Pregenerated sensors for LINC00861 (Homo sapiens)
Ensembl gene IDs: ENSG00000245164Ensembl transcript IDs: ENST00000500989.2, ENST00000517869.2, ENST00000518964.5, ENST00000522865.5, ENST00000651482.1, ENST00000651667.1, ENST00000652311.1, ENST00000661778.1, ENST00000662179.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCCTGGGAGAGCCATCGACAGGTAGCTGTCAGTTCAGGGTTGCCTTaGTGGCAGAGAGCTGACTCAGCCAAGTTCACCTCCCTTCTAGTC | + |
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Preference number: 5 (lower is better) Translates to: SWESHRQVAVSSGLP*WQRADSAKFTSLLV Trigger: GACTAGAAGGGAGGTGAACTTGGCTGAGTCAGCTCTCTGCCACCAAGGCAACCCTGAACTGACAGCTACCTGTCGATGGCTCTCCCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS CCA 90 bp | TGGGAGAGCCATCGACAGGTAGCTGTCAGTTCAGGGTTGCCTTGGTaGCAGAGAGCTGACTCAGCCAAGTTCACCTCCCTTCTAGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: WESHRQVAVSSGLPW*QRADSAKFTSLLVC Trigger: ACAGACTAGAAGGGAGGTGAACTTGGCTGAGTCAGCTCTCTGCCACCAAGGCAACCCTGAACTGACAGCTACCTGTCGATGGCTCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS GCA 90 bp | AGGCATGGGAAGGAAGTGCATCACATGCAAGTAAGTGAGCTAGGCTaGAAGGAGGTATGCCTCAGCCTCTTAGCTTTACTTGGGGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: RHGKEVHHMQVSELG*KEVCLSLLALLGVG Trigger: CCCCACCCCAAGTAAAGCTAAGAGGCTGAGGCATACCTCCTTGCAGCCTAGCTCACTTACTTGCATGTGATGCACTTCCTTCCCATGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS CCA 90 bp | TTTCCCCAGCCAAGGAGAGGCACAAGGAGTCCAATAAGGCAGCACTaGGTGAAGAAAGCAGGACCCAGAGGCAATGGGCATTTTGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: FPQPRRGTRSPIRQH*VKKAGPRGNGHFVQ Trigger: TTGGACAAAATGCCCATTGCCTCTGGGTCCTGCTTTCTTCACCCAGTGCTGCCTTATTGGACTCCTTGTGCCTCTCCTTGGCTGGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000500989.2 ENST00000517869.2 ENST00000522865.5 ENST00000651667.1 ENST00000661778.1 ENST00000662179.1 |
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| CDS CCA 90 bp | ATGGGTATTCACAGGGCAAGAAAGGCTATGTGTAAGAAGGTGGGGTaGGGTTGGGACAGGCAGGCATGGGAAGGAAGTGCATCACATGCA | + |
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Preference number: 5 (lower is better) Translates to: MGIHRARKAMCKKVG*GWDRQAWEGSASHA Trigger: TGCATGTGATGCACTTCCTTCCCATGCCTGCCTGTCCCAACCCCACCCCACCTTCTTACACATAGCCTTTCTTGCCCTGTGAATACCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS TCA 90 bp | TGGGACAGGCAGGCATGGGAAGGAAGTGCATCACATGCAAGTAAGTaGGCTAGGCTGCAAGGAGGTATGCCTCAGCCTCTTAGCTTTACT | + |
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Preference number: 5 (lower is better) Translates to: WDRQAWEGSASHASK*ARLQGGMPQPLSFT Trigger: AGTAAAGCTAAGAGGCTGAGGCATACCTCCTTGCAGCCTAGCTCACTTACTTGCATGTGATGCACTTCCTTCCCATGCCTGCCTGTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS TCA 90 bp | AACAGATGCCCACTCACTACTGCAACCCTATGTCTCCCCTTGCCATaGGAAAGCATCAGAGAACACATGGTCTTGACCTGCAGGGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: NRCPLTTATLCLPLP*ESIREHMVLTCREL Trigger: GAGCTCCCTGCAGGTCAAGACCATGTGTTCTCTGATGCTTTCTCATGGCAAGGGGAGACATAGGGTTGCAGTAGTGAGTGGGCATCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS GCA 90 bp | AGGACTGGTCCATGCGTCTACTTCTTCCTCCTCATAGACCCCATCTaGTGTGGGAAGTTAGGGCTTCACCCTGAGGCTCTGTATTTTCAA | + |
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Preference number: 5 (lower is better) Translates to: RTGPCVYFFLLIDPI*CGKLGLHPEALYFQ Trigger: TTGAAAATACAGAGCCTCAGGGTGAAGCCCTAACTTCCCACAGCAGATGGGGTCTATGAGGAGGAAGAAGTAGACGCATGGACCAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000517869.2 ENST00000651667.1 ENST00000652311.1 ENST00000661778.1 |
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| CDS CCA 90 bp | CATTTCCCACTCACAGGATGCCAGCTTCTGGGCCATAGGAGCTCATaGAGACAGAGTAGCACCATGAAACTTGTCTTCATAACAGGACTG | + |
