRSM*TMGLLQCRPRG Trigger: CCCTCTGGGCCGGCACTGTAGAAGCCCCATTGTTCACATCGACCTCCCAATTATCTCCTCTTTCCCTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457079.2 ENST00000654470.1 ENST00000662916.1 |
||
| CDS TCA 72 bp | TGCAAACCTGTTTTGAGGTCTGGTCTGGTTCCCAGCTaGGCACTCAGGTACTGTGGGTGGGGTCTCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CKPVLRSGLVPS*ALRYCGWGLLA Trigger: GGCCAAGAGACCCCACCCACAGTACCTGAGTGCTCAGCTGGGAACCAGACCAGACCTCAAAACAGGTTTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS GCA 72 bp | CACTGGGAAGCCGTGGCCAGGGTTAAGGGGGTGAGATaGCAGGACTGTGCTTTAGTGCTCTCTGCAGTTACT | + |
|
Preference number: 6 (lower is better) Translates to: HWEAVARVKGVR*QDCALVLSAVT Trigger: AGTAACTGCAGAGAGCACTAAAGCACAGTCCTGGCATCTCACCCCCTTAACCCTGGCCACGGCTTCCCAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000457079.2 ENST00000654470.1 ENST00000659409.1 ENST00000662113.1 ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 72 bp | GCAAGAGCATGGAGTTACTCACGGGGCAATGGAGCATaGCACGTTCAGCGTGGAGTCCAGCGAACTGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ARAWSYSRGNGA*HVQRGVQRTEG Trigger: TCCTTCAGTTCGCTGGACTCCACGCTGAACGTGCCATGCTCCATTGCCCCGTGAGTAACTCCATGCTCTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 72 bp | CTGCCGGCCTCGTTGCCCTCCTTCTCTCTGTGGCTGTaGGCAAGTGACTCACTTCTTAGTCTTCTCTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPASLPSFSLWL*ASDSLLSLLSW Trigger: CCAAGAGAGAAGACTAAGAAGTGAGTCACTTGCCCACAGCCACAGAGAGAAGGAGGGCAACGAGGCCGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669905.1 |
||
| CDS CAA 90 bp | AGCGGGCGGGGTCTTGCTCCTTGCGGGGTGCGAAAGTTGGCAGGGTaGGGTGGTAACCTTGGGAACTTCTTAGTCTTCTCTCTTGGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SGRGLAPCGVRKLAG*GGNLGNFLVFSLGK Trigger: TTTTCCAAGAGAGAAGACTAAGAAGTTCCCAAGGTTACCACCCAACCCTGCCAACTTTCGCACCCCGCAAGGAGCAAGACCCCGCCCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662916.1 |
||
| CDS TCA 72 bp | CCCCAACAGGGACTGTGGCTCAAGAGGAACCCGGACTaGATTCCATCTAGAAGGAGGACTCACTCCGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PQQGLWLKRNPD*IPSRRRTHSGK Trigger: TTTCCCGGAGTGAGTCCTCCTTCTAGATGGAATTCAGTCCGGGTTCCTCTTGAGCCACAGTCCCTGTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000669905.1 |
||
| CDS TCA 72 bp | CATTGCAGCGTGGATCGTAATGCACGTAATGCAGTGTaGCATGCATTCCAGCACCCTGATGGCCATGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: HCSVDRNARNAV*HAFQHPDGHGL Trigger: GAGCCCATGGCCATCAGGGTGCTGGAATGCATGTCACACTGCATTACGTGCATTACGATCCACGCTGCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CAA 72 bp | GGTCTTGCTCCTTGCGGGGTGCGAAAGTTGGCAGGGTaGGGTGGTAACCTTGGGAACTTCTTAGTCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GLAPCGVRKLAG*GGNLGNFLVFS Trigger: AGAGAAGACTAAGAAGTTCCCAAGGTTACCACCCAACCCTGCCAACTTTCGCACCCCGCAAGGAGCAAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662916.1 |
||
