Pregenerated sensors for LINC00879 (Homo sapiens)
Ensembl gene IDs: ENSG00000239589, ENSG00000285436Ensembl transcript IDs: ENST00000462219.6, ENST00000466560.2, ENST00000470465.1, ENST00000644403.3, ENST00000646853.2, ENST00000651628.2, ENST00000651942.1, ENST00000652877.1, ENST00000652962.1, ENST00000652972.2, ENST00000654384.2, ENST00000654445.1, ENST00000655052.1, ENST00000655102.1, ENST00000655186.1, ENST00000655431.1, ENST00000655736.1, ENST00000656093.1, ENST00000656113.1, ENST00000656651.1, ENST00000657388.2, ENST00000657523.1, ENST00000658118.1, ENST00000659054.2, ENST00000660591.1, ENST00000660677.1, ENST00000660749.2, ENST00000660887.1, ENST00000661261.1, ENST00000661499.1, ENST00000662601.2, ENST00000663137.1, ENST00000664338.1, ENST00000664608.1, ENST00000665136.1, ENST00000665152.1, ENST00000665306.1, ENST00000665486.1, ENST00000665609.1, ENST00000665896.1, ENST00000666801.1, ENST00000666833.1, ENST00000667907.1, ENST00000668435.1, ENST00000668600.1, ENST00000668707.1, ENST00000668785.1, ENST00000669317.1, ENST00000669603.1, ENST00000670450.1, ENST00000671484.2, ENST00000671623.1, ENST00000672651.1, ENST00000672710.1, ENST00000672979.1, ENST00000673191.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGGTTCAGTTCTTGGCAGACATCAAATCTGCCAGAGACTTCATCTTaGACTTCTCAGCTCTCAGATCTGTTTCCTGGCGTCCGCCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: WFSSWQTSNLPETSS*TSQLSDLFPGVRRL Trigger: CAGCCGGCGGACGCCAGGAAACAGATCTGAGAGCTGAGAAGTCCAAGATGAAGTCTCTGGCAGATTTGATGTCTGCCAAGAACTGAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655431.1 ENST00000656093.1 ENST00000660887.1 ENST00000669603.1 |
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| CDS CCA 90 bp | AGAGCATATTGGTGGTTACCAACGGATCGGGGAAGGCAGTTGGGATaGGCCAAGTGGAGACGTTGGTCAAAGGATACAAAGTTCCAGTTA | + |
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Preference number: 5 (lower is better) Translates to: RAYWWLPTDRGRQLG*AKWRRWSKDTKFQL Trigger: TAACTGGAACTTTGTATCCTTTGACCAACGTCTCCACTTGGCCCATCCCAACTGCCTTCCCCGATCCGTTGGTAACCACCAATATGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652962.1 |
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| CDS TCA 90 bp | CCGTCTCTCGATGTCCTCATATGGCCTGTTCCCTTTTCAGAATGCTaGCTACAGGTGGTATTAACCGTATGGATCCACAGACATGACGAC | + |
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Preference number: 5 (lower is better) Translates to: PSLDVLIWPVPFSEC*LQVVLTVWIHRHDD Trigger: GTCGTCATGTCTGTGGATCCATACGGTTAATACCACCTGTAGTCAGCATTCTGAAAAGGGAACAGGCCATATGAGGACATCGAGAGACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652962.1 |
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| CDS TCA 90 bp | TTTTTGCTAGTGGAGAGTCTTGCCTCAGTGTTCATTGTTGTTGAGTaGGCAGGGTGGTGGTTACTTAAGGCTGGGGTGGCTGTGACTATT | + |
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Preference number: 5 (lower is better) Translates to: FLLVESLASVFIVVE*AGWWLLKAGVAVTI Trigger: AATAGTCACAGCCACCCCAGCCTTAAGTAACCACCACCCTGCTCACTCAACAACAATGAACACTGAGGCAAGACTCTCCACTAGCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000658118.1 ENST00000665152.1 |
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| CDS TCA 90 bp | ACTACCTATGTTTGGGCCGGAAATATCGCACATGGCATTTCGACCTaGAGTTGGACTCCTCACCCTGTAGCACTTAATCTAACATTGCCT | + |
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Preference number: 5 (lower is better) Translates to: TTYVWAGNIAHGIST*SWTPHPVALNLTLP Trigger: AGGCAATGTTAGATTAAGTGCTACAGGGTGAGGAGTCCAACTTCAGGTCGAAATGCCATGTGCGATATTTCCGGCCCAAACATAGGTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655102.1 ENST00000667907.1 |
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| CDS TCA 90 bp | CAGATTTCATTCCCAAATCTGTATCAGCAGAACAAGTGTTGTTCCTaGTCTCTAGATGCCCCTAAACAGCATCACTACGTAAGACGCCCC | + |
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Preference number: 5 (lower is better) Translates to: QISFPNLYQQNKCCS*SLDAPKQHHYVRRP Trigger: GGGGCGTCTTACGTAGTGATGCTGTTTAGGGGCATCTAGAGATCAGGAACAACACTTGTTCTGCTGATACAGATTTGGGAATGAAATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000654445.1 ENST00000660591.1 ENST00000665136.1 ENST00000666801.1 |
