Pregenerated sensors for LINC00844 (Homo sapiens)
Ensembl gene IDs: ENSG00000237949Ensembl transcript IDs: ENST00000432535.1, ENST00000653466.1, ENST00000654311.1, ENST00000657547.1, ENST00000657805.1, ENST00000660129.1, ENST00000660389.1, ENST00000661129.1, ENST00000661278.1, ENST00000661888.1, ENST00000666160.1, ENST00000666624.1, ENST00000667734.1, ENST00000669076.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCTGATTTCAATGTTCTCTGCGCCACCCCCATCCTCCTATCAGACTaGATCAAGCACTCACAGTCCAGCCAAACCACATTGGCATGGCTC | + |
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Preference number: 5 (lower is better) Translates to: SDFNVLCATPILLSD*IKHSQSSQTTLAWL Trigger: GAGCCATGCCAATGTGGTTTGGCTGGACTGTGAGTGCTTGATGCAGTCTGATAGGAGGATGGGGGTGGCGCAGAGAACATTGAAATCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000657547.1 ENST00000660389.1 ENST00000661888.1 ENST00000666624.1 |
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| CDS CCA 90 bp | CATGTTTCAGATGGCCTCAGCTGGCACACCTCAGCTCTGTGCCTGTaGTCTCTGTCCCTTCAGCAGGCTAGTCAGGGTTTAATCTTCATA | + |
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Preference number: 5 (lower is better) Translates to: HVSDGLSWHTSALCL*SLSLQQASQGLIFI Trigger: TATGAAGATTAAACCCTGACTAGCCTGCTGAAGGGACAGAGACCACAGGCACAGAGCTGAGGTGTGCCAGCTGAGGCCATCTGAAACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654311.1 ENST00000667734.1 |
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| CDS CCA 90 bp | TCCTATCAGACTGCATCAAGCACTCACAGTCCAGCCAAACCACATTaGCATGGCTCACTGCAGGCCTTTGAGCAGGGGCAGCATTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: SYQTASSTHSPAKPH*HGSLQAFEQGQHSF Trigger: AAAAGAATGCTGCCCCTGCTCAAAGGCCTGCAGTGAGCCATGCCAATGTGGTTTGGCTGGACTGTGAGTGCTTGATGCAGTCTGATAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660389.1 |
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| CDS TCA 90 bp | ATAGAGGCAAAGGTCAAGAGAAGGAGCAGAAGCAAGCACAGCTTTTaGGGCGTAGGCCTGGGACTGCATAGCATCACATCTGCTGCATTC | + |
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Preference number: 5 (lower is better) Translates to: IEAKVKRRSRSKHSF*GVGLGLHSITSAAF Trigger: GAATGCAGCAGATGTGATGCTATGCAGTCCCAGGCCTACGCCTCAAAAGCTGTGCTTGCTTCTGCTCCTTCTCTTGACCTTTGCCTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660129.1 ENST00000666160.1 |
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| CDS GCA 90 bp | CCTTTGTCTCTACAGAGCAGAATCCTTTCTGATTTCAATGTTCTCTaGGCCACCCCCATCCTCCTATCAGACTGCATCAAGCACTCACAG | + |
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Preference number: 5 (lower is better) Translates to: PLSLQSRILSDFNVL*ATPILLSDCIKHSQ Trigger: CTGTGAGTGCTTGATGCAGTCTGATAGGAGGATGGGGGTGGCGCAGAGAACATTGAAATCAGAAAGGATTCTGCTCTGTAGAGACAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000657547.1 ENST00000660389.1 ENST00000661888.1 ENST00000666624.1 |
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| CDS CCA 90 bp | TTGAACTTACAGTTCCACAGGACTGGGGAGGCCTCAAAATCATGGTaGAAGGTAAAGAGGAGCAAGTCACATCTTACGTGGATGGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LNLQFHRTGEASKSW*KVKRSKSHLTWMAA Trigger: TGCTGCCATCCACGTAAGATGTGACTTGCTCCTCTTTACCTTCCACCATGATTTTGAGGCCTCCCCAGTCCTGTGGAACTGTAAGTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000660389.1 ENST00000669076.1 |
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| CDS CCA 90 bp | TCAAAATCATGGTGGAAGGTAAAGAGGAGCAAGTCACATCTTACGTaGATGGCAGCAGGCAACAAAAGAGAGCTTGTGCAGGGAAACTCC | + |
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Preference number: 5 (lower is better) Translates to: SKSWWKVKRSKSHLT*MAAGNKRELVQGNS Trigger: GGAGTTTCCCTGCACAAGCTCTCTTTTGTTGCCTGCTGCCATCCACGTAAGATGTGACTTGCTCCTCTTTACCTTCCACCATGATTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000660389.1 ENST00000669076.1 |
