Pregenerated sensors for LINC00847 (Homo sapiens)
Ensembl gene IDs: ENSG00000245060Ensembl transcript IDs: ENST00000501855.6, ENST00000501937.2, ENST00000502162.2, ENST00000508309.2, ENST00000509921.2, ENST00000651233.1, ENST00000652659.1, ENST00000653411.1, ENST00000653584.1, ENST00000654313.1, ENST00000657229.1, ENST00000658025.1, ENST00000658585.1, ENST00000659497.1, ENST00000659553.1, ENST00000660674.1, ENST00000661298.1, ENST00000661444.1, ENST00000661810.1, ENST00000662722.1, ENST00000665473.1, ENST00000667360.1
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGGCCTCCCCGCAAAGGTCCCCGAGGCGGCGGCGGCGGCGGGCTGTaGGAACCGCAGAAGAACGCTGGGCGCGCAGCGACCCGTCCACCC | + |
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Preference number: 5 (lower is better) Translates to: RPPRKGPRGGGGGGL*EPQKNAGRAATRPP Trigger: GGGTGGACGGGTCGCTGCGCGCCCAGCGTTCTTCTGCGGTTCTCACAGCCCGCCGCCGCCGCCGCCTCGGGGACCTTTGCGGGGAGGCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000501855.6 ENST00000502162.2 ENST00000508309.2 ENST00000509921.2 ENST00000651233.1 ENST00000653411.1 |
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| CDS GCA 90 bp | CGCGGCCTGAGGCCGGAGAGTCCCTTCAACCCGGGAGGCGGCGGCTaGAGGGAGCCGAGACGGCGCCATTGCCCTCCAGCCTGGGCAAAA | + |
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Preference number: 5 (lower is better) Translates to: RGLRPESPFNPGGGG*REPRRRHCPPAWAK Trigger: TTTTGCCCAGGCTGGAGGGCAATGGCGCCGTCTCGGCTCCCTGCAGCCGCCGCCTCCCGGGTTGAAGGGACTCTCCGGCCTCAGGCCGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501937.2 ENST00000651233.1 ENST00000659553.1 |
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| CDS GCA 90 bp | GGTGGAGTCTGGTGGAGAAAGACCGACCTGGAAGGCACCAGCATGTaGACGTGGCAACTGAGGTCGAGGACGTGCCTGAGGCCTCCCCGC | + |
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Preference number: 5 (lower is better) Translates to: GGVWWRKTDLEGTSM*TWQLRSRTCLRPPR Trigger: GCGGGGAGGCCTCAGGCACGTCCTCGACCTCAGTTGCCACGTGCACATGCTGGTGCCTTCCAGGTCGGTCTTTCTCCACCAGACTCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000501855.6 |
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| CDS GCA 90 bp | GGTGGAGTCTGGTGGAGAAAGACCGACCTGGAAGGCACCAGCATGTaGACGTGGCAACTGAGGTCGAGGACGTGCCTGAGAGAGAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: GGVWWRKTDLEGTSM*TWQLRSRTCLRERR Trigger: CCTCCTCTCTCTCAGGCACGTCCTCGACCTCAGTTGCCACGTGCACATGCTGGTGCCTTCCAGGTCGGTCTTTCTCCACCAGACTCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000651233.1 ENST00000657229.1 ENST00000659497.1 ENST00000661298.1 ENST00000661444.1 |
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| CDS GCA 90 bp | TTGGGCAGTGACACCCTCACTCCCTGCATGGTCCCCTCTTCACCTTaGTTGGGCACTGAGACCCATGCCAGGCCATGCTCCACCACCACA | + |
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Preference number: 5 (lower is better) Translates to: LGSDTLTPCMVPSSP*LGTETHARPCSTTT Trigger: TGTGGTGGTGGAGCATGGCCTGGCATGGGTCTCAGTGCCCAAGCAAGGTGAAGAGGGGACCATGCAGGGAGTGAGGGTGTCACTGCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651233.1 |
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| CDS TCA 90 bp | AGCTACCTCTACGCAAATGGTAGCTACCTCTGCGCAGGTGGAAGTTaGGTTCGGTTCACGCGGGACCCTCTTCCCTGTGGCAAGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: SYLYANGSYLCAGGS*VRFTRDPLPCGKLL Trigger: CAGCAGCTTGCCACAGGGAAGAGGGTCCCGCGTGAACCGAACTCAACTTCCACCTGCGCAGAGGTAGCTACCATTTGCGTAGAGGTAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658025.1 |
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| CDS GCA 90 bp | TTCCTGGGTGATGCAGATTCTGTGTGTCTGGAAGGCACCAGCATGTaGACGTGGCAACTGAGGTCGAGGACGTGCCTGAGAGAGAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: FLGDADSVCLEGTSM*TWQLRSRTCLRERR Trigger: CCTCCTCTCTCTCAGGCACGTCCTCGACCTCAGTTGCCACGTGCACATGCTGGTGCCTTCCAGACACACAGAATCTGCATCACCCAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658585.1 |
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| CDS TCA 90 bp | GAAGGCTGGCAAGTCCAAGATCAAGGTGCAGGCAGATCTGGTGTCTaGGGAAAGCCCACCTGCTTCTGGTTTGCAGATGGCAGTCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: EGWQVQDQGAGRSGV*GKPTCFWFADGSLC Trigger: ACAAAGACTGCCATCTGCAAACCAGAAGCAGGTGGGCTTTCCTCAGACACCAGATCTGCCTGCACCTTGATCTTGGACTTGCCAGCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000509921.2 ENST00000653411.1 ENST00000653584.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661444.1 ENST00000661810.1 ENST00000665473.1 |
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| CDS TCA 90 bp | GTTGAGTTCGGTTCACGCGGGACCCTCTTCCCTGTGGCAAGCTGCTaGAGGAGACCTGCTGTTACTGCTTTAGCTGCTGTTCTGCTTAAT | + |
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Preference number: 5 (lower is better) Translates to: VEFGSRGTLFPVASC*RRPAVTALAAVLLN Trigger: ATTAAGCAGAACAGCAGCTAAAGCAGTAACAGCAGGTCTCCTTCAGCAGCTTGCCACAGGGAAGAGGGTCCCGCGTGAACCGAACTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000652659.1 ENST00000654313.1 ENST00000658025.1 ENST00000660674.1 |
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| CDS GCA 90 bp | GTGGCATGGCCTGATCCAAGTTGGAAGGCCCACCTGCTTCTGGTTTaGAGATGGCAGTCTTTGTGTGGTAGTCTTACATGGCAGAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: VAWPDPSWKAHLLLV*RWQSLCGSLTWQRE Trigger: CTCTCTCTGCCATGTAAGACTACCACACAAAGACTGCCATCTGCAAACCAGAAGCAGGTGGGCCTTCCAACTTGGATCAGGCCATGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000508309.2 ENST00000652659.1 ENST00000661298.1 ENST00000662722.1 ENST00000667360.1 |
