Pregenerated sensors for LINC00858 (Homo sapiens)
Ensembl gene IDs: ENSG00000229404Ensembl transcript IDs: ENST00000415469.5, ENST00000437892.1, ENST00000653603.1, ENST00000661042.1, ENST00000661556.1, ENST00000661758.1, ENST00000663433.1, ENST00000666427.1, ENST00000669640.1
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCTTGCAGCATCTGGGGTGCAGCAAGCAGGGTGAAGGGGGAGACTaGCTTAGAATGGAGGGTGGCAGCTCCAAGGAATGGGAAAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: ALQHLGCSKQGEGGD*LRMEGGSSKEWESF Trigger: GAAGCTTTCCCATTCCTTGGAGCTGCCACCCTCCATTCTAAGGCAGTCTCCCCCTTCACCCTGCTTGCTGCACCCCAGATGCTGCAAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000415469.5 ENST00000661758.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS CCA 90 bp | ACAGCACGCCCACAAAGGACCATGCTCAGCTGTCATCTTCAAGTGTaGGAGCAGCTTCCCTCCAAGCCCTGGGCAAGAGGCCACAAGATC | + |
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Preference number: 5 (lower is better) Translates to: TARPQRTMLSCHLQV*EQLPSKPWARGHKI Trigger: GATCTTGTGGCCTCTTGCCCAGGGCTTGGAGGGAAGCTGCTCCCACACTTGAAGATGACAGCTGAGCATGGTCCTTTGTGGGCGTGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000415469.5 ENST00000661556.1 ENST00000661758.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS TCA 90 bp | TCTGAGGAGTGTCATGAAGACTGCAACAGGGAAGGCTTGGGGCCCTaGGGCCAAGTCCGTCATGTCATTCCAGCTCCCCTTCAGGGAATG | + |
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Preference number: 5 (lower is better) Translates to: SEECHEDCNREGLGP*GQVRHVIPAPLQGM Trigger: CATTCCCTGAAGGGGAGCTGGAATGACATGACGGACTTGGCCTCAGGGCCCCAAGCCTTCCCTGTTGCAGTCTTCATGACACTCCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000415469.5 ENST00000661556.1 ENST00000661758.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS GCA 90 bp | GTAATCACAGAGCTGGAGCACCTCTCTAAGAACCAGCTGGGGCTCTaGAGGGGTGTGACAAGTGCTCATCCGGATGAGGGACTCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: VITELEHLSKNQLGL*RGVTSAHPDEGLTE Trigger: CTCTGTGAGTCCCTCATCCGGATGAGCACTTGTCACACCCCTGCAGAGCCCCAGCTGGTTCTTAGAGAGGTGCTCCAGCTCTGTGATTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000415469.5 ENST00000661556.1 ENST00000661758.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS CCA 90 bp | ATCTGGGGTGCAGCAAGCAGGGTGAAGGGGGAGACTGCCTTAGAATaGAGGGTGGCAGCTCCAAGGAATGGGAAAGCTTCTCAATCCCTT | + |
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Preference number: 5 (lower is better) Translates to: IWGAASRVKGETALE*RVAAPRNGKASQSL Trigger: AAGGGATTGAGAAGCTTTCCCATTCCTTGGAGCTGCCACCCTCCATTCTAAGGCAGTCTCCCCCTTCACCCTGCTTGCTGCACCCCAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000415469.5 ENST00000661758.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS CCA 90 bp | GCCAGCTGGGCCTCCAGTCACCTGAACAAAGTTGTGCCACTCACATaGTCGGCAAATTCGTGGTGGCTATTGTCAGGAAGCCTCAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: ASWASSHLNKVVPLT*SANSWWLLSGSLKS Trigger: GGACTTGAGGCTTCCTGACAATAGCCACCACGAATTTGCCGACCATGTGAGTGGCACAACTTTGTTCAGGTGACTGGAGGCCCAGCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653603.1 ENST00000669640.1 |
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| CDS GCA 90 bp | TGGCCAAGCCTAACTCAGATGGAAATGCAGAAATCACCCGTCTTCTaGGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTGTTCCTATTC | + |
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Preference number: 5 (lower is better) Translates to: WPSLTQMEMQKSPVF*VAHAGSCRPELFLF Trigger: GAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGTTAGGCTTGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000415469.5 ENST00000653603.1 |
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| CDS CCA 90 bp | TCTGAAGTACTGAAGTCAAAAACAGCACATGGGCCTTGCAGCATCTaGGGTGCAGCAAGCAGGGTGAAGGGGGAGACTGCCTTAGAATGG | + |
