Pregenerated sensors for LINC00865 (Homo sapiens)
Ensembl gene IDs: ENSG00000232229Ensembl transcript IDs: ENST00000448490.1, ENST00000448963.5, ENST00000667153.1, ENST00000670043.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGGCGGAGGCTGGAGGTCGCGAGTCGGTGGAGCCCCGCTCGGTGCTaGGGAGACTGCAGTGGCGGCTGGGACCCGGAGCCGTGGGCGAGG | + |
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Preference number: 5 (lower is better) Translates to: RRRLEVASRWSPARC*GDCSGGWDPEPWAR Trigger: CCTCGCCCACGGCTCCGGGTCCCAGCCGCCACTGCAGTCTCCGCAGCACCGAGCGGGGCTCCACCGACTCGCGACCTCCAGCCTCCGCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS GCA 90 bp | TTGAGGCGGAGGCTGGAGGTCGCGAGTCGGTGGAGCCCCGCTCGGTaGTGCGGAGACTGCAGTGGCGGCTGGGACCCGGAGCCGTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: LRRRLEVASRWSPAR*CGDCSGGWDPEPWA Trigger: CGCCCACGGCTCCGGGTCCCAGCCGCCACTGCAGTCTCCGCAGCACCGAGCGGGGCTCCACCGACTCGCGACCTCCAGCCTCCGCCTCAA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS CCA 90 bp | CCGCGCTCCCTGCCCTTGAGGCGGAGGCTGGAGGTCGCGAGTCGGTaGAGCCCCGCTCGGTGCTGCGGAGACTGCAGTGGCGGCTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: PRSLPLRRRLEVASR*SPARCCGDCSGGWD Trigger: GTCCCAGCCGCCACTGCAGTCTCCGCAGCACCGAGCGGGGCTCCACCGACTCGCGACCTCCAGCCTCCGCCTCAAGGGCAGGGAGCGCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS CCA 90 bp | AAGCTCCTCGGCCTCCACGAGCGTCGCCACCCAGGTCACCACGCCTaGGGGCCGAGAGGTTCAGCTGCTCGCACCCGGGCCCCGCATCTT | + |
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Preference number: 5 (lower is better) Translates to: KLLGLHERRHPGHHA*GPRGSAARTRAPHL Trigger: AAGATGCGGGGCCCGGGTGCGAGCAGCTGAACCTCTCGGCCCCCAGGCGTGGTGACCTGGGTGGCGACGCTCGTGGAGGCCGAGGAGCTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS CCA 90 bp | GCTCGGTGCTGCGGAGACTGCAGTGGCGGCTGGGACCCGGAGCCGTaGGCGAGGCCGGCGCGAAGAACTAAGGGAGGACTCAGGCGACAA | + |
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Preference number: 5 (lower is better) Translates to: ARCCGDCSGGWDPEP*ARPARRTKGGLRRQ Trigger: TTGTCGCCTGAGTCCTCCCTTAGTTCTTCGCGCCGGCCTCGCCCACGGCTCCGGGTCCCAGCCGCCACTGCAGTCTCCGCAGCACCGAGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS TCA 90 bp | GATTTAAAAATGGCTTTCCAGAGACCCAGCCGCGCTCCCTGCCCTTaGGGCGGAGGCTGGAGGTCGCGAGTCGGTGGAGCCCCGCTCGGT | + |
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Preference number: 5 (lower is better) Translates to: DLKMAFQRPSRAPCP*GGGWRSRVGGAPLG Trigger: ACCGAGCGGGGCTCCACCGACTCGCGACCTCCAGCCTCCGCCTCAAGGGCAGGGAGCGCGGCTGGGTCTCTGGAAAGCCATTTTTAAATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS CCA 90 bp | GAACTAAGGGAGGACTCAGGCGACAACTCCAGCAGCCTCTCCACTTaGTCCCCCGAAGCGCCGGTCCAGAAGCTCCTCGGCCTCCACGAG | + |
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Preference number: 5 (lower is better) Translates to: ELREDSGDNSSSLST*SPEAPVQKLLGLHE Trigger: CTCGTGGAGGCCGAGGAGCTTCTGGACCGGCGCTTCGGGGGACCAAGTGGAGAGGCTGCTGGAGTTGTCGCCTGAGTCCTCCCTTAGTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS GCA 90 bp | CCACAACAGGAGCTGGCGAAGAAGTGCATGGAAGGCTGTTGCCTCTaGATTGACTGTGGGTTTGGGGCTGCTGTTGGTCAGCAAGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: PQQELAKKCMEGCCL*IDCGFGAAVGQQGR Trigger: CCTGCCTTGCTGACCAACAGCAGCCCCAAACCCACAGTCAATGCAGAGGCAACAGCCTTCCATGCACTTCTTCGCCAGCTCCTGTTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448963.5 ENST00000667153.1 |