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| CDS TCA 90 bp | AACCCAGGTTTGGAGGTACAGGAAGTAGACCTCAATGAGACCTCTTaGGTAGACTTCTTGATGGGAGGAGCTACAAAGTTACATCCCATG | + |
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Preference number: 5 (lower is better) Translates to: NPGLEVQEVDLNETS*VDFLMGGATKLHPM Trigger: CATGGGATGTAACTTTGTAGCTCCTCCCATCAAGAAGTCTACTCAAGAGGTCTCATTGAGGTCTACTTCCTGTACCTCCAAACCTGGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660129.1 ENST00000661278.1 |
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| CDS TCA 90 bp | TCTCAAAGCCAACCCAGGTTTGGAGGTACAGGAAGTAGACCTCAATaGGACCTCTTGAGTAGACTTCTTGATGGGAGGAGCTACAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: SQSQPRFGGTGSRPQ*DLLSRLLDGRSYKV Trigger: AACTTTGTAGCTCCTCCCATCAAGAAGTCTACTCAAGAGGTCTCATTGAGGTCTACTTCCTGTACCTCCAAACCTGGGTTGGCTTTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660129.1 ENST00000661278.1 |
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| CDS TCA 90 bp | CCATTCTTACTGTTCTCACATTCACAGTTAGCTGGTGGGTTCTGTTaGTCTTGGTCAGGCCTGGCTGAGCATTTCTTTGACCATAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: PFLLFSHSQLAGGFC*SWSGLAEHFFDHSH Trigger: ATGGCTATGGTCAAAGAAATGCTCAGCCAGGCCTGACCAAGATCAACAGAACCCACCAGCTAACTGTGAATGTGAGAACAGTAAGAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660129.1 |
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| CDS TCA 90 bp | TCCTATAGGTTGTTCTCACATTCACAGTTAGCTGGTGGGTTCTGTTaGTCTTGGTCAGGCCTGGCTGAGCATTTCTTTGACCATAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: SYRLFSHSQLAGGFC*SWSGLAEHFFDHSH Trigger: ATGGCTATGGTCAAAGAAATGCTCAGCCAGGCCTGACCAAGATCAACAGAACCCACCAGCTAACTGTGAATGTGAGAACAACCTATAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666160.1 ENST00000667734.1 |
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| CDS TCA 90 bp | CTTGTTTCCCTAGGGAAAGCTCAGCTTCCTCATATACTGTGTACGTaGTACAGTCCATGTGGCCTCCTAAGACGAGGGTCATCTTACATA | + |
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Preference number: 5 (lower is better) Translates to: LVSLGKAQLPHILCT*YSPCGLLRRGSSYI Trigger: TATGTAAGATGACCCTCGTCTTAGGAGGCCACATGGACTGTATCACGTACACAGTATATGAGGAAGCTGAGCTTTCCCTAGGGAAACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657805.1 |
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| CDS GCA 90 bp | GACAGTTTCTTTCTTAAATTGGCCACCATACTCCATGATGGAAACTaGAAGACCTACCATGCCAGGGATTATCCTGCTCCCTCTTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: DSFFLKLATILHDGN*KTYHARDYPAPSFS Trigger: GGAGAAAGAGGGAGCAGGATAATCCCTGGCATGGTAGGTCTTGCAGTTTCCATCATGGAGTATGGTGGCCAATTTAAGAAAGAAACTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660129.1 |
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| CDS CCA 90 bp | CTTATTCTTTGTCTGTTTCAAGCTTTCTCAGAAGCAGCAGCTCCATaGGAACAGGCATTTGCTGTCACACGTCAGGTATTTAGGCGTCTG | + |
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Preference number: 5 (lower is better) Translates to: LILCLFQAFSEAAAP*EQAFAVTRQVFRRL Trigger: CAGACGCCTAAATACCTGACGTGTGACAGCAAATGCCTGTTCCCATGGAGCTGCTGCTTCTGAGAAAGCTTGAAACAGACAAAGAATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000653466.1 ENST00000661888.1 ENST00000666624.1 |
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| CDS CCA 90 bp | TTATTGAACTTACAGTTCCACAGGACTGGGGAGGCCTCAAAATCATaGTGGAAGGTAAAGAGGAGCAAGTCACATCTTACGTGGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: LLNLQFHRTGEASKS*WKVKRSKSHLTWMA Trigger: TGCCATCCACGTAAGATGTGACTTGCTCCTCTTTACCTTCCACCATGATTTTGAGGCCTCCCCAGTCCTGTGGAACTGTAAGTTCAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000660389.1 ENST00000669076.1 |