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Preference number: 5 (lower is better) Translates to: SEVLKSKTAHGPCSI*GAASRVKGETALEW Trigger: CCATTCTAAGGCAGTCTCCCCCTTCACCCTGCTTGCTGCACCCCAGATGCTGCAAGGCCCATGTGCTGTTTTTGACTTCAGTACTTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000415469.5 ENST00000661758.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS CCA 90 bp | CCAATGGGATCATTCAGCACTAGGACTAGGACAGCACTGGCTCTCTaGGTTTCCCTGTTCCAATTCTGTGGCACAACTTCTGGCCATGGT | + |
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Preference number: 5 (lower is better) Translates to: PMGSFSTRTRTALAL*VSLFQFCGTTSGHG Trigger: ACCATGGCCAGAAGTTGTGCCACAGAATTGGAACAGGGAAACCCAGAGAGCCAGTGCTGTCCTAGTCCTAGTGCTGAATGATCCCATTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415469.5 |
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| CDS TCA 90 bp | TCTTATGAAATAGCAGGCAAAATGCCAGCTGGGCCTCCAGTCACCTaGACAAAGTTGTGCCACTCACATGGTCGGCAAATTCGTGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: SYEIAGKMPAGPPVT*TKLCHSHGRQIRGG Trigger: GCCACCACGAATTTGCCGACCATGTGAGTGGCACAACTTTGTTCAGGTGACTGGAGGCCCAGCTGGCATTTTGCCTGCTATTTCATAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653603.1 ENST00000669640.1 |
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| CDS TCA 90 bp | AGGCTTGGTGGGTACCCCAAAAGAGGTTTGGCTTGGTACAGATCATaGGTTGAGGCCATGATATCCTCCTGTCTGGTAAGGAATGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: RLGGYPKRGLAWYRS*VEAMISSCLVRNGS Trigger: GGAACCATTCCTTACCAGACAGGAGGATATCATGGCCTCAACTCATGATCTGTACCAAGCCAAACCTCTTTTGGGGTACCCACCAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000415469.5 ENST00000661556.1 ENST00000661758.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS TCA 90 bp | CAGCAGATTCAGTGTCTGGTAAGGGCCAATTTTCTGGTTCGTGGATaGTGCTTCCTGGCTGTGTCCTCATATGATGGAAAAGGTGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: QQIQCLVRANFLVRG*CFLAVSSYDGKGEG Trigger: CCCCTCACCTTTTCCATCATATGAGGACACAGCCAGGAAGCATCATCCACGAACCAGAAAATTGGCCCTTACCAGACACTGAATCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000415469.5 ENST00000661758.1 ENST00000666427.1 |
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| CDS TCA 90 bp | AGACTTAGTTGGCTCTGTTGGATGGTTCTGGCTTGGAGTCTCTTATaGAATAGCAGGCAAAATGCCAGCTGGGCCTCCAGTCACCTGAAC | + |
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Preference number: 5 (lower is better) Translates to: RLSWLCWMVLAWSLL*NSRQNASWASSHLN Trigger: GTTCAGGTGACTGGAGGCCCAGCTGGCATTTTGCCTGCTATTTCATAAGAGACTCCAAGCCAGAACCATCCAACAGAGCCAACTAAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653603.1 ENST00000669640.1 |
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| CDS TCA 90 bp | TGGTGGGTACCCCAAAAGAGGTTTGGCTTGGTACAGATCATGAGTTaGGGCCATGATATCCTCCTGTCTGGTAAGGAATGGTTCCAGACA | + |
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Preference number: 5 (lower is better) Translates to: WWVPQKRFGLVQIMS*GHDILLSGKEWFQT Trigger: TGTCTGGAACCATTCCTTACCAGACAGGAGGATATCATGGCCTCAACTCATGATCTGTACCAAGCCAAACCTCTTTTGGGGTACCCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000415469.5 ENST00000661556.1 ENST00000661758.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS CCA 90 bp | GGCCAGGAATTTGGAAGAGACTTAGTTGGCTCTGTTGGATGGTTCTaGCTTGGAGTCTCTTATGAAATAGCAGGCAAAATGCCAGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: GQEFGRDLVGSVGWF*LGVSYEIAGKMPAG Trigger: CCCAGCTGGCATTTTGCCTGCTATTTCATAAGAGACTCCAAGCCAGAACCATCCAACAGAGCCAACTAAGTCTCTTCCAAATTCCTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653603.1 ENST00000669640.1 |
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| CDS CCA 90 bp | TCTTTGGGCCAGGAATTTGGAAGAGACTTAGTTGGCTCTGTTGGATaGTTCTGGCTTGGAGTCTCTTATGAAATAGCAGGCAAAATGCCA | + |
