Pregenerated sensors for LINC00838 (Homo sapiens)
Ensembl gene IDs: ENSG00000261683Ensembl transcript IDs: ENST00000562956.1, ENST00000658358.1, ENST00000661641.1, ENST00000664665.1, ENST00000669458.1
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTCTTGGGGTCTGGATCAGGATCCCTTTCCGGTACCACTGTGACCTaGCTGCACACGGTCCCCCTGAAGCCACAGGTTGAGCTATGTCAG | + |
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Preference number: 5 (lower is better) Translates to: LLGSGSGSLSGTTVT*LHTVPLKPQVELCQ Trigger: CTGACATAGCTCAACCTGTGGCTTCAGGGGGACCGTGTGCAGCCAGGTCACAGTGGTACCGGAAAGGGATCCTGATCCAGACCCCAAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000562956.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS CCA 90 bp | AAGTTCAACAGACGTTTAGGGATGAGCGGCCCCGGTGGTTGTCACTaGGCACCTGAACCCCACCTGCAGCACAGTATGGCCTGGTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: KFNRRLGMSGPGGCH*APEPHLQHSMAWCS Trigger: AGAGCACCAGGCCATACTGTGCTGCAGGTGGGGTTCAGGTGCCCAGTGACAACCACCGGGGCCGCTCATCCCTAAACGTCTGTTGAACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS CCA 90 bp | GGTTGTCACTGGGCACCTGAACCCCACCTGCAGCACAGTATGGCCTaGTGCTCTGACAAGGTCTTCCACGGCATAGCTCTGAATCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GCHWAPEPHLQHSMA*CSDKVFHGIALNLQ Trigger: CTGGAGATTCAGAGCTATGCCGTGGAAGACCTTGTCAGAGCACCAGGCCATACTGTGCTGCAGGTGGGGTTCAGGTGCCCAGTGACAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS GCA 90 bp | TGTCACTGGGCACCTGAACCCCACCTGCAGCACAGTATGGCCTGGTaGTCTGACAAGGTCTTCCACGGCATAGCTCTGAATCTCCAGATC | + |
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Preference number: 5 (lower is better) Translates to: CHWAPEPHLQHSMAW*SDKVFHGIALNLQI Trigger: GATCTGGAGATTCAGAGCTATGCCGTGGAAGACCTTGTCAGAGCACCAGGCCATACTGTGCTGCAGGTGGGGTTCAGGTGCCCAGTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS TCA 90 bp | TCCGGACTCTGCAAACTCCCTCCTGCCATAGCAAACAGTTCGAGCTaGTGGTTCCCCCTGACAGTCAGAGGTGGTCACTCCCTTTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SGLCKLPPAIANSSS*WFPLTVRGGHSLCS Trigger: AGAGCAAAGGGAGTGACCACCTCTGACTGTCAGGGGGAACCATCAGCTCGAACTGTTTGCTATGGCAGGAGGGAGTTTGCAGAGTCCGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000664665.1 |
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| CDS GCA 90 bp | GATGCCCATGCCAGGGACCAGCTTTCTCTGAGTTGCCAATCCTATTaGCAAAGGCCTTCCAACCAGAGTGACTCTATCTTGAGCAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: DAHARDQLSLSCQSY*QRPSNQSDSILSRG Trigger: GCCCCTGCTCAAGATAGAGTCACTCTGGTTGGAAGGCCTTTGGCAATAGGATTGGCAACTCAGAGAAAGCTGGTCCCTGGCATGGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS GCA 90 bp | TGCCTTGGGAGAGATGCCCATGCCAGGGACCAGCTTTCTCTGAGTTaGCAATCCTATTGCCAAAGGCCTTCCAACCAGAGTGACTCTATC | + |
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Preference number: 5 (lower is better) Translates to: CLGRDAHARDQLSLS*QSYCQRPSNQSDSI Trigger: GATAGAGTCACTCTGGTTGGAAGGCCTTTGGCAATAGGATTGGCAACTCAGAGAAAGCTGGTCCCTGGCATGGGCATCTCTCCCAAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS TCA 90 bp | GTCTTCCACGGCATAGCTCTGAATCTCCAGATCCTCTTTGATGGGTaGGATGAGCCAAGGACTGGGTGGGGCTGTCATGGTCAAACTCAA | + |
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Preference number: 5 (lower is better) Translates to: VFHGIALNLQILFDG*DEPRTGWGCHGQTQ Trigger: TTGAGTTTGACCATGACAGCCCCACCCAGTCCTTGGCTCATCTCACCCATCAAAGAGGATCTGGAGATTCAGAGCTATGCCGTGGAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS TCA 90 bp | AAGAATGCCTTGGGAGAGATGCCCATGCCAGGGACCAGCTTTCTCTaGGTTGCCAATCCTATTGCCAAAGGCCTTCCAACCAGAGTGACT | + |
