Pregenerated sensors for LINC00841 (Homo sapiens)
Ensembl gene IDs: ENSG00000233395Ensembl transcript IDs: ENST00000451929.1, ENST00000654894.1, ENST00000657555.1, ENST00000658736.1, ENST00000660538.1, ENST00000664261.1, ENST00000667054.1, ENST00000667785.1, ENST00000670971.1
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGGGCTCAAGCTCAGGCCCTTCCCTGCTGTGTGCCATAAATCAGTaGCCGAAGGGACAGGAAGCAGAGGAGCCCATGAGGGTGGCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: QGSSSGPSLLCAINQ*PKGQEAEEPMRVAV Trigger: GACGGCCACCCTCATGGGCTCCTCTGCTTCCTGTCCCTTCGGGCACTGATTTATGGCACACAGCAGGGAAGGGCCTGAGCTTGAGCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS CCA 90 bp | GCTGGAGGTCACAATGCCTCCACTCGTGTCTGGACCCCCTTCAGCTaGGTGGCTACAGCAGGCAGGAACTGGCCTCCATCTCCTGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGGHNASTRVWTPFS*VATAGRNWPPSPVR Trigger: CCTCACAGGAGATGGAGGCCAGTTCCTGCCTGCTGTAGCCACCCAGCTGAAGGGGGTCCAGACACGAGTGGAGGCATTGTGACCTCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CCA 90 bp | GAGGTGTCTGCTGAGGCTGGAGGTCACAATGCCTCCACTCGTGTCTaGACCCCCTTCAGCTGGGTGGCTACAGCAGGCAGGAACTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EVSAEAGGHNASTRV*TPFSWVATAGRNWP Trigger: AGGCCAGTTCCTGCCTGCTGTAGCCACCCAGCTGAAGGGGGTCCAGACACGAGTGGAGGCATTGTGACCTCCAGCCTCAGCAGACACCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS GCA 90 bp | AAAGTCTGCAAATGGGGCTCACTCGGTGGCGTGGTTGCTCTGCCCTaGGCAGTGTGGAGGTGTCTGCTGAGGCTGGAGGTCACAATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KVCKWGSLGGVVALP*AVWRCLLRLEVTMP Trigger: AGGCATTGTGACCTCCAGCCTCAGCAGACACCTCCACACTGCGCAGGGCAGAGCAACCACGCCACCGAGTGAGCCCCATTTGCAGACTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CCA 90 bp | CCTCCTACTACTGAGTGGCGAGGCTTCAGAAATGACATGCGGAGGTaGAGATGGGGGTGCACAGCGGGGCTCTGCCCAGCCTCACTTATG | + |
|
Preference number: 5 (lower is better) Translates to: PPTTEWRGFRNDMRR*RWGCTAGLCPASLM Trigger: CATAAGTGAGGCTGGGCAGAGCCCCGCTGTGCACCCCCATCTCCACCTCCGCATGTCATTTCTGAAGCCTCGCCACTCAGTAGTAGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS GCA 90 bp | ACAGGAAGCAGAGGAGCCCATGAGGGTGGCCGTCTCCAGAACAGATaGTCCCCATTCAGCCACACTTGGCCTGGATGTGCATACCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TGSRGAHEGGRLQNR*SPFSHTWPGCAYQV Trigger: CACCTGGTATGCACATCCAGGCCAAGTGTGGCTGAATGGGGAGCATCTGTTCTGGAGACGGCCACCCTCATGGGCTCCTCTGCTTCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS CCA 90 bp | GCGTCACCCAAGGCCTGGACGTCTTCCTGGACTGTGAGTTGCTTTTaGGCCCAGGACTCTTCGAATGCGTCTCATGACAGAGAGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ASPKAWTSSWTVSCF*AQDSSNASHDREAG Trigger: GCCTGCCTCTCTGTCATGAGACGCATTCGAAGAGTCCTGGGCCCAAAAGCAACTCACAGTCCAGGAAGACGTCCAGGCCTTGGGTGACGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000451929.1 ENST00000660538.1 ENST00000664261.1 ENST00000667054.1 |
||
| CDS GCA 90 bp | TTTCTCTTGAATGCATGTCAGTGGCCTCCCTGGGCTCGCCGTCTATaGCACCCTGCAGGGGCACATGTGCGTTGCAGGCTCTCAGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FLLNACQWPPWARRL*HPAGAHVRCRLSVN Trigger: ATTGACTGAGAGCCTGCAACGCACATGTGCCCCTGCAGGGTGGCATAGACGGCGAGCCCAGGGAGGCCACTGACATGCATTCAAGAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658736.1 |
||
| CDS CCA 90 bp | CGTGTCTGGACCCCCTTCAGCTGGGTGGCTACAGCAGGCAGGAACTaGCCTCCATCTCCTGTGAGGTGTTCAGACTTCCTACACAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RVWTPFSWVATAGRN*PPSPVRCSDFLHSN Trigger: ATTGCTGTGTAGGAAGTCTGAACACCTCACAGGAGATGGAGGCCAGTTCCTGCCTGCTGTAGCCACCCAGCTGAAGGGGGTCCAGACACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CCA 90 bp | AGGGTCCTGTCTCCGAGAATGCCACCAACTGTCCTCTCAGGGACTTaGCCAATTTCCTGGGAGTCATGGGTTCCCTGCATCCCATCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RVLSPRMPPTVLSGT*PISWESWVPCIPSG Trigger: ACCAGATGGGATGCAGGGAACCCATGACTCCCAGGAAATTGGCCAAGTCCCTGAGAGGACAGTTGGTGGCATTCTCGGAGACAGGACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS TCA 90 bp | TCAGCTGGGTGGCTACAGCAGGCAGGAACTGGCCTCCATCTCCTGTaGGGTGTTCAGACTTCCTACACAGCAATTGCTTCCAAGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SAGWLQQAGTGLHLL*GVQTSYTAIASKRA Trigger: TGCCCTCTTGGAAGCAATTGCTGTGTAGGAAGTCTGAACACCTCACAGGAGATGGAGGCCAGTTCCTGCCTGCTGTAGCCACCCAGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS GCA 90 bp | GTTCCTTCAACCCAGGGAGGGTTGCGGCTCCCTCCAATGTCACTGTaGTCTGGCCTCAAAGTCTTCCCAAATCTTGTCCACCTCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VPSTQGGLRLPPMSL*SGLKVFPNLVHLWV Trigger: AACCCAGAGGTGGACAAGATTTGGGAAGACTTTGAGGCCAGAGCACAGTGACATTGGAGGGAGCCGCAACCCTCCCTGGGTTGAAGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654894.1 |
||