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Preference number: 5 (lower is better) Translates to: SLGQEFGRDLVGSVG*FWLGVSYEIAGKMP Trigger: TGGCATTTTGCCTGCTATTTCATAAGAGACTCCAAGCCAGAACCATCCAACAGAGCCAACTAAGTCTCTTCCAAATTCCTGGCCCAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653603.1 ENST00000669640.1 |
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| CDS TCA 90 bp | CCTCACAGCTCTTCACTGGAGCCTTTTGCCCAACTGAACCATTTGTaGTGGAATCACCAGATAAGCAGATTAAAGAACTACTCAGACTGT | + |
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Preference number: 5 (lower is better) Translates to: PHSSSLEPFAQLNHL*WNHQISRLKNYSDC Trigger: ACAGTCTGAGTAGTTCTTTAATCTGCTTATCTGGTGATTCCATCACAAATGGTTCAGTTGGGCAAAAGGCTCCAGTGAAGAGCTGTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415469.5 |
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| CDS TCA 90 bp | AGGAAGCCTCAAGTCCCAATCACATGGACTTCACAGAGGGCCACTTaGATGTTTTCACAATGTGAAAAGATAAACAACAGCCTTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: RKPQVPITWTSQRAT*MFSQCEKINNSLLQ Trigger: CTGGAGAAGGCTGTTGTTTATCTTTTCACATTGTGAAAACATTCAAGTGGCCCTCTGTGAAGTCCATGTGATTGGGACTTGAGGCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653603.1 ENST00000669640.1 |
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| CDS TCA 90 bp | GACTCCTCTAAAGGCAGTTGTCTCTGGAAGTATCTGAACCATTTGTaGTGGAATCACCAGATAAGCAGATTAAAGAACTACTCAGACTGT | + |
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Preference number: 5 (lower is better) Translates to: DSSKGSCLWKYLNHL*WNHQISRLKNYSDC Trigger: ACAGTCTGAGTAGTTCTTTAATCTGCTTATCTGGTGATTCCATCACAAATGGTTCAGATACTTCCAGAGACAACTGCCTTTAGAGGAGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653603.1 ENST00000669640.1 |
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| CDS TCA 90 bp | GGAGGAATCTTGAAAGCTGACTACCATGATTGTACAGAGAAATTGTaGTTCCTTCATCCTTCAGGGCTGACAGCAAATAATTTTCTCCTA | + |
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Preference number: 5 (lower is better) Translates to: GGILKADYHDCTEKL*FLHPSGLTANNFLL Trigger: TAGGAGAAAATTATTTGCTGTCAGCCCTGAAGGATGAAGGAATCACAATTTCTCTGTACAATCATGGTAGTCAGCTTTCAAGATTCCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653603.1 ENST00000669640.1 |
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| CDS TCA 90 bp | CATATAATTGGTTGTCTTGAAGGGGTCCCAAATGACAATCTCTATTaGCCTGAAGTGAGTTTCCCTTTCTTCATCCTTAGAAGCTGGTTA | + |
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Preference number: 5 (lower is better) Translates to: HIIGCLEGVPNDNLY*PEVSFPFFILRSWL Trigger: TAACCAGCTTCTAAGGATGAAGAAAGGGAAACTCACTTCAGGTCAATAGAGATTGTCATTTGGGACCCCTTCAAGACAACCAATTATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669640.1 |
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| CDS TCA 90 bp | GATAAGCAGATTAAAGAACTACTCAGACTGTGGTATCTGGACTTCTaGAAGATACACGATGAATGTCTTATTACCAGTAGGACAAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: DKQIKELLRLWYLDF*KIHDECLITSRTKV Trigger: CACTTTTGTCCTACTGGTAATAAGACATTCATCGTGTATCTTTCAGAAGTCCAGATACCACAGTCTGAGTAGTTCTTTAATCTGCTTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000653603.1 ENST00000661042.1 ENST00000663433.1 ENST00000666427.1 ENST00000669640.1 |
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| CDS CCA 72 bp | TACTTTCCCTTCTCTCCACTTCATTCAGTCACAGGGTaGCTCATGGTCTTGTGGGCAGCCTGGGCTGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: YFPFSPLHSVTG*LMVLWAAWAGP Trigger: GGGGCCAGCCCAGGCTGCCCACAAGACCATGAGCCACCCTGTGACTGAATGAAGTGGAGAGAAGGGAAAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415469.5 |
