Pregenerated sensors for LINC00862 (Homo sapiens)
Ensembl gene IDs: ENSG00000203721Ensembl transcript IDs: ENST00000367355.6, ENST00000367356.1, ENST00000636153.1, ENST00000637098.1, ENST00000656731.1, ENST00000669359.1, ENST00000669708.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGTGTCACTAACCGACCCTCCTGTGACACTGGCAGAGGGAGAGAGTaGGAGCTTACAGGGCACTGTAGAAAGCTGGGAACATCTAGATGC | + |
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Preference number: 5 (lower is better) Translates to: CVTNRPSCDTGRGRE*ELTGHCRKLGTSRC Trigger: GCATCTAGATGTTCCCAGCTTTCTACAGTGCCCTGTAAGCTCGCACTCTCTCCCTCTGCCAGTGTCACAGGAGGGTCGGTTAGTGACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636153.1 |
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| CDS CCA 90 bp | TGGCTGGCAGGCCAGAGAGCAGCTTCCATCGTTTTCTGTTCACCCTaGGGTCTCTTCAGCCTGGCAGACAATCCAGTTTTGATCATGTCC | + |
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Preference number: 5 (lower is better) Translates to: WLAGQRAASIVFCSP*GLFSLADNPVLIMS Trigger: GGACATGATCAAAACTGGATTGTCTGCCAGGCTGAAGAGACCCCAGGGTGAACAGAAAACGATGGAAGCTGCTCTCTGGCCTGCCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636153.1 |
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| CDS TCA 90 bp | GCTCGTGCCAGGGTAGAGAATGGGTTGCACAGAAGGCACAGGGCTTaGCAGATCAGATCAAAGGCTGTTGCAACAATCCAGGTTGGATCC | + |
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Preference number: 5 (lower is better) Translates to: ARARVENGLHRRHRA*QIRSKAVATIQVGS Trigger: GGATCCAACCTGGATTGTTGCAACAGCCTTTGATCTGATCTGTCAAGCCCTGTGCCTTCTGTGCAACCCATTCTCTACCCTGGCACGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS CCA 90 bp | TTACAGGGCACTGTAGAAAGCTGGGAACATCTAGATGCTAGAGGCTaGCATGGAGACACTATAGAAGGCTGTTGCTGCTGCACCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: LQGTVESWEHLDARG*HGDTIEGCCCCTWW Trigger: CCACCAGGTGCAGCAGCAACAGCCTTCTATAGTGTCTCCATGCCAGCCTCTAGCATCTAGATGTTCCCAGCTTTCTACAGTGCCCTGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636153.1 |
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| CDS CCA 90 bp | GAGTTCGGAACTGGCATGGTAGGTAGTCTTAAAGGAATATGTGATTaGCTGGCAGGCCAGAGAGCAGCTTCCATCGTTTTCTGTTCACCC | + |
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Preference number: 5 (lower is better) Translates to: EFGTGMVGSLKGICD*LAGQRAASIVFCSP Trigger: GGGTGAACAGAAAACGATGGAAGCTGCTCTCTGGCCTGCCAGCCAATCACATATTCCTTTAAGACTACCTACCATGCCAGTTCCGAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636153.1 |
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| CDS TCA 90 bp | TCTGTTCACCCTGGGGTCTCTTCAGCCTGGCAGACAATCCAGTTTTaGTCATGTCCTGGGCTCTCTAAGAGAAATTCACAGCTATTCTGT | + |
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Preference number: 5 (lower is better) Translates to: SVHPGVSSAWQTIQF*SCPGLSKRNSQLFC Trigger: ACAGAATAGCTGTGAATTTCTCTTAGAGAGCCCAGGACATGATCAAAACTGGATTGTCTGCCAGGCTGAAGAGACCCCAGGGTGAACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636153.1 |
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| CDS GCA 90 bp | ACCTCCGTAGAGAAGGAGACGTTGTTGTCAGTTTTGGCTTCCTTTTaGAGTCAGGGACTGGGACCCAGAGTTATCTATTTGCATTTCAAC | + |
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Preference number: 5 (lower is better) Translates to: TSVEKETLLSVLASF*SQGLGPRVIYLHFN Trigger: GTTGAAATGCAAATAGATAACTCTGGGTCCCAGTCCCTGACTGCAAAAGGAAGCCAAAACTGACAACAACGTCTCCTTCTCTACGGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000367356.1 ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS CCA 90 bp | AAGGTTTCTAATTGGGTGAGTGAAGGCACACATTGTCAACCGGGCTaGGGGCACAGAAAGAGGACCATGAAGATAAAGAGATTCAATCCA | + |