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| CDS GCA 90 bp | ATCTGTGTCTATCAGCAATTTGTTCTTTCTTTGTATGTGAGAGGATaGTGGGTGGTATTCCACTCTTCAGAGGAAGGGAAGTTCAGGGGT | + |
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Preference number: 5 (lower is better) Translates to: ICVYQQFVLSLYVRG*WVVFHSSEEGKFRG Trigger: ACCCCTGAACTTCCCTTCCTCTGAAGAGTGGAATACCACCCAGCATCCTCTCACATACAAAGAAAGAACAAATTGCTGATAGACACAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470465.1 |
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| CDS CCA 90 bp | TGTGTCTATCAGCAATTTGTTCTTTCTTTGTATGTGAGAGGATGCTaGGTGGTATTCCACTCTTCAGAGGAAGGGAAGTTCAGGGGTAAG | + |
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Preference number: 5 (lower is better) Translates to: CVYQQFVLSLYVRGC*VVFHSSEEGKFRGK Trigger: CTTACCCCTGAACTTCCCTTCCTCTGAAGAGTGGAATACCACCCAGCATCCTCTCACATACAAAGAAAGAACAAATTGCTGATAGACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470465.1 |
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| CDS GCA 90 bp | TTATTTCTCACATTCTTGGGGCTGGAAGTCCAATATCAAGGTGCTTaGAGGTTTGGTTTCTCCTTTTTCAGAAAGAATCCTCCCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LFLTFLGLEVQYQGA*RFGFSFFRKNPPFL Trigger: CAAGAAGGGAGGATTCTTTCTGAAAAAGGAGAAACCAAACCTGCAAGCACCTTGATATTGGACTTCCAGCCCCAAGAATGTGAGAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652962.1 |
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| CDS GCA 90 bp | GGTTCAGTTCTTGGCTTCATAAAGGAATATTGTAGCATCAGTAACTaGAGACATCAAATCTGCCAGAGACTTCATCTTGGACTTCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: GSVLGFIKEYCSISN*RHQICQRLHLGLLS Trigger: GCTGAGAAGTCCAAGATGAAGTCTCTGGCAGATTTGATGTCTGCAGTTACTGATGCTACAATATTCCTTTATGAAGCCAAGAACTGAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655186.1 ENST00000666833.1 |
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| CDS GCA 90 bp | TTCCACTCTATAGGTATAGGGAATATTGTTTATTCACCTAATGAGTaGACTTACGACTTTCCCCCAAGGGATGGGTCCCAAATATGTCTC | + |
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Preference number: 5 (lower is better) Translates to: FHSIGIGNIVYSPNE*TYDFPPRDGSQICL Trigger: GAGACATATTTGGGACCCATCCCTTGGGGGAAAGTCGTAAGTGCACTCATTAGGTGAATAAACAATATTCCCTATACCTATAGAGTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665486.1 |
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| CDS TCA 90 bp | AGAATGCTGACTACAGGTGGTATTAACCGTATGGATCCACAGACATaGCGACTTTTGAGATTGATGGACATCTGTGTCTATCAGCAATTT | + |
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Preference number: 5 (lower is better) Translates to: RMLTTGGINRMDPQT*RLLRLMDICVYQQF Trigger: AAATTGCTGATAGACACAGATGTCCATCAATCTCAAAAGTCGTCATGTCTGTGGATCCATACGGTTAATACCACCTGTAGTCAGCATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652962.1 |
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| CDS GCA 90 bp | GGCTTCATAAAGGAATATTGTAGCATCAGTAACAGACATCAAATCTaGCAGAGACTTCATCTTGGACTTCTCAGCTCTCAGATCTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: GFIKEYCSISNRHQI*QRLHLGLLSSQICF Trigger: GAAACAGATCTGAGAGCTGAGAAGTCCAAGATGAAGTCTCTGGCAGATTTGATGTCTGTTACTGATGCTACAATATTCCTTTATGAAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665306.1 ENST00000669317.1 |
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| CDS GCA 90 bp | AAATTTATTTCTCACATTCTTGGGGCTGGAAGTCCAATATCAAGGTaGTTGCAGGTTTGGTTTCTCCTTTTTCAGAAAGAATCCTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: KFISHILGAGSPISR*LQVWFLLFQKESSL Trigger: AAGGGAGGATTCTTTCTGAAAAAGGAGAAACCAAACCTGCAAGCACCTTGATATTGGACTTCCAGCCCCAAGAATGTGAGAAATAAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652962.1 |
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| CDS TCA 90 bp | TTTAATCACCATAAACTACAAGTAACCAAGATGTCCTTCCACAGATaGATGGATAAACAAACTGTGGTACCTGTACCATTTCTGTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: FNHHKLQVTKMSFHR*MDKQTVVPVPFLLP Trigger: GGGCAACAGAAATGGTACAGGTACCACAGTTTGTTTATCCATTCATCTGTGGAAGGACATCTTGGTTACTTGTAGTTTATGGTGATTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656093.1 ENST00000656651.1 ENST00000660887.1 ENST00000663137.1 |
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| CDS TCA 90 bp | TGGTTAAGATACGATAGTTTCAGTTGTAACCTGGTTTGGTCAAAATaGAATGTGCCTATTGAAAATTGGTGGGAAATTAACCTGGACAGT | + |