| CDS GCA 90 bp | GGGGGCCATTCCCACTGCATATCTAACACTATGGATCCGCTCCAATaGCCAGGAAGCTGGGGTGAAGAGGACAGGCTTTGGCATGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: GGHSHCISNTMDPLQ*PGSWGEEDRLWHAT Trigger: TGTTGCATGCCAAAGCCTGTCCTCTTCACCCCAGCTTCCTGGGCATTGGAGCGGATCCATAGTGTTAGATATGCAGTGGGAATGGCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS GCA 90 bp | CTGCCATCAGGTCAGGAAGTGGCTTGGAATGGGGGCCATTCCCACTaGATATCTAACACTATGGATCCGCTCCAATGCCCAGGAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPSGQEVAWNGGHSH*ISNTMDPLQCPGSW Trigger: CCAGCTTCCTGGGCATTGGAGCGGATCCATAGTGTTAGATATGCAGTGGGAATGGCCCCCATTCCAAGCCACTTCCTGACCTGATGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS CCA 90 bp | AAGTGGCTTGGAATGGGGGCCATTCCCACTGCATATCTAACACTATaGATCCGCTCCAATGCCCAGGAAGCTGGGGTGAAGAGGACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KWLGMGAIPTAYLTL*IRSNAQEAGVKRTG Trigger: GCCTGTCCTCTTCACCCCAGCTTCCTGGGCATTGGAGCGGATCCATAGTGTTAGATATGCAGTGGGAATGGCCCCCATTCCAAGCCACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS TCA 90 bp | CTCTGGGCAAGCCCCTTGCAGTCTTCTCTCCCTCGCTCACACTCATaGCAGTATGTAACCTCCATCTGCCACCCTTCGCAATCTCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: LWASPLQSSLPRSHS*QYVTSICHPSQSHH Trigger: GTGATGAGATTGCGAAGGGTGGCAGATGGAGGTTACATACTGTCATGAGTGTGAGCGAGGGAGAGAAGACTGCAAGGGGCTTGCCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS TCA 90 bp | CTGGAACCCAGCCCTGAGGATGAGGCCTCATTTGCACTTGCTGTGTaGCCTTCGGAAAGTGACTGTGGCTCTCTGGTGTTCAGTTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LEPSPEDEASFALAV*PSESDCGSLVFSSL Trigger: AAGGGAACTGAACACCAGAGAGCCACAGTCACTTTCCGAAGGTCACACAGCAAGTGCAAATGAGGCCTCATCCTCAGGGCTGGGTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CCA 90 bp | ACACTGGAGGGATGCAGCAGCAGAAAGGGGCTCTCTTGCTGGTACTaGCCTATTCCTCCTACTACTGAGTGGCGAGGCTTCAGAAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: TLEGCSSRKGLSCWY*PIPPTTEWRGFRND Trigger: GTCATTTCTGAAGCCTCGCCACTCAGTAGTAGGAGGAATAGGCCAGTACCAGCAAGAGAGCCCCTTTCTGCTGCTGCATCCCTCCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CCA 90 bp | TCTCATCTGCAACTGCCACCAGGTTCAACTGTCAATAGAGGACACTaGAGGGATGCAGCAGCAGAAAGGGGCTCTCTTGCTGGTACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SHLQLPPGSTVNRGH*RDAAAERGSLAGTG Trigger: GCCAGTACCAGCAAGAGAGCCCCTTTCTGCTGCTGCATCCCTCCAGTGTCCTCTATTGACAGTTGAACCTGGTGGCAGTTGCAGATGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CCA 90 bp | AAACTTTACCAGCCACAAGTCAGCGCAGGCCTCAGCACAGGCCTCTaGGTCACTGACGCTAAGGGCCTCTTTGCAGTCTTTGTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KLYQPQVSAGLSTGL*VTDAKGLFAVFVFC Trigger: ACAGAAGACAAAGACTGCAAAGAGGCCCTTAGCGTCAGTGACCCAGAGGCCTGTGCTGAGGCCTGCGCTGACTTGTGGCTGGTAAAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CCA 90 bp | CATGTGAGGACTAGCAGGGTGCTGCCATCAGGTCAGGAAGTGGCTTaGAATGGGGGCCATTCCCACTGCATATCTAACACTATGGATCCG | + |
|
Preference number: 5 (lower is better) Translates to: HVRTSRVLPSGQEVA*NGGHSHCISNTMDP Trigger: CGGATCCATAGTGTTAGATATGCAGTGGGAATGGCCCCCATTCCAAGCCACTTCCTGACCTGATGGCAGCACCCTGCTAGTCCTCACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS CCA 90 bp | TTCAACCCAGGGAGGGTTGCGGCTCCCTCCAATGTCACTGTGCTCTaGCCTCAAAGTCTTCCTATAACCTGGGCAATGAGAGTCCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FNPGRVAAPSNVTVL*PQSLPITWAMRVLC Trigger: ACAGAGGACTCTCATTGCCCAGGTTATAGGAAGACTTTGAGGCCAGAGCACAGTGACATTGGAGGGAGCCGCAACCCTCCCTGGGTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660538.1 |
||
| CDS GCA 90 bp | TGGCCTCCATCTCCTGTGAGGTGTTCAGACTTCCTACACAGCAATTaGTTCCAAGAGGGCAAGGGGGCCTCACTGGAAACAGGCAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: WPPSPVRCSDFLHSN*FQEGKGASLETGNS Trigger: AGAATTGCCTGTTTCCAGTGAGGCCCCCTTGCCCTCTTGGAAGCAATTGCTGTGTAGGAAGTCTGAACACCTCACAGGAGATGGAGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CCA 90 bp | ACTTCCTACACAGCAATTGCTTCCAAGAGGGCAAGGGGGCCTCACTaGAAACAGGCAATTCTGCTTCCGGCCAATTCTGCCACATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSYTAIASKRARGPH*KQAILLPANSATFS Trigger: GGAGAATGTGGCAGAATTGGCCGGAAGCAGAATTGCCTGTTTCCAGTGAGGCCCCCTTGCCCTCTTGGAAGCAATTGCTGTGTAGGAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS TCA 90 bp | AGGAGCTGGGAGCATCAGGAGGCTGCTTCCAGATGTGTGGCACTCTaGAAAGCTGGGAGTGGGGACTATGCATTTCATGTGCAAGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RSWEHQEAASRCVAL*KAGSGDYAFHVQVE Trigger: TTCTACTTGCACATGAAATGCATAGTCCCCACTCCCAGCTTTTCAGAGTGCCACACATCTGGAAGCAGCCTCCTGATGCTCCCAGCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS GCA 90 bp | CTGCTTTGCTCTAGAGTTTTTCCTCAAGGGTCCTGTCTCCGAGAATaGCACCAACTGTCCTCTCAGGGACTTGGCCAATTTCCTGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLCSRVFPQGSCLRE*HQLSSQGLGQFPGS Trigger: ACTCCCAGGAAATTGGCCAAGTCCCTGAGAGGACAGTTGGTGGCATTCTCGGAGACAGGACCCTTGAGGAAAAACTCTAGAGCAAAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CCA 90 bp | CTGGTGTTCAGTTCCCTTTATGTGATTAGACACGTGTTAGTTGGCTaGTTCATGGTGCTCCTCCTTCACAGGCTGAAGGGGACGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LVFSSLYVIRHVLVG*FMVLLLHRLKGTQD Trigger: GTCCTGCGTCCCCTTCAGCCTGTGAAGGAGGAGCACCATGAACCAGCCAACTAACACGTGTCTAATCACATAAAGGGAACTGAACACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CCA 90 bp | TGGCCGTCTCCAGAACAGATGCTCCCCATTCAGCCACACTTGGCCTaGATGTGCATACCAGGTGTGAGGCTATTGATTCAAATCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WPSPEQMLPIQPHLA*MCIPGVRLLIQIWV Trigger: AACCCAGATTTGAATCAATAGCCTCACACCTGGTATGCACATCCAGGCCAAGTGTGGCTGAATGGGGAGCATCTGTTCTGGAGACGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS TCA 90 bp | TCCACAGTTACTCTCATCCTTTCTCCTCTCATTCACAGGCAAATGTaGCCACAGATTGTCACCAGCTGTTTCCTCTCCTGCCCCCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: STVTLILSPLIHRQM*PQIVTSCFLSCPHS Trigger: GGAATGGGGGCAGGAGAGGAAACAGCTGGTGACAATCTGTGGTCACATTTGCCTGTGAATGAGAGGAGAAAGGATGAGAGTAACTGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS TCA 90 bp | ATTTCCTGGGAGTCATGGGTTCCCTGCATCCCATCTGGTAGCAGTTaGATGCCTCTCAGCTCTAAACTCATCTCTCATTTCTTGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ISWESWVPCIPSGSS*MPLSSKLISHFLLS Trigger: GCTGAGCAAGAAATGAGAGATGAGTTTAGAGCTGAGAGGCATTCAACTGCTACCAGATGGGATGCAGGGAACCCATGACTCCCAGGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS GCA 90 bp | CCTGGGAGTCATGGGTTCCCTGCATCCCATCTGGTAGCAGTTGAATaGCTCTCAGCTCTAAACTCATCTCTCATTTCTTGCTCAGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PGSHGFPASHLVAVE*LSALNSSLISCSAK Trigger: TTTTGCTGAGCAAGAAATGAGAGATGAGTTTAGAGCTGAGAGGCATTCAACTGCTACCAGATGGGATGCAGGGAACCCATGACTCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS GCA 90 bp | TCTCCAGAACAGATGCTCCCCATTCAGCCACACTTGGCCTGGATGTaGATACCAGGTGTGAGGCTATTGATTCAAATCTGGGTTAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SPEQMLPIQPHLAWM*IPGVRLLIQIWVKE Trigger: TTCCTTAACCCAGATTTGAATCAATAGCCTCACACCTGGTATGCACATCCAGGCCAAGTGTGGCTGAATGGGGAGCATCTGTTCTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS TCA 90 bp | AGCTGGGAGTGGGGACTATGCATTTCATGTGCAAGTAGAAGCTGGTaGCTGATGCCTTTTGCAAGTGATTTCAGTTTGAAACCTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SWEWGLCISCASRSW*LMPFASDFSLKPGL Trigger: GAGCCCAGGTTTCAAACTGAAATCACTTGCAAAAGGCATCAGTCACCAGCTTCTACTTGCACATGAAATGCATAGTCCCCACTCCCAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS GCA 90 bp | CTCATCACCATCAATATGCTCCTTCTCCCAGTAAAAGTAAAACCCTaGCTCAGCCTCACACCTCTCCACAGTTACTCTCATCCTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LITINMLLLPVKVKP*LSLTPLHSYSHPFS Trigger: GGAGAAAGGATGAGAGTAACTGTGGAGAGGTGTGAGGCTGAGGCAGGGTTTTACTTTTACTGGGAGAAGGAGCATATTGATGGTGATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS GCA 90 bp | GGCATCACAGCAGTTCTGTCACCAACAAGCATGGGATCCAACCAGTaGTTGGTGTACGAGAGAAACTCAATAAATGATCCAACGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: GITAVLSPTSMGSNQ*LVYERNSINDPTCT Trigger: TGTGCACGTTGGATCATTTATTGAGTTTCTCTCGTACACCAAGCACTGGTTGGATCCCATGCTTGTTGGTGACAGAACTGCTGTGATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS GCA 90 bp | GACCCTTCCAGGGCAAGCCATTCTCACTCCACCATGAAGCACTTATaGCTGAAATCCAAATGGAGAGTAAGAGTCAGTGAAAGTCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: DPSRASHSHSTMKHL*LKSKWRVRVSESHS Trigger: AGAGTGACTTTCACTGACTCTTACTCTCCATTTGGATTTCAGGCATAAGTGCTTCATGGTGGAGTGAGAATGGCTTGCCCTGGAAGGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657555.1 ENST00000670971.1 |
||
| CDS GCA 90 bp | AAGGGCCTCTTTGCAGTCTTTGTCTTCTGTGACACTATGGGCCATTaGATCTTCACTAGAACTTGCCCATCTCCTCTAATCTCACACTCT | + |
|
Preference number: 5 (lower is better) Translates to: KGLFAVFVFCDTMGH*IFTRTCPSPLISHS Trigger: AGAGTGTGAGATTAGAGGAGATGGGCAAGTTCTAGTGAAGATGCAATGGCCCATAGTGTCACAGAAGACAAAGACTGCAAAGAGGCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS GCA 90 bp | TACGAGAGAAACTCAATAAATGATCCAACGTGCACAATCATTATTTaGTCAAAGTCTGCAAATGGGGCTCACTCGGTGGCGTGGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: YERNSINDPTCTIII*SKSANGAHSVAWLL Trigger: GAGCAACCACGCCACCGAGTGAGCCCCATTTGCAGACTTTGAGCAAATAATGATTGTGCACGTTGGATCATTTATTGAGTTTCTCTCGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS TCA 90 bp | CAGAACAGTTTAGACTTCACAATGAAGATCACTCCTTCTAAAACATaGCCCTTCCAGGGCAAGCCATTCTCACTCCACCATGAAGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: QNSLDFTMKITPSKT*PFQGKPFSLHHEAL Trigger: AAGTGCTTCATGGTGGAGTGAGAATGGCTTGCCCTGGAAGGGTCATGTTTTAGAAGGAGTGATCTTCATTGTGAAGTCTAAACTGTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000654894.1 ENST00000657555.1 ENST00000658736.1 ENST00000660538.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS TCA 90 bp | ATGGAAATTACTCCAGAGATACTAGATTTTGGTTCCACCATTGGCTaGGGCTCAACAATTGCCAGCTGGATGATGAACCAATGCTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: MEITPEILDFGSTIG*GSTIASWMMNQCLG Trigger: TCCCAAGCATTGGTTCATCATCCAGCTGGCAATTGTTGAGCCTCAGCCAATGGTGGAACCAAAATCTAGTATCTCTGGAGTAATTTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657555.1 ENST00000670971.1 |
||
| CDS CCA 90 bp | GAAAGAAGACCTTCATCTCTACCTTCAGAATGTTCTTCACTGCACTaGAATGAAGATGGTGATGATAACGATGGTCAGGGCTCAAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ERRPSSLPSECSSLH*NEDGDDNDGQGSSS Trigger: TGAGCTTGAGCCCTGACCATCGTTATCATCACCATCTTCATTCCAGTGCAGTGAAGAACATTCTGAAGGTAGAGATGAAGGTCTTCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS CCA 90 bp | GGAAATGGAAATTACTCCAGAGATACTAGATTTTGGTTCCACCATTaGCTGAGGCTCAACAATTGCCAGCTGGATGATGAACCAATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GNGNYSRDTRFWFHH*LRLNNCQLDDEPML Trigger: AAGCATTGGTTCATCATCCAGCTGGCAATTGTTGAGCCTCAGCCAATGGTGGAACCAAAATCTAGTATCTCTGGAGTAATTTCCATTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657555.1 ENST00000670971.1 |