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Preference number: 5 (lower is better) Translates to: KVSNWVSEGTHCQPG*GHRKRTMKIKRFNP Trigger: TGGATTGAATCTCTTTATCTTCATGGTCCTCTTTCTGTGCCCCCAGCCCGGTTGACAATGTGTGCCTTCACTCACCCAATTAGAAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS TCA 90 bp | ATGAAGCTCAGAGCAGGTGCAGCACTGAAAACAGGACACTTTAGGTaGCAGCCTACAGACTGCTATTCTGAGAAAAGATCTGTAGTCCTA | + |
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Preference number: 5 (lower is better) Translates to: MKLRAGAALKTGHFR*QPTDCYSEKRSVVL Trigger: TAGGACTACAGATCTTTTCTCAGAATAGCAGTCTGTAGGCTGTCACCTAAAGTGTCCTGTTTTCAGTGCTGCACCTGCTCTGAGCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000367355.6 ENST00000636153.1 ENST00000637098.1 ENST00000669359.1 ENST00000669708.1 |
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| CDS TCA 90 bp | TTTAAAATTCAGTTCCCCAGTCATGACAGCTACTTTATAAGTACCTaGTGGCTGCCTGCAGCTGAGTTCGGAACTGGCATGGTAGGTAGT | + |
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Preference number: 5 (lower is better) Translates to: FKIQFPSHDSYFIST*WLPAAEFGTGMVGS Trigger: ACTACCTACCATGCCAGTTCCGAACTCAGCTGCAGGCAGCCATCAGGTACTTATAAAGTAGCTGTCATGACTGGGGAACTGAATTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636153.1 |
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| CDS TCA 90 bp | CTTAAGCACCTTGGGACTCCAGTCCACGAGAAGAAATACATCTTGTaGGATTTTTGTACAGCCTTTCTACAAACCTCCGTAGAGAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LKHLGTPVHEKKYIL*DFCTAFLQTSVEKE Trigger: CTCCTTCTCTACGGAGGTTTGTAGAAAGGCTGTACAAAAATCTCACAAGATGTATTTCTTCTCGTGGACTGGAGTCCCAAGGTGCTTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000367356.1 ENST00000636153.1 ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS TCA 90 bp | AGGGAAGGCATTAAGATTAAAGCCATGATAACTGGATGCAATGCCTaGTTTTCAACTGGATCCAGAATAAGGTTGCTTTGTAGCCATCCG | + |
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Preference number: 5 (lower is better) Translates to: REGIKIKAMITGCNA*FSTGSRIRLLCSHP Trigger: CGGATGGCTACAAAGCAACCTTATTCTGGATCCAGTTGAAAATCAGGCATTGCATCCAGTTATCATGGCTTTAATCTTAATGCCTTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367356.1 |
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| CDS GCA 90 bp | CCCTCCTTCGTGTCTTCTCTTCTCCTGTCTCAAATCTCCCTATTCTaGAGAATAACTGAGCTGGACTCTTCAAAAATAGCAGTATTAAGA | + |
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Preference number: 5 (lower is better) Translates to: PSFVSSLLLSQISLF*RITELDSSKIAVLR Trigger: TCTTAATACTGCTATTTTTGAAGAGTCCAGCTCAGTTATTCTGCAGAATAGGGAGATTTGAGACAGGAGAAGAGAAGACACGAAGGAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367356.1 |
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| CDS TCA 90 bp | AGGGAAGGCATTAAGATTAAAGCCATGATAACTGGATGCAATGCCTaGTTTTCAACTGGATCCATGAAGATAAAGAGATTCAATCCACAT | + |
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Preference number: 5 (lower is better) Translates to: REGIKIKAMITGCNA*FSTGSMKIKRFNPH Trigger: ATGTGGATTGAATCTCTTTATCTTCATGGATCCAGTTGAAAATCAGGCATTGCATCCAGTTATCATGGCTTTAATCTTAATGCCTTCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367355.6 ENST00000669708.1 |