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Preference number: 5 (lower is better) Translates to: KNALGEMPMPGTSFL*VANPIAKGLPTRVT Trigger: AGTCACTCTGGTTGGAAGGCCTTTGGCAATAGGATTGGCAACTCAGAGAAAGCTGGTCCCTGGCATGGGCATCTCTCCCAAGGCATTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS GCA 90 bp | CAGGTGCATTCCGAGGAGGTCAGGCATTATCTTGCTCTCCGTCTCTaGTGTTACGATGATAGTGCACACTCTGTGCAGAAAAGACGGCTC | + |
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Preference number: 5 (lower is better) Translates to: QVHSEEVRHYLALRL*CYDDSAHSVQKRRL Trigger: GAGCCGTCTTTTCTGCACAGAGTGTGCACTATCATCGTAACAGCAGAGACGGAGAGCAAGATAATGCCTGACCTCCTCGGAATGCACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661641.1 |
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| CDS CCA 90 bp | CATAGCAAACAGTTCGAGCTGATGGTTCCCCCTGACAGTCAGAGGTaGTCACTCCCTTTGCTCTACTTCCACACGCAGAAAGCATTCCCT | + |
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Preference number: 5 (lower is better) Translates to: HSKQFELMVPPDSQR*SLPLLYFHTQKAFP Trigger: AGGGAATGCTTTCTGCGTGTGGAAGTAGAGCAAAGGGAGTGACCACCTCTGACTGTCAGGGGGAACCATCAGCTCGAACTGTTTGCTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000664665.1 |
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| CDS CCA 90 bp | TTCAGGCTTAGAAACGCTAAGATGGGAGTGCCTGAGACGCCCCATTaGAGAAGTCTGGTGGAGTTGGAGCATGTAACTGGAACTCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: FRLRNAKMGVPETPH*RSLVELEHVTGTQG Trigger: ACCCTGAGTTCCAGTTACATGCTCCAACTCCACCAGACTTCTCCAATGGGGCGTCTCAGGCACTCCCATCTTAGCGTTTCTAAGCCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664665.1 |
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| CDS GCA 90 bp | AGGAGAAAGATCATGAGTTCAGGCTTAGAAACGCTAAGATGGGAGTaGCTGAGACGCCCCATTGGAGAAGTCTGGTGGAGTTGGAGCATG | + |
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Preference number: 5 (lower is better) Translates to: RRKIMSSGLETLRWE*LRRPIGEVWWSWSM Trigger: CATGCTCCAACTCCACCAGACTTCTCCAATGGGGCGTCTCAGGCACTCCCATCTTAGCGTTTCTAAGCCTGAACTCATGATCTTTCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664665.1 |
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| CDS GCA 90 bp | TTCAGCCTTAGTGCCATCAGCTTTGGAAGAATGCCTTGGGAGAGATaGCCATGCCAGGGACCAGCTTTCTCTGAGTTGCCAATCCTATTG | + |
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Preference number: 5 (lower is better) Translates to: FSLSAISFGRMPWER*PCQGPAFSELPILL Trigger: CAATAGGATTGGCAACTCAGAGAAAGCTGGTCCCTGGCATGGGCATCTCTCCCAAGGCATTCTTCCAAAGCTGATGGCACTAAGGCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661641.1 ENST00000669458.1 |
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| CDS CCA 90 bp | GGGACTCAGTGGGTCCATCAAGAATGGGGAGCAAAGCTCCCTGGCTaGAGAAACATAGGATCCATGCCAACACTCAGGAGAAGTTTCAAT | + |
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Preference number: 5 (lower is better) Translates to: GTQWVHQEWGAKLPG*RNIGSMPTLRRSFN Trigger: ATTGAAACTTCTCCTGAGTGTTGGCATGGATCCTATGTTTCTCCAGCCAGGGAGCTTTGCTCCCCATTCTTGATGGACCCACTGAGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS TCA 90 bp | GACCTGACCCTACTGAAACCCCAAAGTCCCATGAGCCCTGAAGTCTaGTTCGGTGGTTCATTGCAAAGACTAACATCAAGCGAGGGAACA | + |
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Preference number: 5 (lower is better) Translates to: DLTLLKPQSPMSPEV*FGGSLQRLTSSEGT Trigger: TGTTCCCTCGCTTGATGTTAGTCTTTGCAATGAACCACCGAATCAGACTTCAGGGCTCATGGGACTTTGGGGTTTCAGTAGGGTCAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000562956.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS TCA 90 bp | TTCTCTGAGTTGCCAATCCTATTGCCAAAGGCCTTCCAACCAGAGTaGCTCTATCTTGAGCAGGGGCTAGGCAAAATGAGGCTGAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: FSELPILLPKAFQPE*LYLEQGLGKMRLSP Trigger: AGGACTCAGCCTCATTTTGCCTAGCCCCTGCTCAAGATAGAGTCACTCTGGTTGGAAGGCCTTTGGCAATAGGATTGGCAACTCAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS GCA 90 bp | GGATTGCTGAGGACAGGTCTTATCAACATTCATCCTTTGGAAGAATaGCTTGGGAGAGATGCCCATGCCAGGGACCAGCTTTCTCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: GLLRTGLINIHPLEE*LGRDAHARDQLSLS Trigger: ACTCAGAGAAAGCTGGTCCCTGGCATGGGCATCTCTCCCAAGGCATTCTTCCAAAGGATGAATGTTGATAAGACCTGTCCTCAGCAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664665.1 |
