Pregenerated sensors for LINC00868 (Homo sapiens)
Ensembl gene IDs: ENSG00000267535Ensembl transcript IDs: ENST00000589708.1, ENST00000589914.1, ENST00000592919.1, ENST00000664044.1, ENST00000670268.1
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACCTCCCCACCGCCTTCCTCCTGCTCCTGCCACGAAGCCGCTGCCTaGTTCCTCTTTGCCTTCCGCTGTGACTGTAAGTTTCCTGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: TSPPPSSCSCHEAAA*FLFAFRCDCKFPEA Trigger: GGCCTCAGGAAACTTACAGTCACAGCGGAAGGCAAAGAGGAAGCAGGCAGCGGCTTCGTGGCAGGAGCAGGAGGAAGGCGGTGGGGAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000589708.1 ENST00000589914.1 ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS TCA 90 bp | GGGACCACTCCGACATGTAGGGGCTGCCCTCCAAGCTCCCTGTCCTaGGTTGTCCAAACTTCTGTCTGCCTCAGGGCTGCTGGCTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: GTTPTCRGCPPSSLS*VVQTSVCLRAAGCP Trigger: TGGACAGCCAGCAGCCCTGAGGCAGACAGAAGTTTGGACAACTCAGGACAGGGAGCTTGGAGGGCAGCCCCTACATGTCGGAGTGGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS TCA 90 bp | GTCCTTGGCCGGCCGAGCTCAACAGCCTTGGGCGGTAGGATGTCCTaGCTGTCCTTAGCGGCTCTTGCCTTGAAGGAAGAGTTGAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: VLGRPSSTALGGRMS*LSLAALALKEELRQ Trigger: TTGCCTCAACTCTTCCTTCAAGGCAAGAGCCGCTAAGGACAGTCAGGACATCCTACCGCCCAAGGCTGTTGAGCTCGGCCGGCCAAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000592919.1 ENST00000670268.1 |
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| CDS TCA 90 bp | TCCCTTGGCCGGCCGAGCTCAACAGCCTTGGGCGGTAGGATGTCCTaGCTGTCCTTAGCGGCTCTTGCCTTGAAGGAAGAGTTGAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: SLGRPSSTALGGRMS*LSLAALALKEELRQ Trigger: TTGCCTCAACTCTTCCTTCAAGGCAAGAGCCGCTAAGGACAGTCAGGACATCCTACCGCCCAAGGCTGTTGAGCTCGGCCGGCCAAGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664044.1 |
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| CDS GCA 90 bp | TCCAGTTGTTTAAAAGTATGTAGCACCTCCCCACCGCCTTCCTCCTaGTCCTGCCACGAAGCCGCTGCCTGCTTCCTCTTTGCCTTCCGC | + |
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Preference number: 5 (lower is better) Translates to: SSCLKVCSTSPPPSS*SCHEAAACFLFAFR Trigger: GCGGAAGGCAAAGAGGAAGCAGGCAGCGGCTTCGTGGCAGGAGCAGGAGGAAGGCGGTGGGGAGGTGCTACATACTTTTAAACAACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000589708.1 ENST00000589914.1 ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS GCA 90 bp | ACCACTTGCGCATGGTTGAGAAAAAGGTCATCGCCTCACACTGAGTaGGTGGTCAGCTCGCGCTGCGGTAACAGATCAAAGACCAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: TTCAWLRKRSSPHTE*VVSSRCGNRSKTRG Trigger: GCCCCTGGTCTTTGATCTGTTACCGCAGCGCGAGCTGACCACGCACTCAGTGTGAGGCGATGACCTTTTTCTCAACCATGCGCAAGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS GCA 90 bp | AAACTTCTGTCTGCCTCAGGGCTGCTGGCTGTCCAGGGACCCGGATaGTCAGCATCATTCTCTTCCAAAAGGCCCCTCCTTGGTTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: KLLSASGLLAVQGPG*SASFSSKRPLLGFL Trigger: CAGGAAACCAAGGAGGGGCCTTTTGGAAGAGAATGATGCTGAGCATCCGGGTCCCTGGACAGCCAGCAGCCCTGAGGCAGACAGAAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS CCA 90 bp | CTCCCTGTCCTGAGTTGTCCAAACTTCTGTCTGCCTCAGGGCTGCTaGCTGTCCAGGGACCCGGATGCTCAGCATCATTCTCTTCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: LPVLSCPNFCLPQGC*LSRDPDAQHHSLPK Trigger: TTTTGGAAGAGAATGATGCTGAGCATCCGGGTCCCTGGACAGCCAGCAGCCCTGAGGCAGACAGAAGTTTGGACAACTCAGGACAGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS GCA 90 bp | CTCCCCAGCCATCCTTCCTGTAGTCTCCAAATTGAAGATCGCACCTaGGGACTTCTCATGGGGCCTGACACAGAGCTGGCTTCTGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: LPSHPSCSLQIEDRT*GLLMGPDTELASVC Trigger: ACAAACAGAAGCCAGCTCTGTGTCAGGCCCCATGAGAAGTCCGCAGGTGCGATCTTCAATTTGGAGACTACAGGAAGGATGGCTGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000589914.1 ENST00000664044.1 |