||
| CDS CCA 90 bp | TCTCCTTCTGTTGGAAATGGAAATTACTCCAGAGATACTAGATTTTaGTTCCACCATTGGCTGAGGCTCAACAATTGCCAGCTGGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: SPSVGNGNYSRDTRF*FHHWLRLNNCQLDD Trigger: ATCATCCAGCTGGCAATTGTTGAGCCTCAGCCAATGGTGGAACCAAAATCTAGTATCTCTGGAGTAATTTCCATTTCCAACAGAAGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657555.1 ENST00000670971.1 |
||
| CDS CCA 90 bp | AGCCATTCTCACTCCACCATGAAGCACTTATGCCTGAAATCCAAATaGAGAGTAAGAGTCAGTGAAAGTCACTCTCCTTCTGTTGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SHSHSTMKHLCLKSK*RVRVSESHSPSVGN Trigger: ATTTCCAACAGAAGGAGAGTGACTTTCACTGACTCTTACTCTCCATTTGGATTTCAGGCATAAGTGCTTCATGGTGGAGTGAGAATGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657555.1 ENST00000670971.1 |
||
| CDS TCA 90 bp | GCACACACACACATGCACACCACACACACACCATGCACTACCATGTaGCCTTGCTTAAAAAGAGAACTATCTGTTATCATCCTTACTAAA | + |
|
Preference number: 5 (lower is better) Translates to: AHTHMHTTHTPCTTM*PCLKRELSVIILTK Trigger: TTTAGTAAGGATGATAACAGATAGTTCTCTTTTTAAGCAAGGTCACATGGTAGTGCATGGTGTGTGTGTGGTGTGCATGTGTGTGTGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS TCA 90 bp | CATGGGATCCAACCAGTGCTTGGTGTACGAGAGAAACTCAATAAATaGTCCAACGTGCACAATCATTATTTGCTCAAAGTCTGCAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: HGIQPVLGVREKLNK*SNVHNHYLLKVCKW Trigger: CCATTTGCAGACTTTGAGCAAATAATGATTGTGCACGTTGGATCATTTATTGAGTTTCTCTCGTACACCAAGCACTGGTTGGATCCCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS GCA 90 bp | ATTCAGAAAGAAGACCTTCATCTCTACCTTCAGAATGTTCTTCACTaGACTGGAATGAAGATGGTGATGATAACGATGGTCAGGGCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: IQKEDLHLYLQNVLH*TGMKMVMITMVRAQ Trigger: TTGAGCCCTGACCATCGTTATCATCACCATCTTCATTCCAGTGCAGTGAAGAACATTCTGAAGGTAGAGATGAAGGTCTTCTTTCTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS GCA 90 bp | TCCATGTATTTCCAGGAGAGATCACCACAAGTAAGTCAGAGTGCATaGATTAAAGTCAAAATGATTGGTGCCTTCAAGAGGAAGATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SMYFQERSPQVSQSA*IKVKMIGAFKRKIP Trigger: AGGGATCTTCCTCTTGAAGGCACCAATCATTTTGACTTTAATGCATGCACTCTGACTTACTTGTGGTGATCTCTCCTGGAAATACATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS CCA 90 bp | TTCTCTCTGAAAGTGGAGTTAGCAGTGTCTTCGTCTGAGACTTCCTaGGTTTCAAAGCTTATATTTCCAGAACAGTTTAGACTTCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: FSLKVELAVSSSETS*VSKLIFPEQFRLHN Trigger: ATTGTGAAGTCTAAACTGTTCTGGAAATATAAGCTTTGAAACCCAGGAAGTCTCAGACGAAGACACTGCTAACTCCACTTTCAGAGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670971.1 |
||
| CDS GCA 72 bp | AAATGGGGCTCACTCGGTGGCGTGGTTGCTCTGCCCTaGGCAGTGTGGAGGTGTCTGCTGAGGCTGGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: KWGSLGGVVALP*AVWRCLLRLEV Trigger: GACCTCCAGCCTCAGCAGACACCTCCACACTGCGCAGGGCAGAGCAACCACGCCACCGAGTGAGCCCCATTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS GCA 72 bp | TCAGTGGCCTCCCTGGGCTCGCCGTCTATGCCACCCTaGAGGGGCACATGTGCGTTGCAGGCTCTCAGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: SVASLGSPSMPP*RGTCALQALSQ Trigger: TTGACTGAGAGCCTGCAACGCACATGTGCCCCTGCAGGGTGGCATAGACGGCGAGCCCAGGGAGGCCACTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658736.1 |
||
| CDS GCA 72 bp | AATGCATGTCAGTGGCCTCCCTGGGCTCGCCGTCTATaGCACCCTGCAGGGGCACATGTGCGTTGCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: NACQWPPWARRL*HPAGAHVRCRL Trigger: GAGCCTGCAACGCACATGTGCCCCTGCAGGGTGGCATAGACGGCGAGCCCAGGGAGGCCACTGACATGCATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658736.1 |
||
| CDS CCA 72 bp | ACTGAGTGGCGAGGCTTCAGAAATGACATGCGGAGGTaGAGATGGGGGTGCACAGCGGGGCTCTGCCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TEWRGFRNDMRR*RWGCTAGLCPA Trigger: GGCTGGGCAGAGCCCCGCTGTGCACCCCCATCTCCACCTCCGCATGTCATTTCTGAAGCCTCGCCACTCAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CCA 72 bp | GCTGAGGCTGGAGGTCACAATGCCTCCACTCGTGTCTaGACCCCCTTCAGCTGGGTGGCTACAGCAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AEAGGHNASTRV*TPFSWVATAGR Trigger: CCTGCCTGCTGTAGCCACCCAGCTGAAGGGGGTCCAGACACGAGTGGAGGCATTGTGACCTCCAGCCTCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CCA 72 bp | TGGCGAGGCTTCAGAAATGACATGCGGAGGTGGAGATaGGGGTGCACAGCGGGGCTCTGCCCAGCCTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: WRGFRNDMRRWR*GCTAGLCPASL Trigger: AAGTGAGGCTGGGCAGAGCCCCGCTGTGCACCCCCATCTCCACCTCCGCATGTCATTTCTGAAGCCTCGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CCA 72 bp | ATGCCTCCACTCGTGTCTGGACCCCCTTCAGCTGGGTaGCTACAGCAGGCAGGAACTGGCCTCCATCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: MPPLVSGPPSAG*LQQAGTGLHLL Trigger: CAGGAGATGGAGGCCAGTTCCTGCCTGCTGTAGCCACCCAGCTGAAGGGGGTCCAGACACGAGTGGAGGCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CCA 72 bp | TCACTCGGTGGCGTGGTTGCTCTGCCCTGCGCAGTGTaGAGGTGTCTGCTGAGGCTGGAGGTCACAATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLGGVVALPCAV*RCLLRLEVTMP Trigger: AGGCATTGTGACCTCCAGCCTCAGCAGACACCTCCACACTGCGCAGGGCAGAGCAACCACGCCACCGAGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CCA 