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Preference number: 5 (lower is better) Translates to: HFPLTGCQLLGHRSS*RQSSTMKLVFITGL Trigger: CAGTCCTGTTATGAAGACAAGTTTCATGGTGCTACTCTGTCTCCATGAGCTCCTATGGCCCAGAAGCTGGCATCCTGTGAGTGGGAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517869.2 |
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| CDS CCA 90 bp | GCTTTTCCACTCACAGGATGCCAGCTTCTGGGCCATAGGAGCTCATaGAGACAGAGTAGCACCATGAAACTTGTCTTCATAACAGGACTG | + |
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Preference number: 5 (lower is better) Translates to: AFPLTGCQLLGHRSS*RQSSTMKLVFITGL Trigger: CAGTCCTGTTATGAAGACAAGTTTCATGGTGCTACTCTGTCTCCATGAGCTCCTATGGCCCAGAAGCTGGCATCCTGTGAGTGGAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS CCA 90 bp | ATCAACAGGGCACTCTGGAGCAAAGACTGCTCAACAGAAGAGACCTaGAAGGGCAGAAATGGCCCAGTCATAGGATTCCCACTACATACA | + |
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Preference number: 5 (lower is better) Translates to: INRALWSKDCSTEET*KGRNGPVIGFPLHT Trigger: TGTATGTAGTGGGAATCCTATGACTGGGCCATTTCTGCCCTTCCAGGTCTCTTCTGTTGAGCAGTCTTTGCTCCAGAGTGCCCTGTTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS CCA 90 bp | GTAGTACCACTCACAGGATGCCAGCTTCTGGGCCATAGGAGCTCATaGAGACAGAGTAGCACCATGAAACTTGTCTTCATAACAGGACTG | + |
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Preference number: 5 (lower is better) Translates to: VVPLTGCQLLGHRSS*RQSSTMKLVFITGL Trigger: CAGTCCTGTTATGAAGACAAGTTTCATGGTGCTACTCTGTCTCCATGAGCTCCTATGGCCCAGAAGCTGGCATCCTGTGAGTGGTACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652311.1 |
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| CDS CCA 90 bp | TTCTTGCCACTCACAGGATGCCAGCTTCTGGGCCATAGGAGCTCATaGAGACAGAGTAGCACCATGAAACTTGTCTTCATAACAGGACTG | + |
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Preference number: 5 (lower is better) Translates to: FLPLTGCQLLGHRSS*RQSSTMKLVFITGL Trigger: CAGTCCTGTTATGAAGACAAGTTTCATGGTGCTACTCTGTCTCCATGAGCTCCTATGGCCCAGAAGCTGGCATCCTGTGAGTGGCAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661778.1 |
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| CDS TCA 90 bp | AGACTGGTTACAGGTGACTTCCCAGGCATTTCTGGAGGGCTGAATTaGAGAAGGAATGCCAAGACTTTGAAGCCTTTCAGACTGTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: RLVTGDFPGISGGLN*RRNAKTLKPFRLSP Trigger: TGGGGACAGTCTGAAAGGCTTCAAAGTCTTGGCATTCCTTCTTCAATTCAGCCCTCCAGAAATGCCTGGGAAGTCACCTGTAACCAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517869.2 |
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| CDS TCA 90 bp | AAAATCAAGATGCTGTGTCTGTTGGGTCCTCTGGGAAGTAGACACTaGGATGGAGTTGGGGATACACGAGGTTTATTGGAGGGTAATGCC | + |
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Preference number: 5 (lower is better) Translates to: KIKMLCLLGPLGSRH*DGVGDTRGLLEGNA Trigger: GGCATTACCCTCCAATAAACCTCGTGTATCCCCAACTCCATCTCAGTGTCTACTTCCCAGAGGACCCAACAGACACAGCATCTTGATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS TCA 90 bp | AAGCAATCTTTTAACTTGTCTGTTTCTTTGACAGGATTGCTGCCATaGCTCAAAATGGGACCATGCCTTCAGATCTCCATCTGCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: KQSFNLSVSLTGLLP*LKMGPCLQISICST Trigger: GGTGGAGCAGATGGAGATCTGAAGGCATGGTCCCATTTTGAGTCATGGCAGCAATCCTGTCAAAGAAACAGACAAGTTAAAAGATTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS TCA 90 bp | CAGGCTGGATTAGATGCATCTATGGAGAAGTGCAAGAATCTGGGATaGTGCTCTTCCATTAATGCACCTTCTTTTACATTCCCCCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: QAGLDASMEKCKNLG*CSSINAPSFTFPQC Trigger: ACACTGGGGGAATGTAAAAGAAGGTGCATTAATGGAAGAGCATCATCCCAGATTCTTGCACTTCTCCATAGATGCATCTAATCCAGCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS TCA 90 bp | GTACACGCAGGGCCAGTTTCATGGGTGTGGAACCTGATTGAAATGTaGGAAGACATTATGAACATCCAACTTGACGAGACGAATTCCTTA | + |
