Pregenerated sensors for LINC00851 (Homo sapiens)
Ensembl gene IDs: ENSG00000237282Ensembl transcript IDs: ENST00000423033.1, ENST00000594642.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGACGGGACCTCAGGCAAGGCAGCTCTCTGAAGTTGCTGATAGCTaGAGGCCACCTGCTGCCGCACTCGCTACAGCCAGGGCAGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GTGPQARQLSEVADS*RPPAAALATARAAS Trigger: GCTTGCTGCCCTGGCTGTAGCGAGTGCGGCAGCAGGTGGCCTCCAGCTATCAGCAACTTCAGAGAGCTGCCTTGCCTGAGGTCCCGTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||
| CDS CCA 90 bp | CTGGAGGGGCTGTCTCTGCTTTGCAGACTTGTCCTATGTCCCCAGTaGGCTTCAGTGGGCTGGCTTGCCATTCCCTCCTTTCCACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LEGLSLLCRLVLCPQ*ASVGWLAIPSFPLR Trigger: CCTCAGTGGAAAGGAGGGAATGGCAAGCCAGCCCACTGAAGCCCACTGGGGACATAGGACAAGTCTGCAAAGCAGAGACAGCCCCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||
| CDS GCA 90 bp | CAGTCAACTGCTATGTGGCCCAAGAATGCCTCAGCCACCAGGTGGTaGTCCCATCAGCCAGAATTGCCCATCATGGTGTCCACTGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QSTAMWPKNASATRW*SHQPELPIMVSTVL Trigger: AAGCACAGTGGACACCATGATGGGCAATTCTGGCTGATGGGAGCACCACCTGGTGGCTGAGGCATTCTTGGGCCACATAGCAGTTGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||
| CDS CCA 90 bp | TTAACACTTGTGAAAAGATGGTGGAGAGGGCAGTCAACTGCTATGTaGCCCAAGAATGCCTCAGCCACCAGGTGGTGCTCCCATCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LTLVKRWWRGQSTAM*PKNASATRWCSHQP Trigger: TGGCTGATGGGAGCACCACCTGGTGGCTGAGGCATTCTTGGGCCACATAGCAGTTGACTGCCCTCTCCACCATCTTTTCACAAGTGTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||
| CDS TCA 90 bp | TGGGCTTCAGTGGGCTGGCTTGCCATTCCCTCCTTTCCACTGAGGTaGGTGAGTTCCCATGCACTCATTGCCCATTTGGGTTTCTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: WASVGWLAIPSFPLR*VSSHALIAHLGFFY Trigger: ATAGAAGAAACCCAAATGGGCAATGAGTGCATGGGAACTCACTCACCTCAGTGGAAAGGAGGGAATGGCAAGCCAGCCCACTGAAGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||
| CDS GCA 90 bp | ATTGGGATTAACACTTGTGAAAAGATGGTGGAGAGGGCAGTCAACTaGTATGTGGCCCAAGAATGCCTCAGCCACCAGGTGGTGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: IGINTCEKMVERAVN*YVAQECLSHQVVLP Trigger: TGGGAGCACCACCTGGTGGCTGAGGCATTCTTGGGCCACATAGCAGTTGACTGCCCTCTCCACCATCTTTTCACAAGTGTTAATCCCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||
| CDS CCA 90 bp | GAAGAGGATGGGTGTTTATTGGGATTAACACTTGTGAAAAGATGGTaGAGAGGGCAGTCAACTGCTATGTGGCCCAAGAATGCCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EEDGCLLGLTLVKRW*RGQSTAMWPKNASA Trigger: GGCTGAGGCATTCTTGGGCCACATAGCAGTTGACTGCCCTCTCCACCATCTTTTCACAAGTGTTAATCCCAATAAACACCCATCCTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||
| CDS CCA 90 bp | ATGGAAGAGGATGGGTGTTTATTGGGATTAACACTTGTGAAAAGATaGTGGAGAGGGCAGTCAACTGCTATGTGGCCCAAGAATGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: MEEDGCLLGLTLVKR*WRGQSTAMWPKNAS Trigger: TGAGGCATTCTTGGGCCACATAGCAGTTGACTGCCCTCTCCACCATCTTTTCACAAGTGTTAATCCCAATAAACACCCATCCTCTTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||
| CDS TCA 90 bp | TCTTCTATTTTTCTTATCGGCTTAGAGAATTTCTTTACATCCTCTTaGATCAGAGCATCTTCTAGAGTCCAGACAGTGCTGCACATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSIFLIGLENFFTSS*IRASSRVQTVLHMG Trigger: CCCCATGTGCAGCACTGTCTGGACTCTAGAAGATGCTCTGATTCAAGAGGATGTAAAGAAATTCTCTAAGCCGATAAGAAAAATAGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423033.1 |
