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Pregenerated sensors for LINC00853 (Homo sapiens)

Ensembl gene IDs: ENSG00000224805

Ensembl transcript IDs: ENST00000429328.2

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CTTGCTCTGGGACCAGGGTGGAGGCACCTGCCTCCCATCCAGACCTaGCTGGAGGGTCTTGACTCCCTAGCTTGGCTCTCCTCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: LALGPGWRHLPPIQT*LEGLDSLAWLSSQG
Trigger: ACCCTGGGAGGAGAGCCAAGCTAGGGAGTCAAGACCCTCCAGCCAGGTCTGGATGGGAGGCAGGTGCCTCCACCCTGGTCCCAGAGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429328.2
CDS GCA 90 bp TACCCACCTTCACAGGGAAGTCAGGTGGCTGAAGCCAGCAGAACTTaGTCTGGGACCAGGGTGGAGGCACCTGCCTCCCATCCAGACCTG +
Preference number: 5 (lower is better)
Translates to: YPPSQGSQVAEASRT*SGTRVEAPASHPDL
Trigger: CAGGTCTGGATGGGAGGCAGGTGCCTCCACCCTGGTCCCAGAGCAAGTTCTGCTGGCTTCAGCCACCTGACTTCCCTGTGAAGGTGGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429328.2
CDS CCA 90 bp TCTTTCTGGTTGAAGGTCCTGGGAGCCCTCCGGAACTCTGCTGCCTaGCAGTCCTTCAGTTTCGGGAGCTTTTCTGTCTGCCCGTGGCCT +
Preference number: 5 (lower is better)
Translates to: SFWLKVLGALRNSAA*QSFSFGSFSVCPWP
Trigger: AGGCCACGGGCAGACAGAAAAGCTCCCGAAACTGAAGGACTGCCAGGCAGCAGAGTTCCGGAGGGCTCCCAGGACCTTCAACCAGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429328.2
CDS GCA 90 bp TGTCTCTTTCTGGTTGAAGGTCCTGGGAGCCCTCCGGAACTCTGCTaGCTGGCAGTCCTTCAGTTTCGGGAGCTTTTCTGTCTGCCCGTG +
Preference number: 5 (lower is better)
Translates to: CLFLVEGPGSPPELC*LAVLQFRELFCLPV
Trigger: CACGGGCAGACAGAAAAGCTCCCGAAACTGAAGGACTGCCAGGCAGCAGAGTTCCGGAGGGCTCCCAGGACCTTCAACCAGAAAGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429328.2
CDS GCA 90 bp CTCTGTCTCTTTCTGGTTGAAGGTCCTGGGAGCCCTCCGGAACTCTaGTGCCTGGCAGTCCTTCAGTTTCGGGAGCTTTTCTGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: LCLFLVEGPGSPPEL*CLAVLQFRELFCLP
Trigger: GGGCAGACAGAAAAGCTCCCGAAACTGAAGGACTGCCAGGCAGCAGAGTTCCGGAGGGCTCCCAGGACCTTCAACCAGAAAGAGACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429328.2
CDS TCA 90 bp ACATTCCTTGCAGGGATATGCGCATATGCTCTGTCTCTTTCTGGTTaGAGGTCCTGGGAGCCCTCCGGAACTCTGCTGCCTGGCAGTCCT +
Preference number: 5 (lower is better)
Translates to: TFLAGICAYALSLSG*RSWEPSGTLLPGSP
Trigger: AGGACTGCCAGGCAGCAGAGTTCCGGAGGGCTCCCAGGACCTTCAACCAGAAAGAGACAGAGCATATGCGCATATCCCTGCAAGGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429328.2
CDS GCA 72 bp CAGCAGAACTTGCTCTGGGACCAGGGTGGAGGCACCTaGCTCCCATCCAGACCTGGCTGGAGGGTCTTGACT +
Preference number: 6 (lower is better)
Translates to: QQNLLWDQGGGT*LPSRPGWRVLT
Trigger: AGTCAAGACCCTCCAGCCAGGTCTGGATGGGAGGCAGGTGCCTCCACCCTGGTCCCAGAGCAAGTTCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429328.2
CDS CCA 72 bp GCTCTGGCCTCTACCCACCTTCACAGGGAAGTCAGGTaGCTGAAGCCAGCAGAACTTGCTCTGGGACCAGGG +
Preference number: 6 (lower is better)
Translates to: ALASTHLHREVR*LKPAELALGPG
Trigger: CCCTGGTCCCAGAGCAAGTTCTGCTGGCTTCAGCCACCTGACTTCCCTGTGAAGGTGGGTAGAGGCCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429328.2
CDS TCA 72 bp TGGCCTCTACCCACCTTCACAGGGAAGTCAGGTGGCTaGAGCCAGCAGAACTTGCTCTGGGACCAGGGTGGA +
Preference number: 6 (lower is better)