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Preference number: 5 (lower is better) Translates to: VHAGPVSWVWNLIEM*EDIMNIQLDETNSL Trigger: TAAGGAATTCGTCTCGTCAAGTTGGATGTTCATAATGTCTTCTCACATTTCAATCAGGTTCCACACCCATGAAACTGGCCCTGCGTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS TCA 90 bp | ACTGCATTTCTTGAACTGAATGGCAAATTTTTCTTGACGGGAGTATaGATGGTACACGCAGGGCCAGTTTCATGGGTGTGGAACCTGATT | + |
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Preference number: 5 (lower is better) Translates to: TAFLELNGKFFLTGV*MVHAGPVSWVWNLI Trigger: AATCAGGTTCCACACCCATGAAACTGGCCCTGCGTGTACCATTCATACTCCCGTCAAGAAAAATTTGCCATTCAGTTCAAGAAATGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS TCA 90 bp | GTTTTACTGTCCTTCAGATCAGGCATCTTAGAAGTGGGATACCTGTaGATTTCTCTGGGAAGAGACATTATTGCCTTCACTGGGTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: VLLSFRSGILEVGYL*ISLGRDIIAFTGFS Trigger: TGAGAACCCAGTGAAGGCAATAATGTCTCTTCCCAGAGAAATTCACAGGTATCCCACTTCTAAGATGCCTGATCTGAAGGACAGTAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651482.1 |
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| CDS GCA 90 bp | GACATCTGCAGTTTGCAACTGACCACAGTGTTAAACCACATCATTTaGATTTGTTTACCCCTCCCTATAAAAGCCAAACTGCCTAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: DICSLQLTTVLNHII*ICLPLPIKAKLPKR Trigger: CCTCTTAGGCAGTTTGGCTTTTATAGGGAGGGGTAAACAAATGCAAATGATGTGGTTTAACACTGTGGTCAGTTGCAAACTGCAGATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS CCA 90 bp | CATCTTTTTGATTCAGAACACTTAGTGTGGAATGAGCCTTCCTCCTaGACTCGTGTAAGATTATCCTTGCATTTGGAGGGGAGGGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: HLFDSEHLVWNEPSS*TRVRLSLHLEGREK Trigger: TTTTTCCCTCCCCTCCAAATGCAAGGATAATCTTACACGAGTCCAGGAGGAAGGCTCATTCCACACTAAGTGTTCTGAATCAAAAAGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000517869.2 ENST00000518964.5 ENST00000522865.5 ENST00000651667.1 ENST00000652311.1 ENST00000661778.1 |
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| CDS GCA 90 bp | CTTAGAAGTGGGATACCTGTGAATTTCTCTGGGAAGAGACATTATTaGCTTCACTGGGTTCTCAGAATGCTTCAAGGCTGTTGTATATCT | + |
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Preference number: 5 (lower is better) Translates to: LRSGIPVNFSGKRHY*LHWVLRMLQGCCIS Trigger: AGATATACAACAGCCTTGAAGCATTCTGAGAACCCAGTGAAGGCAATAATGTCTCTTCCCAGAGAAATTCACAGGTATCCCACTTCTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651482.1 |
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| CDS CCA 90 bp | GGGATACCTGTGAATTTCTCTGGGAAGAGACATTATTGCCTTCACTaGGTTCTCAGAATGCTTCAAGGCTGTTGTATATCTTTCTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: GIPVNFSGKRHYCLH*VLRMLQGCCISFFC Trigger: ACAGAAGAAAGATATACAACAGCCTTGAAGCATTCTGAGAACCCAGTGAAGGCAATAATGTCTCTTCCCAGAGAAATTCACAGGTATCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651482.1 |
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| CDS TCA 90 bp | AACATGAAGGGTTTGAATGTTGTGCTATGTAGCATAGGCTTTCCTTaGAGGGCAATAGGGAGAGACAGAAAAATTTTGAACAGGTTGGTA | + |
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Preference number: 5 (lower is better) Translates to: NMKGLNVVLCSIGFP*RAIGRDRKILNRLV Trigger: TACCAACCTGTTCAAAATTTTTCTGTCTCTCCCTATTGCCCTTCAAGGAAAGCCTATGCTACATAGCACAACATTCAAACCCTTCATGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS CCA 90 bp | TTCTGTTTGATGTTATCTCTGTGTGAAACTATTCTAGAAGATCTTTaGTCAAGTGTGACAAGACCTACCACAAACTGTCCCCTTTCATCT | + |