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| CDS GCA 90 bp | AGAAAAAGGTCATCGCCTCACACTGAGTGCGTGGTCAGCTCGCGCTaGGGTAACAGATCAAAGACCAGGGGCTTAAACAATGGGCATCGC | + |
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Preference number: 5 (lower is better) Translates to: RKRSSPHTECVVSSR*GNRSKTRGLNNGHR Trigger: GCGATGCCCATTGTTTAAGCCCCTGGTCTTTGATCTGTTACCGCAGCGCGAGCTGACCACGCACTCAGTGTGAGGCGATGACCTTTTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS CCA 90 bp | ATCTCATGTCGAATTGTAATCCCCACTGTTGGAGGAGGAGCCTGGTaGGAGGTGACTGGATCAGGGCGCAGAATTCCCCCTTGCTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: ISCRIVIPTVGGGAW*EVTGSGRRIPPCCS Trigger: AGAACAGCAAGGGGGAATTCTGCGCCCTGATCCAGTCACCTCCCACCAGGCTCCTCCTCCAACAGTGGGGATTACAATTCGACATGAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000589708.1 ENST00000589914.1 ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS CCA 90 bp | CTTCCTGTAGTCTCCAAATTGAAGATCGCACCTGCGGACTTCTCATaGGGCCTGACACAGAGCTGGCTTCTGTTTGTGGCTTATGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: LPVVSKLKIAPADFS*GLTQSWLLFVAYVS Trigger: AGACACATAAGCCACAAACAGAAGCCAGCTCTGTGTCAGGCCCCATGAGAAGTCCGCAGGTGCGATCTTCAATTTGGAGACTACAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589914.1 ENST00000664044.1 |
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| CDS CCA 90 bp | ATCCGGCCTGTGATATTTGAAGCACGCAGAAATACCACTTGCGCATaGTTGAGAAAAAGGTCATCGCCTCACACTGAGTGCGTGGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: IRPVIFEARRNTTCA*LRKRSSPHTECVVS Trigger: GCTGACCACGCACTCAGTGTGAGGCGATGACCTTTTTCTCAACCATGCGCAAGTGGTATTTCTGCGTGCTTCAAATATCACAGGCCGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS GCA 90 bp | CTGACAATCCGGCCTGTGATATTTGAAGCACGCAGAAATACCACTTaGGCATGGTTGAGAAAAAGGTCATCGCCTCACACTGAGTGCGTG | + |
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Preference number: 5 (lower is better) Translates to: LTIRPVIFEARRNTT*AWLRKRSSPHTECV Trigger: CACGCACTCAGTGTGAGGCGATGACCTTTTTCTCAACCATGCGCAAGTGGTATTTCTGCGTGCTTCAAATATCACAGGCCGGATTGTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS GCA 90 bp | ATGTTCAATGTTAGTCAGCTTTTCCTCCAAATTGAAGATCGCACCTaGGGACTTCTCATGGGGCCTGACACAGAGCTGGCTTCTGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: MFNVSQLFLQIEDRT*GLLMGPDTELASVC Trigger: ACAAACAGAAGCCAGCTCTGTGTCAGGCCCCATGAGAAGTCCGCAGGTGCGATCTTCAATTTGGAGGAAAAGCTGACTAACATTGAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589708.1 |
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| CDS CAA 90 bp | CCACTCCGACATGTAGGGGCTGCCCTCCAAGCTCCCTGTCCTGAGTaGTCCAAACTTCTGTCTGCCTCAGGGCTGCTGGCTGTCCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: PLRHVGAALQAPCPE*SKLLSASGLLAVQG Trigger: TCCCTGGACAGCCAGCAGCCCTGAGGCAGACAGAAGTTTGGACAACTCAGGACAGGGAGCTTGGAGGGCAGCCCCTACATGTCGGAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS TCA 72 bp | CGGCCGAGCTCAACAGCCTTGGGCGGTAGGATGTCCTaGCTGTCCTTAGCGGCTCTTGCCTTGAAGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: RPSSTALGGRMS*LSLAALALKEE Trigger: CTCTTCCTTCAAGGCAAGAGCCGCTAAGGACAGTCAGGACATCCTACCGCCCAAGGCTGTTGAGCTCGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS GCA 72 bp | TCTGCCTCAGGGCTGCTGGCTGTCCAGGGACCCGGATaGTCAGCATCATTCTCTTCCAAAAGGCCCCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SASGLLAVQGPG*SASFSSKRPLL Trigger: AAGGAGGGGCCTTTTGGAAGAGAATGATGCTGAGCATCCGGGTCCCTGGACAGCCAGCAGCCCTGAGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS CCA 72 bp | CGAATTGTAATCCCCACTGTTGGAGGAGGAGCCTGGTaGGAGGTGACTGGATCAGGGCGCAGAATTCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: