Pregenerated sensors for LINC00881 (Homo sapiens)
Ensembl gene IDs: ENSG00000241135Ensembl transcript IDs: ENST00000467995.5, ENST00000471719.2, ENST00000474477.5, ENST00000654705.1, ENST00000654835.1, ENST00000660852.1, ENST00000663887.1, ENST00000665438.1, ENST00000665841.1, ENST00000666301.1, ENST00000670208.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCATGCTATGAGCTTGCCCTCGCCCTGCTTTGCCTGACAGTCCAGTaGTGGGCGCCTGACCAAGGCCAGCCACTCATTAGTCTTACCTGG | + |
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Preference number: 5 (lower is better) Translates to: ACYELALALLCLTVQ*WAPDQGQPLISLTW Trigger: CCAGGTAAGACTAATGAGTGGCTGGCCTTGGTCAGGCGCCCACCACTGGACTGTCAGGCAAAGCAGGGCGAGGGCAAGCTCATAGCATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654835.1 |
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| CDS CCA 90 bp | TGCTATGAGCTTGCCCTCGCCCTGCTTTGCCTGACAGTCCAGTGGTaGGCGCCTGACCAAGGCCAGCCACTCATTAGTCTTACCTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: CYELALALLCLTVQW*APDQGQPLISLTWD Trigger: ATCCCAGGTAAGACTAATGAGTGGCTGGCCTTGGTCAGGCGCCCACCACTGGACTGTCAGGCAAAGCAGGGCGAGGGCAAGCTCATAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654835.1 |
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| CDS TCA 90 bp | ATGCTGAACCAGGGAGCAGAGGTTGAGGCAGGTTCACATAGTCACTaGCTCTGCTCCAAAGCTTCCTGCGATGTGGGTAAGCCGGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: MLNQGAEVEAGSHSH*LCSKASCDVGKPVG Trigger: ACCCACCGGCTTACCCACATCGCAGGAAGCTTTGGAGCAGAGTCAGTGACTATGTGAACCTGCCTCAACCTCTGCTCCCTGGTTCAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474477.5 |
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| CDS CCA 90 bp | CAGGTTCACATAGTCACTGACTCTGCTCCAAAGCTTCCTGCGATGTaGGTAAGCCGGTGGGTCATTTGGCTTCCTGGAAGCTGCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: QVHIVTDSAPKLPAM*VSRWVIWLPGSCTR Trigger: CCTGGTGCAGCTTCCAGGAAGCCAAATGACCCACCGGCTTACCCACATCGCAGGAAGCTTTGGAGCAGAGTCAGTGACTATGTGAACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474477.5 |
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| CDS TCA 90 bp | GTGACCACGTGGTCAACAGGTGTTCAGTGCACGGGGAGGTACAGGTaGAGACACTGGAAGGGTGGAGAAGAGGAGAAGGCTATTTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: VTTWSTGVQCTGRYR*RHWKGGEEEKAISS Trigger: ACTGGAAATAGCCTTCTCCTCTTCTCCACCCTTCCAGTGTCTTCACCTGTACCTCCCCGTGCACTGAACACCTGTTGACCACGTGGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654835.1 |
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| CDS GCA 90 bp | GCTGAAGGAGAGATTAACAGAAGCCATTTCCTCCTTTCCCTGTCATaGCAGATCCTCTGTCTGTGTGAGTCTCCCCAAGCGCTGCACACG | + |
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Preference number: 5 (lower is better) Translates to: AEGEINRSHFLLSLS*QILCLCESPQALHT Trigger: CGTGTGCAGCGCTTGGGGAGACTCACACAGACAGAGGATCTGGCATGACAGGGAAAGGAGGAAATGGCTTCTGTTAATCTCTCCTTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000467995.5 ENST00000471719.2 ENST00000474477.5 ENST00000654705.1 ENST00000654835.1 ENST00000660852.1 ENST00000663887.1 ENST00000665438.1 ENST00000665841.1 ENST00000666301.1 ENST00000670208.1 |
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| CDS TCA 90 bp | GAGGCCAGAAACCTGAGATCAAATTGTCTGCAGGGTTGGTTTCTTTaGAGGGCTCTCTCTGTGGCTTGCAGGTGGCTGTCTTCTCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: EARNLRSNCLQGWFL*RALSVACRWLSSPS Trigger: AGAGGGAGAAGACAGCCACCTGCAAGCCACAGAGAGAGCCCTTCAAAGAAACCAACCCTGCAGACAATTTGATCTCAGGTTTCTGGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000471719.2 ENST00000654705.1 ENST00000660852.1 ENST00000663887.1 ENST00000665841.1 ENST00000670208.1 |
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| CDS GCA 90 bp | TTAAAGTTGGAGGGAGGCCTTGCTGTGGATGTCTGTGGGGCTGTCTaGCTACCACTCTTCTCTCATATGAAAGTATCCTCTCCCCACAGC | + |
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Preference number: 5 (lower is better) Translates to: LKLEGGLAVDVCGAV*LPLFSHMKVSSPHS Trigger: GCTGTGGGGAGAGGATACTTTCATATGAGAGAAGAGTGGTAGGCAGACAGCCCCACAGACATCCACAGCAAGGCCTCCCTCCAACTTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654835.1 |