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| CDS TCA 90 bp | ACCCTCACTGCCGACATCTGTCATTCAGCTTCTTCCTACCGAGTGTaGGGTGCCACACTCTTCAGTTGCTGCTCACAGTCAAGCCTTACA | + |
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Preference number: 5 (lower is better) Translates to: TLTADICHSASSYRV*GATLFSCCSQSSLT Trigger: TGTAAGGCTTGACTGTGAGCAGCAACTGAAGAGTGTGGCACCTCACACTCGGTAGGAAGAAGCTGAATGACAGATGTCGGCAGTGAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651233.1 ENST00000660674.1 |
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| CDS GCA 90 bp | CACTGCCGACATCTGTCATTCAGCTTCTTCCTACCGAGTGTGAGGTaGCACACTCTTCAGTTGCTGCTCACAGTCAAGCCTTACAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: HCRHLSFSFFLPSVR*HTLQLLLTVKPYSS Trigger: TGAGCTGTAAGGCTTGACTGTGAGCAGCAACTGAAGAGTGTGGCACCTCACACTCGGTAGGAAGAAGCTGAATGACAGATGTCGGCAGTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651233.1 ENST00000660674.1 |
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| CDS TCA 90 bp | CCTGAACCAGCCTCAGTATCACCAGGGCAGCATGTGAGAGGAAGTTaGGGCAGTATCTTGGCACTGTTTTTAGCCACTGCTCTATACCAG | + |
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Preference number: 5 (lower is better) Translates to: PEPASVSPGQHVRGS*GSILALFLATALYQ Trigger: CTGGTATAGAGCAGTGGCTAAAAACAGTGCCAAGATACTGCCTCAACTTCCTCTCACATGCTGCCCTGGTGATACTGAGGCTGGTTCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000651233.1 |
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| CDS TCA 90 bp | TCTGGGCCCTCAGGTGATTGGATAGTGCCTGCCTACATTGAGGGTTaGTCTTCCCTACTCAGTCCACTGAGCAGGTATTCTCAAGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: SGPSGDWIVPAYIEG*SSLLSPLSRYSQVF Trigger: AAAGACTTGAGAATACCTGCTCAGTGGACTGAGTAGGGAAGATCAACCCTCAATGTAGGCAGGCACTATCCAATCACCTGAGGGCCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000509921.2 ENST00000653411.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661444.1 ENST00000661810.1 ENST00000665473.1 |
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| CDS TCA 90 bp | CTGAAGGGCTTTGTTAAAACACAGGCTGCTGGGCCCCAGAGTTTCTaGTGCAGGAAGTCTGGGTGGCTGAGAATTTGCATGGTTACAAGT | + |
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Preference number: 5 (lower is better) Translates to: LKGFVKTQAAGPQSF*CRKSGWLRICMVTS Trigger: ACTTGTAACCATGCAAATTCTCAGCCACCCAGACTTCCTGCATCAGAAACTCTGGGGCCCAGCAGCCTGTGTTTTAACAAAGCCCTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000502162.2 ENST00000658585.1 ENST00000661810.1 ENST00000667360.1 |
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| CDS TCA 90 bp | CAAGTTGGAAGGCCAAGCCATGCTACCATTTCTTTCTTAGAGTTCTaGAGGCTGGCAAGTCCAAGATCAAGGTGCAGGCAGATCTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: QVGRPSHATISFLEF*RLASPRSRCRQIWC Trigger: ACACCAGATCTGCCTGCACCTTGATCTTGGACTTGCCAGCCTTCAGAACTCTAAGAAAGAAATGGTAGCATGGCTTGGCCTTCCAACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653584.1 |
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| CDS TCA 90 bp | TTCCAACTTAGACCAAGCCATGCTACCATTTCTTTCTTAGAGTTCTaGAGGCTGGCAAGTCCAAGATCAAGGTGCAGGCAGATCTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: FQLRPSHATISFLEF*RLASPRSRCRQIWC Trigger: ACACCAGATCTGCCTGCACCTTGATCTTGGACTTGCCAGCCTTCAGAACTCTAAGAAAGAAATGGTAGCATGGCTTGGTCTAAGTTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000509921.2 ENST00000653411.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661444.1 ENST00000661810.1 ENST00000665473.1 |
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| CDS TCA 90 bp | TTCCCTACTCAGTCCACTGAGCAGGTATTCTCAAGTCTTTATCCTTaGACTCAGTTCCACCATGTGCTTGTTTCTCAGGCCTTCCAACTT | + |
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Preference number: 5 (lower is better) Translates to: FPTQSTEQVFSSLYP*TQFHHVLVSQAFQL Trigger: AAGTTGGAAGGCCTGAGAAACAAGCACATGGTGGAACTGAGTTCAAGGATAAAGACTTGAGAATACCTGCTCAGTGGACTGAGTAGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000509921.2 ENST00000653411.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661444.1 ENST00000661810.1 ENST00000665473.1 |
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| CDS GCA 90 bp | AGCAGGTATTCTCAAGTCTTTATCCTTGAACTCAGTTCCACCATGTaGTTGTTTCTCAGGCCTTCCAACTTAGACCAAGCCATGCTACCA | + |
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Preference number: 5 (lower is better) Translates to: SRYSQVFILELSSTM*LFLRPSNLDQAMLP Trigger: TGGTAGCATGGCTTGGTCTAAGTTGGAAGGCCTGAGAAACAAGCACATGGTGGAACTGAGTTCAAGGATAAAGACTTGAGAATACCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000509921.2 ENST00000653411.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661444.1 ENST00000661810.1 ENST00000665473.1 |
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| CDS TCA 90 bp | AAGTTCCTGGGTGATGCAGATTCTGTGTGTCTGGAGGTAACATTTTaGGAACTGCTGTTTCAGAAGTTCTCCACATTAAAGTCTACCAGT | + |
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Preference number: 5 (lower is better) Translates to: KFLGDADSVCLEVTF*ELLFQKFSTLKSTS Trigger: ACTGGTAGACTTTAATGTGGAGAACTTCTGAAACAGCAGTTCTCAAAATGTTACCTCCAGACACACAGAATCTGCATCACCCAGGAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000502162.2 ENST00000661810.1 ENST00000667360.1 |
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| CDS TCA 90 bp | TCTCGTGAACATCCCTTCAAGAGAAGCCAGACATTTGACAGAAATTaGAAAGGAGACTGTTGGAGATTATATTTCTTCTTGAGGGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SREHPFKRSQTFDRN*KGDCWRLYFFLRAW Trigger: CCAGGCCCTCAAGAAGAAATATAATCTCCAACAGTCTCCTTTTCAATTTCTGTCAAATGTCTGGCTTCTCTTGAAGGGATGTTCACGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651233.1 ENST00000660674.1 |