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| CDS CCA 90 bp | AATTGGGACTCAGTGGGTCCATCAAGAATGGGGAGCAAAGCTCCCTaGCTGGAGAAACATAGGATCCATGCCAACACTCAGGAGAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: NWDSVGPSRMGSKAP*LEKHRIHANTQEKF Trigger: AAACTTCTCCTGAGTGTTGGCATGGATCCTATGTTTCTCCAGCCAGGGAGCTTTGCTCCCCATTCTTGATGGACCCACTGAGTCCCAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS CCA 90 bp | AGTTTGAGGAGAAAGATCATGAGTTCAGGCTTAGAAACGCTAAGATaGGAGTGCCTGAGACGCCCCATTGGAGAAGTCTGGTGGAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: SLRRKIMSSGLETLR*ECLRRPIGEVWWSW Trigger: CCAACTCCACCAGACTTCTCCAATGGGGCGTCTCAGGCACTCCCATCTTAGCGTTTCTAAGCCTGAACTCATGATCTTTCTCCTCAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664665.1 |
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| CDS TCA 90 bp | TCTCGGTGTCAGGACGAGGGTGTGACATCATGGTTACAGGAACCATaGCTTCCAAGCCCATCAGGGATCTCATTTCTTCAGATCATCATC | + |
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Preference number: 5 (lower is better) Translates to: SRCQDEGVTSWLQEP*LPSPSGISFLQIII Trigger: GATGATGATCTGAAGAAATGAGATCCCTGATGGGCTTGGAAGTCATGGTTCCTGTAACCATGATGTCACACCCTCGTCCTGACACCGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS GCA 90 bp | ATCTTGCTCTCCGTCTCTGCTGTTACGATGATAGTGCACACTCTGTaGAGAAAAGACGGCTCCACTTTACACGTACCCAGGCAGAATACT | + |
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Preference number: 5 (lower is better) Translates to: ILLSVSAVTMIVHTL*RKDGSTLHVPRQNT Trigger: AGTATTCTGCCTGGGTACGTGTAAAGTGGAGCCGTCTTTTCTGCACAGAGTGTGCACTATCATCGTAACAGCAGAGACGGAGAGCAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658358.1 |
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| CDS CCA 90 bp | AGAAGGAATATTAGCCAAGAGAAACTTACCTTTGGAGAACTGATGTaGTATCAGCTGGCTCGACTACAGCCTCTACTGGAGGCCCACCAG | + |
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Preference number: 5 (lower is better) Translates to: RRNISQEKLTFGELM*YQLARLQPLLEAHQ Trigger: CTGGTGGGCCTCCAGTAGAGGCTGTAGTCGAGCCAGCTGATACCACATCAGTTCTCCAAAGGTAAGTTTCTCTTGGCTAATATTCCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661641.1 ENST00000669458.1 |
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| CDS TCA 90 bp | TTGAGAGAAGGAATATTAGCCAAGAGAAACTTACCTTTGGAGAACTaGTGTGGTATCAGCTGGCTCGACTACAGCCTCTACTGGAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: LREGILAKRNLPLEN*CGISWLDYSLYWRP Trigger: GGGCCTCCAGTAGAGGCTGTAGTCGAGCCAGCTGATACCACATCAGTTCTCCAAAGGTAAGTTTCTCTTGGCTAATATTCCTTCTCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661641.1 ENST00000669458.1 |
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| CDS CCA 90 bp | CCTCCTTCTCAGGGAAATGATCAGGAAATGCCCAGATCTTTTCTTTaGAGAAAGCAGGTGTGTCCCTATAATACACCTTGTCCCCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: PPSQGNDQEMPRSFL*RKQVCPYNTPCPLG Trigger: GCCAAGGGGACAAGGTGTATTATAGGGACACACCTGCTTTCTCCAAAGAAAAGATCTGGGCATTTCCTGATCATTTCCCTGAGAAGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS TCA 90 bp | AAGAATGACTTAAATTACTCAGTCAAGACCGTTAAAGCTTTTTCATaGGGGCAGGACTCCGGACTCTGCAAACTCCCTCCTGCCATAGCA | + |