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| CDS TCA 90 bp | ACAGGAGCTGGCGAAGAAGTGCATGGAAGGCTGTTGCCTCTGCATTaGCTGTGGGTTTGGGGCTGCTGTTGGTCAGCAAGGCAGGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: TGAGEEVHGRLLPLH*LWVWGCCWSARQAE Trigger: TTCTGCCTGCCTTGCTGACCAACAGCAGCCCCAAACCCACAGTCAATGCAGAGGCAACAGCCTTCCATGCACTTCTTCGCCAGCTCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448963.5 ENST00000667153.1 |
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| CDS GCA 90 bp | GTGAGACCACAACAGGAGCTGGCGAAGAAGTGCATGGAAGGCTGTTaGCTCTGCATTGACTGTGGGTTTGGGGCTGCTGTTGGTCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: VRPQQELAKKCMEGC*LCIDCGFGAAVGQQ Trigger: TTGCTGACCAACAGCAGCCCCAAACCCACAGTCAATGCAGAGGCAACAGCCTTCCATGCACTTCTTCGCCAGCTCCTGTTGTGGTCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448963.5 ENST00000667153.1 |
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| CDS CCA 90 bp | CTTGGTCATGTCCTAGCTCCAAGGGAGTCTAGGCAAGCAAGAGTTTaGCATTTTCATCTCCCATTGGGTGAGGCAGTCTCTCCTCCACAC | + |
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Preference number: 5 (lower is better) Translates to: LGHVLAPRESRQARV*HFHLPLGEAVSPPH Trigger: GTGTGGAGGAGAGACTGCCTCACCCAATGGGAGATGAAAATGCCAAACTCTTGCTTGCCTAGACTCCCTTGGAGCTAGGACATGACCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670043.1 |
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| CDS CCA 90 bp | CACAATAGTGGGAGGAGACGGGGAAGTAAGGCCACCGTTGGAAGGTaGAGAATTGGAGAAAAGTCTCTATTCACCTCTCCTGAAGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: HNSGRRRGSKATVGR*RIGEKSLFTSPEVV Trigger: GACTACTTCAGGAGAGGTGAATAGAGACTTTTCTCCAATTCTCCACCTTCCAACGGTGGCCTTACTTCCCCGTCTCCTCCCACTATTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667153.1 |
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| CDS CCA 90 bp | AGGCTCTCAGTCCCTGCTTCTTTGAGTTACTGGTTCCTGCTTCCATaGCTGAATCTGATTAGTGGAATGTACCTCACTTGGTCATGTCCT | + |
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Preference number: 5 (lower is better) Translates to: RLSVPASLSYWFLLP*LNLISGMYLTWSCP Trigger: AGGACATGACCAAGTGAGGTACATTCCACTAATCAGATTCAGCCATGGAAGCAGGAACCAGTAACTCAAAGAAGCAGGGACTGAGAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670043.1 |
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| CDS TCA 90 bp | TTCCCTTCCGCCTTCCTGCGCTTTTGTGTTTCAGCTAGTTTGAGATaGCTTTCTGTGTCACTTGTACCCAACAGAGTCTCTCCTGAAGTA | + |
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Preference number: 5 (lower is better) Translates to: FPSAFLRFCVSASLR*LSVSLVPNRVSPEV Trigger: TACTTCAGGAGAGACTCTGTTGGGTACAAGTGACACAGAAAGTCATCTCAAACTAGCTGAAACACAAAAGCGCAGGAAGGCGGAAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448963.5 |
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| CDS GCA 90 bp | AAGGAAAAGTCACAGGTTACATATAGAGAACTGGGAACATCCAGTTaGAAGAGTGAGACCACAACAGGAGCTGGCGAAGAAGTGCATGGA | + |
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Preference number: 5 (lower is better) Translates to: KEKSQVTYRELGTSS*KSETTTGAGEEVHG Trigger: TCCATGCACTTCTTCGCCAGCTCCTGTTGTGGTCTCACTCTTGCAACTGGATGTTCCCAGTTCTCTATATGTAACCTGTGACTTTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448963.5 ENST00000667153.1 |