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| CDS TCA 90 bp | GTCTTCTCTTCTCCTGTCTCAAATCTCCCTATTCTGCAGAATAACTaGGCTGGACTCTTCAAAAATAGCAGTATTAAGATATTCCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: VFSSPVSNLPILQNN*AGLFKNSSIKIFPK Trigger: TTTTGGGAATATCTTAATACTGCTATTTTTGAAGAGTCCAGCTCAGTTATTCTGCAGAATAGGGAGATTTGAGACAGGAGAAGAGAAGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367356.1 |
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| CDS GCA 90 bp | GCTGGACTCTTCAAAAATAGCAGTATTAAGATATTCCCAAAACAGTaGAGGGAAGGCATTAAGATTAAAGCCATGATAACTGGATGCAAT | + |
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Preference number: 5 (lower is better) Translates to: AGLFKNSSIKIFPKQ*REGIKIKAMITGCN Trigger: ATTGCATCCAGTTATCATGGCTTTAATCTTAATGCCTTCCCTGCACTGTTTTGGGAATATCTTAATACTGCTATTTTTGAAGAGTCCAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000367355.6 ENST00000367356.1 ENST00000669708.1 |
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| CDS GCA 72 bp | AACCGACCCTCCTGTGACACTGGCAGAGGGAGAGAGTaGGAGCTTACAGGGCACTGTAGAAAGCTGGGAACA | + |
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Preference number: 6 (lower is better) Translates to: NRPSCDTGRGRE*ELTGHCRKLGT Trigger: TGTTCCCAGCTTTCTACAGTGCCCTGTAAGCTCGCACTCTCTCCCTCTGCCAGTGTCACAGGAGGGTCGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636153.1 |
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| CDS CCA 72 bp | GGCCAGAGAGCAGCTTCCATCGTTTTCTGTTCACCCTaGGGTCTCTTCAGCCTGGCAGACAATCCAGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: GQRAASIVFCSP*GLFSLADNPVL Trigger: CAAAACTGGATTGTCTGCCAGGCTGAAGAGACCCCAGGGTGAACAGAAAACGATGGAAGCTGCTCTCTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636153.1 |
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| CDS CAA 72 bp | GGACTTGGACATTACACGGTTGAGGGAGGCAGGAGGTaGAAAGATCAGGGATGTGTCACTAACCGACCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GLGHYTVEGGRR*KDQGCVTNRPS Trigger: GGAGGGTCGGTTAGTGACACATCCCTGATCTTTCAACCTCCTGCCTCCCTCAACCGTGTAATGTCCAAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636153.1 |
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| CDS TCA 72 bp | GACTTGGACATTACACGGTTGAGGGAGGCAGGAGGTTaGAAGATCAGGGATGTGTCACTAACCGACCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: DLDITRLREAGG*KIRDVSLTDPP Trigger: AGGAGGGTCGGTTAGTGACACATCCCTGATCTTTCAACCTCCTGCCTCCCTCAACCGTGTAATGTCCAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636153.1 |
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| CDS TCA 72 bp | GAAGAGTACAGGATACCTCCAAGGTTTCTAATTGGGTaGGTGAAGGCACACATTGTCAACCGGGCTGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: EEYRIPPRFLIG*VKAHIVNRAGG Trigger: GCCCCCAGCCCGGTTGACAATGTGTGCCTTCACTCACCCAATTAGAAACCTTGGAGGTATCCTGTACTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS TCA 72 bp | AGGAACTCACTGGAGAAGTTTCTGAGGTTCGGGGCATaGGCTTTGGAGTCAGGTGGGCTGAATGCTGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RNSLEKFLRFGA*ALESGGLNAGS Trigger: AGAACCAGCATTCAGCCCACCTGACTCCAAAGCTCATGCCCCGAACCTCAGAAACTTCTCCAGTGAGTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS CCA 72 bp | TCCCAAGTCCCAAATCCAGGTATTAGTATATACTCTTaGGCTCTTCCAGCTCCTGGTGGCTGTTGGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SQVPNPGISIYS*ALPAPGGCWCS Trigger: GGAGCACCAACAGCCACCAGGAGCTGGAAGAGCCCAAGAGTATATACTAATACCTGGATTTGGGACTTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367355.6 ENST00000367356.1 ENST00000669708.1 |