72 bp | CACAATGCCTCCACTCGTGTCTGGACCCCCTTCAGCTaGGTGGCTACAGCAGGCAGGAACTGGCCTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: HNASTRVWTPFS*VATAGRNWPPS Trigger: AGATGGAGGCCAGTTCCTGCCTGCTGTAGCCACCCAGCTGAAGGGGGTCCAGACACGAGTGGAGGCATTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CCA 72 bp | TGCTCAAAGTCTGCAAATGGGGCTCACTCGGTGGCGTaGTTGCTCTGCCCTGCGCAGTGTGGAGGTGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CSKSANGAHSVA*LLCPAQCGGVC Trigger: GCAGACACCTCCACACTGCGCAGGGCAGAGCAACCACGCCACCGAGTGAGCCCCATTTGCAGACTTTGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS GCA 72 bp | TGGTCAGGGCTCAAGCTCAGGCCCTTCCCTGCTGTGTaGCATAAATCAGTGCCCGAAGGGACAGGAAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: WSGLKLRPFPAV*HKSVPEGTGSR Trigger: TCTGCTTCCTGTCCCTTCGGGCACTGATTTATGGCACACAGCAGGGAAGGGCCTGAGCTTGAGCCCTGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS CCA 72 bp | ACCCCCTTCAGCTGGGTGGCTACAGCAGGCAGGAACTaGCCTCCATCTCCTGTGAGGTGTTCAGACTTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: TPFSWVATAGRN*PPSPVRCSDFL Trigger: TAGGAAGTCTGAACACCTCACAGGAGATGGAGGCCAGTTCCTGCCTGCTGTAGCCACCCAGCTGAAGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CCA 72 bp | GTGCTCCTCCTTCACAGGCTGAAGGGGACGCAGGACTaGCATCACAGCAGTTCTGTCACCAACAAGCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: VLLLHRLKGTQD*HHSSSVTNKHG Trigger: CCCATGCTTGTTGGTGACAGAACTGCTGTGATGCCAGTCCTGCGTCCCCTTCAGCCTGTGAAGGAGGAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CAA 72 bp | GCCACATTCTCCTTAGTTCCTTCAACCCAGGGAGGGTaGCGGCTCCCTCCAATGTCACTGTGCTCTGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ATFSLVPSTQGG*RLPPMSLCSGL Trigger: GAGGCCAGAGCACAGTGACATTGGAGGGAGCCGCAACCCTCCCTGGGTTGAAGGAACTAAGGAGAATGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CAA 90 bp | AAGGGTCCTGTCTCCGAGAATGCCACCAACTGTCCTCTCAGGGACTaGGCCAATTTCCTGGGAGTCATGGGTTCCCTGCATCCCATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KGPVSENATNCPLRD*ANFLGVMGSLHPIW Trigger: CCAGATGGGATGCAGGGAACCCATGACTCCCAGGAAATTGGCCAAGTCCCTGAGAGGACAGTTGGTGGCATTCTCGGAGACAGGACCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CCA 72 bp | GGATGCAGCAGCAGAAAGGGGCTCTCTTGCTGGTACTaGCCTATTCCTCCTACTACTGAGTGGCGAGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GCSSRKGLSCWY*PIPPTTEWRGF Trigger: GAAGCCTCGCCACTCAGTAGTAGGAGGAATAGGCCAGTACCAGCAAGAGAGCCCCTTTCTGCTGCTGCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CCA 72 bp | CCACCAACTGTCCTCTCAGGGACTTGGCCAATTTCCTaGGAGTCATGGGTTCCCTGCATCCCATCTGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: PPTVLSGTWPIS*ESWVPCIPSGS Trigger: GCTACCAGATGGGATGCAGGGAACCCATGACTCCCAGGAAATTGGCCAAGTCCCTGAGAGGACAGTTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CCA 72 bp | GGAGCTGGGAGCATCAGGAGGCTGCTTCCAGATGTGTaGCACTCTGAAAAGCTGGGAGTGGGGACTATGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GAGSIRRLLPDV*HSEKLGVGTMH Trigger: ATGCATAGTCCCCACTCCCAGCTTTTCAGAGTGCCACACATCTGGAAGCAGCCTCCTGATGCTCCCAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CAA 72 bp | GTCACCCAAGGCCTGGACGTCTTCCTGGACTGTGAGTaGCTTTTGGGCCCAGGACTCTTCGAATGCGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VTQGLDVFLDCE*LLGPGLFECVS Trigger: TGAGACGCATTCGAAGAGTCCTGGGCCCAAAAGCAACTCACAGTCCAGGAAGACGTCCAGGCCTTGGGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000451929.1 ENST00000660538.1 ENST00000664261.1 ENST00000667054.1 |
||
| CDS CAA 72 bp | CAGGCCTGGAACCCAGCCCTGAGGATGAGGCCTCATTaGCACTTGCTGTGTGACCTTCGGAAAGTGACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: QAWNPALRMRPH*HLLCDLRKVTV Trigger: CACAGTCACTTTCCGAAGGTCACACAGCAAGTGCAAATGAGGCCTCATCCTCAGGGCTGGGTTCCAGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS TCA 72 bp | TCCTTGGCCCACAGTAATCTCTGCCTCCACCTCCACTaGAACTTTACCAGCCACAAGTCAGCGCAGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLAHSNLCLHLH*NFTSHKSAQAS Trigger: TGAGGCCTGCGCTGACTTGTGGCTGGTAAAGTTTCAGTGGAGGTGGAGGCAGAGATTACTGTGGGCCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS GCA 72 bp | ACACTGGAGGGATGCAGCAGCAGAAAGGGGCTCTCTTaGTGGTACTGGCCTATTCCTCCTACTACTGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TLEGCSSRKGLS*WYWPIPPTTEW Trigger: CCACTCAGTAGTAGGAGGAATAGGCCAGTACCAGCAAGAGAGCCCCTTTCTGCTGCTGCATCCCTCCAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS GCA 72 bp | TCACCCAAGGCCTGGACGTCTTCCTGGACTGTGAGTTaGTTTTGGGCCCAGGACTCTTCGAATGCGTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SPKAWTSSWTVS*FWAQDSSNASH Trigger: ATGAGACGCATTCGAAGAGTCCTGGGCCCAAAAGCAACTCACAGTCCAGGAAGACGTCCAGGCCTTGGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000451929.1 ENST00000660538.1 ENST00000664261.1 ENST00000667054.1 |
||