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Preference number: 5 (lower is better) Translates to: KNDLNYSVKTVKAFS*GQDSGLCKLPPAIA Trigger: TGCTATGGCAGGAGGGAGTTTGCAGAGTCCGGAGTCCTGCCCTCATGAAAAAGCTTTAACGGTCTTGACTGAGTAATTTAAGTCATTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000664665.1 |
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| CDS CCA 90 bp | GGATCCATGCCAACACTCAGGAGAAGTTTCAATGATGGAGGAGGCTaGCCAGATGTTCAGGTTAAATTTAAGGGTGTCGTTTCAGAGTTT | + |
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Preference number: 5 (lower is better) Translates to: GSMPTLRRSFNDGGG*PDVQVKFKGVVSEF Trigger: AAACTCTGAAACGACACCCTTAAATTTAACCTGAACATCTGGCCAGCCTCCTCCATCATTGAAACTTCTCCTGAGTGTTGGCATGGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS TCA 90 bp | GTGATCATGGTTGAGATCATCCAGAAAATTGAAAGAGAGGATTGCTaGGGACAGGTCTTATCAACATTCATCCTTTGGAAGAATGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: VIMVEIIQKIEREDC*GQVLSTFILWKNAL Trigger: CAAGGCATTCTTCCAAAGGATGAATGTTGATAAGACCTGTCCTCAGCAATCCTCTCTTTCAATTTTCTGGATGATCTCAACCATGATCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664665.1 |
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| CDS GCA 90 bp | GATCTTATGATATATCCCACTGTCCTTCCAATAAATTCCAGTTCTTaGTTGAGTTACTCAGAGTGGGTTTCCATTACTTGTAGCCAAACA | + |
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Preference number: 5 (lower is better) Translates to: DLMIYPTVLPINSSS*LSYSEWVSITCSQT Trigger: TGTTTGGCTACAAGTAATGGAAACCCACTCTGAGTAACTCAAGCAAGAACTGGAATTTATTGGAAGGACAGTGGGATATATCATAAGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS TCA 72 bp | AGGGATGAGCGGCCCCGGTGGTTGTCACTGGGCACCTaGACCCCACCTGCAGCACAGTATGGCCTGGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: RDERPRWLSLGT*TPPAAQYGLVL Trigger: GAGCACCAGGCCATACTGTGCTGCAGGTGGGGTTCAGGTGCCCAGTGACAACCACCGGGGCCGCTCATCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS CCA 72 bp | AGACGTTTAGGGATGAGCGGCCCCGGTGGTTGTCACTaGGCACCTGAACCCCACCTGCAGCACAGTATGGCC | + |
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Preference number: 6 (lower is better) Translates to: RRLGMSGPGGCH*APEPHLQHSMA Trigger: GGCCATACTGTGCTGCAGGTGGGGTTCAGGTGCCCAGTGACAACCACCGGGGCCGCTCATCCCTAAACGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS CCA 72 bp | TCTGGATCAGGATCCCTTTCCGGTACCACTGTGACCTaGCTGCACACGGTCCCCCTGAAGCCACAGGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: SGSGSLSGTTVT*LHTVPLKPQVE Trigger: CTCAACCTGTGGCTTCAGGGGGACCGTGTGCAGCCAGGTCACAGTGGTACCGGAAAGGGATCCTGATCCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000562956.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS CCA 72 bp | TGGGCACCTGAACCCCACCTGCAGCACAGTATGGCCTaGTGCTCTGACAAGGTCTTCCACGGCATAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: WAPEPHLQHSMA*CSDKVFHGIAL Trigger: CAGAGCTATGCCGTGGAAGACCTTGTCAGAGCACCAGGCCATACTGTGCTGCAGGTGGGGTTCAGGTGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS GCA 72 bp | GCACCTGAACCCCACCTGCAGCACAGTATGGCCTGGTaGTCTGACAAGGTCTTCCACGGCATAGCTCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: APEPHLQHSMAW*SDKVFHGIALN Trigger: ATTCAGAGCTATGCCGTGGAAGACCTTGTCAGAGCACCAGGCCATACTGTGCTGCAGGTGGGGTTCAGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS TCA 72 bp | TGCAAACTCCCTCCTGCCATAGCAAACAGTTCGAGCTaGTGGTTCCCCCTGACAGTCAGAGGTGGTCACTCC | + |
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Preference number: 6 (lower is better) Translates to: CKLPPAIANSSS*WFPLTVRGGHS Trigger: GGAGTGACCACCTCTGACTGTCAGGGGGAACCATCAGCTCGAACTGTTTGCTATGGCAGGAGGGAGTTTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000664665.1 |