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| CDS GCA 90 bp | CCTTTAGAGCAAAGATTTCAGTTTAGAATTGTGCATTGTGAGTGTTaGATCTTTTTAGTCTCCTTCAATCTAGAATGGTGCCTCAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: PLEQRFQFRIVHCEC*IFLVSFNLEWCLSP Trigger: AGGGCTGAGGCACCATTCTAGATTGAAGGAGACTAAAAAGATGCAACACTCACAATGCACAATTCTAAACTGAAATCTTTGCTCTAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000651233.1 |
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| CDS TCA 72 bp | CTCTGCTCTCCCGCCATCGCAAGGGCGGCGCTGACCTaGGGCCTCCCCGCAAAGGTCCCCGAGGCGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: LCSPAIARAALT*GLPAKVPEAAA Trigger: CGCCGCCGCCTCGGGGACCTTTGCGGGGAGGCCTCAGGTCAGCGCCGCCCTTGCGATGGCGGGAGAGCAGAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651233.1 |
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| CDS CCA 72 bp | CGGCGGCGGCGGGCTGTGAGAACCGCAGAAGAACGCTaGGCGCGCAGCGACCCGTCCACCCCCGCGAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: RRRRAVRTAEER*ARSDPSTPARR Trigger: TCTCCTCGCGGGGGTGGACGGGTCGCTGCGCGCCCAGCGTTCTTCTGCGGTTCTCACAGCCCGCCGCCGCCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000501855.6 ENST00000502162.2 ENST00000508309.2 ENST00000509921.2 ENST00000651233.1 ENST00000653411.1 |
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| CDS GCA 72 bp | TCCAGCCGGCGCACGAAGGGGAGGAGGGCAGGAGGCTaGCGCCCGCACAGGTCATCTGATCACGTCGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: SSRRTKGRRAGG*RPHRSSDHVAR Trigger: GCGGGCGACGTGATCAGATGACCTGTGCGGGCGGCAGCCTCCTGCCCTCCTCCCCTTCGTGCGCCGGCTGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653411.1 |
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| CDS CCA 72 bp | TGCCCTGCGGACCGGGTAGGGTGCGGAGGTCGGGAATaGAGAACGGTCGTTGGGCAGGTCCGGGTACCCGTA | + |
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Preference number: 6 (lower is better) Translates to: CPADRVGCGGRE*RTVVGQVRVPV Trigger: TACGGGTACCCGGACCTGCCCAACGACCGTTCTCCATTCCCGACCTCCGCACCCTACCCGGTCCGCAGGGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000501937.2 ENST00000651233.1 ENST00000657229.1 ENST00000659497.1 ENST00000659553.1 ENST00000662722.1 ENST00000667360.1 |
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| CDS GCA 72 bp | GAGAGAGGAGGAAGGTGCCCTGCGGACCGGGTAGGGTaGGGAGGTCGGGAATGGAGAACGGTCGTTGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: ERGGRCPADRVG*GGREWRTVVGQ Trigger: CTGCCCAACGACCGTTCTCCATTCCCGACCTCCGCACCCTACCCGGTCCGCAGGGCACCTTCCTCCTCTCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000501937.2 ENST00000651233.1 ENST00000657229.1 ENST00000659497.1 ENST00000659553.1 ENST00000661298.1 ENST00000661810.1 ENST00000662722.1 ENST00000667360.1 |
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| CDS CCA 72 bp | GGTAGGGTGCGGAGGTCGGGAATGGAGAACGGTCGTTaGGCAGGTCCGGGTACCCGTAGCCAGAACCACCCG | + |
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Preference number: 6 (lower is better) Translates to: GRVRRSGMENGR*AGPGTRSQNHP Trigger: CGGGTGGTTCTGGCTACGGGTACCCGGACCTGCCCAACGACCGTTCTCCATTCCCGACCTCCGCACCCTACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000501937.2 ENST00000651233.1 ENST00000657229.1 ENST00000659497.1 ENST00000659553.1 ENST00000662722.1 ENST00000667360.1 |
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| CDS CAA 72 bp | CAGCCTGGTCACAGGGGTCTGGGAAAGACAGAGGCTTaGTTAGAGCCGGCAGCTGAGGGCCGAGGCCGAGCA | + |
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Preference number: 6 (lower is better) Translates to: QPGHRGLGKTEA*LEPAAEGRGRA Trigger: TGCTCGGCCTCGGCCCTCAGCTGCCGGCTCTAACAAAGCCTCTGTCTTTCCCAGACCCCTGTGACCAGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000501855.6 ENST00000651233.1 ENST00000657229.1 ENST00000659497.1 ENST00000661298.1 ENST00000661444.1 |
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| CDS TCA 72 bp | CATAGGCCGGTTCTAATTTACAAGAACACCGCGGCCTaGGGCCGGAGAGTCCCTTCAACCCGGGAGGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: HRPVLIYKNTAA*GRRVPSTREAA Trigger: CGCCGCCTCCCGGGTTGAAGGGACTCTCCGGCCTCAGGCCGCGGTGTTCTTGTAAATTAGAACCGGCCTATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501937.2 ENST00000651233.1 ENST00000659553.1 |
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| CDS CCA 72 bp | AGAAAGACCGACCTGGAAGGCACCAGCATGTGCACGTaGCAACTGAGGTCGAGGACGTGCCTGAGGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RKTDLEGTSMCT*QLRSRTCLRPP Trigger: GGGAGGCCTCAGGCACGTCCTCGACCTCAGTTGCCACGTGCACATGCTGGTGCCTTCCAGGTCGGTCTTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000501855.6 |
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| CDS CAA 72 bp | CTGCTGGGCCTCTCTCCGCAGCCGCGAGACCCGCGCTaGGCGCATAGGCCGGTTCTAATTTACAAGAACACC | + |
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Preference number: 6 (lower is better) Translates to: LLGLSPQPRDPR*AHRPVLIYKNT Trigger: GGTGTTCTTGTAAATTAGAACCGGCCTATGCGCCAAGCGCGGGTCTCGCGGCTGCGGAGAGAGGCCCAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000501937.2 ENST00000651233.1 ENST00000659553.1 |
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| CDS CAA 90 bp | ACTATACTCCAGCCTGGTCACAGGGGTCTGGGAAAGACAGAGGCTTaGTTAGAGCCGGCAGCTGAGGGCCGAGGCCGAGCAGGGGTTAGG | + |
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Preference number: 6 (lower is better) Translates to: TILQPGHRGLGKTEA*LEPAAEGRGRAGVR Trigger: CCTAACCCCTGCTCGGCCTCGGCCCTCAGCTGCCGGCTCTAACAAAGCCTCTGTCTTTCCCAGACCCCTGTGACCAGGCTGGAGTATAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000501855.6 ENST00000651233.1 ENST00000657229.1 ENST00000659497.1 ENST00000661298.1 ENST00000661444.1 |