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| CDS TCA 90 bp | CTGTGCTGTCTCAGGGCTGTATACATTTGCCACACAGCAGCACAATaGGTCCATGTTATTACATATGAAGGCTTGGGATTATGCCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: LCCLRAVYICHTAAQ*VHVITYEGLGLCLS Trigger: GGAAAGGCATAATCCCAAGCCTTCATATGTAATAACATGGACTCATTGTGCTGCTGTGTGGCAAATGTATACAGCCCTGAGACAGCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657547.1 |
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| CDS CCA 90 bp | CTTATTCTTTGTCTGTTTCAAGCTTTCTCAGAAGCAGCAGCTCCATaGGAACAGGCATTTGCTGTCACACGTCAGGTATTTAGGCGTTTG | + |
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Preference number: 5 (lower is better) Translates to: LILCLFQAFSEAAAP*EQAFAVTRQVFRRL Trigger: CAAACGCCTAAATACCTGACGTGTGACAGCAAATGCCTGTTCCCATGGAGCTGCTGCTTCTGAGAAAGCTTGAAACAGACAAAGAATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660389.1 |
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| CDS TCA 90 bp | AGATTTTCTTCCTATAGGTATTCACAGTTAGCTGGTGGGTTCTGTTaGTCTTGGTCAGGCCTGGCTGAGCATTTCTTTGACCATAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: RFSSYRYSQLAGGFC*SWSGLAEHFFDHSH Trigger: ATGGCTATGGTCAAAGAAATGCTCAGCCAGGCCTGACCAAGATCAACAGAACCCACCAGCTAACTGTGAATACCTATAGGAAGAAAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654311.1 |
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| CDS GCA 90 bp | TATCACCGTGTGACCCTAAGAAAATCACCTGGGGTCTCCTTCCATTaGCACATCTATATAAATGAGGGTATCCAGATTCACTCTAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: YHRVTLRKSPGVSFH*HIYINEGIQIHSKA Trigger: GGCTTTAGAGTGAATCTGGATACCCTCATTTATATAGATGTGGCAATGGAAGGAGACCCCAGGTGATTTTCTTAGGGTCACACGGTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660129.1 |
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| CDS TCA 90 bp | TTCAGGATTGTCTGGCATTTAGACAGCACAATGCCACAATCACAGTaGGGAGATTTTTCTGGGATCTGTTTCCAGGACAGTTTCTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: FRIVWHLDSTMPQSQ*GDFSGICFQDSFFL Trigger: AAGAAAGAAACTGTCCTGGAAACAGATCCCAGAAAAATCTCCTCACTGTGATTGTGGCATTGTGCTGTCTAAATGCCAGACAATCCTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660129.1 |
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| CDS TCA 90 bp | GTATTTAGTTCATGTAGAGATGAGCGGGCTCCATTTCTCCTAGACTaGGCTACCATTATCTCCACACCCACTCTATCCTTTTTCATTTCT | + |
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Preference number: 5 (lower is better) Translates to: VFSSCRDERAPFLLD*ATIISTPTLSFFIS Trigger: AGAAATGAAAAAGGATAGAGTGGGTGTGGAGATAATGGTAGCTCAGTCTAGGAGAAATGGAGCCCGCTCATCTCTACATGAACTAAATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657805.1 |
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| CDS TCA 90 bp | ATACATTTGCCACACAGCAGCACAATGAGTCCATGTTATTACATATaGAGGCTTGGGATTATGCCTTTCCATATGAAATGCATAAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: IHLPHSSTMSPCYYI*RLGIMPFHMKCISK Trigger: TTTGCTTATGCATTTCATATGGAAAGGCATAATCCCAAGCCTTCATATGTAATAACATGGACTCATTGTGCTGCTGTGTGGCAAATGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657547.1 |
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| CDS CCA 72 bp | GATGGCCTCAGCTGGCACACCTCAGCTCTGTGCCTGTaGTCTCTGTCCCTTCAGCAGGCTAGTCAGGGTTTA | + |
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Preference number: 6 (lower is better) Translates to: DGLSWHTSALCL*SLSLQQASQGL Trigger: TAAACCCTGACTAGCCTGCTGAAGGGACAGAGACCACAGGCACAGAGCTGAGGTGTGCCAGCTGAGGCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654311.1 ENST00000667734.1 |
