Pregenerated sensors for LINC00836 (Homo sapiens)
Ensembl gene IDs: ENSG00000280809Ensembl transcript IDs: ENST00000625325.2, ENST00000626230.2, ENST00000628620.1, ENST00000628907.2, ENST00000648557.1, ENST00000653175.1, ENST00000654120.1, ENST00000655020.1, ENST00000655478.1, ENST00000655555.1, ENST00000655854.1, ENST00000655911.1, ENST00000656265.1, ENST00000658893.1, ENST00000659066.1, ENST00000662090.1, ENST00000663043.1, ENST00000666205.1, ENST00000668934.1, ENST00000669089.1, ENST00000671596.1
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGAGAAAGAGAGCAGCAGAGCTCAGAAACCCAGCACGGCAGGGCTaGAGATCGAAATGCCTCCTCTTCCGACAGTATTTTCACGCACCC | + |
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Preference number: 5 (lower is better) Translates to: QRKRAAELRNPARQG*RSKCLLFRQYFHAP Trigger: GGGTGCGTGAAAATACTGTCGGAAGAGGAGGCATTTCGATCTGCAGCCCTGCCGTGCTGGGTTTCTGAGCTCTGCTGCTCTCTTTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000653175.1 ENST00000654120.1 ENST00000659066.1 |
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| CDS GCA 90 bp | GCCGGCTTCCCCTTGCACTTCTGGGCTGGAACCACTGAGGGATGCTaGTGTATCGAGTTCCACCATGGAGATACAAAACTGAAAGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: AGFPLHFWAGTTEGC*CIEFHHGDTKLKVG Trigger: CCCAACTTTCAGTTTTGTATCTCCATGGTGGAACTCGATACAGCAGCATCCCTCAGTGGTTCCAGCCCAGAAGTGCAAGGGGAAGCCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000628620.1 ENST00000655478.1 ENST00000655854.1 |
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| CDS GCA 90 bp | AACCACTTCTTGTCTGGCTTTGCCCAGGCCCTAGCACAGCATCTCTaGTTCTGGGCCCTAGAACAGGATTTGAAGCTCTACCTTCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: NHFLSGFAQALAQHL*FWALEQDLKLYLLG Trigger: GCCCAGAAGGTAGAGCTTCAAATCCTGTTCTAGGGCCCAGAAGCAGAGATGCTGTGCTAGGGCCTGGGCAAAGCCAGACAAGAAGTGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653175.1 ENST00000659066.1 |
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| CDS CCA 90 bp | AGCTACAGAATTCATGAACAGGCAGCCGGCTTCCCCTTGCACTTCTaGGCTGGAACCACTGAGGGATGCTGCTGTATCGAGTTCCACCAT | + |
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Preference number: 5 (lower is better) Translates to: SYRIHEQAAGFPLHF*AGTTEGCCCIEFHH Trigger: ATGGTGGAACTCGATACAGCAGCATCCCTCAGTGGTTCCAGCCCAGAAGTGCAAGGGGAAGCCGGCTGCCTGTTCATGAATTCTGTAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000628620.1 ENST00000655478.1 ENST00000655854.1 |
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| CDS CCA 90 bp | TTCTTGTCTGGCTTTGCCCAGGCCCTAGCACAGCATCTCTGCTTCTaGGCCCTAGAACAGGATTTGAAGCTCTACCTTCTGGGCGATGTC | + |
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Preference number: 5 (lower is better) Translates to: FLSGFAQALAQHLCF*ALEQDLKLYLLGDV Trigger: GACATCGCCCAGAAGGTAGAGCTTCAAATCCTGTTCTAGGGCCCAGAAGCAGAGATGCTGTGCTAGGGCCTGGGCAAAGCCAGACAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653175.1 ENST00000659066.1 |
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| CDS TCA 90 bp | GGCATCCCAGGCAGAAAAATCCTCAACAGTGTATCCATGCAAAAATaGGCATCTGGACCCTTGAGTGGGACGCACCAGTGCCCACCAGGA | + |