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| CDS CCA 90 bp | TTAAATTCAGGAGGTTCCTGTATGTGGGTGTGGCAGGGAGGGATTTaGGCAGCCGTGTTTCCTGCAATGTGGACGAAATCAGTATGCCAT | + |
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Preference number: 5 (lower is better) Translates to: LNSGGSCMWVWQGGI*AAVFPAMWTKSVCH Trigger: ATGGCATACTGATTTCGTCCACATTGCAGGAAACACGGCTGCCCAAATCCCTCCCTGCCACACCCACATACAGGAACCTCCTGAATTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654835.1 |
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| CDS GCA 90 bp | TATCACTCACAGCAGATGAATCCCATATGCTTGCTGGCTTGTTTCTaGCCCAGCATTTTTCAAAGTGTTGTCCAGGACCACCTGCACCAG | + |
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Preference number: 5 (lower is better) Translates to: YHSQQMNPICLLACF*PSIFQSVVQDHLHQ Trigger: CTGGTGCAGGTGGTCCTGGACAACACTTTGAAAAATGCTGGGGCAGAAACAAGCCAGCAAGCATATGGGATTCATCTGCTGTGAGTGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000471719.2 ENST00000654705.1 |
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| CDS GCA 90 bp | GAACCCGAGAATCCTCCCGGATTTCTATTTCCTTTCCCCTTTCCCTaGCTACTGAGGCAGAACCTTGTACCTGGCAGTATATCAGATATC | + |
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Preference number: 5 (lower is better) Translates to: EPENPPGFLFPFPFP*LLRQNLVPGSISDI Trigger: GATATCTGATATACTGCCAGGTACAAGGTTCTGCCTCAGTAGGCAGGGAAAGGGGAAAGGAAATAGAAATCCGGGAGGATTCTCGGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS CCA 90 bp | GATCAAATTGTCTGCAGGGTTGGTTTCTTTGAAGGGCTCTCTCTGTaGCTTGCAGGTGGCTGTCTTCTCCCTCTGTGTTCATATGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: DQIVCRVGFFEGLSL*LAGGCLLPLCSYGL Trigger: AAGACCATATGAACACAGAGGGAGAAGACAGCCACCTGCAAGCCACAGAGAGAGCCCTTCAAAGAAACCAACCCTGCAGACAATTTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000471719.2 ENST00000654705.1 ENST00000660852.1 ENST00000663887.1 ENST00000665841.1 ENST00000670208.1 |
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| CDS CCA 90 bp | TTTAGTGAAAGCCTAAAGAGGTTAAATTCAGGAGGTTCCTGTATGTaGGTGTGGCAGGGAGGGATTTGGGCAGCCGTGTTTCCTGCAATG | + |
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Preference number: 5 (lower is better) Translates to: FSESLKRLNSGGSCM*VWQGGIWAAVFPAM Trigger: CATTGCAGGAAACACGGCTGCCCAAATCCCTCCCTGCCACACCCACATACAGGAACCTCCTGAATTTAACCTCTTTAGGCTTTCACTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654835.1 |
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| CDS GCA 90 bp | TATCACTCACAGCAGATGAATCCCATATGCTTGCTGGCTTGTTTCTaGCCCAGCATTTTTCAAAGTGTTGTCCAGGACCACCTGCAATCG | + |
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Preference number: 5 (lower is better) Translates to: YHSQQMNPICLLACF*PSIFQSVVQDHLQS Trigger: CGATTGCAGGTGGTCCTGGACAACACTTTGAAAAATGCTGGGGCAGAAACAAGCCAGCAAGCATATGGGATTCATCTGCTGTGAGTGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000660852.1 ENST00000665841.1 |
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| CDS GCA 90 bp | TTTCAAAGTGTTGTCCAGGACCACCTGCAATCGAATCACTTGGGCTaGACCAGGACTGAACAGAACAGGCAGGAGGTATTTTCTTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: FQSVVQDHLQSNHLG*TRTEQNRQEVFSSE Trigger: TTCAGAAGAAAATACCTCCTGCCTGTTCTGTTCAGTCCTGGTGCAGCCCAAGTGATTCGATTGCAGGTGGTCCTGGACAACACTTTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660852.1 |
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| CDS TCA 90 bp | TTAATTACTTCTTCAAAGGCCCTGTTTCCAAATACAGTCACATTCTaGGGTACTAGGCGTCCATATATGCATGGCGGCGGGGCACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: LITSSKALFPNTVTF*GTRRPYMHGGGAQE Trigger: TTCCTGTGCCCCGCCGCCATGCATATATGGACGCCTAGTACCTCAGAATGTGACTGTATTTGGAAACAGGGCCTTTGAAGAAGTAATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000471719.2 ENST00000654705.1 ENST00000660852.1 ENST00000665841.1 |
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| CDS GCA 90 bp | TGTGGACGAAATCAGTATGCCATGAGAGAGAATGAAATAGGCACCTaGACCAGGACTGAACAGAACAGGCAGGAGGTATTTTCTTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: CGRNQYAMRENEIGT*TRTEQNRQEVFSSE Trigger: TTCAGAAGAAAATACCTCCTGCCTGTTCTGTTCAGTCCTGGTGCAGGTGCCTATTTCATTCTCTCTCATGGCATACTGATTTCGTCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654835.1 |