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| CDS CCA 72 bp | CCTGACTGGTACCTGGAAGGCACCAGCATGTGCACGTaGCAACTGAGGTCGAGGACGTGCCTGAGAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: PDWYLEGTSMCT*QLRSRTCLRER Trigger: CCTCTCTCTCAGGCACGTCCTCGACCTCAGTTGCCACGTGCACATGCTGGTGCCTTCCAGGTACCAGTCAGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661810.1 ENST00000667360.1 |
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| CDS GCA 72 bp | ACCAGTCCTGACTGGTACCTGGAAGGCACCAGCATGTaGACGTGGCAACTGAGGTCGAGGACGTGCCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: TSPDWYLEGTSM*TWQLRSRTCLR Trigger: TCTCAGGCACGTCCTCGACCTCAGTTGCCACGTGCACATGCTGGTGCCTTCCAGGTACCAGTCAGGACTGGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661810.1 ENST00000667360.1 |
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| CDS CCA 72 bp | CTATACTCCAGCCTGGAAGGCACCAGCATGTGCACGTaGCAACTGAGGTCGAGGACGTGCCTGAGAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LYSSLEGTSMCT*QLRSRTCLRER Trigger: CCTCTCTCTCAGGCACGTCCTCGACCTCAGTTGCCACGTGCACATGCTGGTGCCTTCCAGGCTGGAGTATAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000501937.2 ENST00000509921.2 ENST00000659553.1 ENST00000662722.1 |
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| CDS CCA 72 bp | AGAAAGACCGACCTGGAAGGCACCAGCATGTGCACGTaGCAACTGAGGTCGAGGACGTGCCTGAGAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: RKTDLEGTSMCT*QLRSRTCLRER Trigger: CCTCTCTCTCAGGCACGTCCTCGACCTCAGTTGCCACGTGCACATGCTGGTGCCTTCCAGGTCGGTCTTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000651233.1 ENST00000657229.1 ENST00000659497.1 ENST00000661298.1 ENST00000661444.1 |
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| CDS TCA 72 bp | GACCCTGATGGTGGTGGCTTAGGCAAGATGAACGTCTaGAATGGAGGCCCAGGGCTGCCACGATGGCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: DPDGGGLGKMNV*NGGPGLPRWLC Trigger: ACAGAGCCATCGTGGCAGCCCTGGGCCTCCATTTCAGACGTTCATCTTGCCTAAGCCACCACCATCAGGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652659.1 |
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| CDS GCA 72 bp | TACTCACCTCACTTGGGCAGTGACACCCTCACTCCCTaGATGGTCCCCTCTTCACCTTGCTTGGGCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: YSPHLGSDTLTP*MVPSSPCLGTE Trigger: CTCAGTGCCCAAGCAAGGTGAAGAGGGGACCATGCAGGGAGTGAGGGTGTCACTGCCCAAGTGAGGTGAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651233.1 |
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| CDS CCA 72 bp | GATTCTGTGTGTCTGGAAGGCACCAGCATGTGCACGTaGCAACTGAGGTCGAGGACGTGCCTGAGAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: DSVCLEGTSMCT*QLRSRTCLRER Trigger: CCTCTCTCTCAGGCACGTCCTCGACCTCAGTTGCCACGTGCACATGCTGGTGCCTTCCAGACACACAGAATC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658585.1 |
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| CDS TCA 72 bp | GGTTCACGCGGGACCCTCTTCCCTGTGGCAAGCTGCTaGAGGAGACCTGCTGTTACTGCTTTAGCTGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: GSRGTLFPVASC*RRPAVTALAAV Trigger: AACAGCAGCTAAAGCAGTAACAGCAGGTCTCCTTCAGCAGCTTGCCACAGGGAAGAGGGTCCCGCGTGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000652659.1 ENST00000654313.1 ENST00000658025.1 ENST00000660674.1 |
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| CDS GCA 72 bp | GATGCAGATTCTGTGTGTCTGGAAGGCACCAGCATGTaGACGTGGCAACTGAGGTCGAGGACGTGCCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: DADSVCLEGTSM*TWQLRSRTCLR Trigger: TCTCAGGCACGTCCTCGACCTCAGTTGCCACGTGCACATGCTGGTGCCTTCCAGACACACAGAATCTGCATC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658585.1 |
||
| CDS CCA 72 bp | CATCTGCAAGCTGGAGAATCAGAGAAGCCGGTGGCATaGCCTGATCCAAGTTGGAAGGCCCACCTGCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HLQAGESEKPVA*PDPSWKAHLLL Trigger: CAGAAGCAGGTGGGCCTTCCAACTTGGATCAGGCCATGCCACCGGCTTCTCTGATTCTCCAGCTTGCAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000508309.2 ENST00000652659.1 ENST00000661298.1 ENST00000662722.1 ENST00000667360.1 |
||
| CDS TCA 72 bp | GCAAGCTGGAGAATCAGAGAAGCCGGTGGCATGGCCTaGTCCAAGTTGGAAGGCCTGAGAAACAAGGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ASWRIREAGGMA*SKLEGLRNKEA Trigger: TGCCTCCTTGTTTCTCAGGCCTTCCAACTTGGATCAGGCCATGCCACCGGCTTCTCTGATTCTCCAGCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000509921.2 ENST00000653411.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661444.1 ENST00000661810.1 ENST00000665473.1 |
||
| CDS GCA 72 bp | AAGGCTAAAGGCTTGAGAGCCCCAGAGGGCCACTGGTaGAAGTGTCAGAGTCCAAAGGCCAAAGGACCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: KAKGLRAPEGHW*KCQSPKAKGPR Trigger: TCTAGGTCCTTTGGCCTTTGGACTCTGACACTTGCACCAGTGGCCCTCTGGGGCTCTCAAGCCTTTAGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000509921.2 ENST00000653411.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661444.1 ENST00000661810.1 ENST00000665473.1 |
||
| CDS CCA 72 bp | AGGCTGGCAAGTCCAAGATCAAGGTGCAGGCAGATCTaGTGTCTGAGGAAAGCCCACCTGCTTCTGGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RLASPRSRCRQI*CLRKAHLLLVC Trigger: GCAAACCAGAAGCAGGTGGGCTTTCCTCAGACACCAGATCTGCCTGCACCTTGATCTTGGACTTGCCAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000509921.2 ENST00000653411.1 ENST00000653584.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661444.1 ENST00000661810.1 ENST00000665473.1 |
||