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Preference number: 5 (lower is better) Translates to: GIPGRKILNSVSMQK*ASGPLSGTHQCPPG Trigger: TCCTGGTGGGCACTGGTGCGTCCCACTCAAGGGTCCAGATGCTCATTTTTGCATGGATACACTGTTGAGGATTTTTCTGCCTGGGATGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS GCA 90 bp | GCAGCCGGCTTCCCCTTGCACTTCTGGGCTGGAACCACTGAGGGATaGTGCTGTATCGAGTTCCACCATGGAGATACAAAACTGAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: AAGFPLHFWAGTTEG*CCIEFHHGDTKLKV Trigger: AACTTTCAGTTTTGTATCTCCATGGTGGAACTCGATACAGCAGCATCCCTCAGTGGTTCCAGCCCAGAAGTGCAAGGGGAAGCCGGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000628620.1 ENST00000655478.1 ENST00000655854.1 |
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| CDS CCA 90 bp | TGCTGTTTATTTCACCTGGGTGCAGGCAGGCTGAGTCTCTGCTTCTaGGCCCTAGAACAGGATTTGAAGCTCTACCTTCTGGGCGATGTC | + |
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Preference number: 5 (lower is better) Translates to: CCLFHLGAGRLSLCF*ALEQDLKLYLLGDV Trigger: GACATCGCCCAGAAGGTAGAGCTTCAAATCCTGTTCTAGGGCCCAGAAGCAGAGACTCAGCCTGCCTGCACCCAGGTGAAATAAACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655020.1 ENST00000658893.1 |
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| CDS TCA 90 bp | GTCTGGCTTTGCCCAGGCCCTAGCACAGCATCTTCATGTGGCCAATaGATTGCCGGTCTGATTGGAAACTCTTTCCTGCACCGAAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: VWLCPGPSTASSCGQ*IAGLIGNSFLHRRN Trigger: GTTTCTTCGGTGCAGGAAAGAGTTTCCAATCAGACCGGCAATTCATTGGCCACATGAAGATGCTGTGCTAGGGCCTGGGCAAAGCCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000625325.2 ENST00000668934.1 |
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| CDS GCA 90 bp | TGGGTGGAACTGGTACCTTATAAAAGGGCAAGTTCCACCCCATCTTaGCTTCTTGCCTTCCACCATGTGAGGATGCAGCACAGACGCTTG | + |
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Preference number: 5 (lower is better) Translates to: WVELVPYKRASSTPS*LLAFHHVRMQHRRL Trigger: CAAGCGTCTGTGCTGCATCCTCACATGGTGGAAGGCAAGAAGGCAAGATGGGGTGGAACTTGCCCTTTTATAAGGTACCAGTTCCACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655478.1 |
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| CDS TCA 90 bp | AAATCCTCAACAGTGTATCCATGCAAAAATGAGCATCTGGACCCTTaGGTGGGACGCACCAGTGCCCACCAGGATTTGGGGTTTCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KSSTVYPCKNEHLDP*VGRTSAHQDLGFQG Trigger: CCCTTGAAACCCCAAATCCTGGTGGGCACTGGTGCGTCCCACTCAAGGGTCCAGATGCTCATTTTTGCATGGATACACTGTTGAGGATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS GCA 90 bp | CAAAAATGCTGTTTATTTCACCTGGGTGCAGGCAGGCTGAGTCTCTaGTTCTGGGCCCTAGAACAGGATTTGAAGCTCTACCTTCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: QKCCLFHLGAGRLSL*FWALEQDLKLYLLG Trigger: GCCCAGAAGGTAGAGCTTCAAATCCTGTTCTAGGGCCCAGAAGCAGAGACTCAGCCTGCCTGCACCCAGGTGAAATAAACAGCATTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655020.1 ENST00000658893.1 |
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| CDS CCA 90 bp | CCTCAACAGTGTATCCATGCAAAAATGAGCATCTGGACCCTTGAGTaGGACGCACCAGTGCCCACCAGGATTTGGGGTTTCAAGGGTATT | + |