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| CDS TCA 72 bp | ATGTGTCCAGCCCATCTCGGTGTCAGGACGAGGGTGTaGCATCATGGTTACAGGAACCATGACTTCCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: MCPAHLGVRTRV*HHGYRNHDFQA Trigger: GGCTTGGAAGTCATGGTTCCTGTAACCATGATGTCACACCCTCGTCCTGACACCGAGATGGGCTGGACACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS TCA 72 bp | GGCATAGCTCTGAATCTCCAGATCCTCTTTGATGGGTaGGATGAGCCAAGGACTGGGTGGGGCTGTCATGGT | + |
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Preference number: 6 (lower is better) Translates to: GIALNLQILFDG*DEPRTGWGCHG Trigger: ACCATGACAGCCCCACCCAGTCCTTGGCTCATCTCACCCATCAAAGAGGATCTGGAGATTCAGAGCTATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS GCA 72 bp | AGTGCCATCAGCTTTGGAAGAATGCCTTGGGAGAGATaGCCATGCCAGGGACCAGCTTTCTCTGAGTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: SAISFGRMPWER*PCQGPAFSELP Trigger: TGGCAACTCAGAGAAAGCTGGTCCCTGGCATGGGCATCTCTCCCAAGGCATTCTTCCAAAGCTGATGGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661641.1 ENST00000669458.1 |
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| CDS CCA 72 bp | CAGTTCGAGCTGATGGTTCCCCCTGACAGTCAGAGGTaGTCACTCCCTTTGCTCTACTTCCACACGCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: QFELMVPPDSQR*SLPLLYFHTQK Trigger: TTTCTGCGTGTGGAAGTAGAGCAAAGGGAGTGACCACCTCTGACTGTCAGGGGGAACCATCAGCTCGAACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000664665.1 |
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| CDS GCA 72 bp | AGAGATGCCCATGCCAGGGACCAGCTTTCTCTGAGTTaGCAATCCTATTGCCAAAGGCCTTCCAACCAGAGT | + |
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Preference number: 6 (lower is better) Translates to: RDAHARDQLSLS*QSYCQRPSNQS Trigger: ACTCTGGTTGGAAGGCCTTTGGCAATAGGATTGGCAACTCAGAGAAAGCTGGTCCCTGGCATGGGCATCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS CCA 72 bp | TGGGTCCATCAAGAATGGGGAGCAAAGCTCCCTGGCTaGAGAAACATAGGATCCATGCCAACACTCAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: WVHQEWGAKLPG*RNIGSMPTLRR Trigger: TCTCCTGAGTGTTGGCATGGATCCTATGTTTCTCCAGCCAGGGAGCTTTGCTCCCCATTCTTGATGGACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS CCA 72 bp | AGAAACGCTAAGATGGGAGTGCCTGAGACGCCCCATTaGAGAAGTCTGGTGGAGTTGGAGCATGTAACTGGA | + |
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Preference number: 6 (lower is better) Translates to: RNAKMGVPETPH*RSLVELEHVTG Trigger: TCCAGTTACATGCTCCAACTCCACCAGACTTCTCCAATGGGGCGTCTCAGGCACTCCCATCTTAGCGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664665.1 |
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| CDS CAA 90 bp | TTCGAGCTGATGGTTCCCCCTGACAGTCAGAGGTGGTCACTCCCTTaGCTCTACTTCCACACGCAGAAAGCATTCCCTATTTGTCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: FELMVPPDSQRWSLP*LYFHTQKAFPICLW Trigger: CCACAGACAAATAGGGAATGCTTTCTGCGTGTGGAAGTAGAGCAAAGGGAGTGACCACCTCTGACTGTCAGGGGGAACCATCAGCTCGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000664665.1 |
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| CDS TCA 72 bp | ATTGCCAAAGGCCTTCCAACCAGAGTGACTCTATCTTaGGCAGGGGCTAGGCAAAATGAGGCTGAGTCCTAC | + |
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Preference number: 6 (lower is better) Translates to: IAKGLPTRVTLS*AGARQNEAESY Trigger: GTAGGACTCAGCCTCATTTTGCCTAGCCCCTGCTCAAGATAGAGTCACTCTGGTTGGAAGGCCTTTGGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS GCA 72 bp | TGGTTCCCCCTGACAGTCAGAGGTGGTCACTCCCTTTaGTCTACTTCCACACGCAGAAAGCATTCCCTATTT | + |
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Preference number: 6 (lower is better) Translates to: WFPLTVRGGHSL*STSTRRKHSLF Trigger: AAATAGGGAATGCTTTCTGCGTGTGGAAGTAGAGCAAAGGGAGTGACCACCTCTGACTGTCAGGGGGAACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000664665.1 |