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| CDS CAA 72 bp | CAAACCTCCGTAGAGAAGGAGACGTTGTTGTCAGTTTaGGCTTCCTTTTGCAGTCAGGGACTGGGACCCAGA | + |
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Preference number: 6 (lower is better) Translates to: QTSVEKETLLSV*ASFCSQGLGPR Trigger: TCTGGGTCCCAGTCCCTGACTGCAAAAGGAAGCCAAAACTGACAACAACGTCTCCTTCTCTACGGAGGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000367356.1 ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS TCA 72 bp | CCTGGGGTCTCTTCAGCCTGGCAGACAATCCAGTTTTaGTCATGTCCTGGGCTCTCTAAGAGAAATTCACAG | + |
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Preference number: 6 (lower is better) Translates to: PGVSSAWQTIQF*SCPGLSKRNSQ Trigger: CTGTGAATTTCTCTTAGAGAGCCCAGGACATGATCAAAACTGGATTGTCTGCCAGGCTGAAGAGACCCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636153.1 |
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| CDS CCA 72 bp | ACTGTAGAAAGCTGGGAACATCTAGATGCTAGAGGCTaGCATGGAGACACTATAGAAGGCTGTTGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TVESWEHLDARG*HGDTIEGCCCC Trigger: GCAGCAGCAACAGCCTTCTATAGTGTCTCCATGCCAGCCTCTAGCATCTAGATGTTCCCAGCTTTCTACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636153.1 |
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| CDS CCA 72 bp | GACAGAAGAGTACAGGATACCTCCAAGGTTTCTAATTaGGTGAGTGAAGGCACACATTGTCAACCGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: DRRVQDTSKVSN*VSEGTHCQPGW Trigger: CCAGCCCGGTTGACAATGTGTGCCTTCACTCACCCAATTAGAAACCTTGGAGGTATCCTGTACTCTTCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS CAA 90 bp | TCTATTATAGGACTTGGACATTACACGGTTGAGGGAGGCAGGAGGTaGAAAGATCAGGGATGTGTCACTAACCGACCCTCCTGTGACACT | + |
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Preference number: 6 (lower is better) Translates to: SIIGLGHYTVEGGRR*KDQGCVTNRPSCDT Trigger: AGTGTCACAGGAGGGTCGGTTAGTGACACATCCCTGATCTTTCAACCTCCTGCCTCCCTCAACCGTGTAATGTCCAAGTCCTATAATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636153.1 |
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| CDS CCA 72 bp | ACTGGCATGGTAGGTAGTCTTAAAGGAATATGTGATTaGCTGGCAGGCCAGAGAGCAGCTTCCATCGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: TGMVGSLKGICD*LAGQRAASIVF Trigger: GAAAACGATGGAAGCTGCTCTCTGGCCTGCCAGCCAATCACATATTCCTTTAAGACTACCTACCATGCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636153.1 |
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| CDS CAA 72 bp | GCCTTTCTACAAACCTCCGTAGAGAAGGAGACGTTGTaGTCAGTTTTGGCTTCCTTTTGCAGTCAGGGACTG | + |
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Preference number: 6 (lower is better) Translates to: AFLQTSVEKETL*SVLASFCSQGL Trigger: CAGTCCCTGACTGCAAAAGGAAGCCAAAACTGACAACAACGTCTCCTTCTCTACGGAGGTTTGTAGAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000367356.1 ENST00000636153.1 ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS CAA 90 bp | GCCTTTCTACAAACCTCCGTAGAGAAGGAGACGTTGTTGTCAGTTTaGGCTTCCTTTTGCAGTCAGGGACTGGGACCCAGAGTTATCTAT | + |
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Preference number: 6 (lower is better) Translates to: AFLQTSVEKETLLSV*ASFCSQGLGPRVIY Trigger: ATAGATAACTCTGGGTCCCAGTCCCTGACTGCAAAAGGAAGCCAAAACTGACAACAACGTCTCCTTCTCTACGGAGGTTTGTAGAAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000367356.1 ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS TCA 72 bp | TGCTGGGGAAAGTTTCCCAGTACAGATAGCACACCATaGCGTCTTCGTAAAAAGATGAAGCTCAGAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: CWGKFPSTDSTP*RLRKKMKLRAG Trigger: ACCTGCTCTGAGCTTCATCTTTTTACGAAGACGTCATGGTGTGCTATCTGTACTGGGAAACTTTCCCCAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000367355.6 ENST00000636153.1 ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 ENST00000669708.1 |
