Pregenerated sensors for LINC00867 (Homo sapiens)
Ensembl gene IDs: ENSG00000232139Ensembl transcript IDs: ENST00000411666.6, ENST00000415417.6, ENST00000445161.5, ENST00000453236.2, ENST00000657224.1, ENST00000664512.1, ENST00000668223.1, ENST00000670629.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTTCTGTGCCCGGGAGGGGCTTCTCTCTCTTTTGGGATTGGAGTGTaGCATTGCCGCCAGAAAGCCTGCAGAATTCCGGGTTGTGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: VLCPGGASLSFGIGV*HCRQKACRIPGCAA Trigger: GGCTGCACAACCCGGAATTCTGCAGGCTTTCTGGCGGCAATGCCACACTCCAATCCCAAAAGAGAGAGAAGCCCCTCCCGGGCACAGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664512.1 |
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| CDS TCA 90 bp | CAATGTTGCACCTTTACGGTGGCTGGAGTGAGCCCATCTGGGTGCTaGTCAGGCCGATGCAGGCTATGTGTGACGGGAGGGTCAGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: QCCTFTVAGVSPSGC*SGRCRLCVTGGSEL Trigger: AAGCTCTGACCCTCCCGTCACACATAGCCTGCATCGGCCTGATCAGCACCCAGATGGGCTCACTCCAGCCACCGTAAAGGTGCAACATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668223.1 |
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| CDS CCA 90 bp | GCGCTTAGTTCTGTGCCCGGGAGGGGCTTCTCTCTCTTTTGGGATTaGAGTGTGGCATTGCCGCCAGAAAGCCTGCAGAATTCCGGGTTG | + |
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Preference number: 5 (lower is better) Translates to: ALSSVPGRGFSLFWD*SVALPPESLQNSGL Trigger: CAACCCGGAATTCTGCAGGCTTTCTGGCGGCAATGCCACACTCCAATCCCAAAAGAGAGAGAAGCCCCTCCCGGGCACAGAACTAAGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664512.1 |
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| CDS GCA 90 bp | AGCAGGCTAGACATCCTTCGCCGGAATGTGCAGCGCTTAGTTCTGTaGCCGGGAGGGGCTTCTCTCTCTTTTGGGATTGGAGTGTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: SRLDILRRNVQRLVL*PGGASLSFGIGVWH Trigger: ATGCCACACTCCAATCCCAAAAGAGAGAGAAGCCCCTCCCGGGCACAGAACTAAGCGCTGCACATTCCGGCGAAGGATGTCTAGCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664512.1 |
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| CDS CCA 90 bp | TGTGCAGCGCTTAGTTCTGTGCCCGGGAGGGGCTTCTCTCTCTTTTaGGATTGGAGTGTGGCATTGCCGCCAGAAAGCCTGCAGAATTCC | + |
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Preference number: 5 (lower is better) Translates to: CAALSSVPGRGFSLF*DWSVALPPESLQNS Trigger: GGAATTCTGCAGGCTTTCTGGCGGCAATGCCACACTCCAATCCCAAAAGAGAGAGAAGCCCCTCCCGGGCACAGAACTAAGCGCTGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664512.1 |
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| CDS CCA 90 bp | TTGTTTGCAATGTTGCACCTTTACGGTGGCTGGAGTGAGCCCATCTaGGTGCTGATCAGGCCGATGCAGGCTATGTGTGACGGGAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: LFAMLHLYGGWSEPI*VLIRPMQAMCDGRV Trigger: GACCCTCCCGTCACACATAGCCTGCATCGGCCTGATCAGCACCCAGATGGGCTCACTCCAGCCACCGTAAAGGTGCAACATTGCAAACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668223.1 |
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| CDS GCA 90 bp | TGGAGTGTGGCATTGCCGCCAGAAAGCCTGCAGAATTCCGGGTTGTaGAGCCAAGCAGGAACGGTGTACCTTTCTAGACCCATCCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: WSVALPPESLQNSGL*SQAGTVYLSRPILL Trigger: CAAGAGGATGGGTCTAGAAAGGTACACCGTTCCTGCTTGGCTGCACAACCCGGAATTCTGCAGGCTTTCTGGCGGCAATGCCACACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664512.1 |