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Preference number: 5 (lower is better) Translates to: WLRYDSFSCNLVWSK*NVPIENWWEINLDS Trigger: ACTGTCCAGGTTAATTTCCCACCAATTTTCAATAGGCACATTTCATTTTGACCAAACCAGGTTACAACTGAAACTATCGTATCTTAACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000656113.1 ENST00000657523.1 ENST00000660749.2 ENST00000661499.1 |
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| CDS CCA 90 bp | GTTTTTAACTTGTCCTTCATTTATTTACATAAGGAGTCCACAAACTaGCATCACCAATACAGCGCACTCTCATACTTAATGGTTTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: VFNLSFIYLHKESTN*HHQYSALSYLMVFR Trigger: TCTGAAAACCATTAAGTATGAGAGTGCGCTGTATTGGTGATGCCAGTTTGTGGACTCCTTATGTAAATAAATGAAGGACAAGTTAAAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000656113.1 ENST00000664338.1 ENST00000665152.1 ENST00000668707.1 ENST00000670450.1 ENST00000671623.1 |
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| CDS TCA 90 bp | TTTTGCTGGCTCCAGGCTCAACTGCAGACTTTCTTAATCCTTTCATaGGCATTTCATTCAGATATTTCTTCAAAAGTTAATCATCGATAT | + |
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Preference number: 5 (lower is better) Translates to: FCWLQAQLQTFLILS*AFHSDISSKVNHRY Trigger: ATATCGATGATTAACTTTTGAAGAAATATCTGAATGAAATGCTCATGAAAGGATTAAGAAAGTCTGCAGTTGAGCCTGGAGCCAGCAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000656113.1 ENST00000664338.1 ENST00000668600.1 ENST00000670450.1 |
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| CDS CCA 72 bp | GCTTTCAGACGGGCTGAAACACACTACCAGCAGCCCTaGGTCTCCAGCTTGCAGACAGCCTGTCTGGGACGA | + |
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Preference number: 6 (lower is better) Translates to: AFRRAETHYQQP*VSSLQTACLGR Trigger: TCGTCCCAGACAGGCTGTCTGCAAGCTGGAGACCCAGGGCTGCTGGTAGTGTGTTTCAGCCCGTCTGAAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000644403.3 ENST00000651628.2 ENST00000652972.2 ENST00000662601.2 ENST00000672651.1 ENST00000672710.1 ENST00000672979.1 ENST00000673191.1 |
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| CDS GCA 72 bp | CTGAAACACACTACCAGCAGCCCTGGGTCTCCAGCTTaGAGACAGCCTGTCTGGGACGAGCATCACATTTTG | + |
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Preference number: 6 (lower is better) Translates to: LKHTTSSPGSPA*RQPVWDEHHIL Trigger: CAAAATGTGATGCTCGTCCCAGACAGGCTGTCTGCAAGCTGGAGACCCAGGGCTGCTGGTAGTGTGTTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000644403.3 ENST00000651628.2 ENST00000652972.2 ENST00000662601.2 ENST00000672651.1 ENST00000672710.1 ENST00000672979.1 ENST00000673191.1 |
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| CDS CCA 72 bp | TGGTGGTTACCAACGGATCGGGGAAGGCAGTTGGGATaGGCCAAGTGGAGACGTTGGTCAAAGGATACAAAG | + |
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Preference number: 6 (lower is better) Translates to: WWLPTDRGRQLG*AKWRRWSKDTK Trigger: CTTTGTATCCTTTGACCAACGTCTCCACTTGGCCCATCCCAACTGCCTTCCCCGATCCGTTGGTAACCACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652962.1 |
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| CDS CAA 90 bp | TTCAGACGGGCTGAAACACACTACCAGCAGCCCTGGGTCTCCAGCTaGCAGACAGCCTGTCTGGGACGAGCATCACATTTTGAAGATGTT | + |
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Preference number: 6 (lower is better) Translates to: FRRAETHYQQPWVSS*QTACLGRASHFEDV Trigger: AACATCTTCAAAATGTGATGCTCGTCCCAGACAGGCTGTCTGCAAGCTGGAGACCCAGGGCTGCTGGTAGTGTGTTTCAGCCCGTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000644403.3 ENST00000651628.2 ENST00000652972.2 ENST00000662601.2 ENST00000672651.1 ENST00000672710.1 ENST00000672979.1 ENST00000673191.1 |
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| CDS CAA 90 bp | CTCCTTTGCCTCTCCCAGTTCCGACAGCCCCAGGTATTCCTTGGTTaGTGGCAGCGTAACTCTCATCTCCTACTCCATCTTCACAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LLCLSQFRQPQVFLG*WQRNSHLLLHLHKA Trigger: AGCCTTGTGAAGATGGAGTAGGAGATGAGAGTTACGCTGCCACAAACCAAGGAATACCTGGGGCTGTCGGAACTGGGAGAGGCAAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000672651.1 ENST00000672710.1 ENST00000672979.1 |