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| CDS CCA 90 bp | CAAGGGAGTCTAGGCAAGCAAGAGTTTGGCATTTTCATCTCCCATTaGGTGAGGCAGTCTCTCCTCCACACTATGGCTAATAATGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: QGSLGKQEFGIFISH*VRQSLLHTMANNVE Trigger: TTCAACATTATTAGCCATAGTGTGGAGGAGAGACTGCCTCACCCAATGGGAGATGAAAATGCCAAACTCTTGCTTGCCTAGACTCCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670043.1 |
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| CDS TCA 90 bp | GCCAGTGACATATCCAGTACCTCGAAGTCCCCATCCCATGCTAAGTaGAACGTGCTTTCTCAACACACAGCTGCAATCTCTACATTTAAA | + |
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Preference number: 5 (lower is better) Translates to: ASDISSTSKSPSHAK*NVLSQHTAAISTFK Trigger: TTTAAATGTAGAGATTGCAGCTGTGTGTTGAGAAAGCACGTTTCACTTAGCATGGGATGGGGACTTCGAGGTACTGGATATGTCACTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS TCA 90 bp | ATGTATGAAGAGCCAGGTTCTATGAAACACAGGCTCACCAAGACATaGCACAGCTCACCTAATGTTGACATCCCTACCAACACTAACAAG | + |
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Preference number: 5 (lower is better) Translates to: MYEEPGSMKHRLTKT*HSSPNVDIPTNTNK Trigger: CTTGTTAGTGTTGGTAGGGATGTCAACATTAGGTGAGCTGTGTCATGTCTTGGTGAGCCTGTGTTTCATAGAACCTGGCTCTTCATACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670043.1 |
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| CDS TCA 90 bp | TGGGGGTGTGTAAAGGCCTGTTTCTTATTCTGGAGGCTAGTTAGATaGGTTCAATTTGTGAACAGTCACCAAGCTGTAGGTGGACAATTT | + |
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Preference number: 5 (lower is better) Translates to: WGCVKACFLFWRLVR*VQFVNSHQAVGGQF Trigger: AAATTGTCCACCTACAGCTTGGTGACTGTTCACAAATTGAACTCATCTAACTAGCCTCCAGAATAAGAAACAGGCCTTTACACACCCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS GCA 90 bp | ACATATCCAGTACCTCGAAGTCCCCATCCCATGCTAAGTGAAACGTaGTTTCTCAACACACAGCTGCAATCTCTACATTTAAAGATACTG | + |
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Preference number: 5 (lower is better) Translates to: TYPVPRSPHPMLSET*FLNTQLQSLHLKIL Trigger: CAGTATCTTTAAATGTAGAGATTGCAGCTGTGTGTTGAGAAAGCACGTTTCACTTAGCATGGGATGGGGACTTCGAGGTACTGGATATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS TCA 90 bp | GTGTTTGTGATAATGATATTGGGTGGATTACATTGCCAGCATGTATaGAGAGCCAGGTTCTATGAAACACAGGCTCACCAAGACATGACA | + |
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Preference number: 5 (lower is better) Translates to: VFVIMILGGLHCQHV*RARFYETQAHQDMT Trigger: TGTCATGTCTTGGTGAGCCTGTGTTTCATAGAACCTGGCTCTTCATACATGCTGGCAATGTAATCCACCCAATATCATTATCACAAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670043.1 |
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| CDS CCA 90 bp | CCAGTACACACGTACAGACAGGCAGGCAATATTAGATATTCACATTaGTGGGTGGGTGAATTGGTACAAACTGCAATGTCTACTAAAACT | + |
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Preference number: 5 (lower is better) Translates to: PVHTYRQAGNIRYSH*WVGELVQTAMSTKT Trigger: AGTTTTAGTAGACATTGCAGTTTGTACCAATTCACCCACCCACCAATGTGAATATCTAATATTGCCTGCCTGTCTGTACGTGTGTACTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS CCA 90 bp | TACTCTTTCACTTCTGCTTCCCAAATCTGGCATAGATATATCTTTTaGCCAAACCGCATAGGTCACTTTATCTTTGGGGAAAGTTCATCC | + |