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| CDS CCA 90 bp | TTTGGATGCACATTCCTGGGTCACGTGCCCTCAGGTCTGTGGCACTaGGGGAGAGAATTCATCGCTGATGGGCAGGTCTTTCTTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: FGCTFLGHVPSGLWH*GREFIADGQVFLSL Trigger: CAAGGAAAGAAAGACCTGCCCATCAGCGATGAATTCTCTCCCCCAGTGCCACAGACCTGAGGGCACGTGACCCAGGAATGTGCATCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000445161.5 ENST00000453236.2 ENST00000668223.1 ENST00000670629.1 |
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| CDS GCA 90 bp | TCTGGAGCTGGTGGGCCTTTCCTGGGTCACTGCCTCTTCTTGCCTTaGTGTTTTCTTCCACATCTGATAGGCAGTGCCTGCAAAAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: SGAGGPFLGHCLFLP*CFLPHLIGSACKKL Trigger: AAGCTTTTTGCAGGCACTGCCTATCAGATGTGGAAGAAAACAGCAAGGCAAGAAGAGGCAGTGACCCAGGAAAGGCCCACCAGCTCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668223.1 |
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| CDS CCA 90 bp | CTGATGGGCAGGTCTTTCTTTCCTTGGGGCCCTTCATTAGCTCTGTaGCCTGTATTCCTGAGGGTTATTTGTGCCACACCCCTTTACCCA | + |
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Preference number: 5 (lower is better) Translates to: LMGRSFFPWGPSLAL*PVFLRVICATPLYP Trigger: TGGGTAAAGGGGTGTGGCACAAATAACCCTCAGGAATACAGGCCACAGAGCTAATGAAGGGCCCCAAGGAAAGAAAGACCTGCCCATCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000445161.5 ENST00000453236.2 ENST00000668223.1 ENST00000670629.1 |
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| CDS CCA 90 bp | ATTATCTTTGGATGCACATTCCTGGGTCACGTGCCCTCAGGTCTGTaGCACTGGGGGAGAGAATTCATCGCTGATGGGCAGGTCTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: IIFGCTFLGHVPSGL*HWGREFIADGQVFL Trigger: AAGAAAGACCTGCCCATCAGCGATGAATTCTCTCCCCCAGTGCCACAGACCTGAGGGCACGTGACCCAGGAATGTGCATCCAAAGATAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000445161.5 ENST00000453236.2 ENST00000668223.1 ENST00000670629.1 |
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| CDS CCA 90 bp | ACTGGGGGAGAGAATTCATCGCTGATGGGCAGGTCTTTCTTTCCTTaGGGCCCTTCATTAGCTCTGTGGCCTGTATTCCTGAGGGTTATT | + |
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Preference number: 5 (lower is better) Translates to: TGGENSSLMGRSFFP*GPSLALWPVFLRVI Trigger: AATAACCCTCAGGAATACAGGCCACAGAGCTAATGAAGGGCCCCAAGGAAAGAAAGACCTGCCCATCAGCGATGAATTCTCTCCCCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000445161.5 ENST00000453236.2 ENST00000668223.1 ENST00000670629.1 |
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| CDS CCA 90 bp | GCAAAAAGCTTTGGGTTCCTGTCCAAGGTCTCTCATGGAAGTGGTTaGAGGAACCCCAGTAGAGAGGCTGAGGCAGGTTGTTTGCAATGT | + |
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Preference number: 5 (lower is better) Translates to: AKSFGFLSKVSHGSG*RNPSREAEAGCLQC Trigger: ACATTGCAAACAACCTGCCTCAGCCTCTCTACTGGGGTTCCTCCAACCACTTCCATGAGAGACCTTGGACAGGAACCCAAAGCTTTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668223.1 |
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| CDS CCA 90 bp | AATGAGCAATCTCCGTATTGTGGAGTAGGCAACTTCTGGAGCTGGTaGGCCTTTCCTGGGTCACTGCCTCTTCTTGCCTTGCTGTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: NEQSPYCGVGNFWSW*AFPGSLPLLALLFS Trigger: AGAAAACAGCAAGGCAAGAAGAGGCAGTGACCCAGGAAAGGCCCACCAGCTCCAGAAGTTGCCTACTCCACAATACGGAGATTGCTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668223.1 |
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| CDS CCA 90 bp | TGCTGTTTTCTTCCACATCTGATAGGCAGTGCCTGCAAAAAGCTTTaGGTTCCTGTCCAAGGTCTCTCATGGAAGTGGTTGGAGGAACCC | + |