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| CDS CAA 72 bp | CTATCCTGGAGCTGGGGCATCTTATTTCTCCTTCCCTaGGACATCAGAACTCCAGGACCTCTGGCCTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: LSWSWGILFLLP*DIRTPGPLAFG Trigger: TCCAAAGGCCAGAGGTCCTGGAGTTCTGATGTCCAAGGGAAGGAGAAATAAGATGCCCCAGCTCCAGGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000644403.3 ENST00000651628.2 ENST00000652972.2 ENST00000672651.1 ENST00000672710.1 ENST00000672979.1 ENST00000673191.1 |
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| CDS CAA 72 bp | TCGGGGAAGGCAGTTGGGATGGGCCAAGTGGAGACGTaGGTCAAAGGATACAAAGTTCCAGTTACACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SGKAVGMGQVET*VKGYKVPVTQE Trigger: CTCCTGTGTAACTGGAACTTTGTATCCTTTGACCAACGTCTCCACTTGGCCCATCCCAACTGCCTTCCCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652962.1 |
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| CDS CAA 90 bp | GAGCTGAGAGCATATTGGTGGTTACCAACGGATCGGGGAAGGCAGTaGGGATGGGCCAAGTGGAGACGTTGGTCAAAGGATACAAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: ELRAYWWLPTDRGRQ*GWAKWRRWSKDTKF Trigger: GAACTTTGTATCCTTTGACCAACGTCTCCACTTGGCCCATCCCAACTGCCTTCCCCGATCCGTTGGTAACCACCAATATGCTCTCAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652962.1 |
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| CDS CAA 90 bp | TTGGTTCAGTTCTTGGCAGACATCAAATCTGCCAGAGACTTCATCTaGGACTTCTCAGCTCTCAGATCTGTTTCCTGGCGTCCGCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: LVQFLADIKSARDFI*DFSALRSVSWRPPA Trigger: AGCCGGCGGACGCCAGGAAACAGATCTGAGAGCTGAGAAGTCCAAGATGAAGTCTCTGGCAGATTTGATGTCTGCCAAGAACTGAACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655431.1 ENST00000656093.1 ENST00000660887.1 ENST00000669603.1 |
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| CDS TCA 72 bp | GGTTTCCAGAGGAGAATGGCGTATGAGTCAGTGGATTaGGAAGGGGAGATTTCCCCTCAATGTGGGCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: GFQRRMAYESVD*EGEISPQCGLA Trigger: TGCTAGCCCACATTGAGGGGAAATCTCCCCTTCTCAATCCACTGACTCATACGCCATTCTCCTCTGGAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000672651.1 ENST00000672710.1 ENST00000672979.1 ENST00000673191.1 |
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| CDS CCA 72 bp | AGCAGCCCTGGGTCTCCAGCTTGCAGACAGCCTGTCTaGGACGAGCATCACATTTTGAAGATGTTGAAACTA | + |
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Preference number: 6 (lower is better) Translates to: SSPGSPACRQPV*DEHHILKMLKL Trigger: TAGTTTCAACATCTTCAAAATGTGATGCTCGTCCCAGACAGGCTGTCTGCAAGCTGGAGACCCAGGGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000644403.3 ENST00000651628.2 ENST00000652972.2 ENST00000662601.2 ENST00000672651.1 ENST00000672710.1 ENST00000672979.1 ENST00000673191.1 |
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| CDS CAA 90 bp | GCTTGCAGGTTTGGTTTCTCCTTTTTCAGAAAGAATCCTCCCTTCTaGGCTTGTAGACAGTCCCGTCTCTCGATGTCCTCATATGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ACRFGFSFFRKNPPF*ACRQSRLSMSSYGL Trigger: CAGGCCATATGAGGACATCGAGAGACGGGACTGTCTACAAGCCAAGAAGGGAGGATTCTTTCTGAAAAAGGAGAAACCAAACCTGCAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652962.1 |
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| CDS CAA 90 bp | ATTGTAGCATCAGTAACAGACATCAAATCTGCCAGAGACTTCATCTaGGACTTCTCAGCTCTCAGATCTGTTTCCTGGCGTCCGCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: IVASVTDIKSARDFI*DFSALRSVSWRPPA Trigger: AGCCGGCGGACGCCAGGAAACAGATCTGAGAGCTGAGAAGTCCAAGATGAAGTCTCTGGCAGATTTGATGTCTGTTACTGATGCTACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665306.1 ENST00000669317.1 |
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| CDS CCA 72 bp | GTCAGTGGATTGAGAAGGGGAGATTTCCCCTCAATGTaGGCTAGCACCATTCAAACATCTGAGTTCCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: VSGLRRGDFPSM*ASTIQTSEFLD Trigger: ATCCAGGAACTCAGATGTTTGAATGGTGCTAGCCCACATTGAGGGGAAATCTCCCCTTCTCAATCCACTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000672651.1 ENST00000672710.1 ENST00000672979.1 ENST00000673191.1 |
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| CDS TCA 72 bp | GATGTCCTCATATGGCCTGTTCCCTTTTCAGAATGCTaGCTACAGGTGGTATTAACCGTATGGATCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: DVLIWPVPFSEC*LQVVLTVWIHR Trigger: TCTGTGGATCCATACGGTTAATACCACCTGTAGTCAGCATTCTGAAAAGGGAACAGGCCATATGAGGACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652962.1 |