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Preference number: 5 (lower is better) Translates to: YSFTSASQIWHRYIF*PNRIGHFIFGESSS Trigger: GGATGAACTTTCCCCAAAGATAAAGTGACCTATGCGGTTTGGCCAAAAGATATATCTATGCCAGATTTGGGAAGCAGAAGTGAAAGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448963.5 |
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| CDS CCA 90 bp | GACAGGCAGGCAATATTAGATATTCACATTGGTGGGTGGGTGAATTaGTACAAACTGCAATGTCTACTAAAACTAAAAATATGCATACCT | + |
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Preference number: 5 (lower is better) Translates to: DRQAILDIHIGGWVN*YKLQCLLKLKICIP Trigger: AGGTATGCATATTTTTAGTTTTAGTAGACATTGCAGTTTGTACCAATTCACCCACCCACCAATGTGAATATCTAATATTGCCTGCCTGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS CCA 90 bp | ACACGTACAGACAGGCAGGCAATATTAGATATTCACATTGGTGGGTaGGTGAATTGGTACAAACTGCAATGTCTACTAAAACTAAAAATA | + |
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Preference number: 5 (lower is better) Translates to: TRTDRQAILDIHIGG*VNWYKLQCLLKLKI Trigger: TATTTTTAGTTTTAGTAGACATTGCAGTTTGTACCAATTCACCCACCCACCAATGTGAATATCTAATATTGCCTGCCTGTCTGTACGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS CCA 90 bp | TACTCTTTCACTTCTGCTTCCCAAATCTGGCATAGATATATCTTTTaGCCAAACCTGATATGGAGACATAATGGAAATGAAGTTCTAGCT | + |
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Preference number: 5 (lower is better) Translates to: YSFTSASQIWHRYIF*PNLIWRHNGNEVLA Trigger: AGCTAGAACTTCATTTCCATTATGTCTCCATATCAGGTTTGGCCAAAAGATATATCTATGCCAGATTTGGGAAGCAGAAGTGAAAGAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667153.1 |
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| CDS GCA 72 bp | GCGAGTCGGTGGAGCCCCGCTCGGTGCTGCGGAGACTaGAGTGGCGGCTGGGACCCGGAGCCGTGGGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: ASRWSPARCCGD*SGGWDPEPWAR Trigger: CCTCGCCCACGGCTCCGGGTCCCAGCCGCCACTGCAGTCTCCGCAGCACCGAGCGGGGCTCCACCGACTCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS GCA 72 bp | CTGGAGGTCGCGAGTCGGTGGAGCCCCGCTCGGTGCTaGGGAGACTGCAGTGGCGGCTGGGACCCGGAGCCG | + |
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Preference number: 6 (lower is better) Translates to: LEVASRWSPARC*GDCSGGWDPEP Trigger: CGGCTCCGGGTCCCAGCCGCCACTGCAGTCTCCGCAGCACCGAGCGGGGCTCCACCGACTCGCGACCTCCAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS CCA 72 bp | GGCCTCCACGAGCGTCGCCACCCAGGTCACCACGCCTaGGGGCCGAGAGGTTCAGCTGCTCGCACCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GLHERRHPGHHA*GPRGSAARTRA Trigger: GGCCCGGGTGCGAGCAGCTGAACCTCTCGGCCCCCAGGCGTGGTGACCTGGGTGGCGACGCTCGTGGAGGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS CCA 72 bp | CTGCCCTTGAGGCGGAGGCTGGAGGTCGCGAGTCGGTaGAGCCCCGCTCGGTGCTGCGGAGACTGCAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LPLRRRLEVASR*SPARCCGDCSG Trigger: GCCACTGCAGTCTCCGCAGCACCGAGCGGGGCTCCACCGACTCGCGACCTCCAGCCTCCGCCTCAAGGGCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS CCA 72 bp | TGCGGAGACTGCAGTGGCGGCTGGGACCCGGAGCCGTaGGCGAGGCCGGCGCGAAGAACTAAGGGAGGACTC | + |