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| CDS GCA 72 bp | TCCGTCTCTGCTGTTACGATGATAGTGCACACTCTGTaGAGAAAAGACGGCTCCACTTTACACGTACCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SVSAVTMIVHTL*RKDGSTLHVPR Trigger: CCTGGGTACGTGTAAAGTGGAGCCGTCTTTTCTGCACAGAGTGTGCACTATCATCGTAACAGCAGAGACGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658358.1 ENST00000661641.1 |
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| CDS GCA 72 bp | TCATCCTTTGGAAGAATGCCTTGGGAGAGATGCCCATaGCAGGGACCAGCTTTCTCTGAGTTGCCAATCCTA | + |
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Preference number: 6 (lower is better) Translates to: SSFGRMPWERCP*QGPAFSELPIL Trigger: TAGGATTGGCAACTCAGAGAAAGCTGGTCCCTGGCATGGGCATCTCTCCCAAGGCATTCTTCCAAAGGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664665.1 |
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| CDS GCA 72 bp | ATCAGCTTTGGAAGAATGCCTTGGGAGAGATGCCCATaGCAGGGACCAGCTTTCTCTGAGTTGCCAATCCTA | + |
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Preference number: 6 (lower is better) Translates to: ISFGRMPWERCP*QGPAFSELPIL Trigger: TAGGATTGGCAACTCAGAGAAAGCTGGTCCCTGGCATGGGCATCTCTCCCAAGGCATTCTTCCAAAGCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661641.1 ENST00000669458.1 |
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| CDS CCA 72 bp | CTTCTGAAAGATGCAGACCAAGCATTTTGTTTGCCCTaGGTGACAGATGTGTCCAGCCCATCTCGGTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: LLKDADQAFCLP*VTDVSSPSRCQ Trigger: CTGACACCGAGATGGGCTGGACACATCTGTCACCCAGGGCAAACAAAATGCTTGGTCTGCATCTTTCAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS CAA 72 bp | ATGGTTCCCCCTGACAGTCAGAGGTGGTCACTCCCTTaGCTCTACTTCCACACGCAGAAAGCATTCCCTATT | + |
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Preference number: 6 (lower is better) Translates to: MVPPDSQRWSLP*LYFHTQKAFPI Trigger: AATAGGGAATGCTTTCTGCGTGTGGAAGTAGAGCAAAGGGAGTGACCACCTCTGACTGTCAGGGGGAACCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000664665.1 |
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| CDS CAA 72 bp | CTACTCAGGTGCATTCCGAGGAGGTCAGGCATTATCTaGCTCTCCGTCTCTGCTGTTACGATGATAGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: LLRCIPRRSGII*LSVSAVTMIVH Trigger: GTGCACTATCATCGTAACAGCAGAGACGGAGAGCAAGATAATGCCTGACCTCCTCGGAATGCACCTGAGTAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661641.1 |
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| CDS TCA 72 bp | CAGGACGAGGGTGTGACATCATGGTTACAGGAACCATaGCTTCCAAGCCCATCAGGGATCTCATTTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: QDEGVTSWLQEP*LPSPSGISFLQ Trigger: CTGAAGAAATGAGATCCCTGATGGGCTTGGAAGTCATGGTTCCTGTAACCATGATGTCACACCCTCGTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS TCA 72 bp | TTGCCAATCCTATTGCCAAAGGCCTTCCAACCAGAGTaGCTCTATCTTGAGCAGGGGCTAGGCAAAATGAGG | + |
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Preference number: 6 (lower is better) Translates to: LPILLPKAFQPE*LYLEQGLGKMR Trigger: CCTCATTTTGCCTAGCCCCTGCTCAAGATAGAGTCACTCTGGTTGGAAGGCCTTTGGCAATAGGATTGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS GCA 72 bp | AGGACAGGTCTTATCAACATTCATCCTTTGGAAGAATaGCTTGGGAGAGATGCCCATGCCAGGGACCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: RTGLINIHPLEE*LGRDAHARDQL Trigger: AAGCTGGTCCCTGGCATGGGCATCTCTCCCAAGGCATTCTTCCAAAGGATGAATGTTGATAAGACCTGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664665.1 |
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| CDS GCA 72 bp | TCCGAGGAGGTCAGGCATTATCTTGCTCTCCGTCTCTaGTGTTACGATGATAGTGCACACTCTGTGCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SEEVRHYLALRL*CYDDSAHSVQK Trigger: TTTCTGCACAGAGTGTGCACTATCATCGTAACAGCAGAGACGGAGAGCAAGATAATGCCTGACCTCCTCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661641.1 |