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| CDS CCA 90 bp | TACCTGGCAGTATATCAGATATCCACCCAGAGTAGTGTGTATGAGTaGATGAATGAACTATGGTGCTACAGAACACCATGGCTCCAACTT | + |
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Preference number: 5 (lower is better) Translates to: YLAVYQISTQSSVYE*MNELWCYRTPWLQL Trigger: AAGTTGGAGCCATGGTGTTCTGTAGCACCATAGTTCATTCATCCACTCATACACACTACTCTGGGTGGATATCTGATATACTGCCAGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS CCA 90 bp | ACCTTCCCTCTTATCTGGGTTCGGAACTGGCAAGCAACCTCCATGTaGGCACTTCATAAATATTCATTGATGATGAAAATGTCGACAGTG | + |
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Preference number: 5 (lower is better) Translates to: TFPLIWVRNWQATSM*ALHKYSLMMKMSTV Trigger: CACTGTCGACATTTTCATCATCAATGAATATTTATGAAGTGCCCACATGGAGGTTGCTTGCCAGTTCCGAACCCAGATAAGAGGGAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665438.1 |
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| CDS TCA 90 bp | TGGTTTTCTTTCCATTTCTCCATCTGTTCCTCAGGATCTCTTATTTaGTCCTTAGGATCTGGTATCTGTCAGGTTTGGGTTTCATGCTTT | + |
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Preference number: 5 (lower is better) Translates to: WFSFHFSICSSGSLI*SLGSGICQVWVSCF Trigger: AAAGCATGAAACCCAAACCTGACAGATACCAGATCCTAAGGATCAAATAAGAGATCCTGAGGAACAGATGGAGAAATGGAAAGAAAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS TCA 90 bp | CATTTCAAGAACCCTTTTGAAATGCTAGTGATTGAAGAAGGATCTTaGCTATCCTTTGCAAATCTCGAACAAGAAAGGCCCAGTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: HFKNPFEMLVIEEGS*LSFANLEQERPSSA Trigger: AGCTGAACTGGGCCTTTCTTGTTCGAGATTTGCAAAGGATAGTCAAGATCCTTCTTCAATCACTAGCATTTCAAAAGGGTTCTTGAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665438.1 |
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| CDS GCA 72 bp | GGAACTGCATGCTATGAGCTTGCCCTCGCCCTGCTTTaGCTGACAGTCCAGTGGTGGGCGCCTGACCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: GTACYELALALL*LTVQWWAPDQG Trigger: GCCTTGGTCAGGCGCCCACCACTGGACTGTCAGGCAAAGCAGGGCGAGGGCAAGCTCATAGCATGCAGTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654835.1 |
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| CDS CCA 72 bp | GAGCTTGCCCTCGCCCTGCTTTGCCTGACAGTCCAGTaGTGGGCGCCTGACCAAGGCCAGCCACTCATTAGT | + |
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Preference number: 6 (lower is better) Translates to: ELALALLCLTVQ*WAPDQGQPLIS Trigger: ACTAATGAGTGGCTGGCCTTGGTCAGGCGCCCACCACTGGACTGTCAGGCAAAGCAGGGCGAGGGCAAGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654835.1 |
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| CDS CCA 72 bp | CTTGCCCTCGCCCTGCTTTGCCTGACAGTCCAGTGGTaGGCGCCTGACCAAGGCCAGCCACTCATTAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LALALLCLTVQW*APDQGQPLISL Trigger: AAGACTAATGAGTGGCTGGCCTTGGTCAGGCGCCCACCACTGGACTGTCAGGCAAAGCAGGGCGAGGGCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654835.1 |
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| CDS CCA 72 bp | GGAGGTTCCTGTATGTGGGTGTGGCAGGGAGGGATTTaGGCAGCCGTGTTTCCTGCAATGTGGACGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: GGSCMWVWQGGI*AAVFPAMWTKS Trigger: TGATTTCGTCCACATTGCAGGAAACACGGCTGCCCAAATCCCTCCCTGCCACACCCACATACAGGAACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654835.1 |
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| CDS CCA 72 bp | TCTCTGCAGCCACCTACCTTGAGTCACCGTGAGAACTaGAAAGGGAAACAGGAAGAGTGCATGGGAAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: SLQPPTLSHREN*KGKQEECMGRA Trigger: CGCCCTTCCCATGCACTCTTCCTGTTTCCCTTTCCAGTTCTCACGGTGACTCAAGGTAGGTGGCTGCAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS CAA 72 bp | TCCCCAAGCGCTGCACACGGGAAAGCACCTTCCCTCTaGTTCCTCATGACTTCTGTCTGGAAACGAGTACCG | + |
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Preference number: 6 (lower is better) Translates to: SPSAAHGKAPSL*FLMTSVWKRVP Trigger: CGGTACTCGTTTCCAGACAGAAGTCATGAGGAACAAGAGGGAAGGTGCTTTCCCGTGTGCAGCGCTTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 11 transcripts: ENST00000467995.5 ENST00000471719.2 ENST00000474477.5 ENST00000654705.1 ENST00000654835.1 ENST00000660852.1 ENST00000663887.1 ENST00000665438.1 ENST00000665841.1 ENST00000666301.1 ENST00000670208.1 |
