Pregenerated sensors for LINC00845 (Homo sapiens)

Ensembl gene IDs: ENSG00000227244

Ensembl transcript IDs: ENST00000417931.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	TCGAGGAGAAAGAGAAGTTTCCTAGTAAATGAGCAGAGATTTGACTaGCCCAACAAAGAGTCTGTGTGGGTGCAGTTCCTGGCTCAGCTA	+
Preference number: 5 (lower is better) Translates to: SRRKRSFLVNEQRFD*PNKESVWVQFLAQL Trigger: TAGCTGAGCCAGGAACTGCACCCACACAGACTCTTTGTTGGGCCAGTCAAATCTCTGCTCATTTACTAGGAAACTTCTCTTTCTCCTCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417931.1
CDS CCA 72 bp	AAGAGAAGTTTCCTAGTAAATGAGCAGAGATTTGACTaGCCCAACAAAGAGTCTGTGTGGGTGCAGTTCCTG	+
Preference number: 6 (lower is better) Translates to: KRSFLVNEQRFD*PNKESVWVQFL Trigger: CAGGAACTGCACCCACACAGACTCTTTGTTGGGCCAGTCAAATCTCTGCTCATTTACTAGGAAACTTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417931.1
CDS CAA 72 bp	AATTGGGTCTTCTCTCAAAAACGTTTTACGCTTGAATaGAGTAGACACCCTCCAGACAGAAAGGTAAGCCGA	+
Preference number: 6 (lower is better) Translates to: NWVFSQKRFTLE*SRHPPDRKVSR Trigger: TCGGCTTACCTTTCTGTCTGGAGGGTGTCTACTCAATTCAAGCGTAAAACGTTTTTGAGAGAAGACCCAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000417931.1
CDS TCA 72 bp	AATCACTATGATCTGTTGTGGTGTAAGGTTTCTTGGTaGAGGAGCAGTGAAGACTCTGCAGATGTAGATGAT	+
Preference number: 6 (lower is better) Translates to: NHYDLLWCKVSW*RSSEDSADVDD Trigger: ATCATCTACATCTGCAGAGTCTTCACTGCTCCTTCACCAAGAAACCTTACACCACAACAGATCATAGTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000417931.1

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