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| CDS CCA 72 bp | AGAAAGATCATGAGTTCAGGCTTAGAAACGCTAAGATaGGAGTGCCTGAGACGCCCCATTGGAGAAGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RKIMSSGLETLR*ECLRRPIGEVW Trigger: CCAGACTTCTCCAATGGGGCGTCTCAGGCACTCCCATCTTAGCGTTTCTAAGCCTGAACTCATGATCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664665.1 |
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| CDS CAA 72 bp | GGATTGCTGAGGACAGGTCTTATCAACATTCATCCTTaGGAAGAATGCCTTGGGAGAGATGCCCATGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GLLRTGLINIHP*EECLGRDAHAR Trigger: CCTGGCATGGGCATCTCTCCCAAGGCATTCTTCCAAAGGATGAATGTTGATAAGACCTGTCCTCAGCAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664665.1 |
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| CDS TCA 72 bp | TGCCTCATAGGTGACAGTACACTGGTAGGTAGAAATTaGCCTGACCCTACTGAAACCCCAAAGTCCCATGAG | + |
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Preference number: 6 (lower is better) Translates to: CLIGDSTLVGRN*PDPTETPKSHE Trigger: CTCATGGGACTTTGGGGTTTCAGTAGGGTCAGGTCAATTTCTACCTACCAGTGTACTGTCACCTATGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000562956.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS GCA 72 bp | TCAGCCTTAGTGCCATCAGATCTTGCTCTCCGTCTCTaGTGTTACGATGATAGTGCACACTCTGTGCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SALVPSDLALRL*CYDDSAHSVQK Trigger: TTTCTGCACAGAGTGTGCACTATCATCGTAACAGCAGAGACGGAGAGCAAGATCTGATGGCACTAAGGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658358.1 |
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| CDS CAA 90 bp | GTCACTCCCTTTGCTCTACTTCCACACGCAGAAAGCATTCCCTATTaGTCTGTGGCGAGTTCCATATGTTTCTTGTGGCATCTGCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: VTPFALLPHAESIPY*SVASSICFLWHLLA Trigger: TGCTAGCAGATGCCACAAGAAACATATGGAACTCGCCACAGACAAATAGGGAATGCTTTCTGCGTGTGGAAGTAGAGCAAAGGGAGTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000664665.1 |
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| CDS TCA 72 bp | CTACTGAAACCCCAAAGTCCCATGAGCCCTGAAGTCTaGTTCGGTGGTTCATTGCAAAGACTAACATCAAGC | + |
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Preference number: 6 (lower is better) Translates to: LLKPQSPMSPEV*FGGSLQRLTSS Trigger: GCTTGATGTTAGTCTTTGCAATGAACCACCGAATCAGACTTCAGGGCTCATGGGACTTTGGGGTTTCAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000562956.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS CCA 72 bp | ATTAGCCAAGAGAAACTTACCTTTGGAGAACTGATGTaGTATCAGCTGGCTCGACTACAGCCTCTACTGGAG | + |
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Preference number: 6 (lower is better) Translates to: ISQEKLTFGELM*YQLARLQPLLE Trigger: CTCCAGTAGAGGCTGTAGTCGAGCCAGCTGATACCACATCAGTTCTCCAAAGGTAAGTTTCTCTTGGCTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661641.1 ENST00000669458.1 |
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| CDS TCA 72 bp | GGAATATTAGCCAAGAGAAACTTACCTTTGGAGAACTaGTGTGGTATCAGCTGGCTCGACTACAGCCTCTAC | + |
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Preference number: 6 (lower is better) Translates to: GILAKRNLPLEN*CGISWLDYSLY Trigger: GTAGAGGCTGTAGTCGAGCCAGCTGATACCACATCAGTTCTCCAAAGGTAAGTTTCTCTTGGCTAATATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661641.1 ENST00000669458.1 |
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| CDS CCA 72 bp | CCAACACTCAGGAGAAGTTTCAATGATGGAGGAGGCTaGCCAGATGTTCAGGTTAAATTTAAGGGTGTCGTT | + |