| CDS CCA 72 bp | TCTGGGTTCTCCACGCTCTGGGCTGTCATTGCAGCGTaGATCGTAATGCACGTAATGCAGTGTGACATGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SGFSTLWAVIAA*IVMHVMQCDMH Trigger: ATGCATGTCACACTGCATTACGTGCATTACGATCCACGCTGCAATGACAGCCCAGAGCGTGGAGAACCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS GCA 72 bp | GAAGAGCTTCCGTCTCCGGGGTCACGTGTTGTACTTTaGACATCCTCCGTGGTGAGGTTCTTTTCTAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: EELPSPGSRVVL*TSSVVRFFSRS Trigger: AGATCTAGAAAAGAACCTCACCACGGAGGATGTGCAAAGTACAACACGTGACCCCGGAGACGGAAGCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000662113.1 ENST00000662916.1 ENST00000670584.1 |
||
| CDS CCA 72 bp | CTCCTCATCTTAATTCTGCAAACCTGTTTTGAGGTCTaGTCTGGTTCCCAGCTGAGCACTCAGGTACTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLILILQTCFEV*SGSQLSTQVLW Trigger: CCACAGTACCTGAGTGCTCAGCTGGGAACCAGACCAGACCTCAAAACAGGTTTGCAGAATTAAGATGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS TCA 72 bp | CGGGGTCACGTGTTGTACTTTGCACATCCTCCGTGGTaGGGTTCTTTTCTAGATCTAGCCCAAATCTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RGHVLYFAHPPW*GSFLDLAQIFK Trigger: CTTGAAGATTTGGGCTAGATCTAGAAAAGAACCTCACCACGGAGGATGTGCAAAGTACAACACGTGACCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000662113.1 ENST00000662916.1 ENST00000670584.1 |
||
| CDS TCA 72 bp | TCAGAAGCGGGACTGTCCATCCCTGTTCTCCAGGCATaGTCATGTCTGTTCATCAGAGATCATCTTTACGGA | + |
|
Preference number: 6 (lower is better) Translates to: SEAGLSIPVLQA*SCLFIRDHLYG Trigger: TCCGTAAAGATGATCTCTGATGAACAGACATGATCATGCCTGGAGAACAGGGATGGACAGTCCCGCTTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000662113.1 ENST00000662916.1 ENST00000669905.1 ENST00000670584.1 |
||
| CDS CCA 72 bp | GGCTTAAAACAAAGCTGCATTTTAAGGGCTTCTGGGTaGAGGAATCAGATTAGATCCATTCTGCTCAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GLKQSCILRASG*RNQIRSILLSF Trigger: AAAGCTGAGCAGAATGGATCTAATCTGATTCCTCCACCCAGAAGCCCTTAAAATGCAGCTTTGTTTTAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000662916.1 |
||
| CDS TCA 72 bp | ATTTACACGACGGAAATAGCAAACACTACAAATCAGTaGAGTGTACAAATCAGTGTGGTCATTCATAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: IYTTEIANTTNQ*SVQISVVIHST Trigger: GGTGCTATGAATGACCACACTGATTTGTACACTTCACTGATTTGTAGTGTTTGCTATTTCCGTCGTGTAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457079.2 ENST00000659409.1 |
||
| CDS CCA 72 bp | GTTAGTAAACCATTAGCAACTGAAGATTGTCCATGTTaGCAGTATTTACACGACGGAAATAGCAAACACTAC | + |
|
Preference number: 6 (lower is better) Translates to: VSKPLATEDCPC*QYLHDGNSKHY Trigger: GTAGTGTTTGCTATTTCCGTCGTGTAAATACTGCCAACATGGACAATCTTCAGTTGCTAATGGTTTACTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457079.2 ENST00000659409.1 |
||
| CDS CAA 72 bp | TTAGAGCAGGGGTTTCATGTCTTCATGTCTTTGTATTaGCACAGTAGTCAATTTATTTACTGCTGCCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: LEQGFHVFMSLY*HSSQFIYCCHF Trigger: AAAGTGGCAGCAGTAAATAAATTGACTACTGTGCAAATACAAAGACATGAAGACATGAAACCCCTGCTCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000457079.2 ENST00000659409.1 ENST00000669905.1 |
||