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| CDS CCA 72 bp | GCCATCTCTCTCTCCCATGTTTCAGATGGCCTCAGCTaGCACACCTCAGCTCTGTGCCTGTGGTCTCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: AISLSHVSDGLS*HTSALCLWSLS Trigger: GGACAGAGACCACAGGCACAGAGCTGAGGTGTGCCAGCTGAGGCCATCTGAAACATGGGAGAGAGAGATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654311.1 ENST00000660129.1 ENST00000666160.1 ENST00000667734.1 |
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| CDS CAA 90 bp | CTGGTGGGTTCTGTTGATCTTGGTCAGGCCTGGCTGAGCATTTCTTaGACCATAGCCATCTCTCTCTCCCATGTTTCAGATGGCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: LVGSVDLGQAWLSIS*TIAISLSHVSDGLS Trigger: GCTGAGGCCATCTGAAACATGGGAGAGAGAGATGGCTATGGTCAAAGAAATGCTCAGCCAGGCCTGACCAAGATCAACAGAACCCACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654311.1 ENST00000660129.1 ENST00000666160.1 ENST00000667734.1 |
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| CDS GCA 72 bp | TGGAAACTGCAAGACCTACCATGCCAGGGATTATCCTaGTCCCTCTTTCTCCTCTCAGTGACCAACCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: WKLQDLPCQGLS*SLFLLSVTNLS Trigger: TGAGAGGTTGGTCACTGAGAGGAGAAAGAGGGAGCAGGATAATCCCTGGCATGGTAGGTCTTGCAGTTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660129.1 |
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| CDS GCA 72 bp | CTCACAGTCCAGCCAAACCACATTGGCATGGCTCACTaGAGGCCTTTGAGCAGGGGCAGCATTCTTTTAAAT | + |
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Preference number: 6 (lower is better) Translates to: LTVQPNHIGMAH*RPLSRGSILLN Trigger: ATTTAAAAGAATGCTGCCCCTGCTCAAAGGCCTGCAGTGAGCCATGCCAATGTGGTTTGGCTGGACTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660389.1 |
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| CDS TCA 72 bp | CTAGGGAAAGCTCAGCTTCCTCATATACTGTGTACGTaGTACAGTCCATGTGGCCTCCTAAGACGAGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: LGKAQLPHILCT*YSPCGLLRRGS Trigger: TGACCCTCGTCTTAGGAGGCCACATGGACTGTATCACGTACACAGTATATGAGGAAGCTGAGCTTTCCCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657805.1 |
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| CDS CAA 90 bp | GGTCGCCTTTTCCAGAATCAGACTGTAGAATCACTGTTCACTCTATaGCGTGTGTTGCCTTGTGAGAGAGCGATTGCTTCTGGGGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: GRLFQNQTVESLFTL*RVLPCERAIASGGE Trigger: TTCACCCCCAGAAGCAATCGCTCTCTCACAAGGCAACACACGCAATAGAGTGAACAGTGATTCTACAGTCTGATTCTGGAAAAGGCGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000653466.1 ENST00000660389.1 ENST00000661129.1 ENST00000661888.1 ENST00000666624.1 ENST00000669076.1 |
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| CDS CAA 72 bp | CAGACTGTAGAATCACTGTTCACTCTATTGCGTGTGTaGCCTTGTGAGAGAGCGATTGCTTCTGGGGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: QTVESLFTLLRV*PCERAIASGGE Trigger: TTCACCCCCAGAAGCAATCGCTCTCTCACAAGGCAACACACGCAATAGAGTGAACAGTGATTCTACAGTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000653466.1 ENST00000660389.1 ENST00000661129.1 ENST00000661888.1 ENST00000666624.1 ENST00000669076.1 |
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| CDS CAA 90 bp | TGTTTCAAGCTTTCTCAGAAGCAGCAGCTCCATGGGAACAGGCATTaGCTGTCACACGTCAGGTATTTAGGCGTCTGTATAATACCAGGT | + |
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Preference number: 6 (lower is better) Translates to: CFKLSQKQQLHGNRH*LSHVRYLGVCIIPG Trigger: ACCTGGTATTATACAGACGCCTAAATACCTGACGTGTGACAGCAAATGCCTGTTCCCATGGAGCTGCTGCTTCTGAGAAAGCTTGAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653466.1 ENST00000661888.1 |
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| CDS CAA 90 bp | TGTTTCAAGCTTTCTCAGAAGCAGCAGCTCCATGGGAACAGGCATTaGCTGTCACACGTCAGGTATTTAGGCGTTTGCTTGAACCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: CFKLSQKQQLHGNRH*LSHVRYLGVCLNPN Trigger: ATTTGGGTTCAAGCAAACGCCTAAATACCTGACGTGTGACAGCAAATGCCTGTTCCCATGGAGCTGCTGCTTCTGAGAAAGCTTGAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660389.1 |