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Preference number: 6 (lower is better) Translates to: CGDCSGGWDPEP*ARPARRTKGGL Trigger: GAGTCCTCCCTTAGTTCTTCGCGCCGGCCTCGCCCACGGCTCCGGGTCCCAGCCGCCACTGCAGTCTCCGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS TCA 72 bp | ATGGCTTTCCAGAGACCCAGCCGCGCTCCCTGCCCTTaGGGCGGAGGCTGGAGGTCGCGAGTCGGTGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: MAFQRPSRAPCP*GGGWRSRVGGA Trigger: GGCTCCACCGACTCGCGACCTCCAGCCTCCGCCTCAAGGGCAGGGAGCGCGGCTGGGTCTCTGGAAAGCCAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS CAA 90 bp | AGAACTAAGGGAGGACTCAGGCGACAACTCCAGCAGCCTCTCCACTaGGTCCCCCGAAGCGCCGGTCCAGAAGCTCCTCGGCCTCCACGA | + |
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Preference number: 6 (lower is better) Translates to: RTKGGLRRQLQQPLH*VPRSAGPEAPRPPR Trigger: TCGTGGAGGCCGAGGAGCTTCTGGACCGGCGCTTCGGGGGACCAAGTGGAGAGGCTGCTGGAGTTGTCGCCTGAGTCCTCCCTTAGTTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS CAA 90 bp | AACAGGAGCTGGCGAAGAAGTGCATGGAAGGCTGTTGCCTCTGCATaGACTGTGGGTTTGGGGCTGCTGTTGGTCAGCAAGGCAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: NRSWRRSAWKAVASA*TVGLGLLLVSKAGR Trigger: TCTGCCTGCCTTGCTGACCAACAGCAGCCCCAAACCCACAGTCAATGCAGAGGCAACAGCCTTCCATGCACTTCTTCGCCAGCTCCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448963.5 ENST00000667153.1 |
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| CDS TCA 72 bp | GGCGAAGAAGTGCATGGAAGGCTGTTGCCTCTGCATTaGCTGTGGGTTTGGGGCTGCTGTTGGTCAGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: GEEVHGRLLPLH*LWVWGCCWSAR Trigger: CCTTGCTGACCAACAGCAGCCCCAAACCCACAGTCAATGCAGAGGCAACAGCCTTCCATGCACTTCTTCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448963.5 ENST00000667153.1 |
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| CDS GCA 72 bp | GAGCTGGCGAAGAAGTGCATGGAAGGCTGTTGCCTCTaGATTGACTGTGGGTTTGGGGCTGCTGTTGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: ELAKKCMEGCCL*IDCGFGAAVGQ Trigger: CTGACCAACAGCAGCCCCAAACCCACAGTCAATGCAGAGGCAACAGCCTTCCATGCACTTCTTCGCCAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448963.5 ENST00000667153.1 |
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| CDS CAA 72 bp | GTTGCCTCTGCATTGACTGTGGGTTTGGGGCTGCTGTaGGTCAGCAAGGCAGGCAGAAAAGGACACCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: VASALTVGLGLL*VSKAGRKGHQL Trigger: CAGCTGGTGTCCTTTTCTGCCTGCCTTGCTGACCAACAGCAGCCCCAAACCCACAGTCAATGCAGAGGCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000448963.5 ENST00000667153.1 |
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| CDS CAA 90 bp | TGGAAGGCTGTTGCCTCTGCATTGACTGTGGGTTTGGGGCTGCTGTaGGTCAGCAAGGCAGGCAGAAAAGGACACCAGCTGGAGTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: WKAVASALTVGLGLL*VSKAGRKGHQLESR Trigger: TCTTGACTCCAGCTGGTGTCCTTTTCTGCCTGCCTTGCTGACCAACAGCAGCCCCAAACCCACAGTCAATGCAGAGGCAACAGCCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000448963.5 ENST00000667153.1 |
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| CDS GCA 72 bp | CAACAGGAGCTGGCGAAGAAGTGCATGGAAGGCTGTTaGCTCTGCATTGACTGTGGGTTTGGGGCTGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: QQELAKKCMEGC*LCIDCGFGAAV Trigger: AACAGCAGCCCCAAACCCACAGTCAATGCAGAGGCAACAGCCTTCCATGCACTTCTTCGCCAGCTCCTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448963.5 ENST00000667153.1 |