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| CDS CAA 72 bp | AGGAGGTTCCTGTATGTGGGTGTGGCAGGGAGGGATTaGGGCAGCCGTGTTTCCTGCAATGTGGACGAAATC | + |
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Preference number: 6 (lower is better) Translates to: RRFLYVGVAGRD*GSRVSCNVDEI Trigger: GATTTCGTCCACATTGCAGGAAACACGGCTGCCCAAATCCCTCCCTGCCACACCCACATACAGGAACCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654835.1 |
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| CDS TCA 72 bp | CAGGGAGCAGAGGTTGAGGCAGGTTCACATAGTCACTaGCTCTGCTCCAAAGCTTCCTGCGATGTGGGTAAG | + |
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Preference number: 6 (lower is better) Translates to: QGAEVEAGSHSH*LCSKASCDVGK Trigger: CTTACCCACATCGCAGGAAGCTTTGGAGCAGAGTCAGTGACTATGTGAACCTGCCTCAACCTCTGCTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474477.5 |
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| CDS CCA 72 bp | ATAGTCACTGACTCTGCTCCAAAGCTTCCTGCGATGTaGGTAAGCCGGTGGGTCATTTGGCTTCCTGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: IVTDSAPKLPAM*VSRWVIWLPGS Trigger: GCTTCCAGGAAGCCAAATGACCCACCGGCTTACCCACATCGCAGGAAGCTTTGGAGCAGAGTCAGTGACTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474477.5 |
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| CDS CCA 72 bp | AAAGTGTTGTCCAGGACCACCTGCAATCGAATCACTTaGGCTGCACCAGGACTGAACAGAACAGGCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: KVLSRTTCNRIT*AAPGLNRTGRR Trigger: CCTCCTGCCTGTTCTGTTCAGTCCTGGTGCAGCCCAAGTGATTCGATTGCAGGTGGTCCTGGACAACACTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660852.1 |
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| CDS CAA 72 bp | ATTCTGCCTGCTCTTCTGGGCCATCCCAGCCCTGCCTaGGCTTCAGTGACCATCTTTAAGTTGACTGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: ILPALLGHPSPA*ASVTIFKLTVP Trigger: GGGAACAGTCAACTTAAAGATGGTCACTGAAGCCAAGGCAGGGCTGGGATGGCCCAGAAGAGCAGGCAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS CAA 90 bp | GGAGGCCAGAAACCTGAGATCAAATTGTCTGCAGGGTTGGTTTCTTaGAAGGGCTCTCTCTGTGGCTTGCAGGTGGCTGTCTTCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: GGQKPEIKLSAGLVS*KGSLCGLQVAVFSL Trigger: GAGGGAGAAGACAGCCACCTGCAAGCCACAGAGAGAGCCCTTCAAAGAAACCAACCCTGCAGACAATTTGATCTCAGGTTTCTGGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000471719.2 ENST00000654705.1 ENST00000660852.1 ENST00000663887.1 ENST00000665841.1 ENST00000670208.1 |
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| CDS CAA 90 bp | AGTCTTTTCATTCTGCCTGCTCTTCTGGGCCATCCCAGCCCTGCCTaGGCTTCAGTGACCATCTTTAAGTTGACTGTTCCCCAGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: SLFILPALLGHPSPA*ASVTIFKLTVPQWA Trigger: TGCCCACTGGGGAACAGTCAACTTAAAGATGGTCACTGAAGCCAAGGCAGGGCTGGGATGGCCCAGAAGAGCAGGCAGAATGAAAAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS GCA 72 bp | GAGGGAGGCCTTGCTGTGGATGTCTGTGGGGCTGTCTaGCTACCACTCTTCTCTCATATGAAAGTATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: EGGLAVDVCGAV*LPLFSHMKVSS Trigger: AGAGGATACTTTCATATGAGAGAAGAGTGGTAGGCAGACAGCCCCACAGACATCCACAGCAAGGCCTCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654835.1 |
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| CDS GCA 72 bp | GTTGTCCAGGACCACCTGCAATCGAATCACTTGGGCTaGACCAGGACTGAACAGAACAGGCAGGAGGTATTT | + |
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Preference number: 6 (lower is better) Translates to: VVQDHLQSNHLG*TRTEQNRQEVF Trigger: AAATACCTCCTGCCTGTTCTGTTCAGTCCTGGTGCAGCCCAAGTGATTCGATTGCAGGTGGTCCTGGACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660852.1 |
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| CDS CCA 72 bp | AAGAGGTTAAATTCAGGAGGTTCCTGTATGTGGGTGTaGCAGGGAGGGATTTGGGCAGCCGTGTTTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: KRLNSGGSCMWV*QGGIWAAVFPA Trigger: TGCAGGAAACACGGCTGCCCAAATCCCTCCCTGCCACACCCACATACAGGAACCTCCTGAATTTAACCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654835.1 |
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| CDS CAA 72 bp | GCAGGGTTGGTTTCTTTGAAGGGCTCTCTCTGTGGCTaGCAGGTGGCTGTCTTCTCCCTCTGTGTTCATATG | + |