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Preference number: 5 (lower is better) Translates to: CCFLPHLIGSACKKL*VPVQGLSWKWLEEP Trigger: GGGTTCCTCCAACCACTTCCATGAGAGACCTTGGACAGGAACCCAAAGCTTTTTGCAGGCACTGCCTATCAGATGTGGAAGAAAACAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668223.1 |
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| CDS CCA 90 bp | CTTAAAAGAAATGAGCAATCTCCGTATTGTGGAGTAGGCAACTTCTaGAGCTGGTGGGCCTTTCCTGGGTCACTGCCTCTTCTTGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: LKRNEQSPYCGVGNF*SWWAFPGSLPLLAL Trigger: CAAGGCAAGAAGAGGCAGTGACCCAGGAAAGGCCCACCAGCTCCAGAAGTTGCCTACTCCACAATACGGAGATTGCTCATTTCTTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668223.1 |
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| CDS CCA 90 bp | TCAGCTTCCTTGGGAACTGTTGTCCAACTTCAGCACACAAAAGAGTaGCCTTTCTTCTCACAAGGAAAGAGCTCAATGAATTATGAATCT | + |
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Preference number: 5 (lower is better) Translates to: SASLGTVVQLQHTKE*PFFSQGKSSMNYES Trigger: AGATTCATAATTCATTGAGCTCTTTCCTTGTGAGAAGAAAGGCCACTCTTTTGTGTGCTGAAGTTGGACAACAGTTCCCAAGGAAGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000411666.6 ENST00000445161.5 ENST00000664512.1 ENST00000670629.1 |
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| CDS CCA 90 bp | TTCTCACAGCGGAATCGACTTAAAATGAGCCTTGAACTGTTAACTTaGTTTATTGTCTTTCCATGCAGGATCTTGGGTCTGGGAAAATGT | + |
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Preference number: 5 (lower is better) Translates to: FSQRNRLKMSLELLT*FIVFPCRILGLGKC Trigger: ACATTTTCCCAGACCCAAGATCCTGCATGGAAAGACAATAAACCAAGTTAACAGTTCAAGGCTCATTTTAAGTCGATTCCGCTGTGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664512.1 |
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| CDS GCA 90 bp | TGTCAATTTGTACAGCCACATTACACATGCAAATTGTGCTGCCTGTaGAAACACCACTTGGAGATGATAAAAACAAATTTACGAAGGCTA | + |
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Preference number: 5 (lower is better) Translates to: CQFVQPHYTCKLCCL*KHHLEMIKTNLRRL Trigger: TAGCCTTCGTAAATTTGTTTTTATCATCTCCAAGTGGTGTTTGCACAGGCAGCACAATTTGCATGTGTAATGTGGCTGTACAAATTGACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670629.1 |
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| CDS GCA 90 bp | TTTACTTGTTGTCAATTTGTACAGCCACATTACACATGCAAATTGTaGTGCCTGTGCAAACACCACTTGGAGATGATAAAAACAAATTTA | + |
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Preference number: 5 (lower is better) Translates to: FTCCQFVQPHYTCKL*CLCKHHLEMIKTNL Trigger: TAAATTTGTTTTTATCATCTCCAAGTGGTGTTTGCACAGGCAGCACAATTTGCATGTGTAATGTGGCTGTACAAATTGACAACAAGTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670629.1 |
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| CDS TCA 72 bp | ACCTTTACGGTGGCTGGAGTGAGCCCATCTGGGTGCTaGTCAGGCCGATGCAGGCTATGTGTGACGGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: TFTVAGVSPSGC*SGRCRLCVTGG Trigger: CCCTCCCGTCACACATAGCCTGCATCGGCCTGATCAGCACCCAGATGGGCTCACTCCAGCCACCGTAAAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668223.1 |
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| CDS CAA 90 bp | GTGCCCGGGAGGGGCTTCTCTCTCTTTTGGGATTGGAGTGTGGCATaGCCGCCAGAAAGCCTGCAGAATTCCGGGTTGTGCAGCCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: VPGRGFSLFWDWSVA*PPESLQNSGLCSQA Trigger: TGCTTGGCTGCACAACCCGGAATTCTGCAGGCTTTCTGGCGGCAATGCCACACTCCAATCCCAAAAGAGAGAGAAGCCCCTCCCGGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664512.1 |