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| CDS CAA 90 bp | TGTTTCAAGCTTTCTCAGAAGCAGCAGCTCCATGGGAACAGGCATTaGCTGTCACACGTCAGGTATTTAGGCGTTGAAGTACTCCATTCA | + |
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Preference number: 6 (lower is better) Translates to: CFKLSQKQQLHGNRH*LSHVRYLGVEVLHS Trigger: TGAATGGAGTACTTCAACGCCTAAATACCTGACGTGTGACAGCAAATGCCTGTTCCCATGGAGCTGCTGCTTCTGAGAAAGCTTGAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661129.1 ENST00000669076.1 |
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| CDS TCA 72 bp | TGTGTTTCCTTTGTCTCTACAGAGCAGAATCCTTTCTaGTTTCAATGTTCTCTGCGCCACCCCCATCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CVSFVSTEQNPF*FQCSLRHPHPP Trigger: AGGAGGATGGGGGTGGCGCAGAGAACATTGAAATCAGAAAGGATTCTGCTCTGTAGAGACAAAGGAAACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000657547.1 ENST00000660389.1 ENST00000661888.1 ENST00000666624.1 |
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| CDS GCA 72 bp | TTTCTTAAATTGGCCACCATACTCCATGATGGAAACTaGAAGACCTACCATGCCAGGGATTATCCTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: FLKLATILHDGN*KTYHARDYPAP Trigger: GGGAGCAGGATAATCCCTGGCATGGTAGGTCTTGCAGTTTCCATCATGGAGTATGGTGGCCAATTTAAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660129.1 |
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| CDS CCA 72 bp | TGTCTGTTTCAAGCTTTCTCAGAAGCAGCAGCTCCATaGGAACAGGCATTTGCTGTCACACGTCAGGTATTT | + |
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Preference number: 6 (lower is better) Translates to: CLFQAFSEAAAP*EQAFAVTRQVF Trigger: AAATACCTGACGTGTGACAGCAAATGCCTGTTCCCATGGAGCTGCTGCTTCTGAGAAAGCTTGAAACAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000653466.1 ENST00000660389.1 ENST00000661129.1 ENST00000661888.1 ENST00000666624.1 ENST00000669076.1 |
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| CDS CCA 72 bp | GATGGGAGGAGCTACAAAGTTACATCCCATGGTGCTTaGATAGAGAGAAGAAAAGAATTGGAGCCCCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: DGRSYKVTSHGA*IERRKELEPLL Trigger: CAACAGGGGCTCCAATTCTTTTCTTCTCTCTATCCAAGCACCATGGGATGTAACTTTGTAGCTCCTCCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660129.1 |
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| CDS CAA 72 bp | TCACTCTATTGCGTGTGTTGCCTTGTGAGAGAGCGATaGCTTCTGGGGGTGAACAATAAAGAAAACCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: SLYCVCCLVRER*LLGVNNKENQR Trigger: CCTCTGGTTTTCTTTATTGTTCACCCCCAGAAGCAATCGCTCTCTCACAAGGCAACACACGCAATAGAGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000653466.1 ENST00000660389.1 ENST00000661129.1 ENST00000661888.1 ENST00000666624.1 ENST00000669076.1 |
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| CDS CAA 72 bp | CTACTAACCAAAGCAAGTCTCAAAGCCAACCCAGGTTaGGAGGTACAGGAAGTAGACCTCAATGAGACCTCT | + |
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Preference number: 6 (lower is better) Translates to: LLTKASLKANPG*EVQEVDLNETS Trigger: AGAGGTCTCATTGAGGTCTACTTCCTGTACCTCCAAACCTGGGTTGGCTTTGAGACTTGCTTTGGTTAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660129.1 |
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| CDS CAA 90 bp | AATCACTGTTCACTCTATTGCGTGTGTTGCCTTGTGAGAGAGCGATaGCTTCTGGGGGTGAACAATAAAGAAAACCAGAGGCAGAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: NHCSLYCVCCLVRER*LLGVNNKENQRQKR Trigger: TCTCTTCTGCCTCTGGTTTTCTTTATTGTTCACCCCCAGAAGCAATCGCTCTCTCACAAGGCAACACACGCAATAGAGTGAACAGTGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000653466.1 ENST00000660389.1 ENST00000661129.1 ENST00000661888.1 ENST00000666624.1 ENST00000669076.1 |