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| CDS CCA 72 bp | GCAGCAAGCAGGGTGAAGGGGGAGACTGCCTTAGAATaGAGGGTGGCAGCTCCAAGGAATGGGAAAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: AASRVKGETALE*RVAAPRNGKAS Trigger: AGAAGCTTTCCCATTCCTTGGAGCTGCCACCCTCCATTCTAAGGCAGTCTCCCCCTTCACCCTGCTTGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000415469.5 ENST00000661758.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS GCA 72 bp | CTAACTCAGATGGAAATGCAGAAATCACCCGTCTTCTaGGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LTQMEMQKSPVF*VAHAGSCRPEL Trigger: CAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000415469.5 ENST00000437892.1 ENST00000653603.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS CCA 72 bp | GACAACAGGGCAGAGAAGGTGAGGCCTGAGGCTTGGTaGGTACCCCAAAAGAGGTTTGGCTTGGTACAGATC | + |
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Preference number: 6 (lower is better) Translates to: DNRAEKVRPEAW*VPQKRFGLVQI Trigger: GATCTGTACCAAGCCAAACCTCTTTTGGGGTACCCACCAAGCCTCAGGCCTCACCTTCTCTGCCCTGTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000415469.5 ENST00000661556.1 ENST00000661758.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS GCA 72 bp | TCTGAAGTACTGAAGTCAAAAACAGCACATGGGCCTTaGAGCATCTGGGGTGCAGCAAGCAGGGTGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SEVLKSKTAHGP*SIWGAASRVKG Trigger: CCCCTTCACCCTGCTTGCTGCACCCCAGATGCTGCAAGGCCCATGTGCTGTTTTTGACTTCAGTACTTCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000415469.5 ENST00000661758.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS GCA 72 bp | ATGCCTTGCAATTTGTCTCTTGTGGCCAAGCCTAACTaGGCCCACTGTCTGGCACTCCCTAGTGAGATGAAC | + |
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Preference number: 6 (lower is better) Translates to: MPCNLSLVAKPN*AHCLALPSEMN Trigger: GTTCATCTCACTAGGGAGTGCCAGACAGTGGGCGCAGTTAGGCTTGGCCACAAGAGACAAATTGCAAGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661042.1 |
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| CDS CAA 90 bp | GATATCCTCCTGTCTGGTAAGGAATGGTTCCAGACATGGCTGGAGTaGCTGCTTCTGAGGAGTGTCATGAAGACTGCAACAGGGAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: DILLSGKEWFQTWLE*LLLRSVMKTATGKA Trigger: AGCCTTCCCTGTTGCAGTCTTCATGACACTCCTCAGAAGCAGCAACTCCAGCCATGTCTGGAACCATTCCTTACCAGACAGGAGGATATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000415469.5 ENST00000661556.1 ENST00000661758.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS TCA 72 bp | ATAGCAGGCAAAATGCCAGCTGGGCCTCCAGTCACCTaGACAAAGTTGTGCCACTCACATGGTCGGCAAATT | + |
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Preference number: 6 (lower is better) Translates to: IAGKMPAGPPVT*TKLCHSHGRQI Trigger: AATTTGCCGACCATGTGAGTGGCACAACTTTGTTCAGGTGACTGGAGGCCCAGCTGGCATTTTGCCTGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653603.1 ENST00000669640.1 |
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| CDS CCA 72 bp | CAATGGGATCATTCAGCACTAGGACTAGGACAGCACTaGCTCTCTGGGTTTCCCTGTTCCAATTCTGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: QWDHSALGLGQH*LSGFPCSNSVA Trigger: TGCCACAGAATTGGAACAGGGAAACCCAGAGAGCCAGTGCTGTCCTAGTCCTAGTGCTGAATGATCCCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415469.5 |
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| CDS TCA 72 bp | GGGTACCCCAAAAGAGGTTTGGCTTGGTACAGATCATaGGTTGAGGCCATGATATCCTCCTGTCTGGTAAGG | + |
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Preference number: 6 (lower is better) Translates to: GYPKRGLAWYRS*VEAMISSCLVR Trigger: CCTTACCAGACAGGAGGATATCATGGCCTCAACTCATGATCTGTACCAAGCCAAACCTCTTTTGGGGTACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000415469.5 ENST00000661556.1 ENST00000661758.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS CCA 72 bp | GATATCCTCCTGTCTGGTAAGGAATGGTTCCAGACATaGCTGGAGTTGCTGCTTCTGAGGAGTGTCATGAAG | + |