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Preference number: 6 (lower is better) Translates to: AGLVSLKGSLCG*QVAVFSLCVHM Trigger: CATATGAACACAGAGGGAGAAGACAGCCACCTGCAAGCCACAGAGAGAGCCCTTCAAAGAAACCAACCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000471719.2 ENST00000654705.1 ENST00000660852.1 ENST00000663887.1 ENST00000665841.1 ENST00000670208.1 |
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| CDS CAA 90 bp | CACAATTCTGGAGGCCAGAAACCTGAGATCAAATTGTCTGCAGGGTaGGTTTCTTTGAAGGGCTCTCTCTGTGGCTTGCAGGTGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: HNSGGQKPEIKLSAG*VSLKGSLCGLQVAV Trigger: GACAGCCACCTGCAAGCCACAGAGAGAGCCCTTCAAAGAAACCAACCCTGCAGACAATTTGATCTCAGGTTTCTGGCCTCCAGAATTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000471719.2 ENST00000654705.1 ENST00000660852.1 ENST00000663887.1 ENST00000665841.1 ENST00000670208.1 |
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| CDS CAA 90 bp | TTTTCCCTGGTAAGAGGTCCCAATGTCTCTCTGCAGCCACCTACCTaGAGTCACCGTGAGAACTGGAAAGGGAAACAGGAAGAGTGCATG | + |
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Preference number: 6 (lower is better) Translates to: FSLVRGPNVSLQPPT*SHRENWKGKQEECM Trigger: CATGCACTCTTCCTGTTTCCCTTTCCAGTTCTCACGGTGACTCAAGGTAGGTGGCTGCAGAGAGACATTGGGACCTCTTACCAGGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS GCA 72 bp | AGGTTTGGGTTTCATGCTTTCATAGTCTTTTCATTCTaGCTGCTCTTCTGGGCCATCCCAGCCCTGCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: RFGFHAFIVFSF*LLFWAIPALPW Trigger: CCAAGGCAGGGCTGGGATGGCCCAGAAGAGCAGGCAGAATGAAAAGACTATGAAAGCATGAAACCCAAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS CCA 72 bp | CATTTCACACGTTGTTCCTTGAGTCACCGTGAGAACTaGAAAGGGAAACAGGAAGAGTGCATGGGAAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: HFTRCSLSHREN*KGKQEECMGRA Trigger: CGCCCTTCCCATGCACTCTTCCTGTTTCCCTTTCCAGTTCTCACGGTGACTCAAGGAACAACGTGTGAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000467995.5 ENST00000474477.5 ENST00000654705.1 ENST00000654835.1 ENST00000660852.1 ENST00000663887.1 ENST00000665438.1 ENST00000665841.1 ENST00000670208.1 |
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| CDS CCA 72 bp | GCTTGCAGGTGGCTGTCTTCTCCCTCTGTGTTCATATaGTCTTCCCTCTGTGTGCATCTGTGTCCTAATCTC | + |
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Preference number: 6 (lower is better) Translates to: ACRWLSSPSVFI*SSLCVHLCPNL Trigger: GAGATTAGGACACAGATGCACACAGAGGGAAGACCATATGAACACAGAGGGAGAAGACAGCCACCTGCAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000471719.2 ENST00000654705.1 ENST00000660852.1 ENST00000665841.1 ENST00000670208.1 |
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| CDS CCA 72 bp | AGCCTAAAGAGGTTAAATTCAGGAGGTTCCTGTATGTaGGTGTGGCAGGGAGGGATTTGGGCAGCCGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: SLKRLNSGGSCM*VWQGGIWAAVF Trigger: AAACACGGCTGCCCAAATCCCTCCCTGCCACACCCACATACAGGAACCTCCTGAATTTAACCTCTTTAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654835.1 |
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| CDS CCA 72 bp | CCCCTTTCCCTGCCTACTGAGGCAGAACCTTGTACCTaGCAGTATATCAGATATCCACCCAGAGTAGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: PLSLPTEAEPCT*QYIRYPPRVVC Trigger: ACACACTACTCTGGGTGGATATCTGATATACTGCCAGGTACAAGGTTCTGCCTCAGTAGGCAGGGAAAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS CCA 72 bp | ATAACCAAGGAAGAGGATCCCTTCCTTTGGGTTATCTaGGGCCAGAATCCCCTCTTCTGTCACTCACCCTGT | + |
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Preference number: 6 (lower is better) Translates to: ITKEEDPFLWVI*GQNPLFCHSPC Trigger: ACAGGGTGAGTGACAGAAGAGGGGATTCTGGCCCCAGATAACCCAAAGGAAGGGATCCTCTTCCTTGGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS CAA 72 bp | GTAAGAGGTCCCAATGTCTCTCTGCAGCCACCTACCTaGAGTCACCGTGAGAACTGGAAAGGGAAACAGGAA | + |
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Preference number: 6 (lower is better) Translates to: VRGPNVSLQPPT*SHRENWKGKQE Trigger: TTCCTGTTTCCCTTTCCAGTTCTCACGGTGACTCAAGGTAGGTGGCTGCAGAGAGACATTGGGACCTCTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS CAA 72 bp | ACATTGACTGAGCACTTATATATGCAAGGCAGACCTTaGCTGAGAGAGGTGGGCTGGAGCTGTCTGCACCAG | + |