| CDS CCA 72 bp | TCTCCGAGAATGCCACCAACTGTCCTCTCAGGGACTTaGCCAATTTCCTGGGAGTCATGGGTTCCCTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: SPRMPPTVLSGT*PISWESWVPCI Trigger: GATGCAGGGAACCCATGACTCCCAGGAAATTGGCCAAGTCCCTGAGAGGACAGTTGGTGGCATTCTCGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CCA 72 bp | ACAGCAATTGCTTCCAAGAGGGCAAGGGGGCCTCACTaGAAACAGGCAATTCTGCTTCCGGCCAATTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TAIASKRARGPH*KQAILLPANSA Trigger: GGCAGAATTGGCCGGAAGCAGAATTGCCTGTTTCCAGTGAGGCCCCCTTGCCCTCTTGGAAGCAATTGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CCA 72 bp | GGAATGGGGGCCATTCCCACTGCATATCTAACACTATaGATCCGCTCCAATGCCCAGGAAGCTGGGGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GMGAIPTAYLTL*IRSNAQEAGVK Trigger: CTTCACCCCAGCTTCCTGGGCATTGGAGCGGATCCATAGTGTTAGATATGCAGTGGGAATGGCCCCCATTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS CCA 72 bp | GGGAGGGTTGCGGCTCCCTCCAATGTCACTGTGCTCTaGCCTCAAAGTCTTCCTATAACCTGGGCAATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GRVAAPSNVTVL*PQSLPITWAMR Trigger: TCTCATTGCCCAGGTTATAGGAAGACTTTGAGGCCAGAGCACAGTGACATTGGAGGGAGCCGCAACCCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660538.1 |
||
| CDS CAA 72 bp | GTCTCCGAGAATGCCACCAACTGTCCTCTCAGGGACTaGGCCAATTTCCTGGGAGTCATGGGTTCCCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VSENATNCPLRD*ANFLGVMGSLH Trigger: ATGCAGGGAACCCATGACTCCCAGGAAATTGGCCAAGTCCCTGAGAGGACAGTTGGTGGCATTCTCGGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CAA 72 bp | CCGTCTCCAGAACAGATGCTCCCCATTCAGCCACACTaGGCCTGGATGTGCATACCAGGTGTGAGGCTATTG | + |
|
Preference number: 6 (lower is better) Translates to: PSPEQMLPIQPH*AWMCIPGVRLL Trigger: CAATAGCCTCACACCTGGTATGCACATCCAGGCCAAGTGTGGCTGAATGGGGAGCATCTGTTCTGGAGACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS CAA 90 bp | CAGGCCTCAGCACAGGCCTCTGGGTCACTGACGCTAAGGGCCTCTTaGCAGTCTTTGTCTTCTGTGACACTATGGGCCATTGCATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QASAQASGSLTLRAS*QSLSSVTLWAIASS Trigger: TGAAGATGCAATGGCCCATAGTGTCACAGAAGACAAAGACTGCAAAGAGGCCCTTAGCGTCAGTGACCCAGAGGCCTGTGCTGAGGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CAA 90 bp | CTGGCCTCCATCTCCTGTGAGGTGTTCAGACTTCCTACACAGCAATaGCTTCCAAGAGGGCAAGGGGGCCTCACTGGAAACAGGCAATTC | + |
|
Preference number: 6 (lower is better) Translates to: LASISCEVFRLPTQQ*LPRGQGGLTGNRQF Trigger: GAATTGCCTGTTTCCAGTGAGGCCCCCTTGCCCTCTTGGAAGCAATTGCTGTGTAGGAAGTCTGAACACCTCACAGGAGATGGAGGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS TCA 72 bp | TGGCTACAGCAGGCAGGAACTGGCCTCCATCTCCTGTaGGGTGTTCAGACTTCCTACACAGCAATTGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: WLQQAGTGLHLL*GVQTSYTAIAS Trigger: GGAAGCAATTGCTGTGTAGGAAGTCTGAACACCTCACAGGAGATGGAGGCCAGTTCCTGCCTGCTGTAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS TCA 72 bp | AGCCCTGAGGATGAGGCCTCATTTGCACTTGCTGTGTaGCCTTCGGAAAGTGACTGTGGCTCTCTGGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SPEDEASFALAV*PSESDCGSLVF Trigger: GAACACCAGAGAGCCACAGTCACTTTCCGAAGGTCACACAGCAAGTGCAAATGAGGCCTCATCCTCAGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS GCA 72 bp | GGTCAGGAAGTGGCTTGGAATGGGGGCCATTCCCACTaGATATCTAACACTATGGATCCGCTCCAATGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GQEVAWNGGHSH*ISNTMDPLQCP Trigger: TGGGCATTGGAGCGGATCCATAGTGTTAGATATGCAGTGGGAATGGCCCCCATTCCAAGCCACTTCCTGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS GCA 72 bp | GGGCTCGCCGTCTATGCCACCCTGCAGGGGCACATGTaGGTTGCAGGCTCTCAGTCAATATTTTATGATAAC | + |
|
Preference number: 6 (lower is better) Translates to: GLAVYATLQGHM*VAGSQSIFYDN Trigger: GTTATCATAAAATATTGACTGAGAGCCTGCAACGCACATGTGCCCCTGCAGGGTGGCATAGACGGCGAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658736.1 |
||
| CDS CCA 72 bp | CAACTGCCACCAGGTTCAACTGTCAATAGAGGACACTaGAGGGATGCAGCAGCAGAAAGGGGCTCTCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QLPPGSTVNRGH*RDAAAERGSLA Trigger: AGCAAGAGAGCCCCTTTCTGCTGCTGCATCCCTCCAGTGTCCTCTATTGACAGTTGAACCTGGTGGCAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CCA 72 bp | AAGGCCTGGACGTCTTCCTGGACTGTGAGTTGCTTTTaGGCCCAGGACTCTTCGAATGCGTCTCATGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: KAWTSSWTVSCF*AQDSSNASHDR Trigger: TCTGTCATGAGACGCATTCGAAGAGTCCTGGGCCCAAAAGCAACTCACAGTCCAGGAAGACGTCCAGGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000451929.1 ENST00000660538.1 ENST00000664261.1 ENST00000667054.1 |
||
| CDS CCA 72 bp | ACTAGCAGGGTGCTGCCATCAGGTCAGGAAGTGGCTTaGAATGGGGGCCATTCCCACTGCATATCTAACACT | + |
|
Preference number: 6 (lower is better) Translates to: TSRVLPSGQEVA*NGGHSHCISNT Trigger: AGTGTTAGATATGCAGTGGGAATGGCCCCCATTCCAAGCCACTTCCTGACCTGATGGCAGCACCCTGCTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS CAA 72 bp | GCACAGGCCTCTGGGTCACTGACGCTAAGGGCCTCTTaGCAGTCTTTGTCTTCTGTGACACTATGGGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: AQASGSLTLRAS*QSLSSVTLWAI Trigger: AATGGCCCATAGTGTCACAGAAGACAAAGACTGCAAAGAGGCCCTTAGCGTCAGTGACCCAGAGGCCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS GCA 72 bp | TCTCCTGTGAGGTGTTCAGACTTCCTACACAGCAATTaGTTCCAAGAGGGCAAGGGGGCCTCACTGGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: SPVRCSDFLHSN*FQEGKGASLET Trigger: TGTTTCCAGTGAGGCCCCCTTGCCCTCTTGGAAGCAATTGCTGTGTAGGAAGTCTGAACACCTCACAGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CCA 