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| CDS TCA 72 bp | CATCTGGGTGCTGATCAGGCCGATGCAGGCTATGTGTaGCGGGAGGGTCAGAGCTTAAGCAAAGCACTACCC | + |
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Preference number: 6 (lower is better) Translates to: HLGADQADAGYV*REGQSLSKALP Trigger: GGGTAGTGCTTTGCTTAAGCTCTGACCCTCCCGTCACACATAGCCTGCATCGGCCTGATCAGCACCCAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668223.1 |
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| CDS GCA 72 bp | GCATTGCCGCCAGAAAGCCTGCAGAATTCCGGGTTGTaGAGCCAAGCAGGAACGGTGTACCTTTCTAGACCC | + |
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Preference number: 6 (lower is better) Translates to: ALPPESLQNSGL*SQAGTVYLSRP Trigger: GGGTCTAGAAAGGTACACCGTTCCTGCTTGGCTGCACAACCCGGAATTCTGCAGGCTTTCTGGCGGCAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664512.1 |
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| CDS GCA 72 bp | CCCAGTAGAGAGGCTGAGGCAGGTTGTTTGCAATGTTaGACCTTTACGGTGGCTGGAGTGAGCCCATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PSREAEAGCLQC*TFTVAGVSPSG Trigger: CCCAGATGGGCTCACTCCAGCCACCGTAAAGGTGCAACATTGCAAACAACCTGCCTCAGCCTCTCTACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668223.1 |
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| CDS CCA 72 bp | CTTAGTTCTGTGCCCGGGAGGGGCTTCTCTCTCTTTTaGGATTGGAGTGTGGCATTGCCGCCAGAAAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LSSVPGRGFSLF*DWSVALPPESL Trigger: CAGGCTTTCTGGCGGCAATGCCACACTCCAATCCCAAAAGAGAGAGAAGCCCCTCCCGGGCACAGAACTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664512.1 |
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| CDS CCA 72 bp | GGCAGGTTGTTTGCAATGTTGCACCTTTACGGTGGCTaGAGTGAGCCCATCTGGGTGCTGATCAGGCCGATG | + |
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Preference number: 6 (lower is better) Translates to: GRLFAMLHLYGG*SEPIWVLIRPM Trigger: CATCGGCCTGATCAGCACCCAGATGGGCTCACTCCAGCCACCGTAAAGGTGCAACATTGCAAACAACCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668223.1 |
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| CDS CAA 72 bp | GTGGCATTGCCGCCAGAAAGCCTGCAGAATTCCGGGTaGTGCAGCCAAGCAGGAACGGTGTACCTTTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: VALPPESLQNSG*CSQAGTVYLSR Trigger: TCTAGAAAGGTACACCGTTCCTGCTTGGCTGCACAACCCGGAATTCTGCAGGCTTTCTGGCGGCAATGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664512.1 |
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| CDS CAA 72 bp | AGGGGCTTCTCTCTCTTTTGGGATTGGAGTGTGGCATaGCCGCCAGAAAGCCTGCAGAATTCCGGGTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: RGFSLFWDWSVA*PPESLQNSGLC Trigger: GCACAACCCGGAATTCTGCAGGCTTTCTGGCGGCAATGCCACACTCCAATCCCAAAAGAGAGAGAAGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664512.1 |
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| CDS CAA 72 bp | AGTGGATGGAGCCAGAGGCCGAGACACCCACCATTCTaGGAGGGCACCTGTCAGAATCCTGGTAGACCTATA | + |
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Preference number: 6 (lower is better) Translates to: SGWSQRPRHPPF*EGTCQNPGRPI Trigger: TATAGGTCTACCAGGATTCTGACAGGTGCCCTCCAAGAATGGTGGGTGTCTCGGCCTCTGGCTCCATCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668223.1 |
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| CDS CCA 72 bp | CTTAAGCAAAGCACTACCCAGCTAGATGTCCAGGAGTaGATGGAGCCAGAGGCCGAGACACCCACCATTCTT | + |