| CDS CCA 72 bp | TTCAAGGCTAAAGGCTTGAGAGCCCCAGAGGGCCACTaGTGCAAGTGTCAGAGTCCAAAGGCCAAAGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: FKAKGLRAPEGH*CKCQSPKAKGP Trigger: AGGTCCTTTGGCCTTTGGACTCTGACACTTGCACCAGTGGCCCTCTGGGGCTCTCAAGCCTTTAGCCTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000509921.2 ENST00000653411.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661444.1 ENST00000661810.1 ENST00000665473.1 |
||
| CDS CCA 72 bp | CATCTGCAAGCTGGAGAATCAGAGAAGCCGGTGGCATaGCCTGATCCAAGTTGGAAGGCCAAGCCATGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: HLQAGESEKPVA*PDPSWKAKPCY Trigger: GTAGCATGGCTTGGCCTTCCAACTTGGATCAGGCCATGCCACCGGCTTCTCTGATTCTCCAGCTTGCAGATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653584.1 |
||
| CDS CCA 72 bp | AGGCTGGCAAGTCCAAGATCAAGGTGCAGGCACATCTaGTGTCTGATGAGGGTCCACCCGCTTTCTGATTTG | + |
|
Preference number: 6 (lower is better) Translates to: RLASPRSRCRHI*CLMRVHPLSDL Trigger: CAAATCAGAAAGCGGGTGGACCCTCATCAGACACCAGATGTGCCTGCACCTTGATCTTGGACTTGCCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000508309.2 ENST00000509921.2 ENST00000651233.1 ENST00000652659.1 ENST00000653411.1 ENST00000653584.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000660674.1 ENST00000661298.1 ENST00000661444.1 ENST00000661810.1 ENST00000662722.1 ENST00000665473.1 ENST00000667360.1 |
||
| CDS CCA 72 bp | GGCTGCTGGGCCCCAGAGTTTCTGATGCAGGAAGTCTaGGTGGCTGAGAATTTGCATGGTTACAAGTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GCWAPEFLMQEV*VAENLHGYKFL Trigger: CAGGAACTTGTAACCATGCAAATTCTCAGCCACCCAGACTTCCTGCATCAGAAACTCTGGGGCCCAGCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000502162.2 ENST00000658585.1 ENST00000661810.1 ENST00000667360.1 |
||
| CDS CCA 72 bp | TGCTGTTGGATTCATCTTCAGAGATGGGCCACACGGTaGTCTCGTTTCATGGCCCTCAGCCACTCACCAATG | + |
|
Preference number: 6 (lower is better) Translates to: CCWIHLQRWATR*SRFMALSHSPM Trigger: CATTGGTGAGTGGCTGAGGGCCATGAAACGAGACCACCGTGTGGCCCATCTCTGAAGATGAATCCAACAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651233.1 ENST00000660674.1 |
||
| CDS CAA 72 bp | CCTCTTGTGCCCCTTTCTTCCCTTGATCTAAGAAGGTaGCTCCGGATCTCGCCATCTGGCCTGCGTTCAATC | + |
|
Preference number: 6 (lower is better) Translates to: PLVPLSSLDLRR*LRISPSGLRSI Trigger: GATTGAACGCAGGCCAGATGGCGAGATCCGGAGCAACCTTCTTAGATCAAGGGAAGAAAGGGGCACAAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652659.1 |
||
| CDS TCA 72 bp | GCCGACATCTGTCATTCAGCTTCTTCCTACCGAGTGTaGGGTGCCACACTCTTCAGTTGCTGCTCACAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: ADICHSASSYRV*GATLFSCCSQS Trigger: TGACTGTGAGCAGCAACTGAAGAGTGTGGCACCTCACACTCGGTAGGAAGAAGCTGAATGACAGATGTCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651233.1 ENST00000660674.1 |
||
| CDS CCA 72 bp | TGTCAGAGTCCAAAGGCCAAAGGACCTAGAGTTGTGTaGTACAAGGGCATGAGAAGGGTGTCACAGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CQSPKAKGPRVV*YKGMRRVSQLW Trigger: CCAGAGCTGTGACACCCTTCTCATGCCCTTGTACCACACAACTCTAGGTCCTTTGGCCTTTGGACTCTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000509921.2 ENST00000653411.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661444.1 ENST00000661810.1 ENST00000665473.1 |
||
| CDS CAA 90 bp | TGCAGGCACATCTGGTGTCTGATGAGGGTCCACCCGCTTTCTGATTaGCTGAGGACAGTCTTCTTGTGGTATTCTCACATGGCAGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: CRHIWCLMRVHPLSD*LRTVFLWYSHMAES Trigger: GCTCTCTGCCATGTGAGAATACCACAAGAAGACTGTCCTCAGCAAATCAGAAAGCGGGTGGACCCTCATCAGACACCAGATGTGCCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000508309.2 ENST00000509921.2 ENST00000651233.1 ENST00000652659.1 ENST00000653411.1 ENST00000653584.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000660674.1 ENST00000661298.1 ENST00000661444.1 ENST00000661810.1 ENST00000662722.1 ENST00000665473.1 ENST00000667360.1 |
||
| CDS CAA 90 bp | TTCTTGAGGGAAACTTTAACAGAGCCCAAGAACAGGACCTTGTACTaGAAGGTGCATCAGCTGAAACAGGAGGCTCGGAGGAGGGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FLRETLTEPKNRTLY*KVHQLKQEARRRAA Trigger: AGCCGCCCTCCTCCGAGCCTCCTGTTTCAGCTGATGCACCTTCAAGTACAAGGTCCTGTTCTTGGGCTCTGTTAAAGTTTCCCTCAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651233.1 ENST00000660674.1 |
||
| CDS CAA 90 bp | CTGCGATGGTCTGAATGTGTCTCCCAACATTCATGTGTTAGAAACTaGGTCCCCACCAGCTATATGGAGGCTGAGGTGGGAGGATCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LRWSECVSQHSCVRN*VPTSYMEAEVGGSL Trigger: AAGCGATCCTCCCACCTCAGCCTCCATATAGCTGGTGGGGACCAAGTTTCTAACACATGAATGTTGGGAGACACATTCAGACCATCGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 22 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000508309.2 ENST00000509921.2 ENST00000651233.1 ENST00000652659.1 ENST00000653411.1 ENST00000653584.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000660674.1 ENST00000661298.1 ENST00000661444.1 ENST00000661810.1 ENST00000662722.1 ENST00000665473.1 ENST00000667360.1 |
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| CDS CAA 90 bp | TGGGCCCCAGAGTTTCTGATGCAGGAAGTCTGGGTGGCTGAGAATTaGCATGGTTACAAGTTCCTGGGTGATGCAGATTCTGTGTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: WAPEFLMQEVWVAEN*HGYKFLGDADSVCL Trigger: CAGACACACAGAATCTGCATCACCCAGGAACTTGTAACCATGCAAATTCTCAGCCACCCAGACTTCCTGCATCAGAAACTCTGGGGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000502162.2 ENST00000658585.1 ENST00000661810.1 ENST00000667360.1 |
||