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Preference number: 5 (lower is better) Translates to: FCLMLSLCETILEDL*SSVTRPTTNCPLSS Trigger: AGATGAAAGGGGACAGTTTGTGGTAGGTCTTGTCACACTTGACCAAAGATCTTCTAGAATAGTTTCACACAGAGATAACATCAAACAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS CAA 72 bp | TGGGAGAGCCATCGACAGGTAGCTGTCAGTTCAGGGTaGCCTTGGTGGCAGAGAGCTGACTCAGCCAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: WESHRQVAVSSG*PWWQRADSAKF Trigger: GAACTTGGCTGAGTCAGCTCTCTGCCACCAAGGCAACCCTGAACTGACAGCTACCTGTCGATGGCTCTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS GCA 72 bp | CCATGCGTCTACTTCTTCCTCCTCATAGACCCCATCTaGTGTGGGAAGTTAGGGCTTCACCCTGAGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PCVYFFLLIDPI*CGKLGLHPEAL Trigger: CAGAGCCTCAGGGTGAAGCCCTAACTTCCCACAGCAGATGGGGTCTATGAGGAGGAAGAAGTAGACGCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000517869.2 ENST00000651667.1 ENST00000652311.1 ENST00000661778.1 |
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| CDS CCA 72 bp | CATCGACAGGTAGCTGTCAGTTCAGGGTTGCCTTGGTaGCAGAGAGCTGACTCAGCCAAGTTCACCTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: HRQVAVSSGLPW*QRADSAKFTSL Trigger: AAGGGAGGTGAACTTGGCTGAGTCAGCTCTCTGCCACCAAGGCAACCCTGAACTGACAGCTACCTGTCGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS CAA 72 bp | CCCAGTCATAGGATTCCCACTACATACACTTCATCGTaGGCTGAGACCTGGCTGGGACAAGCTTGGCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: PSHRIPTTYTSS*AETWLGQAWRW Trigger: CCAACGCCAAGCTTGTCCCAGCCAGGTCTCAGCCAACGATGAAGTGTATGTAGTGGGAATCCTATGACTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS GCA 72 bp | CTTATAGTGCTCCAGGCACTGCCTTCTGAGAACAGATaGCCACTCACTACTGCAACCCTATGTCTCCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LIVLQALPSENR*PLTTATLCLPL Trigger: CAAGGGGAGACATAGGGTTGCAGTAGTGAGTGGGCATCTGTTCTCAGAAGGCAGTGCCTGGAGCACTATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS GCA 72 bp | TCTTTGACCAAGAGAGGACATTTCCCACTCACAGGATaGCAGCTTCTGGGCCATAGGAGCTCATGGAGACAG | + |
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Preference number: 6 (lower is better) Translates to: SLTKRGHFPLTG*QLLGHRSSWRQ Trigger: CTGTCTCCATGAGCTCCTATGGCCCAGAAGCTGGCATCCTGTGAGTGGGAAATGTCCTCTCTTGGTCAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517869.2 |
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| CDS CCA 72 bp | GCACTCTGGAGCAAAGACTGCTCAACAGAAGAGACCTaGAAGGGCAGAAATGGCCCAGTCATAGGATTCCCA | + |
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Preference number: 6 (lower is better) Translates to: ALWSKDCSTEET*KGRNGPVIGFP Trigger: TGGGAATCCTATGACTGGGCCATTTCTGCCCTTCCAGGTCTCTTCTGTTGAGCAGTCTTTGCTCCAGAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS TCA 72 bp | CCACTCACTACTGCAACCCTATGTCTCCCCTTGCCATaGGAAAGCATCAGAGAACACATGGTCTTGACCTGC | + |
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Preference number: 6 (lower is better) Translates to: PLTTATLCLPLP*ESIREHMVLTC Trigger: GCAGGTCAAGACCATGTGTTCTCTGATGCTTTCTCATGGCAAGGGGAGACATAGGGTTGCAGTAGTGAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS TCA 72 bp | GGAGAAGGGTGTAGCATTAGACAGAGCAGCTCTCTTTaGCCAAGAGAGGACATTTCCCACTCACAGGATGCC | + |
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Preference number: 6 (lower is better) Translates to: GEGCSIRQSSSL*PREDISHSQDA Trigger: GGCATCCTGTGAGTGGGAAATGTCCTCTCTTGGTCAAAGAGAGCTGCTCTGTCTAATGCTACACCCTTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517869.2 |
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| CDS GCA 72 bp | GAAGCGGGATTAGGCAAGGAGAACTTCAGACCAGGATaGCGATCTGACTATGGCTCAGTCAAATCAACAGGG | + |
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Preference number: 6 (lower is better) Translates to: EAGLGKENFRPG*RSDYGSVKSTG Trigger: CCCTGTTGATTTGACTGAGCCATAGTCAGATCGGCATCCTGGTCTGAAGTTCTCCTTGCCTAATCCCGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS TCA 72 bp | ATTAGGCAAGGAGAACTTCAGACCAGGATGCCGATCTaGCTATGGCTCAGTCAAATCAACAGGGCACTCTGG | + |