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Preference number: 6 (lower is better) Translates to: LKQSTTQLDVQE*MEPEAETPTIL Trigger: AAGAATGGTGGGTGTCTCGGCCTCTGGCTCCATCCACTCCTGGACATCTAGCTGGGTAGTGCTTTGCTTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668223.1 |
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| CDS CAA 90 bp | ATGTCCAGGAGTGGATGGAGCCAGAGGCCGAGACACCCACCATTCTaGGAGGGCACCTGTCAGAATCCTGGTAGACCTATAAGTAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: MSRSGWSQRPRHPPF*EGTCQNPGRPISRV Trigger: AACTCTACTTATAGGTCTACCAGGATTCTGACAGGTGCCCTCCAAGAATGGTGGGTGTCTCGGCCTCTGGCTCCATCCACTCCTGGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668223.1 |
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| CDS CAA 90 bp | CACTGGGGGAGAGAATTCATCGCTGATGGGCAGGTCTTTCTTTCCTaGGGGCCCTTCATTAGCTCTGTGGCCTGTATTCCTGAGGGTTAT | + |
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Preference number: 6 (lower is better) Translates to: HWGREFIADGQVFLS*GPFISSVACIPEGY Trigger: ATAACCCTCAGGAATACAGGCCACAGAGCTAATGAAGGGCCCCAAGGAAAGAAAGACCTGCCCATCAGCGATGAATTCTCTCCCCCAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000445161.5 ENST00000453236.2 ENST00000668223.1 ENST00000670629.1 |
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| CDS CAA 90 bp | TTCTGGAGCTGGTGGGCCTTTCCTGGGTCACTGCCTCTTCTTGCCTaGCTGTTTTCTTCCACATCTGATAGGCAGTGCCTGCAAAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: FWSWWAFPGSLPLLA*LFSSTSDRQCLQKA Trigger: AGCTTTTTGCAGGCACTGCCTATCAGATGTGGAAGAAAACAGCAAGGCAAGAAGAGGCAGTGACCCAGGAAAGGCCCACCAGCTCCAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668223.1 |
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| CDS CCA 72 bp | AGGTCTTTCTTTCCTTGGGGCCCTTCATTAGCTCTGTaGCCTGTATTCCTGAGGGTTATTTGTGCCACACCC | + |
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Preference number: 6 (lower is better) Translates to: RSFFPWGPSLAL*PVFLRVICATP Trigger: GGGTGTGGCACAAATAACCCTCAGGAATACAGGCCACAGAGCTAATGAAGGGCCCCAAGGAAAGAAAGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000445161.5 ENST00000453236.2 ENST00000668223.1 ENST00000670629.1 |
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| CDS CCA 72 bp | GAGAATTCATCGCTGATGGGCAGGTCTTTCTTTCCTTaGGGCCCTTCATTAGCTCTGTGGCCTGTATTCCTG | + |
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Preference number: 6 (lower is better) Translates to: ENSSLMGRSFFP*GPSLALWPVFL Trigger: CAGGAATACAGGCCACAGAGCTAATGAAGGGCCCCAAGGAAAGAAAGACCTGCCCATCAGCGATGAATTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000445161.5 ENST00000453236.2 ENST00000668223.1 ENST00000670629.1 |
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| CDS GCA 72 bp | GTAGTATTATCTTTGGATGCACATTCCTGGGTCACGTaGCCTCAGGTCTGTGGCACATCAACGATGGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: VVLSLDAHSWVT*PQVCGTSTMAD Trigger: ATCAGCCATCGTTGATGTGCCACAGACCTGAGGGCACGTGACCCAGGAATGTGCATCCAAAGATAATACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000411666.6 ENST00000415417.6 ENST00000664512.1 |
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| CDS CAA 72 bp | AGAGAATTCATCGCTGATGGGCAGGTCTTTCTTTCCTaGGGGCCCTTCATTAGCTCTGTGGCCTGTATTCCT | + |
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Preference number: 6 (lower is better) Translates to: REFIADGQVFLS*GPFISSVACIP Trigger: AGGAATACAGGCCACAGAGCTAATGAAGGGCCCCAAGGAAAGAAAGACCTGCCCATCAGCGATGAATTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000445161.5 ENST00000453236.2 ENST00000668223.1 ENST00000670629.1 |