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| CDS TCA 72 bp | ATGAACAGGAACTTAAGCCCCGGACCTCCGCCATACTaGATCATGGCGTCCATGGGTTACGGACAGGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: MNRNLSPGPPPY*IMASMGYGQER Trigger: TCTTTCCTGTCCGTAACCCATGGACGCCATGATTCAGTATGGCGGAGGTCCGGGGCTTAAGTTCCTGTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS CCA 72 bp | GGGAGGAGACGGGGAAGTAAGGCCACCGTTGGAAGGTaGAGAATTGGAGAAAAGTCTCTATTCACCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: GRRRGSKATVGR*RIGEKSLFTSP Trigger: AGGAGAGGTGAATAGAGACTTTTCTCCAATTCTCCACCTTCCAACGGTGGCCTTACTTCCCCGTCTCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667153.1 |
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| CDS CCA 72 bp | TCTGCTGCCACAGCTGCACTAGGAATTCAGTCTGAATaGAGGCTCTCAGTCCCTGCTTCTTTGAGTTACTGG | + |
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Preference number: 6 (lower is better) Translates to: SAATAALGIQSE*RLSVPASLSYW Trigger: CCAGTAACTCAAAGAAGCAGGGACTGAGAGCCTCCATTCAGACTGAATTCCTAGTGCAGCTGTGGCAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670043.1 |
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| CDS TCA 72 bp | GAGCCAGGTTCTATGAAACACAGGCTCACCAAGACATaGCACAGCTCACCTAATGTTGACATCCCTACCAAC | + |
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Preference number: 6 (lower is better) Translates to: EPGSMKHRLTKT*HSSPNVDIPTN Trigger: GTTGGTAGGGATGTCAACATTAGGTGAGCTGTGTCATGTCTTGGTGAGCCTGTGTTTCATAGAACCTGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670043.1 |
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| CDS CCA 72 bp | CTAGGCAAGCAAGAGTTTGGCATTTTCATCTCCCATTaGGTGAGGCAGTCTCTCCTCCACACTATGGCTAAT | + |
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Preference number: 6 (lower is better) Translates to: LGKQEFGIFISH*VRQSLLHTMAN Trigger: ATTAGCCATAGTGTGGAGGAGAGACTGCCTCACCCAATGGGAGATGAAAATGCCAAACTCTTGCTTGCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670043.1 |
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| CDS CAA 72 bp | ACAATAGTGGGAGGAGACGGGGAAGTAAGGCCACCGTaGGAAGGTGGAGAATTGGAGAAAAGTCTCTATTCA | + |
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Preference number: 6 (lower is better) Translates to: TIVGGDGEVRPP*EGGELEKSLYS Trigger: TGAATAGAGACTTTTCTCCAATTCTCCACCTTCCAACGGTGGCCTTACTTCCCCGTCTCCTCCCACTATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667153.1 |
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| CDS CAA 72 bp | ATTCAGTCTGAATGGAGGCTCTCAGTCCCTGCTTCTTaGAGTTACTGGTTCCTGCTTCCATGGCTGAATCTG | + |
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Preference number: 6 (lower is better) Translates to: IQSEWRLSVPAS*SYWFLLPWLNL Trigger: CAGATTCAGCCATGGAAGCAGGAACCAGTAACTCAAAGAAGCAGGGACTGAGAGCCTCCATTCAGACTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670043.1 |
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| CDS CAA 90 bp | GCACTAGGAATTCAGTCTGAATGGAGGCTCTCAGTCCCTGCTTCTTaGAGTTACTGGTTCCTGCTTCCATGGCTGAATCTGATTAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: ALGIQSEWRLSVPAS*SYWFLLPWLNLISG Trigger: TCCACTAATCAGATTCAGCCATGGAAGCAGGAACCAGTAACTCAAAGAAGCAGGGACTGAGAGCCTCCATTCAGACTGAATTCCTAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670043.1 |
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| CDS TCA 72 bp | ATATCCAGTACCTCGAAGTCCCCATCCCATGCTAAGTaGAACGTGCTTTCTCAACACACAGCTGCAATCTCT | + |