72 bp | TCTTGCTGGTACTGGCCTATTCCTCCTACTACTGAGTaGCGAGGCTTCAGAAATGACATGCGGAGGTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SCWYWPIPPTTE*RGFRNDMRRWR Trigger: TCTCCACCTCCGCATGTCATTTCTGAAGCCTCGCCACTCAGTAGTAGGAGGAATAGGCCAGTACCAGCAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CCA 72 bp | AACGTGCACAATCATTATTTGCTCAAAGTCTGCAAATaGGGCTCACTCGGTGGCGTGGTTGCTCTGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: NVHNHYLLKVCK*GSLGGVVALPC Trigger: GCAGGGCAGAGCAACCACGCCACCGAGTGAGCCCCATTTGCAGACTTTGAGCAAATAATGATTGTGCACGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CAA 72 bp | ATCTCCTGTGAGGTGTTCAGACTTCCTACACAGCAATaGCTTCCAAGAGGGCAAGGGGGCCTCACTGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: ISCEVFRLPTQQ*LPRGQGGLTGN Trigger: GTTTCCAGTGAGGCCCCCTTGCCCTCTTGGAAGCAATTGCTGTGTAGGAAGTCTGAACACCTCACAGGAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CAA 90 bp | CTCTCATCCTTTCTCCTCTCATTCACAGGCAAATGTGACCACAGATaGTCACCAGCTGTTTCCTCTCCTGCCCCCATTCCTTGGCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: LSSFLLSFTGKCDHR*SPAVSSPAPIPWPT Trigger: TGTGGGCCAAGGAATGGGGGCAGGAGAGGAAACAGCTGGTGACAATCTGTGGTCACATTTGCCTGTGAATGAGAGGAGAAAGGATGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CAA 90 bp | ATTCAGCCACACTTGGCCTGGATGTGCATACCAGGTGTGAGGCTATaGATTCAAATCTGGGTTAAGGAACCCGGCTTCTCCAGGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: IQPHLAWMCIPGVRL*IQIWVKEPGFSRAP Trigger: TGGAGCCCTGGAGAAGCCGGGTTCCTTAACCCAGATTTGAATCAATAGCCTCACACCTGGTATGCACATCCAGGCCAAGTGTGGCTGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS GCA 72 bp | CAGATGCTCCCCATTCAGCCACACTTGGCCTGGATGTaGATACCAGGTGTGAGGCTATTGATTCAAATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QMLPIQPHLAWM*IPGVRLLIQIW Trigger: CCAGATTTGAATCAATAGCCTCACACCTGGTATGCACATCCAGGCCAAGTGTGGCTGAATGGGGAGCATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS CAA 72 bp | CACTTGGCCTGGATGTGCATACCAGGTGTGAGGCTATaGATTCAAATCTGGGTTAAGGAACCCGGCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HLAWMCIPGVRL*IQIWVKEPGFS Trigger: GGAGAAGCCGGGTTCCTTAACCCAGATTTGAATCAATAGCCTCACACCTGGTATGCACATCCAGGCCAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS CAA 90 bp | TCCCTCCAATGTCACTGTGCTCTGGCCTCAAAGTCTTCCCAAATCTaGTCCACCTCTGGGTTCAGCCAAGAGTTTGTGGTAACAACCACA | + |
|
Preference number: 6 (lower is better) Translates to: SLQCHCALASKSSQI*STSGFSQEFVVTTT Trigger: TGTGGTTGTTACCACAAACTCTTGGCTGAACCCAGAGGTGGACAAGATTTGGGAAGACTTTGAGGCCAGAGCACAGTGACATTGGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654894.1 |
||
| CDS CCA 72 bp | TGCTTCCAGATGTGTGGCACTCTGAAAAGCTGGGAGTaGGGACTATGCATTTCATGTGCAAGTAGAAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CFQMCGTLKSWE*GLCISCASRSW Trigger: CCAGCTTCTACTTGCACATGAAATGCATAGTCCCCACTCCCAGCTTTTCAGAGTGCCACACATCTGGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CCA 72 bp | ATGTGCATACCAGGTGTGAGGCTATTGATTCAAATCTaGGTTAAGGAACCCGGCTTCTCCAGGGCTCCATGT | + |
|
Preference number: 6 (lower is better) Translates to: MCIPGVRLLIQI*VKEPGFSRAPC Trigger: ACATGGAGCCCTGGAGAAGCCGGGTTCCTTAACCCAGATTTGAATCAATAGCCTCACACCTGGTATGCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS CAA 72 bp | TGTCACTGTGCTCTGGCCTCAAAGTCTTCCCAAATCTaGTCCACCTCTGGGTTCAGCCAAGAGTTTGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: CHCALASKSSQI*STSGFSQEFVV Trigger: TACCACAAACTCTTGGCTGAACCCAGAGGTGGACAAGATTTGGGAAGACTTTGAGGCCAGAGCACAGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654894.1 |
||
| CDS TCA 72 bp | ACTCTCATCCTTTCTCCTCTCATTCACAGGCAAATGTaGCCACAGATTGTCACCAGCTGTTTCCTCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TLILSPLIHRQM*PQIVTSCFLSC Trigger: GCAGGAGAGGAAACAGCTGGTGACAATCTGTGGTCACATTTGCCTGTGAATGAGAGGAGAAAGGATGAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CCA 72 bp | GCCCCTGAGAAACTATCTGCCCGTTTATCATTGCACTaGGCATTTCTCAGTGTCATTCAGCTCAGCATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: APEKLSARLSLH*AFLSVIQLSIF Trigger: GAAAATGCTGAGCTGAATGACACTGAGAAATGCCCAGTGCAATGATAAACGGGCAGATAGTTTCTCAGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS CAA 90 bp | ATCACAGCAGTTCTGTCACCAACAAGCATGGGATCCAACCAGTGCTaGGTGTACGAGAGAAACTCAATAAATGATCCAACGTGCACAATC | + |
|
Preference number: 6 (lower is better) Translates to: ITAVLSPTSMGSNQC*VYERNSINDPTCTI Trigger: GATTGTGCACGTTGGATCATTTATTGAGTTTCTCTCGTACACCAAGCACTGGTTGGATCCCATGCTTGTTGGTGACAGAACTGCTGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS TCA 72 bp | GGTTCTTTTACTTTAGTGTCTTCTCCTGGTGAAGAGTaGTGCTTGGCCACATCTGAGAACAAGCTAGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GSFTLVSSPGEE*CLATSENKLGK Trigger: CTTCCCTAGCTTGTTCTCAGATGTGGCCAAGCATCACTCTTCACCAGGAGAAGACACTAAAGTAAAAGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS TCA 72 bp | ACTCCAGAGATACTAGATTTTGGTTCCACCATTGGCTaGGGCTCAACAATTGCCAGCTGGATGATGAACCAA | + |
|
Preference number: 6 (lower is better) Translates to: TPEILDFGSTIG*GSTIASWMMNQ Trigger: TTGGTTCATCATCCAGCTGGCAATTGTTGAGCCTCAGCCAATGGTGGAACCAAAATCTAGTATCTCTGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657555.1 ENST00000670971.1 |