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| CDS CAA 90 bp | CTCAGTGACCAACCTCTCATTATAGCACCACTGACTAGCCAAGTGTaGCCACAAGAATGTTGCAAACAACCACCTCCAAAACTTAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LSDQPLIIAPLTSQV*PQECCKQPPPKLKR Trigger: CCTCTTAAGTTTTGGAGGTGGTTGTTTGCAACATTCTTGTGGCAACACTTGGCTAGTCAGTGGTGCTATAATGAGAGGTTGGTCACTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660129.1 |
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| CDS TCA 72 bp | GTCTGGCATTTAGACAGCACAATGCCACAATCACAGTaGGGAGATTTTTCTGGGATCTGTTTCCAGGACAGT | + |
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Preference number: 6 (lower is better) Translates to: VWHLDSTMPQSQ*GDFSGICFQDS Trigger: ACTGTCCTGGAAACAGATCCCAGAAAAATCTCCTCACTGTGATTGTGGCATTGTGCTGTCTAAATGCCAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660129.1 |
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| CDS CAA 90 bp | GGAGATTTTTCTGGGATCTGTTTCCAGGACAGTTTCTTTCTTAAATaGGCCACCATACTCCATGATGGAAACTGCAAGACCTACCATGCC | + |
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Preference number: 6 (lower is better) Translates to: GDFSGICFQDSFFLK*ATILHDGNCKTYHA Trigger: GGCATGGTAGGTCTTGCAGTTTCCATCATGGAGTATGGTGGCCAATTTAAGAAAGAAACTGTCCTGGAAACAGATCCCAGAAAAATCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660129.1 |
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| CDS TCA 72 bp | TTGGAGGTACAGGAAGTAGACCTCAATGAGACCTCTTaGGTAGACTTCTTGATGGGAGGAGCTACAAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: LEVQEVDLNETS*VDFLMGGATKL Trigger: TAACTTTGTAGCTCCTCCCATCAAGAAGTCTACTCAAGAGGTCTCATTGAGGTCTACTTCCTGTACCTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660129.1 ENST00000661278.1 |
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| CDS GCA 72 bp | GTGACCCTAAGAAAATCACCTGGGGTCTCCTTCCATTaGCACATCTATATAAATGAGGGTATCCAGATTCAC | + |
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Preference number: 6 (lower is better) Translates to: VTLRKSPGVSFH*HIYINEGIQIH Trigger: GTGAATCTGGATACCCTCATTTATATAGATGTGGCAATGGAAGGAGACCCCAGGTGATTTTCTTAGGGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660129.1 |
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| CDS CCA 72 bp | AGAAAGAGGTTTATTGAACTTACAGTTCCACAGGACTaGGGAGGCCTCAAAATCATGGTGGAAGGTAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: RKRFIELTVPQD*GGLKIMVEGKE Trigger: CTCTTTACCTTCCACCATGATTTTGAGGCCTCCCCAGTCCTGTGGAACTGTAAGTTCAATAAACCTCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660389.1 ENST00000669076.1 |
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| CDS CAA 72 bp | TTCCAGAATCAGACTGTAGAATCACTGTTCACTCTATaGCGTGTGTTGCCTTGTGAGAGAGCGATTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: FQNQTVESLFTL*RVLPCERAIAS Trigger: AGAAGCAATCGCTCTCTCACAAGGCAACACACGCAATAGAGTGAACAGTGATTCTACAGTCTGATTCTGGAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000653466.1 ENST00000660389.1 ENST00000661129.1 ENST00000661888.1 ENST00000666624.1 ENST00000669076.1 |
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| CDS CAA 72 bp | CAACCTCTCATTATAGCACCACTGACTAGCCAAGTGTaGCCACAAGAATGTTGCAAACAACCACCTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: QPLIIAPLTSQV*PQECCKQPPPK Trigger: TTTTGGAGGTGGTTGTTTGCAACATTCTTGTGGCAACACTTGGCTAGTCAGTGGTGCTATAATGAGAGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660129.1 |
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| CDS CAA 72 bp | AATAGCCTGATGGATGAATCTTCCGAAGTGATGTCCTaGGACAAATTGCCTAAATCTGGGTCAGCTTCATGG | + |
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Preference number: 6 (lower is better) Translates to: NSLMDESSEVMS*DKLPKSGSASW Trigger: CCATGAAGCTGACCCAGATTTAGGCAATTTGTCCAAGGACATCACTTCGGAAGATTCATCCATCAGGCTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660129.1 |