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Preference number: 6 (lower is better) Translates to: IRQGELQTRMPI*LWLSQINRALW Trigger: CCAGAGTGCCCTGTTGATTTGACTGAGCCATAGTCAGATCGGCATCCTGGTCTGAAGTTCTCCTTGCCTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS TCA 72 bp | ATGCTGTGTCTGTTGGGTCCTCTGGGAAGTAGACACTaGGATGGAGTTGGGGATACACGAGGTTTATTGGAG | + |
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Preference number: 6 (lower is better) Translates to: MLCLLGPLGSRH*DGVGDTRGLLE Trigger: CTCCAATAAACCTCGTGTATCCCCAACTCCATCTCAGTGTCTACTTCCCAGAGGACCCAACAGACACAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS CCA 72 bp | CTCACAGGATGCCAGCTTCTGGGCCATAGGAGCTCATaGAGACAGAGTAGCACCATGAAACTTGTCTTCATA | + |
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Preference number: 6 (lower is better) Translates to: LTGCQLLGHRSS*RQSSTMKLVFI Trigger: TATGAAGACAAGTTTCATGGTGCTACTCTGTCTCCATGAGCTCCTATGGCCCAGAAGCTGGCATCCTGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000517869.2 ENST00000651667.1 ENST00000652311.1 ENST00000661778.1 |
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| CDS TCA 72 bp | GCTGGGACAAGCTTGGCGTTGGCTCAAAAGCTGAAATaGATCCTAAACAGGCTGCAACCGAAGACTGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: AGTSLALAQKLK*ILNRLQPKTVN Trigger: ATTGACAGTCTTCGGTTGCAGCCTGTTTAGGATTCATTTCAGCTTTTGAGCCAACGCCAAGCTTGTCCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS GCA 72 bp | CACCATGAAACTTGTCTTCATAACAGGACTGGTCCATaGGTCTACTTCTTCCTCCTCATAGACCCCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: HHETCLHNRTGP*VYFFLLIDPIC Trigger: GCAGATGGGGTCTATGAGGAGGAAGAAGTAGACGCATGGACCAGTCCTGTTATGAAGACAAGTTTCATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000517869.2 ENST00000651667.1 ENST00000652311.1 ENST00000661778.1 |
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| CDS CCA 72 bp | GATCTCCATCTGCTCCACCCAGGTAATAAGGACACTTaGAGCCTTCATGCTCCATTTGTGACTGGCAATACA | + |
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Preference number: 6 (lower is better) Translates to: DLHLLHPGNKDT*SLHAPFVTGNT Trigger: TGTATTGCCAGTCACAAATGGAGCATGAAGGCTCCAAGTGTCCTTATTACCTGGGTGGAGCAGATGGAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS CCA 72 bp | AGACTGCTCAACAGAAGAGACCTGGAAGGGCAGAAATaGCCCAGTCATAGGATTCCCACTACATACACTTCA | + |
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Preference number: 6 (lower is better) Translates to: RLLNRRDLEGQK*PSHRIPTTYTS Trigger: TGAAGTGTATGTAGTGGGAATCCTATGACTGGGCCATTTCTGCCCTTCCAGGTCTCTTCTGTTGAGCAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS CAA 72 bp | CCTGGGAAGAGATGCTTATGGAAAATGGAAGGGGATTaGATGCTAAGAGCTGGTATGTGTGTGTGTGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: PGKRCLWKMEGD*MLRAGMCVCGG Trigger: CCCACCACACACACACATACCAGCTCTTAGCATCAAATCCCCTTCCATTTTCCATAAGCATCTCTTCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000500989.2 ENST00000651482.1 |
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| CDS TCA 72 bp | GTAATAAGGACACTTGGAGCCTTCATGCTCCATTTGTaGCTGGCAATACAGGGACCTAAAGGTGAGCCCTAT | + |
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Preference number: 6 (lower is better) Translates to: VIRTLGAFMLHL*LAIQGPKGEPY Trigger: ATAGGGCTCACCTTTAGGTCCCTGTATTGCCAGTCACAAATGGAGCATGAAGGCTCCAAGTGTCCTTATTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS TCA 72 bp | AGACCCCATCTGCTGTGGGAAGTTAGGGCTTCACCCTaGGGCTCTGTATTTTCAACTGTGAGTAAAGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: RPHLLWEVRASP*GSVFSTVSKGF Trigger: AAAACCTTTACTCACAGTTGAAAATACAGAGCCTCAGGGTGAAGCCCTAACTTCCCACAGCAGATGGGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000517869.2 ENST00000651667.1 ENST00000652311.1 ENST00000661778.1 |