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Preference number: 6 (lower is better) Translates to: DILLSGKEWFQT*LELLLLRSVMK Trigger: CTTCATGACACTCCTCAGAAGCAGCAACTCCAGCCATGTCTGGAACCATTCCTTACCAGACAGGAGGATATC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000415469.5 ENST00000661556.1 ENST00000661758.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS CAA 72 bp | TTCCCACTGCTGATTAGCTGGGTGGCCTTCAGGGAGTaGCTTAAATTCTCCATGCCTCAGGTTCTTTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: FPLLISWVAFRE*LKFSMPQVLCQ Trigger: CTGACAAAGAACCTGAGGCATGGAGAATTTAAGCAACTCCCTGAAGGCCACCCAGCTAATCAGCAGTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415469.5 |
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| CDS CAA 72 bp | CTGTCTGGTAAGGAATGGTTCCAGACATGGCTGGAGTaGCTGCTTCTGAGGAGTGTCATGAAGACTGCAACA | + |
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Preference number: 6 (lower is better) Translates to: LSGKEWFQTWLE*LLLRSVMKTAT Trigger: TGTTGCAGTCTTCATGACACTCCTCAGAAGCAGCAACTCCAGCCATGTCTGGAACCATTCCTTACCAGACAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000415469.5 ENST00000661556.1 ENST00000661758.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS CAA 72 bp | GTTAGAAAAATGTCTCCATGCCTTGCAATTTGTCTCTaGTGGCCAAGCCTAACTGCGCCCACTGTCTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: VRKMSPCLAICL*WPSLTAPTVWH Trigger: GTGCCAGACAGTGGGCGCAGTTAGGCTTGGCCACAAGAGACAAATTGCAAGGCATGGAGACATTTTTCTAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661042.1 |
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| CDS TCA 72 bp | CCCCAAAAGAGGTTTGGCTTGGTACAGATCATGAGTTaGGGCCATGATATCCTCCTGTCTGGTAAGGAATGG | + |
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Preference number: 6 (lower is better) Translates to: PQKRFGLVQIMS*GHDILLSGKEW Trigger: CCATTCCTTACCAGACAGGAGGATATCATGGCCTCAACTCATGATCTGTACCAAGCCAAACCTCTTTTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000415469.5 ENST00000661556.1 ENST00000661758.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS TCA 72 bp | AAGGGCACTGATCTCGTTCATGAGGGCTCTGGCCTATaGCATAATCATCCCTTAAAGTGCCCACCTCCTAAT | + |
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Preference number: 6 (lower is better) Translates to: KGTDLVHEGSGL*HNHPLKCPPPN Trigger: ATTAGGAGGTGGGCACTTTAAGGGATGATTATGTCATAGGCCAGAGCCCTCATGAACGAGATCAGTGCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415469.5 ENST00000661758.1 ENST00000666427.1 |
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| CDS GCA 72 bp | GCTGGGTGGCCTTCAGGGAGTTGCTTAAATTCTCCATaGCTCAGGTTCTTTGTCAGTAAGGAAAATGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: AGWPSGSCLNSP*LRFFVSKENAA Trigger: TGCAGCATTTTCCTTACTGACAAAGAACCTGAGGCATGGAGAATTTAAGCAACTCCCTGAAGGCCACCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415469.5 |
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| CDS CCA 72 bp | ACAGGGACCTCAGCAATGACACATTGTGGGATAGATTaGGAAGCCAGATTAGGTAATCACAGAGCTGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: TGTSAMTHCGID*EARLGNHRAGA Trigger: TGCTCCAGCTCTGTGATTACCTAATCTGGCTTCCCAATCTATCCCACAATGTGTCATTGCTGAGGTCCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000415469.5 ENST00000661556.1 ENST00000661758.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS CAA 90 bp | TTTTCAAGTGTTAGAAAAATGTCTCCATGCCTTGCAATTTGTCTCTaGTGGCCAAGCCTAACTGCGCCCACTGTCTGGCACTCCCTAGTG | + |
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Preference number: 6 (lower is better) Translates to: FSSVRKMSPCLAICL*WPSLTAPTVWHSLV Trigger: CACTAGGGAGTGCCAGACAGTGGGCGCAGTTAGGCTTGGCCACAAGAGACAAATTGCAAGGCATGGAGACATTTTTCTAACACTTGAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661042.1 |