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| CDS CAA 72 bp | TTTGGTTTCTCCTTTTTCAGAAAGAATCCTCCCTTCTaGGCTTGTAGACAGTCCCGTCTCTCGATGTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: FGFSFFRKNPPF*ACRQSRLSMSS Trigger: TGAGGACATCGAGAGACGGGACTGTCTACAAGCCAAGAAGGGAGGATTCTTTCTGAAAAAGGAGAAACCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652962.1 |
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| CDS CAA 72 bp | TGGGGCTGGAAGTCCAATATCAAGGTGCTTGCAGGTTaGGTTTCTCCTTTTTCAGAAAGAATCCTCCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: WGWKSNIKVLAG*VSPFSERILPS Trigger: AGAAGGGAGGATTCTTTCTGAAAAAGGAGAAACCAAACCTGCAAGCACCTTGATATTGGACTTCCAGCCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652962.1 |
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| CDS TCA 72 bp | TCTTGGGCCTCCAACACAACATGGCTTTATGCATCGTaGTATAAATCAGGTGTCTCCAATATCCTGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: SWASNTTWLYAS*YKSGVSNILLQ Trigger: CTGAAGCAGGATATTGGAGACACCTGATTTATATCACGATGCATAAAGCCATGTTGTGTTGGAGGCCCAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668435.1 |
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| CDS GCA 72 bp | GCGGGTCATGCATATACTTTTAGTGATGATGTCTTTTaGTGGCTCCAGGCTCAACTGCAGACTTTCTTAATC | + |
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Preference number: 6 (lower is better) Translates to: AGHAYTFSDDVF*WLQAQLQTFLI Trigger: GATTAAGAAAGTCTGCAGTTGAGCCTGGAGCCAGCAAAAGACATCATCACTAAAAGTATATGCATGACCCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000652877.1 ENST00000656113.1 ENST00000658118.1 ENST00000664338.1 ENST00000664608.1 ENST00000665152.1 ENST00000668600.1 ENST00000668707.1 ENST00000670450.1 ENST00000671623.1 |
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| CDS GCA 72 bp | ACACATTGGGCTAGACCTCGACATTTAGCCGTATTCTaGCAGCCTTTTATATTTCACATGAGTGACTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: THWARPRHLAVF*QPFIFHMSDCS Trigger: ACTGCAGTCACTCATGTGAAATATAAAAGGCTGGCAGAATACGGCTAAATGTCGAGGTCTAGCCCAATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000656113.1 ENST00000664338.1 ENST00000665152.1 ENST00000668707.1 ENST00000670450.1 ENST00000671623.1 |
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| CDS CCA 72 bp | AAGTCCTCAATAAAGACACCTCCAAATGAAGGCACTTaGGCTAAAAATGCAGCTATGCATAAGGACATGGCC | + |
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Preference number: 6 (lower is better) Translates to: KSSIKTPPNEGT*AKNAAMHKDMA Trigger: GGCCATGTCCTTATGCATAGCTGCATTTTTAGCCCAAGTGCCTTCATTTGGAGGTGTCTTTATTGAGGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655102.1 ENST00000667907.1 |
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| CDS CAA 72 bp | TCTTCTCATCAAGTGGTAGTTTATGTTGTTTGTATTTaGGTTCAGTTCTTGGCTGTTTCCTGGCGTCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: SSHQVVVYVVCI*VQFLAVSWRPP Trigger: CGGCGGACGCCAGGAAACAGCCAAGAACTGAACCAAAATACAAACAACATAAACTACCACTTGATGAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000466560.2 ENST00000646853.2 ENST00000652972.2 ENST00000654384.2 ENST00000654445.1 ENST00000655052.1 ENST00000655736.1 ENST00000656651.1 ENST00000657388.2 ENST00000657523.1 ENST00000660591.1 ENST00000660677.1 ENST00000661261.1 ENST00000661499.1 ENST00000663137.1 ENST00000664608.1 ENST00000665136.1 ENST00000666801.1 ENST00000668707.1 ENST00000668785.1 ENST00000670450.1 ENST00000671484.2 |
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| CDS CAA 72 bp | CACATTCTTGGGGCTGGAAGTCCAATATCAAGGTGCTaGCAGGTTTGGTTTCTCCTTTTTCAGAAAGAATCC | + |
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Preference number: 6 (lower is better) Translates to: HILGAGSPISRC*QVWFLLFQKES Trigger: GGATTCTTTCTGAAAAAGGAGAAACCAAACCTGCAAGCACCTTGATATTGGACTTCCAGCCCCAAGAATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652962.1 |
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| CDS TCA 72 bp | TTCTCTTCTGGGATGTCATCAACAATGGATTCTTCATaGCCAGTAACCCACACTGGACTTGTCACAATTACC | + |
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Preference number: 6 (lower is better) Translates to: FSSGMSSTMDSS*PVTHTGLVTIT Trigger: GGTAATTGTGACAAGTCCAGTGTGGGTTACTGGTCATGAAGAATCCATTGTTGATGACATCCCAGAAGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000462219.6 ENST00000470465.1 ENST00000651942.1 ENST00000665896.1 ENST00000668435.1 ENST00000668600.1 |