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Preference number: 5 (lower is better) Translates to: PQQCIHAKMSIWTLE*DAPVPTRIWGFKGI Trigger: AATACCCTTGAAACCCCAAATCCTGGTGGGCACTGGTGCGTCCCACTCAAGGGTCCAGATGCTCATTTTTGCATGGATACACTGTTGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS TCA 90 bp | GCGCATCCATGTGAAGAGACCACCAAACAGGCTTCATGTGGCCAATaGATTGCCGGTCTGATTGGAAACTCTTTCCTGCACCGAAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: AHPCEETTKQASCGQ*IAGLIGNSFLHRRN Trigger: GTTTCTTCGGTGCAGGAAAGAGTTTCCAATCAGACCGGCAATTCATTGGCCACATGAAGCCTGTTTGGTGGTCTCTTCACATGGATGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663043.1 |
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| CDS GCA 90 bp | GGCAGAGACACTGAGTCTGAACGCCTGCGGATGGGTTCTAAAATCTaGTTTGATAGCAAAGTCCTCATGAGATGCTCTCACCAAAGCGTG | + |
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Preference number: 5 (lower is better) Translates to: GRDTESERLRMGSKI*FDSKVLMRCSHQSV Trigger: CACGCTTTGGTGAGAGCATCTCATGAGGACTTTGCTATCAAAGCAGATTTTAGAACCCATCCGCAGGCGTTCAGACTCAGTGTCTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS GCA 90 bp | GTTTTTCTCTGCCTCCAGCCCTCTGAATGTTCAGTGGTCCTGGGATaGTCTCATGCAAGCTCGTTTCACTGTGAGCTGATGAATCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: VFLCLQPSECSVVLG*SHASSFHCELMNQH Trigger: ATGCTGATTCATCAGCTCACAGTGAAACGAGCTTGCATGAGAGCATCCCAGGACCACTGAACATTCAGAGGGCTGGAGGCAGAGAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671596.1 |
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| CDS CCA 90 bp | GCTCTGGATTATGTATTAGTCTCTCAAGTGCCATCAATGCAACTCTaGCCCCAAGAGTCAGACCACGCCTCTGAATGTTCAGTGGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: ALDYVLVSQVPSMQL*PQESDHASECSVVL Trigger: CAGGACCACTGAACATTCAGAGGCGTGGTCTGACTCTTGGGGCCAGAGTTGCATTGATGGCACTTGAGAGACTAATACATAATCCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656265.1 ENST00000658893.1 |
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| CDS TCA 90 bp | CAAAAATGCTGTTTATTTCACCTGGGTGCAGGCAGGCTGAGTCTCTaGATGTTCAGTGGTCCTGGGATGCTCTCATGCAAGCTCGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: QKCCLFHLGAGRLSL*MFSGPGMLSCKLVS Trigger: TGAAACGAGCTTGCATGAGAGCATCCCAGGACCACTGAACATTCAGAGACTCAGCCTGCCTGCACCCAGGTGAAATAAACAGCATTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000626230.2 |
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| CDS TCA 90 bp | TTTATTTCACCTGGGTGCAGGCAGGCTGAGTCTTCATGTGGCCAATaGATTGCCGGTCTGATTGGAAACTCTTTCCTGCACCGAAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: FISPGCRQAESSCGQ*IAGLIGNSFLHRRN Trigger: GTTTCTTCGGTGCAGGAAAGAGTTTCCAATCAGACCGGCAATTCATTGGCCACATGAAGACTCAGCCTGCCTGCACCCAGGTGAAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655555.1 ENST00000671596.1 |
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| CDS GCA 90 bp | CATCCATGTGAAGAGACCACCAAACAGGCTATGTGTGAGCAAAAATaGTGTTTATTTCACCTGGGTGCAGGCAGGCTGAGTCGTGATCTG | + |
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Preference number: 5 (lower is better) Translates to: HPCEETTKQAMCEQK*CLFHLGAGRLSRDL Trigger: CAGATCACGACTCAGCCTGCCTGCACCCAGGTGAAATAAACAGCATTTTTGCTCACACATAGCCTGTTTGGTGGTCTCTTCACATGGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000625325.2 ENST00000653175.1 |