| CDS CAA 90 bp | AGAATGGTGCCTCAGCCCTTCCTCAACTTTCATGACTTTTCAAAATaGCCCTACTCACCTCACTTGGGCAGTGACACCCTCACTCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RMVPQPFLNFHDFSK*PYSPHLGSDTLTPC Trigger: GCAGGGAGTGAGGGTGTCACTGCCCAAGTGAGGTGAGTAGGGCAATTTTGAAAAGTCATGAAAGTTGAGGAAGGGCTGAGGCACCATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651233.1 |
||
| CDS TCA 72 bp | GCCTCAGTATCACCAGGGCAGCATGTGAGAGGAAGTTaGGGCAGTATCTTGGCACTGTTTTTAGCCACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASVSPGQHVRGS*GSILALFLATA Trigger: AGCAGTGGCTAAAAACAGTGCCAAGATACTGCCTCAACTTCCTCTCACATGCTGCCCTGGTGATACTGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000651233.1 |
||
| CDS GCA 72 bp | CCTGATCCAAGTTGGAAGGCCCACCTGCTTCTGGTTTaGAGATGGCAGTCTTTGTGTGGTAGTCTTACATGG | + |
|
Preference number: 6 (lower is better) Translates to: PDPSWKAHLLLV*RWQSLCGSLTW Trigger: CCATGTAAGACTACCACACAAAGACTGCCATCTGCAAACCAGAAGCAGGTGGGCCTTCCAACTTGGATCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000508309.2 ENST00000652659.1 ENST00000661298.1 ENST00000662722.1 ENST00000667360.1 |
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| CDS GCA 72 bp | CATCTGTCATTCAGCTTCTTCCTACCGAGTGTGAGGTaGCACACTCTTCAGTTGCTGCTCACAGTCAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: HLSFSFFLPSVR*HTLQLLLTVKP Trigger: AGGCTTGACTGTGAGCAGCAACTGAAGAGTGTGGCACCTCACACTCGGTAGGAAGAAGCTGAATGACAGATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651233.1 ENST00000660674.1 |
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| CDS GCA 72 bp | GTGGCATGGCCTGATCCAAGTTGGAAGGCCAAGCCATaGTACCATTTCTTTCTTAGAGTTCTGAAGGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VAWPDPSWKAKP*YHFFLRVLKAG Trigger: GCCAGCCTTCAGAACTCTAAGAAAGAAATGGTAGCATGGCTTGGCCTTCCAACTTGGATCAGGCCATGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653584.1 |
||
| CDS CCA 72 bp | CATGGCCTGATCCAAGTTGGAAGGCCCACCTGCTTCTaGTTTGCAGATGGCAGTCTTTGTGTGGTAGTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: HGLIQVGRPTCF*FADGSLCVVVL Trigger: TAAGACTACCACACAAAGACTGCCATCTGCAAACCAGAAGCAGGTGGGCCTTCCAACTTGGATCAGGCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000508309.2 ENST00000652659.1 ENST00000661298.1 ENST00000662722.1 ENST00000667360.1 |
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| CDS TCA 72 bp | AGGCCAAAGGACCTAGAGTTGTGTGGTACAAGGGCATaGGAAGGGTGTCACAGCTCTGGAAGAGAGAATTCA | + |
|
Preference number: 6 (lower is better) Translates to: RPKDLELCGTRA*EGCHSSGRENS Trigger: TGAATTCTCTCTTCCAGAGCTGTGACACCCTTCTCATGCCCTTGTACCACACAACTCTAGGTCCTTTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000509921.2 ENST00000653411.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661444.1 ENST00000661810.1 ENST00000665473.1 |
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| CDS TCA 72 bp | TTTGTTAAAACACAGGCTGCTGGGCCCCAGAGTTTCTaGTGCAGGAAGTCTGGGTGGCTGAGAATTTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: FVKTQAAGPQSF*CRKSGWLRICM Trigger: CATGCAAATTCTCAGCCACCCAGACTTCCTGCATCAGAAACTCTGGGGCCCAGCAGCCTGTGTTTTAACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000502162.2 ENST00000658585.1 ENST00000661810.1 ENST00000667360.1 |
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| CDS TCA 72 bp | AGGCCAAGCCATGCTACCATTTCTTTCTTAGAGTTCTaGAGGCTGGCAAGTCCAAGATCAAGGTGCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RPSHATISFLEF*RLASPRSRCRQ Trigger: CTGCCTGCACCTTGATCTTGGACTTGCCAGCCTTCAGAACTCTAAGAAAGAAATGGTAGCATGGCTTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653584.1 |
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| CDS GCA 72 bp | AGTCTCCTCCAAAAACATGGTCCTTCTCAGAAACAGTaGTTCCCCAGCCATCTAGGCATCCCTCAATCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SLLQKHGPSQKQ*FPSHLGIPQSC Trigger: ACAGGATTGAGGGATGCCTAGATGGCTGGGGAAGCACTGTTTCTGAGAAGGACCATGTTTTTGGAGGAGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 20 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000508309.2 ENST00000509921.2 ENST00000652659.1 ENST00000653411.1 ENST00000653584.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661298.1 ENST00000661444.1 ENST00000661810.1 ENST00000662722.1 ENST00000665473.1 ENST00000667360.1 |
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| CDS CAA 72 bp | GTCCACCCGCTTTCTGATTTGCTGAGGACAGTCTTCTaGTGGTATTCTCACATGGCAGAGAGCAAGCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VHPLSDLLRTVF*WYSHMAESKLL Trigger: CAAGAGCTTGCTCTCTGCCATGTGAGAATACCACAAGAAGACTGTCCTCAGCAAATCAGAAAGCGGGTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000508309.2 ENST00000509921.2 ENST00000651233.1 ENST00000652659.1 ENST00000653411.1 ENST00000653584.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000660674.1 ENST00000661298.1 ENST00000661444.1 ENST00000661810.1 ENST00000662722.1 ENST00000665473.1 ENST00000667360.1 |
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| CDS CAA 72 bp | GAAACTTTAACAGAGCCCAAGAACAGGACCTTGTACTaGAAGGTGCATCAGCTGAAACAGGAGGCTCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ETLTEPKNRTLY*KVHQLKQEARR Trigger: CCTCCGAGCCTCCTGTTTCAGCTGATGCACCTTCAAGTACAAGGTCCTGTTCTTGGGCTCTGTTAAAGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651233.1 ENST00000660674.1 |
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| CDS CAA 90 bp | CTGATGAGGGTCCACCCGCTTTCTGATTTGCTGAGGACAGTCTTCTaGTGGTATTCTCACATGGCAGAGAGCAAGCTCTTGTGTCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LMRVHPLSDLLRTVF*WYSHMAESKLLCLF Trigger: AAAGAGACACAAGAGCTTGCTCTCTGCCATGTGAGAATACCACAAGAAGACTGTCCTCAGCAAATCAGAAAGCGGGTGGACCCTCATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000508309.2 ENST00000509921.2 ENST00000651233.1 ENST00000652659.1 ENST00000653411.1 ENST00000653584.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000660674.1 ENST00000661298.1 ENST00000661444.1 ENST00000661810.1 ENST00000662722.1 ENST00000665473.1 ENST00000667360.1 |