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| CDS TCA 72 bp | CTTGAACTGAATGGCAAATTTTTCTTGACGGGAGTATaGATGGTACACGCAGGGCCAGTTTCATGGGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LELNGKFFLTGV*MVHAGPVSWVW Trigger: CCACACCCATGAAACTGGCCCTGCGTGTACCATTCATACTCCCGTCAAGAAAAATTTGCCATTCAGTTCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS GCA 72 bp | AAGGAAGTGCATCACATGCAAGTAAGTGAGCTAGGCTaGAAGGAGGTATGCCTCAGCCTCTTAGCTTTACTT | + |
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Preference number: 6 (lower is better) Translates to: KEVHHMQVSELG*KEVCLSLLALL Trigger: AAGTAAAGCTAAGAGGCTGAGGCATACCTCCTTGCAGCCTAGCTCACTTACTTGCATGTGATGCACTTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS CCA 72 bp | GATTCAGAACACTTAGTGTGGAATGAGCCTTCCTCCTaGACTCGTGTAAGATTATCCTTGCATTTGGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: DSEHLVWNEPSS*TRVRLSLHLEG Trigger: CCCCTCCAAATGCAAGGATAATCTTACACGAGTCCAGGAGGAAGGCTCATTCCACACTAAGTGTTCTGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000517869.2 ENST00000518964.5 ENST00000522865.5 ENST00000651667.1 ENST00000652311.1 ENST00000661778.1 |
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| CDS CAA 72 bp | CAAGGACAGTTTAATCGCCCTATCGGTCCTCCACTCTaGTTCAAGAAAGGCTCAGAAAAGGTGTCCTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: QGQFNRPIGPPL*FKKGSEKVSLN Trigger: GTTCAAGGACACCTTTTCTGAGCCTTTCTTGAACAAGAGTGGAGGACCGATAGGGCGATTAAACTGTCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000500989.2 ENST00000517869.2 ENST00000518964.5 ENST00000651482.1 ENST00000651667.1 ENST00000652311.1 ENST00000662179.1 |
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| CDS CAA 72 bp | CACCTCCCTTCTAGTCTGTCCACTTCCAAAAGTGAGTaGTCATTCCATCAAAGCACTCCTGGTTTGCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: HLPSSLSTSKSE*SFHQSTPGLLL Trigger: GAGAAGCAAACCAGGAGTGCTTTGATGGAATGACAACTCACTTTTGGAAGTGGACAGACTAGAAGGGAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS CAA 90 bp | AAGTTGTGTCAAGGACAGTTTAATCGCCCTATCGGTCCTCCACTCTaGTTCAAGAAAGGCTCAGAAAAGGTGTCCTTGAACAGAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: KLCQGQFNRPIGPPL*FKKGSEKVSLNRET Trigger: TGTCTCTCTGTTCAAGGACACCTTTTCTGAGCCTTTCTTGAACAAGAGTGGAGGACCGATAGGGCGATTAAACTGTCCTTGACACAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000500989.2 ENST00000517869.2 ENST00000518964.5 ENST00000651482.1 ENST00000651667.1 ENST00000652311.1 ENST00000662179.1 |
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| CDS TCA 72 bp | GGGCCAGTTTCATGGGTGTGGAACCTGATTGAAATGTaGGAAGACATTATGAACATCCAACTTGACGAGACG | + |
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Preference number: 6 (lower is better) Translates to: GPVSWVWNLIEM*EDIMNIQLDET Trigger: CGTCTCGTCAAGTTGGATGTTCATAATGTCTTCTCACATTTCAATCAGGTTCCACACCCATGAAACTGGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS GCA 72 bp | GGGATACCTGTGAATTTCTCTGGGAAGAGACATTATTaGCTTCACTGGGTTCTCAGAATGCTTCAAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GIPVNFSGKRHY*LHWVLRMLQGC Trigger: ACAGCCTTGAAGCATTCTGAGAACCCAGTGAAGGCAATAATGTCTCTTCCCAGAGAAATTCACAGGTATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651482.1 |
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| CDS CCA 72 bp | TCCTTCAGATCAGGCATCTTAGAAGTGGGATACCTGTaGAAAGTTGAGGGGAAATCAACAAAACCCTGCGAA | + |
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Preference number: 6 (lower is better) Translates to: SFRSGILEVGYL*KVEGKSTKPCE Trigger: TTCGCAGGGTTTTGTTGATTTCCCCTCAACTTTCCACAGGTATCCCACTTCTAAGATGCCTGATCTGAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518964.5 |