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Preference number: 6 (lower is better) Translates to: PTLRRSFNDGGG*PDVQVKFKGVV Trigger: AACGACACCCTTAAATTTAACCTGAACATCTGGCCAGCCTCCTCCATCATTGAAACTTCTCCTGAGTGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS CAA 72 bp | TTTGCTCTACTTCCACACGCAGAAAGCATTCCCTATTaGTCTGTGGCGAGTTCCATATGTTTCTTGTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: FALLPHAESIPY*SVASSICFLWH Trigger: ATGCCACAAGAAACATATGGAACTCGCCACAGACAAATAGGGAATGCTTTCTGCGTGTGGAAGTAGAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000664665.1 |
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| CDS TCA 72 bp | AGCTCATTATACTTGAGGTATCTTCTTGGCTCACAATaGTTCCTCCTTCTCAGGGAAATGATCAGGAAATGC | + |
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Preference number: 6 (lower is better) Translates to: SSLYLRYLLGSQ*FLLLREMIRKC Trigger: GCATTTCCTGATCATTTCCCTGAGAAGGAGGAATCATTGTGAGCCAAGAAGATACCTCAAGTATAATGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS CAA 72 bp | TATCCCACTGTCCTTCCAATAAATTCCAGTTCTTGCTaGAGTTACTCAGAGTGGGTTTCCATTACTTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: YPTVLPINSSSC*SYSEWVSITCS Trigger: GCTACAAGTAATGGAAACCCACTCTGAGTAACTCAAGCAAGAACTGGAATTTATTGGAAGGACAGTGGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS TCA 72 bp | GTTGAGATCATCCAGAAAATTGAAAGAGAGGATTGCTaGGGACAGGTCTTATCAACATTCATCCTTTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: VEIIQKIEREDC*GQVLSTFILWK Trigger: CTTCCAAAGGATGAATGTTGATAAGACCTGTCCTCAGCAATCCTCTCTTTCAATTTTCTGGATGATCTCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664665.1 |
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| CDS CAA 72 bp | GATATATCCCACTGTCCTTCCAATAAATTCCAGTTCTaGCTTGAGTTACTCAGAGTGGGTTTCCATTACTTG | + |
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Preference number: 6 (lower is better) Translates to: DISHCPSNKFQF*LELLRVGFHYL Trigger: CAAGTAATGGAAACCCACTCTGAGTAACTCAAGCAAGAACTGGAATTTATTGGAAGGACAGTGGGATATATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS GCA 72 bp | ATATATCCCACTGTCCTTCCAATAAATTCCAGTTCTTaGTTGAGTTACTCAGAGTGGGTTTCCATTACTTGT | + |
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Preference number: 6 (lower is better) Translates to: IYPTVLPINSSS*LSYSEWVSITC Trigger: ACAAGTAATGGAAACCCACTCTGAGTAACTCAAGCAAGAACTGGAATTTATTGGAAGGACAGTGGGATATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS CAA 72 bp | ATTCCCTATTTGTCTGTGGCGAGTTCCATATGTTTCTaGTGGCATCTGCTAGCATTTCCGCTTAAAATAAAA | + |
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Preference number: 6 (lower is better) Translates to: IPYLSVASSICF*WHLLAFPLKIK Trigger: TTTTATTTTAAGCGGAAATGCTAGCAGATGCCACAAGAAACATATGGAACTCGCCACAGACAAATAGGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000664665.1 |
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| CDS CAA 90 bp | CTTATGATATATCCCACTGTCCTTCCAATAAATTCCAGTTCTTGCTaGAGTTACTCAGAGTGGGTTTCCATTACTTGTAGCCAAACAAAA | + |
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Preference number: 6 (lower is better) Translates to: LMIYPTVLPINSSSC*SYSEWVSITCSQTK Trigger: TTTTGTTTGGCTACAAGTAATGGAAACCCACTCTGAGTAACTCAAGCAAGAACTGGAATTTATTGGAAGGACAGTGGGATATATCATAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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| CDS CAA 72 bp | TGTGCTGCAGTTTCACATCTCAGAACATGGCTGATTTaGCTGTATGAAAGGGTATTTAATGTAGAAAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: CAAVSHLRTWLI*LYERVFNVESL Trigger: AAGACTTTCTACATTAAATACCCTTTCATACAGCAAAATCAGCCATGTTCTGAGATGTGAAACTGCAGCACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000562956.1 ENST00000658358.1 ENST00000661641.1 ENST00000664665.1 ENST00000669458.1 |
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