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| CDS TCA 72 bp | CTCAGGGCTGTATACATTTGCCACACAGCAGCACAATaGGTCCATGTTATTACATATGAAGGCTTGGGATTA | + |
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Preference number: 6 (lower is better) Translates to: LRAVYICHTAAQ*VHVITYEGLGL Trigger: TAATCCCAAGCCTTCATATGTAATAACATGGACTCATTGTGCTGCTGTGTGGCAAATGTATACAGCCCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657547.1 |
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| CDS CAA 72 bp | TCATCTCTAGTGAGGAGGTCATTTCTACCTTATTCTTaGTCTGTTTCAAGCTTTCTCAGAAGCAGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSLVRRSFLPYS*SVSSFLRSSSS Trigger: GGAGCTGCTGCTTCTGAGAAAGCTTGAAACAGACAAAGAATAAGGTAGAAATGACCTCCTCACTAGAGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000653466.1 ENST00000660389.1 ENST00000661129.1 ENST00000661888.1 ENST00000666624.1 ENST00000669076.1 |
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| CDS CAA 72 bp | CTTCAGCAGGCTAGTCAGGGTTTAATCTTCATAGCTTaGTCAGGTCCTGTAATTCCTGTAATTCTCAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LQQASQGLIFIA*SGPVIPVILRG Trigger: TCCTCTGAGAATTACAGGAATTACAGGACCTGACAAAGCTATGAAGATTAAACCCTGACTAGCCTGCTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654311.1 ENST00000667734.1 |
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| CDS CAA 72 bp | GGATGCCTGCAGAAAGATTTCTGTGCCAATGTGACCTaGGAAACTAAAAATGGATCACAGCTTTGGTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: GCLQKDFCANVT*ETKNGSQLWCL Trigger: CAAACACCAAAGCTGTGATCCATTTTTAGTTTCCAAGGTCACATTGGCACAGAAATCTTTCTGCAGGCATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657547.1 |
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| CDS CAA 90 bp | AGCTTCTTTTCATCTCTAGTGAGGAGGTCATTTCTACCTTATTCTTaGTCTGTTTCAAGCTTTCTCAGAAGCAGCAGCTCCATGGGAACA | + |
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Preference number: 6 (lower is better) Translates to: SFFSSLVRRSFLPYS*SVSSFLRSSSSMGT Trigger: TGTTCCCATGGAGCTGCTGCTTCTGAGAAAGCTTGAAACAGACAAAGAATAAGGTAGAAATGACCTCCTCACTAGAGATGAAAAGAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000653466.1 ENST00000660389.1 ENST00000661129.1 ENST00000661888.1 ENST00000666624.1 ENST00000669076.1 |
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| CDS CAA 90 bp | TCTCTGTCCCTTCAGCAGGCTAGTCAGGGTTTAATCTTCATAGCTTaGTCAGGTCCTGTAATTCCTGTAATTCTCAGAGGAAGTTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: SLSLQQASQGLIFIA*SGPVIPVILRGSLS Trigger: ACTTAAACTTCCTCTGAGAATTACAGGAATTACAGGACCTGACAAAGCTATGAAGATTAAACCCTGACTAGCCTGCTGAAGGGACAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654311.1 ENST00000667734.1 |
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| CDS TCA 72 bp | CATGATTATTATGACCCATGTTTATTTGACCAGTCCTaGCCAATACAGGACCTTCTCTGGAAACAGGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: HDYYDPCLFDQS*PIQDLLWKQGF Trigger: AAACCCCTGTTTCCAGAGAAGGTCCTGTATTGGTCAGGACTGGTCAAATAAACATGGGTCATAATAATCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657547.1 |
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| CDS CAA 90 bp | AAAAGGTGTATTTCCCAGATCCATGTCTATGTCTCTGTGTTTCCTTaGTCTCTACAGAGCAGAATCCTTTCTGATTTCAATGTTCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: KRCISQIHVYVSVFP*SLQSRILSDFNVLC Trigger: GCAGAGAACATTGAAATCAGAAAGGATTCTGCTCTGTAGAGACAAAGGAAACACAGAGACATAGACATGGATCTGGGAAATACACCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000657547.1 ENST00000660389.1 ENST00000661888.1 ENST00000666624.1 ENST00000667734.1 |