||
| CDS CCA 72 bp | GCCGCACTCGCTACAGCCAGGGCAGCAAGCCCTGCCTaGAAAGAGGATGTGGGTGGTGCATCTCCGCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: AALATARAASPA*KEDVGGASPPA Trigger: GGCAGGCGGAGATGCACCACCCACATCCTCTTTCCAGGCAGGGCTTGCTGCCCTGGCTGTAGCGAGTGCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||
| CDS GCA 72 bp | GCTGGTGAAGCCACGGGCCTGGCTGCTTCCCACACCTaGCAGATGAGCCAGGGGTTAGTGACTGTGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGEATGLAASHT*QMSQGLVTVSS Trigger: GGAAGACACAGTCACTAACCCCTGGCTCATCTGGCAGGTGTGGGAAGCAGCCAGGCCCGTGGCTTCACCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||
| CDS CCA 72 bp | CCTCAGGCAAGGCAGCTCTCTGAAGTTGCTGATAGCTaGAGGCCACCTGCTGCCGCACTCGCTACAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PQARQLSEVADS*RPPAAALATAR Trigger: CCTGGCTGTAGCGAGTGCGGCAGCAGGTGGCCTCCAGCTATCAGCAACTTCAGAGAGCTGCCTTGCCTGAGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||
| CDS GCA 72 bp | GCTATGTGGCCCAAGAATGCCTCAGCCACCAGGTGGTaGTCCCATCAGCCAGAATTGCCCATCATGGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AMWPKNASATRW*SHQPELPIMVS Trigger: GGACACCATGATGGGCAATTCTGGCTGATGGGAGCACCACCTGGTGGCTGAGGCATTCTTGGGCCACATAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||
| CDS CCA 72 bp | GTGAAAAGATGGTGGAGAGGGCAGTCAACTGCTATGTaGCCCAAGAATGCCTCAGCCACCAGGTGGTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VKRWWRGQSTAM*PKNASATRWCS Trigger: GGAGCACCACCTGGTGGCTGAGGCATTCTTGGGCCACATAGCAGTTGACTGCCCTCTCCACCATCTTTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||
| CDS CCA 72 bp | CTGTCTCTGCTTTGCAGACTTGTCCTATGTCCCCAGTaGGCTTCAGTGGGCTGGCTTGCCATTCCCTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSLLCRLVLCPQ*ASVGWLAIPSF Trigger: AAAGGAGGGAATGGCAAGCCAGCCCACTGAAGCCCACTGGGGACATAGGACAAGTCTGCAAAGCAGAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||
| CDS GCA 72 bp | AACACTTGTGAAAAGATGGTGGAGAGGGCAGTCAACTaGTATGTGGCCCAAGAATGCCTCAGCCACCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: NTCEKMVERAVN*YVAQECLSHQV Trigger: CACCTGGTGGCTGAGGCATTCTTGGGCCACATAGCAGTTGACTGCCCTCTCCACCATCTTTTCACAAGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||
| CDS CCA 72 bp | GATGGGTGTTTATTGGGATTAACACTTGTGAAAAGATaGTGGAGAGGGCAGTCAACTGCTATGTGGCCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: DGCLLGLTLVKR*WRGQSTAMWPK Trigger: CTTGGGCCACATAGCAGTTGACTGCCCTCTCCACCATCTTTTCACAAGTGTTAATCCCAATAAACACCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||
| CDS CCA 72 bp | GGGTGTTTATTGGGATTAACACTTGTGAAAAGATGGTaGAGAGGGCAGTCAACTGCTATGTGGCCCAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: GCLLGLTLVKRW*RGQSTAMWPKN Trigger: ATTCTTGGGCCACATAGCAGTTGACTGCCCTCTCCACCATCTTTTCACAAGTGTTAATCCCAATAAACACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||
| CDS TCA 72 bp | TTTCTTATCGGCTTAGAGAATTTCTTTACATCCTCTTaGATCAGAGCATCTTCTAGAGTCCAGACAGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FLIGLENFFTSS*IRASSRVQTVL Trigger: CAGCACTGTCTGGACTCTAGAAGATGCTCTGATTCAAGAGGATGTAAAGAAATTCTCTAAGCCGATAAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000423033.1 ENST00000594642.1 |
||