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| CDS CAA 90 bp | TCATTCAGCTTCTTCCTACCGAGTGTGAGGTGCCACACTCTTCAGTaGCTGCTCACAGTCAAGCCTTACAGCTCAAAGCTCAGAGAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: SFSFFLPSVRCHTLQ*LLTVKPYSSKLREV Trigger: TACTTCTCTGAGCTTTGAGCTGTAAGGCTTGACTGTGAGCAGCAACTGAAGAGTGTGGCACCTCACACTCGGTAGGAAGAAGCTGAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651233.1 ENST00000660674.1 |
||
| CDS TCA 72 bp | AGACCAAGCCATGCTACCATTTCTTTCTTAGAGTTCTaGAGGCTGGCAAGTCCAAGATCAAGGTGCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RPSHATISFLEF*RLASPRSRCRQ Trigger: CTGCCTGCACCTTGATCTTGGACTTGCCAGCCTTCAGAACTCTAAGAAAGAAATGGTAGCATGGCTTGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000509921.2 ENST00000653411.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661444.1 ENST00000661810.1 ENST00000665473.1 |
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| CDS CAA 72 bp | TCTGAATGTGTCTCCCAACATTCATGTGTTAGAAACTaGGTCCCCACCAGCTATATGGAGGCTGAGGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SECVSQHSCVRN*VPTSYMEAEVG Trigger: TCCCACCTCAGCCTCCATATAGCTGGTGGGGACCAAGTTTCTAACACATGAATGTTGGGAGACACATTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 22 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000508309.2 ENST00000509921.2 ENST00000651233.1 ENST00000652659.1 ENST00000653411.1 ENST00000653584.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000660674.1 ENST00000661298.1 ENST00000661444.1 ENST00000661810.1 ENST00000662722.1 ENST00000665473.1 ENST00000667360.1 |
||
| CDS CAA 72 bp | ATCTGGTGTCTGATGAGGGTCCACCCGCTTTCTGATTaGCTGAGGACAGTCTTCTTGTGGTATTCTCACATG | + |
|
Preference number: 6 (lower is better) Translates to: IWCLMRVHPLSD*LRTVFLWYSHM Trigger: CATGTGAGAATACCACAAGAAGACTGTCCTCAGCAAATCAGAAAGCGGGTGGACCCTCATCAGACACCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000508309.2 ENST00000509921.2 ENST00000651233.1 ENST00000652659.1 ENST00000653411.1 ENST00000653584.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000660674.1 ENST00000661298.1 ENST00000661444.1 ENST00000661810.1 ENST00000662722.1 ENST00000665473.1 ENST00000667360.1 |
||
| CDS TCA 72 bp | CAGTCCACTGAGCAGGTATTCTCAAGTCTTTATCCTTaGACTCAGTTCCACCATGTGCTTGTTTCTCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QSTEQVFSSLYP*TQFHHVLVSQA Trigger: GGCCTGAGAAACAAGCACATGGTGGAACTGAGTTCAAGGATAAAGACTTGAGAATACCTGCTCAGTGGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000509921.2 ENST00000653411.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661444.1 ENST00000661810.1 ENST00000665473.1 |
||
| CDS CAA 72 bp | GAGTTTCTGATGCAGGAAGTCTGGGTGGCTGAGAATTaGCATGGTTACAAGTTCCTGGGTGATGCAGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: EFLMQEVWVAEN*HGYKFLGDADS Trigger: AGAATCTGCATCACCCAGGAACTTGTAACCATGCAAATTCTCAGCCACCCAGACTTCCTGCATCAGAAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000502162.2 ENST00000658585.1 ENST00000661810.1 ENST00000667360.1 |
||
| CDS CAA 72 bp | TTGAGGGAAACTTTAACAGAGCCCAAGAACAGGACCTaGTACTTGAAGGTGCATCAGCTGAAACAGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LRETLTEPKNRT*YLKVHQLKQEA Trigger: AGCCTCCTGTTTCAGCTGATGCACCTTCAAGTACAAGGTCCTGTTCTTGGGCTCTGTTAAAGTTTCCCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000651233.1 ENST00000660674.1 |
||
| CDS GCA 72 bp | TCTCAAGTCTTTATCCTTGAACTCAGTTCCACCATGTaGTTGTTTCTCAGGCCTTCCAACTTAGACCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: SQVFILELSSTM*LFLRPSNLDQA Trigger: GGCTTGGTCTAAGTTGGAAGGCCTGAGAAACAAGCACATGGTGGAACTGAGTTCAAGGATAAAGACTTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000509921.2 ENST00000653411.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661444.1 ENST00000661810.1 ENST00000665473.1 |
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| CDS CCA 72 bp | GTTTGCAGATGGCAGTCTTTGTGTGGTAGTCTTACATaGCAGAGAGAGAGAGCAAGCTTTTGTGTCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: VCRWQSLCGSLT*QRERASFCVSL Trigger: AAGAGAGACACAAAAGCTTGCTCTCTCTCTCTGCCATGTAAGACTACCACACAAAGACTGCCATCTGCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000508309.2 ENST00000509921.2 ENST00000652659.1 ENST00000653411.1 ENST00000653584.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661298.1 ENST00000661444.1 ENST00000661810.1 ENST00000662722.1 ENST00000665473.1 ENST00000667360.1 |
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| CDS CCA 72 bp | GGAGACTGTTGGAGATTATATTTCTTCTTGAGGGCCTaGATGCTGGTTTTCAGTTACGTAGTCTTCTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: GDCWRLYFFLRA*MLVFSYVVFSP Trigger: TGGGGAGAAGACTACGTAACTGAAAACCAGCATCCAGGCCCTCAAGAAGAAATATAATCTCCAACAGTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000651233.1 ENST00000660674.1 |
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| CDS CAA 72 bp | CAAGTCTTTATCCTTGAACTCAGTTCCACCATGTGCTaGTTTCTCAGGCCTTCCAACTTAGACCAAGCCATG | + |
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Preference number: 6 (lower is better) Translates to: QVFILELSSTMC*FLRPSNLDQAM Trigger: CATGGCTTGGTCTAAGTTGGAAGGCCTGAGAAACAAGCACATGGTGGAACTGAGTTCAAGGATAAAGACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000509921.2 ENST00000653411.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661444.1 ENST00000661810.1 ENST00000665473.1 |