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| CDS GCA 72 bp | TATCAGCAATTTGTTCTTTCTTTGTATGTGAGAGGATaGTGGGTGGTATTCCACTCTTCAGAGGAAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: YQQFVLSLYVRG*WVVFHSSEEGK Trigger: CTTCCCTTCCTCTGAAGAGTGGAATACCACCCAGCATCCTCTCACATACAAAGAAAGAACAAATTGCTGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470465.1 |
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| CDS GCA 72 bp | ACATTCTTGGGGCTGGAAGTCCAATATCAAGGTGCTTaGAGGTTTGGTTTCTCCTTTTTCAGAAAGAATCCT | + |
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Preference number: 6 (lower is better) Translates to: TFLGLEVQYQGA*RFGFSFFRKNP Trigger: AGGATTCTTTCTGAAAAAGGAGAAACCAAACCTGCAAGCACCTTGATATTGGACTTCCAGCCCCAAGAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652962.1 |
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| CDS GCA 72 bp | TCTCACATTCTTGGGGCTGGAAGTCCAATATCAAGGTaGTTGCAGGTTTGGTTTCTCCTTTTTCAGAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: SHILGAGSPISR*LQVWFLLFQKE Trigger: TTCTTTCTGAAAAAGGAGAAACCAAACCTGCAAGCACCTTGATATTGGACTTCCAGCCCCAAGAATGTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652962.1 |
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| CDS GCA 72 bp | TTGTATTTTGGTTCAGTTCTTGGCAGACATCAAATCTaGCAGAGACTTCATCTTGGACTTCTCAGCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LYFGSVLGRHQI*QRLHLGLLSSQ Trigger: CTGAGAGCTGAGAAGTCCAAGATGAAGTCTCTGGCAGATTTGATGTCTGCCAAGAACTGAACCAAAATACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655431.1 ENST00000656093.1 ENST00000660887.1 ENST00000669603.1 |
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| CDS GCA 72 bp | GAATATTGTAGCATCAGTAACTGCAGACATCAAATCTaGCAGAGACTTCATCTTGGACTTCTCAGCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: EYCSISNCRHQI*QRLHLGLLSSQ Trigger: CTGAGAGCTGAGAAGTCCAAGATGAAGTCTCTGGCAGATTTGATGTCTGCAGTTACTGATGCTACAATATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655186.1 ENST00000666833.1 |
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| CDS GCA 72 bp | ATAGGTATAGGGAATATTGTTTATTCACCTAATGAGTaGACTTACGACTTTCCCCCAAGGGATGGGTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: IGIGNIVYSPNE*TYDFPPRDGSQ Trigger: TTGGGACCCATCCCTTGGGGGAAAGTCGTAAGTGCACTCATTAGGTGAATAAACAATATTCCCTATACCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665486.1 |
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| CDS TCA 72 bp | ACTACAGGTGGTATTAACCGTATGGATCCACAGACATaGCGACTTTTGAGATTGATGGACATCTGTGTCTAT | + |
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Preference number: 6 (lower is better) Translates to: TTGGINRMDPQT*RLLRLMDICVY Trigger: ATAGACACAGATGTCCATCAATCTCAAAAGTCGTCATGTCTGTGGATCCATACGGTTAATACCACCTGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652962.1 |
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| CDS GCA 72 bp | AAGGAATATTGTAGCATCAGTAACAGACATCAAATCTaGCAGAGACTTCATCTTGGACTTCTCAGCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: KEYCSISNRHQI*QRLHLGLLSSQ Trigger: CTGAGAGCTGAGAAGTCCAAGATGAAGTCTCTGGCAGATTTGATGTCTGTTACTGATGCTACAATATTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000665306.1 ENST00000669317.1 |
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| CDS CCA 72 bp | GGTCATGCATATACTTTTAGTGATGATGTCTTTTGCTaGCTCCAGGCTCAACTGCAGACTTTCTTAATCCTT | + |
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Preference number: 6 (lower is better) Translates to: GHAYTFSDDVFC*LQAQLQTFLIL Trigger: AAGGATTAAGAAAGTCTGCAGTTGAGCCTGGAGCCAGCAAAAGACATCATCACTAAAAGTATATGCATGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000652877.1 ENST00000656113.1 ENST00000658118.1 ENST00000664338.1 ENST00000664608.1 ENST00000665152.1 ENST00000668600.1 ENST00000668707.1 ENST00000670450.1 ENST00000671623.1 |
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| CDS CAA 72 bp | ATGGTGATTGCACAGTGCAGGAAGAAGTACCCTTCATaGACAGTGGAAATTCAAAGTGGTAAACCACTTTTG | + |
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Preference number: 6 (lower is better) Translates to: MVIAQCRKKYPS*TVEIQSGKPLL Trigger: CAAAAGTGGTTTACCACTTTGAATTTCCACTGTCAATGAAGGGTACTTCTTCCTGCACTGTGCAATCACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656093.1 ENST00000660887.1 |