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| CDS GCA 72 bp | GAGAAGGAGACGTTGTTGTCAGTTTTGGCTTCCTTTTaGAGTCAGGGACTGGGACCCAGAGTTATCTATTTG | + |
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Preference number: 6 (lower is better) Translates to: EKETLLSVLASF*SQGLGPRVIYL Trigger: CAAATAGATAACTCTGGGTCCCAGTCCCTGACTGCAAAAGGAAGCCAAAACTGACAACAACGTCTCCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000367356.1 ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS GCA 72 bp | AAGGCACAGGGCTTGACAGATCAGATCAAAGGCTGTTaGAACAATCCAGGTTGGATCCAGTCCAAACTAATG | + |
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Preference number: 6 (lower is better) Translates to: KAQGLTDQIKGC*NNPGWIQSKLM Trigger: CATTAGTTTGGACTGGATCCAACCTGGATTGTTGCAACAGCCTTTGATCTGATCTGTCAAGCCCTGTGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS CAA 72 bp | ACAGCCTTTCTACAAACCTCCGTAGAGAAGGAGACGTaGTTGTCAGTTTTGGCTTCCTTTTGCAGTCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: TAFLQTSVEKET*LSVLASFCSQG Trigger: TCCCTGACTGCAAAAGGAAGCCAAAACTGACAACAACGTCTCCTTCTCTACGGAGGTTTGTAGAAAGGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000367356.1 ENST00000636153.1 ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS CAA 72 bp | GACAGATCAGATCAAAGGCTGTTGCAACAATCCAGGTaGGATCCAGTCCAAACTAATGGTGTGATCCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: DRSDQRLLQQSR*DPVQTNGVILP Trigger: TGGCAGGATCACACCATTAGTTTGGACTGGATCCAACCTGGATTGTTGCAACAGCCTTTGATCTGATCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS CAA 90 bp | GGACTGGGACCCAGAGTTATCTATTTGCATTTCAACACCCTTCTTTaGTTTTCGGTCCCACAAGAGGCTCAACCAGTTCAAAAGCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: GLGPRVIYLHFNTLL*FSVPQEAQPVQKQV Trigger: TACCTGCTTTTGAACTGGTTGAGCCTCTTGTGGGACCGAAAACAAAAGAAGGGTGTTGAAATGCAAATAGATAACTCTGGGTCCCAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000367356.1 ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS CAA 90 bp | AACCTCCGTAGAGAAGGAGACGTTGTTGTCAGTTTTGGCTTCCTTTaGCAGTCAGGGACTGGGACCCAGAGTTATCTATTTGCATTTCAA | + |
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Preference number: 6 (lower is better) Translates to: NLRREGDVVVSFGFL*QSGTGTQSYLFAFQ Trigger: TTGAAATGCAAATAGATAACTCTGGGTCCCAGTCCCTGACTGCAAAAGGAAGCCAAAACTGACAACAACGTCTCCTTCTCTACGGAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000367356.1 ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS CCA 72 bp | TGTTGTCAGTTTTGGCTTCCTTTTGCAGTCAGGGACTaGGACCCAGAGTTATCTATTTGCATTTCAACACCC | + |
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Preference number: 6 (lower is better) Translates to: CCQFWLPFAVRD*DPELSICISTP Trigger: GGGTGTTGAAATGCAAATAGATAACTCTGGGTCCCAGTCCCTGACTGCAAAAGGAAGCCAAAACTGACAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000367356.1 ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS CAA 72 bp | AGAGAAGGAGACGTTGTTGTCAGTTTTGGCTTCCTTTaGCAGTCAGGGACTGGGACCCAGAGTTATCTATTT | + |