||
| CDS GCA 72 bp | ATCAATATGCTCCTTCTCCCAGTAAAAGTAAAACCCTaGCTCAGCCTCACACCTCTCCACAGTTACTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: INMLLLPVKVKP*LSLTPLHSYSH Trigger: ATGAGAGTAACTGTGGAGAGGTGTGAGGCTGAGGCAGGGTTTTACTTTTACTGGGAGAAGGAGCATATTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS GCA 72 bp | GCAGTTCTGTCACCAACAAGCATGGGATCCAACCAGTaGTTGGTGTACGAGAGAAACTCAATAAATGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: AVLSPTSMGSNQ*LVYERNSINDP Trigger: TGGATCATTTATTGAGTTTCTCTCGTACACCAAGCACTGGTTGGATCCCATGCTTGTTGGTGACAGAACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS GCA 72 bp | AGGGCAAGCCATTCTCACTCCACCATGAAGCACTTATaGCTGAAATCCAAATGGAGAGTAAGAGTCAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RASHSHSTMKHL*LKSKWRVRVSE Trigger: TTCACTGACTCTTACTCTCCATTTGGATTTCAGGCATAAGTGCTTCATGGTGGAGTGAGAATGGCTTGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657555.1 ENST00000670971.1 |
||
| CDS CAA 72 bp | GTTCTGTCACCAACAAGCATGGGATCCAACCAGTGCTaGGTGTACGAGAGAAACTCAATAAATGATCCAACG | + |
|
Preference number: 6 (lower is better) Translates to: VLSPTSMGSNQC*VYERNSINDPT Trigger: CGTTGGATCATTTATTGAGTTTCTCTCGTACACCAAGCACTGGTTGGATCCCATGCTTGTTGGTGACAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CCA 72 bp | GTCACTGTGCTCTGGCCTCAAAGTCTTCCTATAACCTaGGCAATGAGAGTCCTCTGTTATAAATACTTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VTVLWPQSLPIT*AMRVLCYKYLE Trigger: CTCTAAGTATTTATAACAGAGGACTCTCATTGCCCAGGTTATAGGAAGACTTTGAGGCCAGAGCACAGTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660538.1 |
||
| CDS TCA 72 bp | AGTCAAAATGATTGGTGCCTTCAAGAGGAAGATCCCTaGATCATGCAAGGAGCTTCATTCAGAAAGAAGACC | + |
|
Preference number: 6 (lower is better) Translates to: SQNDWCLQEEDP*IMQGASFRKKT Trigger: GGTCTTCTTTCTGAATGAAGCTCCTTGCATGATTCAGGGATCTTCCTCTTGAAGGCACCAATCATTTTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS GCA 72 bp | TTCCAGGAGAGATCACCACAAGTAAGTCAGAGTGCATaGATTAAAGTCAAAATGATTGGTGCCTTCAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FQERSPQVSQSA*IKVKMIGAFKR Trigger: CCTCTTGAAGGCACCAATCATTTTGACTTTAATGCATGCACTCTGACTTACTTGTGGTGATCTCTCCTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000657555.1 ENST00000658736.1 ENST00000667785.1 ENST00000670971.1 |
||
| CDS CCA 72 bp | AATTACTCCAGAGATACTAGATTTTGGTTCCACCATTaGCTGAGGCTCAACAATTGCCAGCTGGATGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: NYSRDTRFWFHH*LRLNNCQLDDE Trigger: TTCATCATCCAGCTGGCAATTGTTGAGCCTCAGCCAATGGTGGAACCAAAATCTAGTATCTCTGGAGTAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657555.1 ENST00000670971.1 |
||
| CDS CCA 72 bp | GTTGGAAATGGAAATTACTCCAGAGATACTAGATTTTaGTTCCACCATTGGCTGAGGCTCAACAATTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VGNGNYSRDTRF*FHHWLRLNNCQ Trigger: CTGGCAATTGTTGAGCCTCAGCCAATGGTGGAACCAAAATCTAGTATCTCTGGAGTAATTTCCATTTCCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657555.1 ENST00000670971.1 |
||
| CDS CAA 72 bp | GCACACCACACACACACCATGCACTACCATGTGACCTaGCTTAAAAAGAGAACTATCTGTTATCATCCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: AHHTHTMHYHVT*LKKRTICYHPY Trigger: GTAAGGATGATAACAGATAGTTCTCTTTTTAAGCAAGGTCACATGGTAGTGCATGGTGTGTGTGTGGTGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000451929.1 |
||
| CDS TCA 72 bp | TTTCTCTCTGAAAGTGGAGTTAGCAGTGTCTTCGTCTaGGACTTCCTGGGTTTCAAAGCTTATATTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FLSESGVSSVFV*DFLGFKAYISR Trigger: TCTGGAAATATAAGCTTTGAAACCCAGGAAGTCTCAGACGAAGACACTGCTAACTCCACTTTCAGAGAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670971.1 |
||
| CDS TCA 72 bp | CAACCAGTGCTTGGTGTACGAGAGAAACTCAATAAATaGTCCAACGTGCACAATCATTATTTGCTCAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: QPVLGVREKLNK*SNVHNHYLLKV Trigger: GACTTTGAGCAAATAATGATTGTGCACGTTGGATCATTTATTGAGTTTCTCTCGTACACCAAGCACTGGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||
| CDS CCA 72 bp | AAAGTGGAGTTAGCAGTGTCTTCGTCTGAGACTTCCTaGGTTTCAAAGCTTATATTTCCAGAACAGTTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: KVELAVSSSETS*VSKLIFPEQFR Trigger: TCTAAACTGTTCTGGAAATATAAGCTTTGAAACCCAGGAAGTCTCAGACGAAGACACTGCTAACTCCACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670971.1 |
||
| CDS CAA 90 bp | TTATTAACTGATAAGATTGACTCTGCTTCACATTCTAGCTTATTCTaGTGTTGTTCGGATCATCCACATGCTTTAACTAGTCTGGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLTDKIDSASHSSLF*CCSDHPHALTSLAE Trigger: CTCGGCCAGACTAGTTAAAGCATGTGGATGATCCGAACAACACAAGAATAAGCTAGAATGTGAAGCAGAGTCAATCTTATCAGTTAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654894.1 |
||
| CDS CCA 72 bp | ACATTAACTTCATTAAACCTTAGTCAAGCAGAACTATaGGACGTCCTTTGGTGCTTGTCTGAAACAATTTTA | + |
|
Preference number: 6 (lower is better) Translates to: TLTSLNLSQAEL*DVLWCLSETIL Trigger: TAAAATTGTTTCAGACAAGCACCAAAGGACGTCCCATAGTTCTGCTTGACTAAGGTTTAATGAAGTTAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654894.1 ENST00000660538.1 |
||