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| CDS CAA 90 bp | TTGAGATTGATGGACATCTGTGTCTATCAGCAATTTGTTCTTTCTTaGTATGTGAGAGGATGCTGGGTGGTATTCCACTCTTCAGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LRLMDICVYQQFVLS*YVRGCWVVFHSSEE Trigger: TTCCTCTGAAGAGTGGAATACCACCCAGCATCCTCTCACATACAAAGAAAGAACAAATTGCTGATAGACACAGATGTCCATCAATCTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000470465.1 |
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| CDS CAA 90 bp | TTTATTTCTCACATTCTTGGGGCTGGAAGTCCAATATCAAGGTGCTaGCAGGTTTGGTTTCTCCTTTTTCAGAAAGAATCCTCCCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: FISHILGAGSPISRC*QVWFLLFQKESSLL Trigger: AAGAAGGGAGGATTCTTTCTGAAAAAGGAGAAACCAAACCTGCAAGCACCTTGATATTGGACTTCCAGCCCCAAGAATGTGAGAAATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652962.1 |
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| CDS CAA 90 bp | GTAGCATCAGTAACTGCAGACATCAAATCTGCCAGAGACTTCATCTaGGACTTCTCAGCTCTCAGATCGCAAAGATCCAATATTATTATG | + |
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Preference number: 6 (lower is better) Translates to: VASVTADIKSARDFI*DFSALRSQRSNIIM Trigger: CATAATAATATTGGATCTTTGCGATCTGAGAGCTGAGAAGTCCAAGATGAAGTCTCTGGCAGATTTGATGTCTGCAGTTACTGATGCTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655186.1 ENST00000666833.1 |
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| CDS GCA 72 bp | TTATGCTGCATATTTTATAGGCTCTTGACAACTGTTTaGATAGTCGACCAGCTCAATTCTTCCAGAGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LCCIFYRLLTTV*IVDQLNSSRGF Trigger: GAAACCTCTGGAAGAATTGAGCTGGTCGACTATGCAAACAGTTGTCAAGAGCCTATAAAATATGCAGCATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000462219.6 ENST00000470465.1 ENST00000651942.1 ENST00000660677.1 ENST00000665486.1 ENST00000665609.1 ENST00000665896.1 ENST00000668600.1 |
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| CDS GCA 72 bp | CTTGGCTTCATAAAGGAATATTGTAGCATCAGTAACTaGAGACATCAAATCTGCCAGAGACTTCATCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: LGFIKEYCSISN*RHQICQRLHLG Trigger: TCCAAGATGAAGTCTCTGGCAGATTTGATGTCTGCAGTTACTGATGCTACAATATTCCTTTATGAAGCCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655186.1 ENST00000666833.1 |
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| CDS CAA 90 bp | TTGAGATTGATGGACATCTGTGTCTATCAGCAATTTGTTCTTTCTTaGTATGTGAGAGGATGCTGGGTGGTATTCCACTCTATAGGTATA | + |
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Preference number: 6 (lower is better) Translates to: LRLMDICVYQQFVLS*YVRGCWVVFHSIGI Trigger: TATACCTATAGAGTGGAATACCACCCAGCATCCTCTCACATACAAAGAAAGAACAAATTGCTGATAGACACAGATGTCCATCAATCTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000462219.6 ENST00000651942.1 ENST00000652962.1 ENST00000660677.1 ENST00000665486.1 ENST00000665609.1 ENST00000665896.1 ENST00000668600.1 |
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| CDS CAA 90 bp | CCTAGACAATACCATATTAAGACCATTCTGGTGAATTCAAATATCTaGGGTAAGGACCATAAAGGCAACAAATGCGGGTCATGCATATAC | + |
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Preference number: 6 (lower is better) Translates to: PRQYHIKTILVNSNI*GKDHKGNKCGSCIY Trigger: GTATATGCATGACCCGCATTTGTTGCCTTTATGGTCCTTACCCAAGATATTTGAATTCACCAGAATGGTCTTAATATGGTATTGTCTAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668600.1 |
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| CDS GCA 72 bp | TATCAGCAATTTGTTCTTTCTTTGTATGTGAGAGGATaGTGGGTGGTATTCCACTCTATAGGTATAGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: YQQFVLSLYVRG*WVVFHSIGIGN Trigger: ATTCCCTATACCTATAGAGTGGAATACCACCCAGCATCCTCTCACATACAAAGAAAGAACAAATTGCTGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000462219.6 ENST00000651942.1 ENST00000652962.1 ENST00000660677.1 ENST00000665486.1 ENST00000665609.1 ENST00000665896.1 ENST00000668600.1 |
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| CDS CCA 72 bp | CAGCAATTTGTTCTTTCTTTGTATGTGAGAGGATGCTaGGTGGTATTCCACTCTATAGGTATAGGGAATATT | + |