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Preference number: 6 (lower is better) Translates to: REGDVVVSFGFL*QSGTGTQSYLF Trigger: AAATAGATAACTCTGGGTCCCAGTCCCTGACTGCAAAAGGAAGCCAAAACTGACAACAACGTCTCCTTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000367356.1 ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS CAA 90 bp | CCTTGGGACTCCAGTCCACGAGAAGAAATACATCTTGTGAGATTTTaGTACAGCCTTTCTACAAACCTCCGTAGAGAAGGAGACGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: PWDSSPREEIHLVRF*YSLSTNLRREGDVV Trigger: AACAACGTCTCCTTCTCTACGGAGGTTTGTAGAAAGGCTGTACAAAAATCTCACAAGATGTATTTCTTCTCGTGGACTGGAGTCCCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000367356.1 ENST00000636153.1 ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS CCA 72 bp | CCGTGGTTTTTATGCAGAGGAGTCATAGGACCAGATTaGTATTTTAGTAATGCTCGTGCCAGGGTAGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: PWFLCRGVIGPD*YFSNARARVEN Trigger: ATTCTCTACCCTGGCACGAGCATTACTAAAATACCAATCTGGTCCTATGACTCCTCTGCATAAAAACCACGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS TCA 72 bp | CTTGGGACTCCAGTCCACGAGAAGAAATACATCTTGTaGGATTTTTGTACAGCCTTTCTACAAACCTCCGTA | + |
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Preference number: 6 (lower is better) Translates to: LGTPVHEKKYIL*DFCTAFLQTSV Trigger: TACGGAGGTTTGTAGAAAGGCTGTACAAAAATCTCACAAGATGTATTTCTTCTCGTGGACTGGAGTCCCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000367356.1 ENST00000636153.1 ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS CAA 72 bp | CCCAGAGTTATCTATTTGCATTTCAACACCCTTCTTTaGTTTTCGGTCCCACAAGAGGCTCAACCAGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: PRVIYLHFNTLL*FSVPQEAQPVQ Trigger: TTGAACTGGTTGAGCCTCTTGTGGGACCGAAAACAAAAGAAGGGTGTTGAAATGCAAATAGATAACTCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000367356.1 ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS GCA 72 bp | GTGTCTTCTCTTCTCCTGTCTCAAATCTCCCTATTCTaGAGAATAACTGAGCTGGACTCTTCAAAAATAGCA | + |
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Preference number: 6 (lower is better) Translates to: VSSLLLSQISLF*RITELDSSKIA Trigger: TGCTATTTTTGAAGAGTCCAGCTCAGTTATTCTGCAGAATAGGGAGATTTGAGACAGGAGAAGAGAAGACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367356.1 |
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| CDS CAA 72 bp | TCCAGTCCACGAGAAGAAATACATCTTGTGAGATTTTaGTACAGCCTTTCTACAAACCTCCGTAGAGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: SSPREEIHLVRF*YSLSTNLRREG Trigger: TCCTTCTCTACGGAGGTTTGTAGAAAGGCTGTACAAAAATCTCACAAGATGTATTTCTTCTCGTGGACTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000367356.1 ENST00000636153.1 ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS TCA 72 bp | GAATTGGGAAGCAGAACCACGATAAGCATCATAGATTaGAAGATCTATTATAGGACTTGGACATTACACGGT | + |
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Preference number: 6 (lower is better) Translates to: ELGSRTTISIID*KIYYRTWTLHG Trigger: ACCGTGTAATGTCCAAGTCCTATAATAGATCTTTCAATCTATGATGCTTATCGTGGTTCTGCTTCCCAATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636153.1 |
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| CDS CCA 72 bp | AGCCATGATAACTGGATGCAATGCCTGATTTTCAACTaGATCCATGAAGATAAAGAGATTCAATCCACATAC | + |
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Preference number: 6 (lower is better) Translates to: SHDNWMQCLIFN*IHEDKEIQSTY Trigger: GTATGTGGATTGAATCTCTTTATCTTCATGGATCCAGTTGAAAATCAGGCATTGCATCCAGTTATCATGGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367355.6 ENST00000669708.1 |