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Preference number: 6 (lower is better) Translates to: TLTEHLYMQGRP*LREVGWSCLHQ Trigger: CTGGTGCAGACAGCTCCAGCCCACCTCTCTCAGCAAAGGTCTGCCTTGCATATATAAGTGCTCAGTCAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665438.1 |
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| CDS CAA 90 bp | AAATTGTCTGCAGGGTTGGTTTCTTTGAAGGGCTCTCTCTGTGGCTaGCAGGTGGCTGTCTTCTCCCTCTGTGTTCATATGGTCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: KLSAGLVSLKGSLCG*QVAVFSLCVHMVFP Trigger: AGGGAAGACCATATGAACACAGAGGGAGAAGACAGCCACCTGCAAGCCACAGAGAGAGCCCTTCAAAGAAACCAACCCTGCAGACAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000471719.2 ENST00000654705.1 ENST00000660852.1 ENST00000663887.1 ENST00000665841.1 ENST00000670208.1 |
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| CDS TCA 72 bp | AACCTGAGATCAAATTGTCTGCAGGGTTGGTTTCTTTaGAGGGCTCTCTCTGTGGCTTGCAGGTGGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: NLRSNCLQGWFL*RALSVACRWLS Trigger: AGACAGCCACCTGCAAGCCACAGAGAGAGCCCTTCAAAGAAACCAACCCTGCAGACAATTTGATCTCAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000471719.2 ENST00000654705.1 ENST00000660852.1 ENST00000663887.1 ENST00000665841.1 ENST00000670208.1 |
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| CDS GCA 72 bp | CAAAGTGTTGTCCAGGACCACCTGCAATCGAATCACTaGACCAGGACTGAACAGAACAGGCAGGAGGTATTT | + |
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Preference number: 6 (lower is better) Translates to: QSVVQDHLQSNH*TRTEQNRQEVF Trigger: AAATACCTCCTGCCTGTTCTGTTCAGTCCTGGTGCAGTGATTCGATTGCAGGTGGTCCTGGACAACACTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665841.1 |
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| CDS CCA 72 bp | AGACATATTCCGGTGCTCATTTGCTTCACATCTCGGTaGCATTTCCCACTCCTGACTACGTCTTCAACCTGG | + |
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Preference number: 6 (lower is better) Translates to: RHIPVLICFTSR*HFPLLTTSSTW Trigger: CCAGGTTGAAGACGTAGTCAGGAGTGGGAAATGCCACCGAGATGTGAAGCAAATGAGCACCGGAATATGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS CCA 72 bp | GCTTGCAGGTGGCTGTCTTCTCCCTCTGTGTTCATATaGTCTTCCCTCTGTGTGCATCTGTGTCCTAATCTA | + |
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Preference number: 6 (lower is better) Translates to: ACRWLSSPSVFI*SSLCVHLCPNL Trigger: TAGATTAGGACACAGATGCACACAGAGGGAAGACCATATGAACACAGAGGGAGAAGACAGCCACCTGCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663887.1 |
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| CDS CAA 72 bp | AAACCTGAGATCAAATTGTCTGCAGGGTTGGTTTCTTaGAAGGGCTCTCTCTGTGGCTTGCAGGTGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: KPEIKLSAGLVS*KGSLCGLQVAV Trigger: GACAGCCACCTGCAAGCCACAGAGAGAGCCCTTCAAAGAAACCAACCCTGCAGACAATTTGATCTCAGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000471719.2 ENST00000654705.1 ENST00000660852.1 ENST00000663887.1 ENST00000665841.1 ENST00000670208.1 |
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| CDS CCA 72 bp | CACATTTTTACAGAGAACTTGAGTCACCGTGAGAACTaGAAAGGGAAACAGGAAGAGTGCATGGGAAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: HIFTENLSHREN*KGKQEECMGRA Trigger: CGCCCTTCCCATGCACTCTTCCTGTTTCCCTTTCCAGTTCTCACGGTGACTCAAGTTCTCTGTAAAAATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471719.2 |
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| CDS CAA 90 bp | CATCTGTGTCCTAATCTAGCAGATGAATCCCATATGCTTGCTGGCTaGTTTCTGCCCCAGCATTTTTCAAAGTGTTGTCCAGGACCACCT | + |
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Preference number: 6 (lower is better) Translates to: HLCPNLADESHMLAG*FLPQHFSKCCPGPP Trigger: AGGTGGTCCTGGACAACACTTTGAAAAATGCTGGGGCAGAAACAAGCCAGCAAGCATATGGGATTCATCTGCTAGATTAGGACACAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000663887.1 |
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| CDS CAA 90 bp | CTGTGTCCTAATCTCTTAGCAGATGAATCCCATATGCTTGCTGGCTaGTTTCTGCCCCAGCATTTTTCAAAGTGTTGTCCAGGACCACCT | + |