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| CDS CAA 90 bp | TTGCTGTTTTCTTCCACATCTGATAGGCAGTGCCTGCAAAAAGCTTaGGGTTCCTGTCCAAGGTCTCTCATGGAAGTGGTTGGAGGAACC | + |
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Preference number: 6 (lower is better) Translates to: LLFSSTSDRQCLQKA*GSCPRSLMEVVGGT Trigger: GGTTCCTCCAACCACTTCCATGAGAGACCTTGGACAGGAACCCAAAGCTTTTTGCAGGCACTGCCTATCAGATGTGGAAGAAAACAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000668223.1 |
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| CDS TCA 72 bp | GTTAGAGTTGTCTTCCCAGAACTGAGAAATAGGCCGTaGATCCTGAAGGAAAAGCTCTCTGCCTCAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: VRVVFPELRNRP*ILKEKLSASAA Trigger: AGCAGCTGAGGCAGAGAGCTTTTCCTTCAGGATTCACGGCCTATTTCTCAGTTCTGGGAAGACAACTCTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000415417.6 ENST00000453236.2 ENST00000657224.1 |
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| CDS GCA 72 bp | AAGCAGGAACGGTGTACCTTTCTAGACCCATCCTCTTaGAATCTTGGACCCTGTAAGTATTCTCACAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: KQERCTFLDPSS*NLGPCKYSHSG Trigger: TCCGCTGTGAGAATACTTACAGGGTCCAAGATTGCAAGAGGATGGGTCTAGAAAGGTACACCGTTCCTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664512.1 |
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| CDS CAA 72 bp | TTCATTAGCTCTGTGGCCTGTATTCCTGAGGGTTATTaGTGCCACACCCCTTTACCCAACCAATCCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: FISSVACIPEGY*CHTPLPNQSCP Trigger: AGGACAGGATTGGTTGGGTAAAGGGGTGTGGCACAAATAACCCTCAGGAATACAGGCCACAGAGCTAATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000445161.5 ENST00000453236.2 ENST00000668223.1 ENST00000670629.1 |
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| CDS GCA 72 bp | GCCGTGAATCCTGAAGGAAAAGCTCTCTGCCTCAGCTaGTTCAGTGATTCAATTTCACCATCACAACAGAAT | + |
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Preference number: 6 (lower is better) Translates to: AVNPEGKALCLS*FSDSISPSQQN Trigger: ATTCTGTTGTGATGGTGAAATTGAATCACTGAAGCAGCTGAGGCAGAGAGCTTTTCCTTCAGGATTCACGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657224.1 |
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| CDS CAA 72 bp | TGCGAGATAGTTCAGACCCGCGACCAGCCTATTTCCTaGAATAATTTACTTGTTGTCAATTTGTACAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: CEIVQTRDQPIS*NNLLVVNLYSH Trigger: GTGGCTGTACAAATTGACAACAAGTAAATTATTCAAGGAAATAGGCTGGTCGCGGGTCTGAACTATCTCGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670629.1 |
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| CDS CAA 90 bp | TATTTGCAGAGTGTGTATAGGGTACAAGGCTCTGTTTTAGGCCTTTaGGATACATTGATAAGCAAAACAGTCAGGGATCTTTGCCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: YLQSVYRVQGSVLGL*DTLISKTVRDLCPW Trigger: CCAAGGGCAAAGATCCCTGACTGTTTTGCTTATCAATGTATCCAAAAGGCCTAAAACAGAGCCTTGTACCCTATACACACTCTGCAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000415417.6 ENST00000453236.2 ENST00000657224.1 |
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| CDS CAA 90 bp | ACCCGCGACCAGCCTATTTCCTTGAATAATTTACTTGTTGTCAATTaGTACAGCCACATTACACATGCAAATTGTGCTGCCTGTGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: TRDQPISLNNLLVVN*YSHITHANCAACAN Trigger: GTTTGCACAGGCAGCACAATTTGCATGTGTAATGTGGCTGTACAAATTGACAACAAGTAAATTATTCAAGGAAATAGGCTGGTCGCGGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670629.1 |