RIVIPTVGGGAW*EVTGSGRRIPP Trigger: AGGGGGAATTCTGCGCCCTGATCCAGTCACCTCCCACCAGGCTCCTCCTCCAACAGTGGGGATTACAATTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000589708.1 ENST00000589914.1 ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS CAA 72 bp | GAGGCCTCCCCAGCCATCCTTCCTGTAGTCTCCAAATaGAAGATCGCACCTGCGGACTTCTCATGGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: EASPAILPVVSK*KIAPADFSWGL Trigger: CAGGCCCCATGAGAAGTCCGCAGGTGCGATCTTCAATTTGGAGACTACAGGAAGGATGGCTGGGGAGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000589914.1 ENST00000664044.1 |
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| CDS CCA 72 bp | CTGAGTTGTCCAAACTTCTGTCTGCCTCAGGGCTGCTaGCTGTCCAGGGACCCGGATGCTCAGCATCATTCT | + |
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Preference number: 6 (lower is better) Translates to: LSCPNFCLPQGC*LSRDPDAQHHS Trigger: AGAATGATGCTGAGCATCCGGGTCCCTGGACAGCCAGCAGCCCTGAGGCAGACAGAAGTTTGGACAACTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS CAA 72 bp | CACAGGTCTGGCAGCCGCAAGCCCAGGATCAAGGTGTaGGCGGATCTGAAGGCTACTGAACGATTGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: HRSGSRKPRIKV*ADLKATERLSS Trigger: GGAAGACAATCGTTCAGTAGCCTTCAGATCCGCCAACACCTTGATCCTGGGCTTGCGGCTGCCAGACCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS CAA 90 bp | AAGTTTCCTGAGGCCTCCCCAGCCATCCTTCCTGTAGTCTCCAAATaGAAGATCGCACCTGCGGACTTCTCATGGGGCCTGACACAGAGC | + |
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Preference number: 6 (lower is better) Translates to: KFPEASPAILPVVSK*KIAPADFSWGLTQS Trigger: GCTCTGTGTCAGGCCCCATGAGAAGTCCGCAGGTGCGATCTTCAATTTGGAGACTACAGGAAGGATGGCTGGGGAGGCCTCAGGAAACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000589914.1 ENST00000664044.1 |
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| CDS CAA 72 bp | CGATTGTCTTCCTGGCTTGTAGGCGGCCTCTCCTTGTaGTATCCTTACTGGTGGAGAGCGGAGCGGAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: RLSSWLVGGLSL*YPYWWRAERKQ Trigger: TTGCTTCCGCTCCGCTCTCCACCAGTAAGGATACAACAAGGAGAGGCCGCCTACAAGCCAGGAAGACAATCG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664044.1 ENST00000670268.1 |
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| CDS CAA 72 bp | GAACGATTGTCTTCCTGGCTTGTAGGCGGCCTCTCCTaGTTGTATCCTTACTGGTGGAGAGCGGAGCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: ERLSSWLVGGLS*LYPYWWRAERK Trigger: CTTCCGCTCCGCTCTCCACCAGTAAGGATACAACAAGGAGAGGCCGCCTACAAGCCAGGAAGACAATCGTTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000664044.1 ENST00000670268.1 |
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| CDS GCA 72 bp | CATCCTTCCTGTAGTCTCCAAATTGAAGATCGCACCTaGGGACTTCTCATGGGGCCTGACACAGAGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: HPSCSLQIEDRT*GLLMGPDTELA Trigger: AGCCAGCTCTGTGTCAGGCCCCATGAGAAGTCCGCAGGTGCGATCTTCAATTTGGAGACTACAGGAAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589914.1 ENST00000664044.1 |
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| CDS GCA 72 bp | TCATCGCCTCACACTGAGTGCGTGGTCAGCTCGCGCTaGGGTAACAGATCAAAGACCAGGGGCTTAAACAAT | + |
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Preference number: 6 (lower is better) Translates to: SSPHTECVVSSR*GNRSKTRGLNN Trigger: ATTGTTTAAGCCCCTGGTCTTTGATCTGTTACCGCAGCGCGAGCTGACCACGCACTCAGTGTGAGGCGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS GCA 72 bp | GCATGGTTGAGAAAAAGGTCATCGCCTCACACTGAGTaGGTGGTCAGCTCGCGCTGCGGTAACAGATCAAAG | + |