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| CDS GCA 90 bp | CATCCATGTGAAGAGACCACCAAACAGGCTATGTGTGAGCAAAAATaGTGTTTATTTCACCTGGGTGCAGGCAGGCTGAGTCTCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: HPCEETTKQAMCEQK*CLFHLGAGRLSLCF Trigger: GAAGCAGAGACTCAGCCTGCCTGCACCCAGGTGAAATAAACAGCATTTTTGCTCACACATAGCCTGTTTGGTGGTCTCTTCACATGGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655020.1 ENST00000658893.1 |
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| CDS CCA 90 bp | GACTTGAGGCCTTGCCTTGAACTCTTGAGTTTCTCTGTTCACCAGTaGGATCAGTTGGTTAGTCCCGATTCCCAAATTAGCCTCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: DLRPCLELLSFSVHQ*DQLVSPDSQISLCF Trigger: GAAGCAGAGGCTAATTTGGGAATCGGGACTAACCAACTGATCCCACTGGTGAACAGAGAAACTCAAGAGTTCAAGGCAAGGCCTCAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS CCA 90 bp | GCTCTGGATTATGTATTAGTCTCTCAAGTGCCATCAATGCAACTCTaGCCCCAAGAGTCAGACCACGCCTTCATGTGGCCAATGAATTGC | + |
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Preference number: 5 (lower is better) Translates to: ALDYVLVSQVPSMQL*PQESDHAFMWPMNC Trigger: GCAATTCATTGGCCACATGAAGGCGTGGTCTGACTCTTGGGGCCAGAGTTGCATTGATGGCACTTGAGAGACTAATACATAATCCAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655020.1 |
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| CDS GCA 90 bp | CATCCATGTGAAGAGACCACCAAACAGGCTATGTGTGAGCAAAAATaGTGTTTATTTCACCTGGGTGCAGGCAGGCTGAGTCTTCATGTG | + |
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Preference number: 5 (lower is better) Translates to: HPCEETTKQAMCEQK*CLFHLGAGRLSLHV Trigger: CACATGAAGACTCAGCCTGCCTGCACCCAGGTGAAATAAACAGCATTTTTGCTCACACATAGCCTGTTTGGTGGTCTCTTCACATGGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655555.1 ENST00000671596.1 |
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| CDS GCA 90 bp | CATCCATGTGAAGAGACCACCAAACAGGCTATGTGTGAGCAAAAATaGTGTTTATTTCACCTGGGTGCAGGCAGGCTGAGTCTTATACGG | + |
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Preference number: 5 (lower is better) Translates to: HPCEETTKQAMCEQK*CLFHLGAGRLSLIR Trigger: CCGTATAAGACTCAGCCTGCCTGCACCCAGGTGAAATAAACAGCATTTTTGCTCACACATAGCCTGTTTGGTGGTCTCTTCACATGGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648557.1 |
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| CDS GCA 90 bp | CATCCATGTGAAGAGACCACCAAACAGGCTATGTGTGAGCAAAAATaGTGTTTATTTCACCTGGGTGCAGGCAGGCTGAGTCTTCATTGT | + |
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Preference number: 5 (lower is better) Translates to: HPCEETTKQAMCEQK*CLFHLGAGRLSLHC Trigger: ACAATGAAGACTCAGCCTGCCTGCACCCAGGTGAAATAAACAGCATTTTTGCTCACACATAGCCTGTTTGGTGGTCTCTTCACATGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655478.1 ENST00000656265.1 |
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| CDS GCA 90 bp | CATCCATGTGAAGAGACCACCAAACAGGCTATGTGTGAGCAAAAATaGTGTTTATTTCACCTGGGTGCAGGCAGGCTGAGTCTGAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: HPCEETTKQAMCEQK*CLFHLGAGRLSLKR Trigger: TCTTTTCAGACTCAGCCTGCCTGCACCCAGGTGAAATAAACAGCATTTTTGCTCACACATAGCCTGTTTGGTGGTCTCTTCACATGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666205.1 |