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| CDS TCA 72 bp | CAGTGTCTGGTAAGGGCCAATTTTCTGGTTCGTGGATaGTGCTTCCTGGCTGTGTCCTCATATGATGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: QCLVRANFLVRG*CFLAVSSYDGK Trigger: TTTTCCATCATATGAGGACACAGCCAGGAAGCATCATCCACGAACCAGAAAATTGGCCCTTACCAGACACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000415469.5 ENST00000661758.1 ENST00000666427.1 |
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| CDS CCA 72 bp | CAGGAATTTGGAAGAGACTTAGTTGGCTCTGTTGGATaGTTCTGGCTTGGAGTCTCTTATGAAATAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: QEFGRDLVGSVG*FWLGVSYEIAG Trigger: GCCTGCTATTTCATAAGAGACTCCAAGCCAGAACCATCCAACAGAGCCAACTAAGTCTCTTCCAAATTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653603.1 ENST00000669640.1 |
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| CDS TCA 72 bp | GGTTGTCTTGAAGGGGTCCCAAATGACAATCTCTATTaGCCTGAAGTGAGTTTCCCTTTCTTCATCATAGGC | + |
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Preference number: 6 (lower is better) Translates to: GCLEGVPNDNLY*PEVSFPFFIIG Trigger: GCCTATGATGAAGAAAGGGAAACTCACTTCAGGTCAATAGAGATTGTCATTTGGGACCCCTTCAAGACAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000653603.1 ENST00000661042.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS TCA 72 bp | GGTTGTCTTGAAGGGGTCCCAAATGACAATCTCTATTaGCCTGAAGTGAGTTTCCCTTTCTTCATCCTAGAA | + |
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Preference number: 6 (lower is better) Translates to: GCLEGVPNDNLY*PEVSFPFFILE Trigger: TTCTAGGATGAAGAAAGGGAAACTCACTTCAGGTCAATAGAGATTGTCATTTGGGACCCCTTCAAGACAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437892.1 |
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| CDS TCA 72 bp | GCCCTATTCTGTGCAAGAGATAACTACACAAGGGCATaGATAGCAGGAGATGAGAATCATTGGAGGAATCTT | + |
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Preference number: 6 (lower is better) Translates to: ALFCARDNYTRA*IAGDENHWRNL Trigger: AAGATTCCTCCAATGATTCTCATCTCCTGCTATTCATGCCCTTGTGTAGTTATCTCTTGCACAGAATAGGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653603.1 ENST00000669640.1 |
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| CDS TCA 72 bp | GGTTGTCTTGAAGGGGTCCCAAATGACAATCTCTATTaGCCTGAAGTGAGTTTCCCTTTCTTCATCCTTAGA | + |
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Preference number: 6 (lower is better) Translates to: GCLEGVPNDNLY*PEVSFPFFILR Trigger: TCTAAGGATGAAGAAAGGGAAACTCACTTCAGGTCAATAGAGATTGTCATTTGGGACCCCTTCAAGACAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669640.1 |
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| CDS CCA 72 bp | TGTATTATCTCTCAGAGTTTCTTTGGGCCAGGAATTTaGAAGAGACTTAGTTGGCTCTGTTGGATGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: CIISQSFFGPGI*KRLSWLCWMVL Trigger: CAGAACCATCCAACAGAGCCAACTAAGTCTCTTCCAAATTCCTGGCCCAAAGAAACTCTGAGAGATAATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653603.1 ENST00000669640.1 |
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| CDS CAA 90 bp | TTTTCAAGTGTTAGAAAAATGTCTCCATGCCTTGCAATTTGTCTCTaGTGGCCAAGCCTAACTCAGATGGAAATGCAGAAATCACCCGTC | + |
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Preference number: 6 (lower is better) Translates to: FSSVRKMSPCLAICL*WPSLTQMEMQKSPV Trigger: GACGGGTGATTTCTGCATTTCCATCTGAGTTAGGCTTGGCCACAAGAGACAAATTGCAAGGCATGGAGACATTTTTCTAACACTTGAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000415469.5 ENST00000437892.1 ENST00000653603.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS TCA 72 bp | CAAGTCCCAATCACATGGACTTCACAGAGGGCCACTTaGATGTTTTCACAATGTGAAAAGATAAACAACAGC | + |
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Preference number: 6 (lower is better) Translates to: QVPITWTSQRAT*MFSQCEKINNS Trigger: GCTGTTGTTTATCTTTTCACATTGTGAAAACATTCAAGTGGCCCTCTGTGAAGTCCATGTGATTGGGACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653603.1 ENST00000669640.1 |