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| CDS CAA 72 bp | TGGGATACCTGTGAATTTCTCTGGGAAGAGACATTATaGCCTTCACTGGGTTCTCAGAATGCTTCAAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: WDTCEFLWEETL*PSLGSQNASRL Trigger: CAGCCTTGAAGCATTCTGAGAACCCAGTGAAGGCAATAATGTCTCTTCCCAGAGAAATTCACAGGTATCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651482.1 |
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| CDS CAA 90 bp | AGCCAAGTTCACCTCCCTTCTAGTCTGTCCACTTCCAAAAGTGAGTaGTCATTCCATCAAAGCACTCCTGGTTTGCTTCTCTTAAAACCT | + |
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Preference number: 6 (lower is better) Translates to: SQVHLPSSLSTSKSE*SFHQSTPGLLLLKP Trigger: AGGTTTTAAGAGAAGCAAACCAGGAGTGCTTTGATGGAATGACAACTCACTTTTGGAAGTGGACAGACTAGAAGGGAGGTGAACTTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS CAA 90 bp | TCTATTTTGATTGTGCTAATACCTAGTCCAATGATTGCAGATGGGTaGCTTCAGTGTCCAAGGATATGTGGAGTGGTGGTTTTCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: SILIVLIPSPMIADG*LQCPRICGVVVFCT Trigger: GGTGCAGAAAACCACCACTCCACATATCCTTGGACACTGAAGCAACCCATCTGCAATCATTGGACTAGGTATTAGCACAATCAAAATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652311.1 |
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| CDS TCA 72 bp | TTTAACTTGTCTGTTTCTTTGACAGGATTGCTGCCATaGCTCAAAATGGGACCATGCCTTCAGATCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: FNLSVSLTGLLP*LKMGPCLQISI Trigger: GATGGAGATCTGAAGGCATGGTCCCATTTTGAGTCATGGCAGCAATCCTGTCAAAGAAACAGACAAGTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS TCA 72 bp | TCCTTCAGATCAGGCATCTTAGAAGTGGGATACCTGTaGATTTCTCTGGGAAGAGACATTATTGCCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: SFRSGILEVGYL*ISLGRDIIAFT Trigger: AGTGAAGGCAATAATGTCTCTTCCCAGAGAAATTCACAGGTATCCCACTTCTAAGATGCCTGATCTGAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651482.1 |
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| CDS GCA 72 bp | TTTCCTAGAAAGACTCCTAGAACAGGCTGGATTAGATaGATCTATGGAGAAGTGCAAGAATCTGGGATGATG | + |
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Preference number: 6 (lower is better) Translates to: FPRKTPRTGWIR*IYGEVQESGMM Trigger: CATCATCCCAGATTCTTGCACTTCTCCATAGATGCATCTAATCCAGCCTGTTCTAGGAGTCTTTCTAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS CAA 72 bp | CTACTCTCTTCTAGATTCTCAGTTGAAGCTCTAAAGTaGTGTCAAGGACAGTTTAATCGCCCTATCGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLSSRFSVEALK*CQGQFNRPIGP Trigger: AGGACCGATAGGGCGATTAAACTGTCCTTGACACAACTTTAGAGCTTCAACTGAGAATCTAGAAGAGAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000517869.2 ENST00000518964.5 ENST00000651667.1 ENST00000652311.1 ENST00000662179.1 |
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| CDS CAA 90 bp | TTTTTCCATCTACTCTCTTCTAGATTCTCAGTTGAAGCTCTAAAGTaGTGTCAAGGACAGTTTAATCGCCCTATCGGTCCTCCACTCTTG | + |
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Preference number: 6 (lower is better) Translates to: FFHLLSSRFSVEALK*CQGQFNRPIGPPLL Trigger: CAAGAGTGGAGGACCGATAGGGCGATTAAACTGTCCTTGACACAACTTTAGAGCTTCAACTGAGAATCTAGAAGAGAGTAGATGGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000517869.2 ENST00000518964.5 ENST00000651667.1 ENST00000652311.1 ENST00000662179.1 |
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| CDS TCA 72 bp | TTATCCACTGAAAAAGACTCTTCCCTTGACCAAACTTaGGTTAGGCTCCTTGGAGCATTCTTCCTAAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: LSTEKDSSLDQT*VRLLGAFFLSR Trigger: TCTACTTAGGAAGAATGCTCCAAGGAGCCTAACTCAAGTTTGGTCAAGGGAAGAGTCTTTTTCAGTGGATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS TCA 72 bp | GGCTGCAACCGAAGACTGTCAATTAACTGCATTTCTTaGACTGAATGGCAAATTTTTCTTGACGGGAGTATG | + |