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Preference number: 6 (lower is better) Translates to: ISSTSKSPSHAK*NVLSQHTAAIS Trigger: AGAGATTGCAGCTGTGTGTTGAGAAAGCACGTTTCACTTAGCATGGGATGGGGACTTCGAGGTACTGGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS GCA 72 bp | TCACAGGTTACATATAGAGAACTGGGAACATCCAGTTaGAAGAGTGAGACCACAACAGGAGCTGGCGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: SQVTYRELGTSS*KSETTTGAGEE Trigger: TTCTTCGCCAGCTCCTGTTGTGGTCTCACTCTTGCAACTGGATGTTCCCAGTTCTCTATATGTAACCTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448963.5 ENST00000667153.1 |
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| CDS CCA 72 bp | GTCCCTGCTTCTTTGAGTTACTGGTTCCTGCTTCCATaGCTGAATCTGATTAGTGGAATGTACCTCACTTGG | + |
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Preference number: 6 (lower is better) Translates to: VPASLSYWFLLP*LNLISGMYLTW Trigger: CCAAGTGAGGTACATTCCACTAATCAGATTCAGCCATGGAAGCAGGAACCAGTAACTCAAAGAAGCAGGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670043.1 |
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| CDS GCA 72 bp | GTACCTCGAAGTCCCCATCCCATGCTAAGTGAAACGTaGTTTCTCAACACACAGCTGCAATCTCTACATTTA | + |
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Preference number: 6 (lower is better) Translates to: VPRSPHPMLSET*FLNTQLQSLHL Trigger: TAAATGTAGAGATTGCAGCTGTGTGTTGAGAAAGCACGTTTCACTTAGCATGGGATGGGGACTTCGAGGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS CAA 72 bp | ACAGGCTCACCAAGACATGACACAGCTCACCTAATGTaGACATCCCTACCAACACTAACAAGCAAAAGACTC | + |
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Preference number: 6 (lower is better) Translates to: TGSPRHDTAHLM*TSLPTLTSKRL Trigger: GAGTCTTTTGCTTGTTAGTGTTGGTAGGGATGTCAACATTAGGTGAGCTGTGTCATGTCTTGGTGAGCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670043.1 |
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| CDS TCA 72 bp | CTTGTACCCAACAGAGTCTCTCCTGAAGTAGTCAAGTaGAGGAAAAGTCACAGGTTACATATAGAGAACTGG | + |
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Preference number: 6 (lower is better) Translates to: LVPNRVSPEVVK*RKSHRLHIENW Trigger: CCAGTTCTCTATATGTAACCTGTGACTTTTCCTTCACTTGACTACTTCAGGAGAGACTCTGTTGGGTACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448963.5 |
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| CDS TCA 72 bp | ACTTTCTGTGTCACTTGTACCCAACAGAGTCTCTCCTaGAGTAGTCAAGTGAAGGAAAAGTCACAGGTTACA | + |
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Preference number: 6 (lower is better) Translates to: TFCVTCTQQSLS*SSQVKEKSQVT Trigger: TGTAACCTGTGACTTTTCCTTCACTTGACTACTTCAGGAGAGACTCTGTTGGGTACAAGTGACACAGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448963.5 |
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| CDS TCA 72 bp | ATAATGATATTGGGTGGATTACATTGCCAGCATGTATaGAGAGCCAGGTTCTATGAAACACAGGCTCACCAA | + |
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Preference number: 6 (lower is better) Translates to: IMILGGLHCQHV*RARFYETQAHQ Trigger: TTGGTGAGCCTGTGTTTCATAGAACCTGGCTCTTCATACATGCTGGCAATGTAATCCACCCAATATCATTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670043.1 |