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| CDS CCA 72 bp | CCTGAAGTGAGTTTCCCTTTCTTCATCCTTAGAAGCTaGTTAAATAGTCTCTATAGGGCTGTCGTCTTCATA | + |
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Preference number: 6 (lower is better) Translates to: PEVSFPFFILRS*LNSLYRAVVFI Trigger: TATGAAGACGACAGCCCTATAGAGACTATTTAACCAGCTTCTAAGGATGAAGAAAGGGAAACTCACTTCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669640.1 |
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| CDS CAA 72 bp | GTTAGAAAAATGTCTCCATGCCTTGCAATTTGTCTCTaGTGGCCAAGCCTAACTCAGATGGAAATGCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: VRKMSPCLAICL*WPSLTQMEMQK Trigger: TTTCTGCATTTCCATCTGAGTTAGGCTTGGCCACAAGAGACAAATTGCAAGGCATGGAGACATTTTTCTAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000415469.5 ENST00000437892.1 ENST00000653603.1 ENST00000663433.1 ENST00000666427.1 |
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| CDS CAA 72 bp | CATCCCTTAAAGTGCCCACCTCCTAATTCCTTCATCTaGGAAGTGAAGTTTCAACTTATGAATTTGAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: HPLKCPPPNSFI*EVKFQLMNLRE Trigger: CTCCCTCAAATTCATAAGTTGAAACTTCACTTCCAAGATGAAGGAATTAGGAGGTGGGCACTTTAAGGGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000415469.5 ENST00000661758.1 ENST00000666427.1 |
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| CDS CAA 90 bp | TCCTTCAGAGGCCTGCATCACTGCTTCAAATACTCTTTAGACAGGTaGATAGTCCAAAGTGTTGTTGACATTTTGGAAATAGTAGCATCC | + |
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Preference number: 6 (lower is better) Translates to: SFRGLHHCFKYSLDR*IVQSVVDILEIVAS Trigger: GGATGCTACTATTTCCAAAATGTCAACAACACTTTGGACTATCAACCTGTCTAAAGAGTATTTGAAGCAGTGATGCAGGCCTCTGAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000415469.5 ENST00000661758.1 ENST00000666427.1 |
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| CDS CAA 90 bp | AAATACTCTTTAGACAGGTTGATAGTCCAAAGTGTTGTTGACATTTaGGAAATAGTAGCATCCAACGTGTGTAAGGAGCTGGGCTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: KYSLDRLIVQSVVDI*EIVASNVCKELGFR Trigger: TCTAAAGCCCAGCTCCTTACACACGTTGGATGCTACTATTTCCAAAATGTCAACAACACTTTGGACTATCAACCTGTCTAAAGAGTATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415469.5 |
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| CDS CAA 90 bp | AAATACTCTTTAGACAGGTTGATAGTCCAAAGTGTTGTTGACATTTaGGAAATAGTAGCATCCAACGTGTGTAAGGAGCTGGGCATACAA | + |
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Preference number: 6 (lower is better) Translates to: KYSLDRLIVQSVVDI*EIVASNVCKELGIQ Trigger: TTGTATGCCCAGCTCCTTACACACGTTGGATGCTACTATTTCCAAAATGTCAACAACACTTTGGACTATCAACCTGTCTAAAGAGTATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661758.1 ENST00000666427.1 |
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| CDS TCA 72 bp | AATGAAAGATCTAGAATTAAATTCTTTTCCCACTGCTaGTTAGCTGGGTGGCCTTCAGGGAGTTGCTTAAAT | + |
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Preference number: 6 (lower is better) Translates to: NERSRIKFFSHC*LAGWPSGSCLN Trigger: ATTTAAGCAACTCCCTGAAGGCCACCCAGCTAATCAGCAGTGGGAAAAGAATTTAATTCTAGATCTTTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415469.5 |
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| CDS TCA 72 bp | AAAGGCAGTTGTCTCTGGAAGTATCTGAACCATTTGTaGTGGAATCACCAGATAAGCAGATTAAAGAACTAC | + |
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Preference number: 6 (lower is better) Translates to: KGSCLWKYLNHL*WNHQISRLKNY Trigger: GTAGTTCTTTAATCTGCTTATCTGGTGATTCCATCACAAATGGTTCAGATACTTCCAGAGACAACTGCCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653603.1 ENST00000669640.1 |