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Preference number: 6 (lower is better) Translates to: GCNRRLSINCIS*TEWQIFLDGSM Trigger: CATACTCCCGTCAAGAAAAATTTGCCATTCAGTTCAAGAAATGCAGTTAATTGACAGTCTTCGGTTGCAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000651667.1 |
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| CDS TCA 72 bp | CAGTGGAACGAAAAGAGCCCTTTTTATAGGAACAAGTaGGTTATGTATTTCTGTGTTATGCCTGGTCTATGG | + |
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Preference number: 6 (lower is better) Translates to: QWNEKSPFYRNK*VMYFCVMPGLW Trigger: CCATAGACCAGGCATAACACAGAAATACATAACTCACTTGTTCCTATAAAAAGGGCTCTTTTCGTTCCACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS TCA 72 bp | GGTTTGAATGTTGTGCTATGTAGCATAGGCTTTCCTTaGAGGGCAATAGGGAGAGACAGAAAAATTTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: GLNVVLCSIGFP*RAIGRDRKILN Trigger: GTTCAAAATTTTTCTGTCTCTCCCTATTGCCCTTCAAGGAAAGCCTATGCTACATAGCACAACATTCAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS GCA 72 bp | AGTTTGCAACTGACCACAGTGTTAAACCACATCATTTaGATTTGTTTACCCCTCCCTATAAAAGCCAAACTG | + |
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Preference number: 6 (lower is better) Translates to: SLQLTTVLNHII*ICLPLPIKAKL Trigger: CAGTTTGGCTTTTATAGGGAGGGGTAAACAAATGCAAATGATGTGGTTTAACACTGTGGTCAGTTGCAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS GCA 72 bp | ACCACAATAGTTTCTTTAACTCTTGTGCTCATTCATTaGAGGAACACCACACTTCCTTCTAGTAGTACCACT | + |
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Preference number: 6 (lower is better) Translates to: TTIVSLTLVLIH*RNTTLPSSSTT Trigger: AGTGGTACTACTAGAAGGAAGTGTGGTGTTCCTGCAATGAATGAGCACAAGAGTTAAAGAAACTATTGTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652311.1 |
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| CDS CAA 72 bp | CAGTTTGCAACTGACCACAGTGTTAAACCACATCATTaGCATTTGTTTACCCCTCCCTATAAAAGCCAAACT | + |
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Preference number: 6 (lower is better) Translates to: QFATDHSVKPHH*HLFTPPYKSQT Trigger: AGTTTGGCTTTTATAGGGAGGGGTAAACAAATGCAAATGATGTGGTTTAACACTGTGGTCAGTTGCAAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS CAA 72 bp | TGTTTTGGAAAGTTAACAAACTGTGACATCTGCAGTTaGCAACTGACCACAGTGTTAAACCACATCATTTGC | + |
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Preference number: 6 (lower is better) Translates to: CFGKLTNCDICS*QLTTVLNHIIC Trigger: GCAAATGATGTGGTTTAACACTGTGGTCAGTTGCAAACTGCAGATGTCACAGTTTGTTAACTTTCCAAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS CAA 72 bp | TTCCATACAGAAACCTCTCTCTCCTACTGCAGCAGTTaGAATAAGATCTATCTGGCTGTTTTAATACATATC | + |
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Preference number: 6 (lower is better) Translates to: FHTETSLSYCSS*NKIYLAVLIHI Trigger: GATATGTATTAAAACAGCCAGATAGATCTTATTCAAACTGCTGCAGTAGGAGAGAGAGGTTTCTGTATGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS TCA 72 bp | AAACATCTCCAAATGTTTTGGAAAGTTAACAAACTGTaGCATCTGCAGTTTGCAACTGACCACAGTGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: KHLQMFWKVNKL*HLQFATDHSVK Trigger: TTTAACACTGTGGTCAGTTGCAAACTGCAGATGTCACAGTTTGTTAACTTTCCAAAACATTTGGAGATGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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| CDS GCA 72 bp | GTTTGCAGATATTGTGTCTCTGTTACGTCAGAAAGATaGCAGAAAATTGGGTTTGTTATTTTTGTTCGTCTA | + |
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Preference number: 6 (lower is better) Translates to: VCRYCVSVTSER*QKIGFVIFVRL Trigger: TAGACGAACAAAAATAACAAACCCAATTTTCTGGCATCTTTCTGACGTAACAGAGACACAATATCTGCAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000500989.2 |
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