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| CDS GCA 90 bp | CATCCATGTGAAGAGACCACCAAACAGGCTATGTGTGAGCAAAAATaGTGTTTATTTCACCTGGGTGCAGGCAGGCTGAGTCTTGTAGTA | + |
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Preference number: 5 (lower is better) Translates to: HPCEETTKQAMCEQK*CLFHLGAGRLSLVV Trigger: TACTACAAGACTCAGCCTGCCTGCACCCAGGTGAAATAAACAGCATTTTTGCTCACACATAGCCTGTTTGGTGGTCTCTTCACATGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662090.1 |
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| CDS CCA 90 bp | GCTCTGGATTATGTATTAGTCTCTCAAGTGCCATCAATGCAACTCTaGCCCCAAGAGTCAGACCACGCCTGGGAAATTGACAAGTCATAT | + |
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Preference number: 5 (lower is better) Translates to: ALDYVLVSQVPSMQL*PQESDHAWEIDKSY Trigger: ATATGACTTGTCAATTTCCCAGGCGTGGTCTGACTCTTGGGGCCAGAGTTGCATTGATGGCACTTGAGAGACTAATACATAATCCAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655478.1 |
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| CDS TCA 90 bp | CTTAAACATCCGTTACAAACTGGTGCTCAGGTGAGGTCATTCGCATaGCTGAGAATGTGGGATCATCAGCTGTCAACTGTCAGTATAGAG | + |
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Preference number: 5 (lower is better) Translates to: LKHPLQTGAQVRSFA*LRMWDHQLSTVSIE Trigger: CTCTATACTGACAGTTGACAGCTGATGATCCCACATTCTCAGTCATGCGAATGACCTCACCTGAGCACCAGTTTGTAACGGATGTTTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000628620.1 ENST00000655478.1 ENST00000655854.1 |
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| CDS CCA 90 bp | TGTGTAGGATTTGAAGTCCTGGTACCCAAAGGCAAAGCATCTTTGTaGGGTGTGTTCCATATCATTAACCCTGGTCATGCATGGCATTTT | + |
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Preference number: 5 (lower is better) Translates to: CVGFEVLVPKGKASL*GVFHIINPGHAWHF Trigger: AAAATGCCATGCATGACCAGGGTTAATGATATGGAACACACCCCACAAAGATGCTTTGCCTTTGGGTACCAGGACTTCAAATCCTACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655020.1 ENST00000655478.1 ENST00000656265.1 ENST00000658893.1 |
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| CDS TCA 90 bp | GTCCTCATGAGATGCTCTCACCAAAGCGTGAGATCCAGTGGTCTGTaGAGTCCTATGAAAGAATGGATACAAGAGAAATGCAGATTACTA | + |
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Preference number: 5 (lower is better) Translates to: VLMRCSHQSVRSSGL*SPMKEWIQEKCRLL Trigger: TAGTAATCTGCATTTCTCTTGTATCCATTCTTTCATAGGACTTCACAGACCACTGGATCTCACGCTTTGGTGAGAGCATCTCATGAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS CCA 90 bp | CTAATAAATGTCCATAAAATCTTTACAATCCATGTTCTTCTGCCATaGCTTCAGCCAGTCCCTCTGTTTGGGGTCCCTGATTTCCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: LINVHKIFTIHVLLP*LQPVPLFGVPDFLQ Trigger: TTGCAGGAAATCAGGGACCCCAAACAGAGGGACTGGCTGAAGCCATGGCAGAAGAACATGGATTGTAAAGATTTTATGGACATTTATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000628907.2 ENST00000669089.1 |