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Preference number: 6 (lower is better) Translates to: QQFVLSLYVRGC*VVFHSIGIGNI Trigger: AATATTCCCTATACCTATAGAGTGGAATACCACCCAGCATCCTCTCACATACAAAGAAAGAACAAATTGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000462219.6 ENST00000651942.1 ENST00000652962.1 ENST00000660677.1 ENST00000665486.1 ENST00000665609.1 ENST00000665896.1 ENST00000668600.1 |
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| CDS CCA 72 bp | TTGTCCTTCATTTATTTACATAAGGAGTCCACAAACTaGCATCACCAATACAGCGCACTCTCATACTTAATG | + |
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Preference number: 6 (lower is better) Translates to: LSFIYLHKESTN*HHQYSALSYLM Trigger: CATTAAGTATGAGAGTGCGCTGTATTGGTGATGCCAGTTTGTGGACTCCTTATGTAAATAAATGAAGGACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000652877.1 ENST00000656113.1 ENST00000658118.1 ENST00000664338.1 ENST00000664608.1 ENST00000665152.1 ENST00000668707.1 ENST00000670450.1 ENST00000671623.1 |
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| CDS CAA 90 bp | ATAGTTTCAGTTGTAACCTGGTTTGGTCAAAATGAAATGTGCCTATaGAAAATTGGTGGGAAATTAACCTGGACAGTTAAGCTAGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: IVSVVTWFGQNEMCL*KIGGKLTWTVKLGQ Trigger: CTGACCTAGCTTAACTGTCCAGGTTAATTTCCCACCAATTTTCAATAGGCACATTTCATTTTGACCAAACCAGGTTACAACTGAAACTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000656113.1 ENST00000657523.1 ENST00000660749.2 ENST00000661499.1 |
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| CDS TCA 72 bp | TCTAACTGTGGGAAAGTTGATATGTCTGATACCCCATaGGTCAATCATTCCACTAATATGTTCAGTTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SNCGKVDMSDTP*VNHSTNMFSFS Trigger: GGAAAAACTGAACATATTAGTGGAATGATTGACTCATGGGGTATCAGACATATCAACTTTCCCACAGTTAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000654445.1 ENST00000660591.1 |
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| CDS TCA 72 bp | CCAGGTACTTACAATACCATATTAAGACCATTCTGGTaGATTCAAATATCTTGGGTAAGGACCATAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: PGTYNTILRPFW*IQISWVRTIKA Trigger: TGCCTTTATGGTCCTTACCCAAGATATTTGAATTCACCAGAATGGTCTTAATATGGTATTGTAAGTACCTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000652877.1 ENST00000656113.1 ENST00000658118.1 ENST00000664338.1 ENST00000664608.1 ENST00000665152.1 ENST00000668707.1 ENST00000670450.1 ENST00000671623.1 |
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| CDS TCA 72 bp | CATAAACTACAAGTAACCAAGATGTCCTTCCACAGATaGATGGATAAACAAACTGTGGTACCTGTACCATTT | + |
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Preference number: 6 (lower is better) Translates to: HKLQVTKMSFHR*MDKQTVVPVPF Trigger: AAATGGTACAGGTACCACAGTTTGTTTATCCATTCATCTGTGGAAGGACATCTTGGTTACTTGTAGTTTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000656093.1 ENST00000656651.1 ENST00000660887.1 ENST00000663137.1 |
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| CDS CAA 90 bp | TACTTACAATACCATATTAAGACCATTCTGGTGAATTCAAATATCTaGGGTAAGGACCATAAAGGCAACAAATGCGGGTCATGCATATAC | + |
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Preference number: 6 (lower is better) Translates to: YLQYHIKTILVNSNI*GKDHKGNKCGSCIY Trigger: GTATATGCATGACCCGCATTTGTTGCCTTTATGGTCCTTACCCAAGATATTTGAATTCACCAGAATGGTCTTAATATGGTATTGTAAGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000652877.1 ENST00000656113.1 ENST00000658118.1 ENST00000664338.1 ENST00000664608.1 ENST00000665152.1 ENST00000668707.1 ENST00000670450.1 ENST00000671623.1 |
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| CDS TCA 72 bp | GTATTCTGCTCTTTTGTATTTCGAAGTCAAATATACTaGTCTTGCATGTTTTGCTATATGGCCTTAAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: VFCSFVFRSQIY*SCMFCYMALSK Trigger: CTTGCTTAAGGCCATATAGCAAAACATGCAAGATCAGTATATTTGACTTCGAAATACAAAAGAGCAGAATAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659054.2 |
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| CDS TCA 72 bp | ATTAACCTAGACAATACCATATTAAGACCATTCTGGTaGATTCAAATATCTTGGGTAAGGACCATAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: INLDNTILRPFW*IQISWVRTIKA Trigger: TGCCTTTATGGTCCTTACCCAAGATATTTGAATTCACCAGAATGGTCTTAATATGGTATTGTCTAGGTTAAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668600.1 |
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