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Preference number: 6 (lower is better) Translates to: LCPNLLADESHMLAG*FLPQHFSKCCPGPP Trigger: AGGTGGTCCTGGACAACACTTTGAAAAATGCTGGGGCAGAAACAAGCCAGCAAGCATATGGGATTCATCTGCTAAGAGATTAGGACACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670208.1 |
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| CDS CAA 72 bp | TCTCACAATTCTGGAGGCCAGAAACCTGAGATCAAATaGTCTGCAGGGTTGGTTTCTTTGAAGGGCTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SHNSGGQKPEIK*SAGLVSLKGSL Trigger: GAGAGAGCCCTTCAAAGAAACCAACCCTGCAGACAATTTGATCTCAGGTTTCTGGCCTCCAGAATTGTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000471719.2 ENST00000654705.1 ENST00000660852.1 ENST00000663887.1 ENST00000665841.1 ENST00000670208.1 |
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| CDS GCA 72 bp | AATCAGTATGCCATGAGAGAGAATGAAATAGGCACCTaGACCAGGACTGAACAGAACAGGCAGGAGGTATTT | + |
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Preference number: 6 (lower is better) Translates to: NQYAMRENEIGT*TRTEQNRQEVF Trigger: AAATACCTCCTGCCTGTTCTGTTCAGTCCTGGTGCAGGTGCCTATTTCATTCTCTCTCATGGCATACTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654835.1 |
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| CDS GCA 72 bp | ATGTCCTACAGCCACCTCAAACCCATGTTCAAAACATaGCATCTTCCTCTCAGGTCCATTTCTGTTCCTCTA | + |
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Preference number: 6 (lower is better) Translates to: MSYSHLKPMFKT*HLPLRSISVPL Trigger: TAGAGGAACAGAAATGGACCTGAGAGGAAGATGGCATGTTTTGAACATGGGTTTGAGGTGGCTGTAGGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS CCA 72 bp | ACCCAGAGTAGTGTGTATGAGTGGATGAATGAACTATaGTGCTACAGAACACCATGGCTCCAACTTGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: TQSSVYEWMNEL*CYRTPWLQLES Trigger: AGACTCAAGTTGGAGCCATGGTGTTCTGTAGCACCATAGTTCATTCATCCACTCATACACACTACTCTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS CAA 90 bp | GATAAATTATCACTCACAGCAGATGAATCCCATATGCTTGCTGGCTaGTTTCTGCCCCAGCATTTTTCAAAGTGTTGTCCAGGACCACCT | + |
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Preference number: 6 (lower is better) Translates to: DKLSLTADESHMLAG*FLPQHFSKCCPGPP Trigger: AGGTGGTCCTGGACAACACTTTGAAAAATGCTGGGGCAGAAACAAGCCAGCAAGCATATGGGATTCATCTGCTGTGAGTGATAATTTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000471719.2 ENST00000654705.1 ENST00000660852.1 ENST00000665841.1 |
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| CDS GCA 72 bp | ATTGTCAAATACAACAGACATATTCCGGTGCTCATTTaGTTCACATCTCGGTGGCATTTCCCACTCCTGACT | + |
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Preference number: 6 (lower is better) Translates to: IVKYNRHIPVLI*FTSRWHFPLLT Trigger: AGTCAGGAGTGGGAAATGCCACCGAGATGTGAAGCAAATGAGCACCGGAATATGTCTGTTGTATTTGACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS CCA 72 bp | ATTTGTATAGGAAAAGTTATTCAAATAGTGACCACGTaGTCAACAGGTGTTCAGTGCACGGGGAGGTACAGG | + |
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Preference number: 6 (lower is better) Translates to: ICIGKVIQIVTT*STGVQCTGRYR Trigger: CCTGTACCTCCCCGTGCACTGAACACCTGTTGACCACGTGGTCACTATTTGAATAACTTTTCCTATACAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654835.1 |
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| CDS CAA 90 bp | AATTTATTTTCTCACAATTCTGGAGGCCAGAAACCTGAGATCAAATaGTCTGCAGGGTTGGTTTCTTTGAAGGGCTCTCTCTGTGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: NLFSHNSGGQKPEIK*SAGLVSLKGSLCGL Trigger: CAAGCCACAGAGAGAGCCCTTCAAAGAAACCAACCCTGCAGACAATTTGATCTCAGGTTTCTGGCCTCCAGAATTGTGAGAAAATAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000471719.2 ENST00000654705.1 ENST00000660852.1 ENST00000663887.1 ENST00000665841.1 ENST00000670208.1 |
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| CDS CAA 90 bp | CAGTTCAGCTTATCAAAGTTTGCCCTTTCGTCCATTCTTCAGACATaGACTGAGCACTTATATATGCAAGGCAGACCTTTGCTGAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: QFSLSKFALSSILQT*TEHLYMQGRPLLRE Trigger: CTCTCTCAGCAAAGGTCTGCCTTGCATATATAAGTGCTCAGTCAATGTCTGAAGAATGGACGAAAGGGCAAACTTTGATAAGCTGAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665438.1 |