Translates to: WPLPTFTGKSGG*SQQNLLWDQGG
Trigger: TCCACCCTGGTCCCAGAGCAAGTTCTGCTGGCTTCAGCCACCTGACTTCCCTGTGAAGGTGGGTAGAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429328.2
CDS CAA 72 bp CCACCTGGTGGCTGCACGCTCCAAAGGAAGCGTAGATaGATGAGAGCCTCGGAAGTTGAGCTTCAGGCGCGG +
Preference number: 6 (lower is better)
Translates to: PPGGCTLQRKRR*MRASEVELQAR
Trigger: CCGCGCCTGAAGCTCAACTTCCGAGGCTCTCATCAATCTACGCTTCCTTTGGAGCGTGCAGCCACCAGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429328.2
CDS GCA 72 bp CTGGTTGAAGGTCCTGGGAGCCCTCCGGAACTCTGCTaGCTGGCAGTCCTTCAGTTTCGGGAGCTTTTCTGT +
Preference number: 6 (lower is better)
Translates to: LVEGPGSPPELC*LAVLQFRELFC
Trigger: ACAGAAAAGCTCCCGAAACTGAAGGACTGCCAGGCAGCAGAGTTCCGGAGGGCTCCCAGGACCTTCAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429328.2
CDS CCA 72 bp TTGAAGGTCCTGGGAGCCCTCCGGAACTCTGCTGCCTaGCAGTCCTTCAGTTTCGGGAGCTTTTCTGTCTGC +
Preference number: 6 (lower is better)
Translates to: LKVLGALRNSAA*QSFSFGSFSVC
Trigger: GCAGACAGAAAAGCTCCCGAAACTGAAGGACTGCCAGGCAGCAGAGTTCCGGAGGGCTCCCAGGACCTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429328.2
CDS TCA 72 bp GCAGGGATATGCGCATATGCTCTGTCTCTTTCTGGTTaGAGGTCCTGGGAGCCCTCCGGAACTCTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: AGICAYALSLSG*RSWEPSGTLLP
Trigger: AGGCAGCAGAGTTCCGGAGGGCTCCCAGGACCTTCAACCAGAAAGAGACAGAGCATATGCGCATATCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429328.2
CDS CAA 72 bp TGCAGGGATATGCGCATATGCTCTGTCTCTTTCTGGTaGAAGGTCCTGGGAGCCCTCCGGAACTCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: CRDMRICSVSFW*KVLGALRNSAA
Trigger: GGCAGCAGAGTTCCGGAGGGCTCCCAGGACCTTCAACCAGAAAGAGACAGAGCATATGCGCATATCCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429328.2
CDS CAA 90 bp TACATTCCTTGCAGGGATATGCGCATATGCTCTGTCTCTTTCTGGTaGAAGGTCCTGGGAGCCCTCCGGAACTCTGCTGCCTGGCAGTCC +
Preference number: 6 (lower is better)
Translates to: YIPCRDMRICSVSFW*KVLGALRNSAAWQS
Trigger: GGACTGCCAGGCAGCAGAGTTCCGGAGGGCTCCCAGGACCTTCAACCAGAAAGAGACAGAGCATATGCGCATATCCCTGCAAGGAATGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429328.2
CDS CAA 90 bp TACTATCTGTTTATTGTGCTTCAAGGATCCATTAGATCAGGACTATaGCTGGGCAAAGCCTCTTCCCGCAGCCTAGGGGTAGTAAAGGTG +
Preference number: 6 (lower is better)
Translates to: YYLFIVLQGSIRSGL*LGKASSRSLGVVKV
Trigger: CACCTTTACTACCCCTAGGCTGCGGGAAGAGGCTTTGCCCAGCAATAGTCCTGATCTAATGGATCCTTGAAGCACAATAAACAGATAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429328.2
CDS CAA 72 bp TCCTTTGCCGGTAAAATTGGCTCTATAGTACATTCCTaGCAGGGATATGCGCATATGCTCTGTCTCTTTCTG +
Preference number: 6 (lower is better)
Translates to: SFAGKIGSIVHS*QGYAHMLCLFL
Trigger: CAGAAAGAGACAGAGCATATGCGCATATCCCTGCAAGGAATGTACTATAGAGCCAATTTTACCGGCAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429328.2
CDS CAA 90 bp ATCTTCCATTCCTTTGCCGGTAAAATTGGCTCTATAGTACATTCCTaGCAGGGATATGCGCATATGCTCTGTCTCTTTCTGGTTGAAGGT +
Preference number: 6 (lower is better)
Translates to: IFHSFAGKIGSIVHS*QGYAHMLCLFLVEG
Trigger: ACCTTCAACCAGAAAGAGACAGAGCATATGCGCATATCCCTGCAAGGAATGTACTATAGAGCCAATTTTACCGGCAAAGGAATGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429328.2