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| CDS GCA 72 bp | TCCAGGGTGAATAATCTGAGAGAGCGAGGTAAAAGCTaGAACATCTTTTATGAACATCAAATTCTGCCATTT | + |
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Preference number: 6 (lower is better) Translates to: SRVNNLRERGKS*NIFYEHQILPF Trigger: AAATGGCAGAATTTGATGTTCATAAAAGATGTTGCAGCTTTTACCTCGCTCTCTCAGATTATTCACCCTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653603.1 ENST00000669640.1 |
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| CDS CAA 72 bp | GGCCTGCATCACTGCTTCAAATACTCTTTAGACAGGTaGATAGTCCAAAGTGTTGTTGACATTTTGGAAATA | + |
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Preference number: 6 (lower is better) Translates to: GLHHCFKYSLDR*IVQSVVDILEI Trigger: TATTTCCAAAATGTCAACAACACTTTGGACTATCAACCTGTCTAAAGAGTATTTGAAGCAGTGATGCAGGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000415469.5 ENST00000661758.1 ENST00000666427.1 |
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| CDS TCA 72 bp | ATTAAAGAACTACTCAGACTGTGGTATCTGGACTTCTaGAAGATACACGATGAATGTCTTATTACCAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: IKELLRLWYLDF*KIHDECLITSR Trigger: CCTACTGGTAATAAGACATTCATCGTGTATCTTTCAGAAGTCCAGATACCACAGTCTGAGTAGTTCTTTAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000653603.1 ENST00000661042.1 ENST00000663433.1 ENST00000666427.1 ENST00000669640.1 |
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| CDS CAA 72 bp | GTTAGAAAAATGTCTCCATGCCTTGCAATTTGTCTCTaGTGGCCAAGCCTAAAGTTAGGCTCAATAAATATT | + |
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Preference number: 6 (lower is better) Translates to: VRKMSPCLAICL*WPSLKLGSINI Trigger: AATATTTATTGAGCCTAACTTTAGGCTTGGCCACAAGAGACAAATTGCAAGGCATGGAGACATTTTTCTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661556.1 |
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| CDS CAA 90 bp | AGCAGACACTACGAACTCTCATCCTTATTCCTTCTAACCTCCAAATaGAATGTGCATAAATCCAAGGGTTCTCAAATAGAAAACATATGT | + |
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Preference number: 6 (lower is better) Translates to: SRHYELSSLFLLTSK*NVHKSKGSQIENIC Trigger: ACATATGTTTTCTATTTGAGAACCCTTGGATTTATGCACATTCAATTTGGAGGTTAGAAGGAATAAGGATGAGAGTTCGTAGTGTCTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661042.1 |
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| CDS GCA 72 bp | GTAAAAGCTGCAACATCTTTTATGAACATCAAATTCTaGCATTTCCATAATATCCTACTGGTCACACATCAG | + |
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Preference number: 6 (lower is better) Translates to: VKAATSFMNIKF*HFHNILLVTHQ Trigger: CTGATGTGTGACCAGTAGGATATTATGGAAATGGCAGAATTTGATGTTCATAAAAGATGTTGCAGCTTTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653603.1 ENST00000669640.1 |
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| CDS CAA 72 bp | TACGAACTCTCATCCTTATTCCTTCTAACCTCCAAATaGAATGTGCATAAATCCAAGGGTTCTCAAATAGAA | + |
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Preference number: 6 (lower is better) Translates to: YELSSLFLLTSK*NVHKSKGSQIE Trigger: TTCTATTTGAGAACCCTTGGATTTATGCACATTCAATTTGGAGGTTAGAAGGAATAAGGATGAGAGTTCGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661042.1 |
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| CDS CCA 72 bp | ATAAGCAGATTAAAGAACTACTCAGACTGTGGTATCTaGACTTCTGAAAGATACACGATGAATGTCTTATTA | + |
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Preference number: 6 (lower is better) Translates to: ISRLKNYSDCGI*TSERYTMNVLL Trigger: TAATAAGACATTCATCGTGTATCTTTCAGAAGTCCAGATACCACAGTCTGAGTAGTTCTTTAATCTGCTTAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000653603.1 ENST00000661042.1 ENST00000663433.1 ENST00000666427.1 ENST00000669640.1 |
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