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| CDS TCA 72 bp | TCTCCTGTCTCAAATCTCCCTATTCTGCAGAATAACTaGGCTGGACTCTTCAAAAATAGCAGTATTAAGATA | + |
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Preference number: 6 (lower is better) Translates to: SPVSNLPILQNN*AGLFKNSSIKI Trigger: TATCTTAATACTGCTATTTTTGAAGAGTCCAGCTCAGTTATTCTGCAGAATAGGGAGATTTGAGACAGGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367356.1 |
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| CDS TCA 72 bp | GTAACGTCATCAAAACCTCACCTTGCTTATTTCATATaGGATGAAATCTGCTGTCTGGGTCATTTTGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: VTSSKPHLAYFI*DEICCLGHFAN Trigger: ATTTGCAAAATGACCCAGACAGCAGATTTCATCTCATATGAAATAAGCAAGGTGAGGTTTTGATGACGTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000637098.1 ENST00000656731.1 ENST00000669359.1 |
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| CDS CAA 72 bp | AATATTCACAGGAATTTACAGGTCACATTATTGCATTaGATTCTGAGAGCAACAGCCTCTGTCATTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: NIHRNLQVTLLH*ILRATASVISA Trigger: AGCAGAAATGACAGAGGCTGTTGCTCTCAGAATCAAATGCAATAATGTGACCTGTAAATTCCTGTGAATATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656731.1 ENST00000669359.1 |
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| CDS TCA 72 bp | AGCAAAGCCAAATCAACAGACATTCTGCAGAATAACTaGGCTGGACTCTTCAAAAATAGCAGTATTAAGATA | + |
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Preference number: 6 (lower is better) Translates to: SKAKSTDILQNN*AGLFKNSSIKI Trigger: TATCTTAATACTGCTATTTTTGAAGAGTCCAGCTCAGTTATTCTGCAGAATGTCTGTTGATTTGGCTTTGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367355.6 ENST00000669708.1 |
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| CDS TCA 72 bp | CAACATCAACAAAAACGTATAATCTGGATCTACTTATaGGGAAACAGCAAAGCCAAATCAACAGACATTCTG | + |
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Preference number: 6 (lower is better) Translates to: QHQQKRIIWIYL*GNSKAKSTDIL Trigger: CAGAATGTCTGTTGATTTGGCTTTGCTGTTTCCTCATAAGTAGATCCAGATTATACGTTTTTGTTGATGTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367355.6 ENST00000669708.1 |
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| CDS TCA 72 bp | ATTAAGATTAAAGCCATGATAACTGGATGCAATGCCTaGTTTTCAACTGGATCCAGAATAAGGTTGCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: IKIKAMITGCNA*FSTGSRIRLLC Trigger: ACAAAGCAACCTTATTCTGGATCCAGTTGAAAATCAGGCATTGCATCCAGTTATCATGGCTTTAATCTTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367356.1 |
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| CDS CAA 72 bp | TATCCAAATATTCACAGGAATTTACAGGTCACATTATaGCATTTGATTCTGAGAGCAACAGCCTCTGTCATT | + |
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Preference number: 6 (lower is better) Translates to: YPNIHRNLQVTL*HLILRATASVI Trigger: AATGACAGAGGCTGTTGCTCTCAGAATCAAATGCAATAATGTGACCTGTAAATTCCTGTGAATATTTGGATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656731.1 ENST00000669359.1 |
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| CDS TCA 72 bp | ATTAAGATTAAAGCCATGATAACTGGATGCAATGCCTaGTTTTCAACTGGATCCATGAAGATAAAGAGATTC | + |
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Preference number: 6 (lower is better) Translates to: IKIKAMITGCNA*FSTGSMKIKRF Trigger: GAATCTCTTTATCTTCATGGATCCAGTTGAAAATCAGGCATTGCATCCAGTTATCATGGCTTTAATCTTAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367355.6 ENST00000669708.1 |
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