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| CDS GCA 72 bp | TTTACTTGTTGTCAATTTGTACAGCCACATTACACATaGAAATTGTGCTGCCTGTGCAAACACCACTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: FTCCQFVQPHYT*KLCCLCKHHLE Trigger: CTCCAAGTGGTGTTTGCACAGGCAGCACAATTTGCATGTGTAATGTGGCTGTACAAATTGACAACAAGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670629.1 |
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| CDS CAA 72 bp | TGTTGTCAATTTGTACAGCCACATTACACATGCAAATaGTGCTGCCTGTGCAAACACCACTTGGAGATGATA | + |
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Preference number: 6 (lower is better) Translates to: CCQFVQPHYTCK*CCLCKHHLEMI Trigger: TATCATCTCCAAGTGGTGTTTGCACAGGCAGCACAATTTGCATGTGTAATGTGGCTGTACAAATTGACAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670629.1 |
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| CDS CAA 90 bp | AATAGGCTTTGCGAGATAGTTCAGACCCGCGACCAGCCTATTTCCTaGAATAATTTACTTGTTGTCAATTTGTACAGCCACATTACACAT | + |
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Preference number: 6 (lower is better) Translates to: NRLCEIVQTRDQPIS*NNLLVVNLYSHITH Trigger: ATGTGTAATGTGGCTGTACAAATTGACAACAAGTAAATTATTCAAGGAAATAGGCTGGTCGCGGGTCTGAACTATCTCGCAAAGCCTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670629.1 |
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| CDS GCA 72 bp | TGTCAATTTGTACAGCCACATTACACATGCAAATTGTaGTGCCTGTGCAAACACCACTTGGAGATGATAAAA | + |
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Preference number: 6 (lower is better) Translates to: CQFVQPHYTCKL*CLCKHHLEMIK Trigger: TTTTATCATCTCCAAGTGGTGTTTGCACAGGCAGCACAATTTGCATGTGTAATGTGGCTGTACAAATTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670629.1 |
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| CDS GCA 72 bp | GTACAGCCACATTACACATGCAAATTGTGCTGCCTGTaGAAACACCACTTGGAGATGATAAAAACAAATTTA | + |
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Preference number: 6 (lower is better) Translates to: VQPHYTCKLCCL*KHHLEMIKTNL Trigger: TAAATTTGTTTTTATCATCTCCAAGTGGTGTTTGCACAGGCAGCACAATTTGCATGTGTAATGTGGCTGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670629.1 |
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| CDS CCA 72 bp | ACATTGATAAGCAAAACAGTCAGGGATCTTTGCCCTTaGGGAGTTAAAATTCTAAAGAAGGACACACACAAT | + |
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Preference number: 6 (lower is better) Translates to: TLISKTVRDLCP*GVKILKKDTHN Trigger: ATTGTGTGTGTCCTTCTTTAGAATTTTAACTCCCCAAGGGCAAAGATCCCTGACTGTTTTGCTTATCAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000415417.6 ENST00000453236.2 ENST00000657224.1 |
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| CDS TCA 72 bp | TTCAGTGATTCAATTTCACCATCACAACAGAATAGCTaGGGCAACTGTATCGTCCTTCCTTTTTATTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: FSDSISPSQQNS*GNCIVLPFYSS Trigger: TGAAGAATAAAAAGGAAGGACGATACAGTTGCCTCAGCTATTCTGTTGTGATGGTGAAATTGAATCACTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657224.1 |
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| CDS CAA 72 bp | CAGCCTATTTCCTTGAATAATTTACTTGTTGTCAATTaGTACAGCCACATTACACATGCAAATTGTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: QPISLNNLLVVN*YSHITHANCAA Trigger: GGCAGCACAATTTGCATGTGTAATGTGGCTGTACAAATTGACAACAAGTAAATTATTCAAGGAAATAGGCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670629.1 |
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