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Preference number: 6 (lower is better) Translates to: AWLRKRSSPHTE*VVSSRCGNRSK Trigger: CTTTGATCTGTTACCGCAGCGCGAGCTGACCACGCACTCAGTGTGAGGCGATGACCTTTTTCTCAACCATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS GCA 72 bp | GTTAGTCAGCTTTTCCTCCAAATTGAAGATCGCACCTaGGGACTTCTCATGGGGCCTGACACAGAGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: VSQLFLQIEDRT*GLLMGPDTELA Trigger: AGCCAGCTCTGTGTCAGGCCCCATGAGAAGTCCGCAGGTGCGATCTTCAATTTGGAGGAAAAGCTGACTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589708.1 |
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| CDS GCA 72 bp | TGGGAGGTGACTGGATCAGGGCGCAGAATTCCCCCTTaGTGTTCTCGTGATAGTGAGTTCTCACAAGATCCA | + |
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Preference number: 6 (lower is better) Translates to: WEVTGSGRRIPP*CSRDSEFSQDP Trigger: TGGATCTTGTGAGAACTCACTATCACGAGAACAGCAAGGGGGAATTCTGCGCCCTGATCCAGTCACCTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000589708.1 ENST00000589914.1 ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS CAA 90 bp | CGGCCTGTGATATTTGAAGCACGCAGAAATACCACTTGCGCATGGTaGAGAAAAAGGTCATCGCCTCACACTGAGTGCGTGGTCAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: RPVIFEARRNTTCAW*RKRSSPHTECVVSS Trigger: CGAGCTGACCACGCACTCAGTGTGAGGCGATGACCTTTTTCTCAACCATGCGCAAGTGGTATTTCTGCGTGCTTCAAATATCACAGGCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS TCA 72 bp | CCTCCTTGGTTTCCTGACAATCCGGCCTGTGATATTTaGAGCACGCAGAAATACCACTTGCGCATGGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: PPWFPDNPACDI*STQKYHLRMVE Trigger: CTCAACCATGCGCAAGTGGTATTTCTGCGTGCTTCAAATATCACAGGCCGGATTGTCAGGAAACCAAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS CCA 72 bp | GCACCTGCGGACTTCTCATGGGGCCTGACACAGAGCTaGCTTCTGTTTGTGGCTTATGTGTCTACTAAATTA | + |
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Preference number: 6 (lower is better) Translates to: APADFSWGLTQS*LLFVAYVSTKL Trigger: TAATTTAGTAGACACATAAGCCACAAACAGAAGCCAGCTCTGTGTCAGGCCCCATGAGAAGTCCGCAGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000589708.1 ENST00000589914.1 ENST00000664044.1 |
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| CDS CAA 72 bp | TTACTGGTGGAGAGCGGAGCGGAAGCAAGCTCTCTCTaGTCTTTTTATAGGGGCTTTCATCCATCTACACGG | + |
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Preference number: 6 (lower is better) Translates to: LLVESGAEASSL*SFYRGFHPSTR Trigger: CCGTGTAGATGGATGAAAGCCCCTATAAAAAGACAAGAGAGAGCTTGCTTCCGCTCCGCTCTCCACCAGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000664044.1 ENST00000670268.1 |
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| CDS TCA 72 bp | TATTTGAAGCACGCAGAAATACCACTTGCGCATGGTTaGGAAAAAGGTCATCGCCTCACACTGAGTGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: YLKHAEIPLAHG*EKGHRLTLSAW Trigger: CCACGCACTCAGTGTGAGGCGATGACCTTTTTCTCAACCATGCGCAAGTGGTATTTCTGCGTGCTTCAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS GCA 72 bp | CGGCCTGTGATATTTGAAGCACGCAGAAATACCACTTaGGCATGGTTGAGAAAAAGGTCATCGCCTCACACT | + |
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Preference number: 6 (lower is better) Translates to: RPVIFEARRNTT*AWLRKRSSPHT Trigger: AGTGTGAGGCGATGACCTTTTTCTCAACCATGCGCAAGTGGTATTTCTGCGTGCTTCAAATATCACAGGCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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| CDS CAA 72 bp | ATATTTGAAGCACGCAGAAATACCACTTGCGCATGGTaGAGAAAAAGGTCATCGCCTCACACTGAGTGCGTG | + |
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Preference number: 6 (lower is better) Translates to: IFEARRNTTCAW*RKRSSPHTECV Trigger: CACGCACTCAGTGTGAGGCGATGACCTTTTTCTCAACCATGCGCAAGTGGTATTTCTGCGTGCTTCAAATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000592919.1 ENST00000664044.1 ENST00000670268.1 |
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