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| CDS CAA 90 bp | GAGGAGCTACAAAGTTACATCCCATGGTGTTTAATCTTCATAGCTTaGTCAGGTCCTGTAATTCCTGTAATTCTCAGAGGAAGTTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: EELQSYIPWCLIFIA*SGPVIPVILRGSLS Trigger: ACTTAAACTTCCTCTGAGAATTACAGGAATTACAGGACCTGACAAAGCTATGAAGATTAAACACCATGGGATGTAACTTTGTAGCTCCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661278.1 |
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| CDS CAA 72 bp | CAAAGTTACATCCCATGGTGTTTAATCTTCATAGCTTaGTCAGGTCCTGTAATTCCTGTAATTCTCAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: QSYIPWCLIFIA*SGPVIPVILRG Trigger: TCCTCTGAGAATTACAGGAATTACAGGACCTGACAAAGCTATGAAGATTAAACACCATGGGATGTAACTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661278.1 |
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| CDS CAA 72 bp | CACGTCAGGTATTTAGGCGTTGAAGTACTCCATTCATaGCTCTTTTATCTAGCAAGTAACATGCTGACTTAT | + |
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Preference number: 6 (lower is better) Translates to: HVRYLGVEVLHS*LFYLASNMLTY Trigger: ATAAGTCAGCATGTTACTTGCTAGATAAAAGAGCAATGAATGGAGTACTTCAACGCCTAAATACCTGACGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661129.1 ENST00000669076.1 |
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| CDS TCA 72 bp | ATTCAAATGTTGCAAACATTTAATTTATTCCTGCCCTaGCCCGTCTTTCAAATAGCAGACTCAAAACAGGTG | + |
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Preference number: 6 (lower is better) Translates to: IQMLQTFNLFLP*PVFQIADSKQV Trigger: CACCTGTTTTGAGTCTGCTATTTGAAAGACGGGTCAGGGCAGGAATAAATTAAATGTTTGCAACATTTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657547.1 |
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| CDS GCA 72 bp | TGTAATTCCTGTAATTCTCAGAGGAAGTTTAAGTTTTaGTTAGCCATGCAAGAAACCTCCTTGCTAAAACTG | + |
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Preference number: 6 (lower is better) Translates to: CNSCNSQRKFKF*LAMQETSLLKL Trigger: CAGTTTTAGCAAGGAGGTTTCTTGCATGGCTAAGCAAAACTTAAACTTCCTCTGAGAATTACAGGAATTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000432535.1 ENST00000653466.1 ENST00000654311.1 ENST00000657547.1 ENST00000657805.1 ENST00000660129.1 ENST00000660389.1 ENST00000661129.1 ENST00000661278.1 ENST00000661888.1 ENST00000666624.1 ENST00000667734.1 ENST00000669076.1 |
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| CDS TCA 72 bp | GCTTTTACGTGTGTTCTCACAGATGTTTCACATCTTTaGCTTTTGCCTTTACTGATGGCTTTAACTTTATTA | + |
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Preference number: 6 (lower is better) Translates to: AFTCVLTDVSHL*LLPLLMALTLL Trigger: TAATAAAGTTAAAGCCATCAGTAAAGGCAAAAGTCAAAGATGTGAAACATCTGTGAGAACACACGTAAAAGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657547.1 ENST00000660129.1 |
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| CDS CCA 72 bp | GAACTAGCAGTTAACAAATATACCAAGTTACATTTTTaGGTAAAGAATAGCCTGATGGATGAATCTTCCGAA | + |
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Preference number: 6 (lower is better) Translates to: ELAVNKYTKLHF*VKNSLMDESSE Trigger: TTCGGAAGATTCATCCATCAGGCTATTCTTTACCCAAAAATGTAACTTGGTATATTTGTTAACTGCTAGTTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660129.1 |
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| CDS CAA 72 bp | AGCTTTTACGTGTGTTCTCACAGATGTTTCACATCTTaGACTTTTGCCTTTACTGATGGCTTTAACTTTATT | + |
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Preference number: 6 (lower is better) Translates to: SFYVCSHRCFTS*TFAFTDGFNFI Trigger: AATAAAGTTAAAGCCATCAGTAAAGGCAAAAGTCAAAGATGTGAAACATCTGTGAGAACACACGTAAAAGCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657547.1 ENST00000660129.1 |
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