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| CDS GCA 72 bp | TCATTAGGCACTGGAAAATGCAAATTAAAACCACAATaGTATACCAGTACACACGTACAGACAGGCAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: SLGTGKCKLKPQ*YTSTHVQTGRQ Trigger: TTGCCTGCCTGTCTGTACGTGTGTACTGGTATAGCATTGTGGTTTTAATTTGCATTTTCCAGTGCCTAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS CCA 72 bp | AGTAACGGTTACTCTTTCACTTCTGCTTCCCAAATCTaGCATAGATATATCTTTTGGCCAAACCGCATAGGT | + |
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Preference number: 6 (lower is better) Translates to: SNGYSFTSASQI*HRYIFWPNRIG Trigger: ACCTATGCGGTTTGGCCAAAAGATATATCTATGCCAGATTTGGGAAGCAGAAGTGAAAGAGTAACCGTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448963.5 |
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| CDS CAA 90 bp | CGAGAGCACCTCCTTTTACCATATTTAATTTCCAGTAGCAAAATCTaGCTTCAACCTAAGGTGCAACTAACCCTGCTACAACTAGAAACA | + |
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Preference number: 6 (lower is better) Translates to: REHLLLPYLISSSKI*LQPKVQLTLLQLET Trigger: TGTTTCTAGTTGTAGCAGGGTTAGTTGCACCTTAGGTTGAAGCAAGATTTTGCTACTGGAAATTAAATATGGTAAAAGGAGGTGCTCTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667153.1 |
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| CDS TCA 72 bp | CCAACAGAAAGCCAGGTATATGCTTACCAAAAGACCTaGATGTTTATAGCAACACTCTTCTTAGCATCCACA | + |
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Preference number: 6 (lower is better) Translates to: PTESQVYAYQKT*MFIATLFLAST Trigger: TGTGGATGCTAAGAAGAGTGTTGCTATAAACATTCAGGTCTTTTGGTAAGCATATACCTGGCTTTCTGTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS CCA 72 bp | GACAGGCAGGCAATATTAGATATTCACATTGGTGGGTaGGTGAATTGGTACAAACTGCAATGTCTACTAAAA | + |
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Preference number: 6 (lower is better) Translates to: DRQAILDIHIGG*VNWYKLQCLLK Trigger: TTTTAGTAGACATTGCAGTTTGTACCAATTCACCCACCCACCAATGTGAATATCTAATATTGCCTGCCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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| CDS CCA 72 bp | AGTAACGGTTACTCTTTCACTTCTGCTTCCCAAATCTaGCATAGATATATCTTTTGGCCAAACCTGATATGG | + |
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Preference number: 6 (lower is better) Translates to: SNGYSFTSASQI*HRYIFWPNLIW Trigger: CCATATCAGGTTTGGCCAAAAGATATATCTATGCCAGATTTGGGAAGCAGAAGTGAAAGAGTAACCGTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667153.1 |
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| CDS CCA 72 bp | TTCAATGGGAAAGGTGTTTGTGATAATGATATTGGGTaGATTACATTGCCAGCATGTATGAAGAGCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: FNGKGVCDNDIG*ITLPACMKSQV Trigger: AACCTGGCTCTTCATACATGCTGGCAATGTAATCCACCCAATATCATTATCACAAACACCTTTCCCATTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670043.1 |
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| CDS CAA 90 bp | AGACAGGCAGGCAATATTAGATATTCACATTGGTGGGTGGGTGAATaGGTACAAACTGCAATGTCTACTAAAACTAAAAATATGCATACC | + |
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Preference number: 6 (lower is better) Translates to: RQAGNIRYSHWWVGE*VQTAMSTKTKNMHT Trigger: GGTATGCATATTTTTAGTTTTAGTAGACATTGCAGTTTGTACCAATTCACCCACCCACCAATGTGAATATCTAATATTGCCTGCCTGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000448490.1 ENST00000448963.5 |
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