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| CDS CCA 72 bp | AAACAACACACATTTCTTTCTTACTGTTCTGAAGGCTaGCAAGTCCAAGATCAAGGTGCAGGCACATCTGGT | + |
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Preference number: 6 (lower is better) Translates to: KQHTFLSYCSEG*QVQDQGAGTSG Trigger: ACCAGATGTGCCTGCACCTTGATCTTGGACTTGCCAGCCTTCAGAACAGTAAGAAAGAAATGTGTGTTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 22 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000508309.2 ENST00000509921.2 ENST00000651233.1 ENST00000652659.1 ENST00000653411.1 ENST00000653584.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000660674.1 ENST00000661298.1 ENST00000661444.1 ENST00000661810.1 ENST00000662722.1 ENST00000665473.1 ENST00000667360.1 |
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| CDS CAA 90 bp | AGGTATTCTCAAGTCTTTATCCTTGAACTCAGTTCCACCATGTGCTaGTTTCTCAGGCCTTCCAACTTAGACCAAGCCATGCTACCATTT | + |
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Preference number: 6 (lower is better) Translates to: RYSQVFILELSSTMC*FLRPSNLDQAMLPF Trigger: AAATGGTAGCATGGCTTGGTCTAAGTTGGAAGGCCTGAGAAACAAGCACATGGTGGAACTGAGTTCAAGGATAAAGACTTGAGAATACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000501855.6 ENST00000501937.2 ENST00000502162.2 ENST00000509921.2 ENST00000653411.1 ENST00000654313.1 ENST00000657229.1 ENST00000658025.1 ENST00000658585.1 ENST00000659497.1 ENST00000659553.1 ENST00000661444.1 ENST00000661810.1 ENST00000665473.1 |
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| CDS TCA 72 bp | GGTGATGCAGATTCTGTGTGTCTGGAGGTAACATTTTaGGAACTGCTGTTTCAGAAGTTCTCCACATTAAAG | + |
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Preference number: 6 (lower is better) Translates to: GDADSVCLEVTF*ELLFQKFSTLK Trigger: CTTTAATGTGGAGAACTTCTGAAACAGCAGTTCTCAAAATGTTACCTCCAGACACACAGAATCTGCATCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000502162.2 ENST00000661810.1 ENST00000667360.1 |
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| CDS CCA 72 bp | GAGTGTTGCATCTTTTTAGTCTCCTTCAATCTAGAATaGTGCCTCAGCCCTTCCTCAACTTTCATGACTTTT | + |
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Preference number: 6 (lower is better) Translates to: ECCIFLVSFNLE*CLSPSSTFMTF Trigger: AAAAGTCATGAAAGTTGAGGAAGGGCTGAGGCACCATTCTAGATTGAAGGAGACTAAAAAGATGCAACACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000651233.1 |
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| CDS CAA 72 bp | GCTTCTGATATGATGCCCCATCACCTCAGAATACTTTaGAGTGTGTATTTCCTACAAGAACCTCCTACATCA | + |
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Preference number: 6 (lower is better) Translates to: ASDMMPHHLRIL*SVYFLQEPPTS Trigger: TGATGTAGGAGGTTCTTGTAGGAAATACACACTCAAAAGTATTCTGAGGTGATGGGGCATCATATCAGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651233.1 |
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| CDS GCA 72 bp | TGTTGCATCTTTTTAGTCTCCTTCAATCTAGAATGGTaGCTCAGCCCTTCCTCAACTTTCATGACTTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: CCIFLVSFNLEW*LSPSSTFMTFQ Trigger: TTGAAAAGTCATGAAAGTTGAGGAAGGGCTGAGGCACCATTCTAGATTGAAGGAGACTAAAAAGATGCAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651233.1 |
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| CDS CAA 72 bp | GTAGGTAAACTGTGTCACAGGGATTTGGTGTTCAAATaGTTTCATCACCCAGGTAATAAGCATAGTACCCAA | + |
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Preference number: 6 (lower is better) Translates to: VGKLCHRDLVFK*FHHPGNKHSTQ Trigger: TTGGGTACTATGCTTATTACCTGGGTGATGAAACAATTTGAACACCAAATCCCTGTGACACAGTTTACCTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651233.1 |
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| CDS GCA 72 bp | AGCTCACCTTTCTGTAAAAGTCCACATACATCTTTCTaGATTCTTTCTAAGGGTTTCCTAGTACACTCATTG | + |
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Preference number: 6 (lower is better) Translates to: SSPFCKSPHTSF*ILSKGFLVHSL Trigger: CAATGAGTGTACTAGGAAACCCTTAGAAAGAATGCAGAAAGATGTATGTGGACTTTTACAGAAAGGTGAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651233.1 |
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| CDS CAA 72 bp | CAGGTTTGTTATGTAGGTAAACTGTGTCACAGGGATTaGGTGTTCAAATTGTTTCATCACCCAGGTAATAAG | + |
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Preference number: 6 (lower is better) Translates to: QVCYVGKLCHRD*VFKLFHHPGNK Trigger: CTTATTACCTGGGTGATGAAACAATTTGAACACCAAATCCCTGTGACACAGTTTACCTACATAACAAACCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651233.1 |
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| CDS GCA 72 bp | CAAAGATTTCAGTTTAGAATTGTGCATTGTGAGTGTTaGATCTTTTTAGTCTCCTTCAATCTAGAATGGTGC | + |
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Preference number: 6 (lower is better) Translates to: QRFQFRIVHCEC*IFLVSFNLEWC Trigger: GCACCATTCTAGATTGAAGGAGACTAAAAAGATGCAACACTCACAATGCACAATTCTAAACTGAAATCTTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000651233.1 |
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| CDS TCA 72 bp | AATAAGTCTTTCCATCTATCCCTAATGCAACAGCTGTaGGAGAACAAACATCTGTTCTATATAAATTACCCA | + |
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Preference number: 6 (lower is better) Translates to: NKSFHLSLMQQL*ENKHLFYINYP Trigger: TGGGTAATTTATATAGAACAGATGTTTGTTCTCTCACAGCTGTTGCATTAGGGATAGATGGAAAGACTTATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653584.1 |
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