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| CDS TCA 72 bp | AAAGTTTGCCCTTTCGTCCATTCTTCAGACATTGACTaGGCACTTATATATGCAAGGCAGACCTTTGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: KVCPFVHSSDID*ALIYARQTFAE Trigger: CTCAGCAAAGGTCTGCCTTGCATATATAAGTGCTCAGTCAATGTCTGAAGAATGGACGAAAGGGCAAACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665438.1 |
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| CDS GCA 72 bp | TCCTTAGGATCTGGTATCTGTCAGGTTTGGGTTTCATaGTTTCATAGTCTTTTCATTCTGCCTGCTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SLGSGICQVWVS*FHSLFILPALL Trigger: CAGAAGAGCAGGCAGAATGAAAAGACTATGAAAGCATGAAACCCAAACCTGACAGATACCAGATCCTAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS CCA 72 bp | TGCTTCACTAAGGCCATCCAACTAGTAGTGTGGTTCTaGAAATCATCATATCAAACCCAGGTCTGTCTGATT | + |
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Preference number: 6 (lower is better) Translates to: CFTKAIQLVVWF*KSSYQTQVCLI Trigger: AATCAGACAGACCTGGGTTTGATATGATGATTTCCAGAACCACACTACTAGTTGGATGGCCTTAGTGAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665841.1 |
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| CDS CCA 72 bp | GTATATCAGATATCCACCCAGAGTAGTGTGTATGAGTaGATGAATGAACTATGGTGCTACAGAACACCATGG | + |
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Preference number: 6 (lower is better) Translates to: VYQISTQSSVYE*MNELWCYRTPW Trigger: CCATGGTGTTCTGTAGCACCATAGTTCATTCATCCACTCATACACACTACTCTGGGTGGATATCTGATATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS TCA 72 bp | TATCAAAGTTTGCCCTTTCGTCCATTCTTCAGACATTaGCTGAGCACTTATATATGCAAGGCAGACCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: YQSLPFRPFFRH*LSTYICKADLC Trigger: GCAAAGGTCTGCCTTGCATATATAAGTGCTCAGTCAATGTCTGAAGAATGGACGAAAGGGCAAACTTTGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665438.1 |
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| CDS GCA 72 bp | AAAACATTGCACGAATATTTATTTGAGAGCCTTCCATaGGCAGGCACTGTGCTAAACAATGTGCACCTTATC | + |
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Preference number: 6 (lower is better) Translates to: KTLHEYLFESLP*AGTVLNNVHLI Trigger: GATAAGGTGCACATTGTTTAGCACAGTGCCTGCGCATGGAAGGCTCTCAAATAAATATTCGTGCAATGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000654705.1 ENST00000660852.1 ENST00000665841.1 ENST00000666301.1 |
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| CDS CAA 72 bp | TTTCCATTTCTCCATCTGTTCCTCAGGATCTCTTATTaGATCCTTAGGATCTGGTATCTGTCAGGTTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: FPFLHLFLRISY*ILRIWYLSGLG Trigger: ACCCAAACCTGACAGATACCAGATCCTAAGGATCAAATAAGAGATCCTGAGGAACAGATGGAGAAATGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS TCA 72 bp | TACAGAACACCATGGCTCCAACTTGAGTCTGAAACTTaGTGTCATTTTGCCTTTCACAGTTTTTCACTGCTT | + |
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Preference number: 6 (lower is better) Translates to: YRTPWLQLESET*CHFAFHSFSLL Trigger: AAGCAGTGAAAAACTGTGAAAGGCAAAATGACATCAAGTTTCAGACTCAAGTTGGAGCCATGGTGTTCTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666301.1 |
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| CDS TCA 72 bp | AACCCTTTTGAAATGCTAGTGATTGAAGAAGGATCTTaGCTATCCTTTGCAAATCTCGAACAAGAAAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: NPFEMLVIEEGS*LSFANLEQERP Trigger: GGGCCTTTCTTGTTCGAGATTTGCAAAGGATAGTCAAGATCCTTCTTCAATCACTAGCATTTCAAAAGGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665438.1 |
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| CDS CAA 72 bp | ATAAATTATCACTCACAGCAGATGAATCCCATATGCTaGCTGGCTTGTTTCTGCCCCAGCATTTTTCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: INYHSQQMNPIC*LACFCPSIFQS Trigger: ACTTTGAAAAATGCTGGGGCAGAAACAAGCCAGCAAGCATATGGGATTCATCTGCTGTGAGTGATAATTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000471719.2 ENST00000654705.1 ENST00000660852.1 ENST00000665841.1 |
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| CDS TCA 72 bp | ATGTGTCAAACTTTGGCATTTGTATTAAACAGAGTTTaGGGAAACCAGGCAGGTTTGACTGAGAATCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: MCQTLAFVLNRV*GNQAGLTENLF Trigger: GAAGAGATTCTCAGTCAAACCTGCCTGGTTTCCTCAAACTCTGTTTAATACAAATGCCAAAGTTTGACACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471719.2 |
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