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| CDS CCA 90 bp | TTAGGTTGCTCTTTAGTCACCAGAAGCTGCAGTGTTGGAATCTCCTaGCCAGGTAGAGTTGAAAACGTGAATAGTAAATGTTTCCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: LGCSLVTRSCSVGIS*PGRVENVNSKCFPH Trigger: ATGAGGGAAACATTTACTATTCACGTTTTCAACTCTACCTGGCCAGGAGATTCCAACACTGCAGCTTCTGGTGACTAAAGAGCAACCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655478.1 |
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| CDS CCA 90 bp | AATTCAGTGATATTTCTCCCATTTGCTTTTGAAAGAAGAGAAATATaGCTCTGTTCCGCCCGGCTCACCGGCAGTCAGAGTTTAAGGTTA | + |
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Preference number: 5 (lower is better) Translates to: NSVIFLPFAFERREI*LCSARLTGSQSLRL Trigger: TAACCTTAAACTCTGACTGCCGGTGAGCCGGGCGGAACAGAGCCATATTTCTCTTCTTTCAAAAGCAAATGGGAGAAATATCACTGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669089.1 |
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| CDS GCA 90 bp | ACTGAAGCTCTTATGCATTGTGGTGGGAATGTAAAATTATGCAGCTaGTGTGAAAGACAGCTCGACAGTTCCTCAAAAATTAAACATAGA | + |
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Preference number: 5 (lower is better) Translates to: TEALMHCGGNVKLCS*CERQLDSSSKIKHR Trigger: TCTATGTTTAATTTTTGAGGAACTGTCGAGCTGTCTTTCACAGCAGCTGCATAATTTTACATTCCCACCACAATGCATAAGAGCTTCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 14 transcripts: ENST00000626230.2 ENST00000648557.1 ENST00000653175.1 ENST00000655020.1 ENST00000655478.1 ENST00000655555.1 ENST00000655854.1 ENST00000655911.1 ENST00000656265.1 ENST00000658893.1 ENST00000662090.1 ENST00000663043.1 ENST00000666205.1 ENST00000671596.1 |
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| CDS TCA 90 bp | TTGTGTATTAAGAAGAGAAACACAAGTCTATTCTTGCGGACGCATTaGAAGTATGAAGTAAAAACACAAACACAGAAATCTGGAGCACTC | + |
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Preference number: 5 (lower is better) Translates to: LCIKKRNTSLFLRTH*KYEVKTQTQKSGAL Trigger: GAGTGCTCCAGATTTCTGTGTTTGTGTTTTTACTTCATACTTTCAATGCGTCCGCAAGAATAGACTTGTGTTTCTCTTCTTAATACACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655478.1 ENST00000655854.1 |
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| CDS TCA 90 bp | AGACAGCTCGACAGTTCCTCAAAAATTAAACATAGAATTGACATATaGTCCAGTAATTCCGCTCCTAAGTATATACCCCAAACAATTCAA | + |
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Preference number: 5 (lower is better) Translates to: RQLDSSSKIKHRIDI*SSNSAPKYIPQTIQ Trigger: TTGAATTGTTTGGGGTATATACTTAGGAGCGGAATTACTGGATCATATGTCAATTCTATGTTTAATTTTTGAGGAACTGTCGAGCTGTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 14 transcripts: ENST00000626230.2 ENST00000648557.1 ENST00000653175.1 ENST00000655020.1 ENST00000655478.1 ENST00000655555.1 ENST00000655854.1 ENST00000655911.1 ENST00000656265.1 ENST00000658893.1 ENST00000662090.1 ENST00000663043.1 ENST00000666205.1 ENST00000671596.1 |
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| CDS TCA 90 bp | TTGCCATTTATGTTGTTAACTCATTTAAACATCACTGCAACTCACTaGGGAAGGTACTGTTGTTATCATCCCCCATTTATAGAAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: LPFMLLTHLNITATH*GRYCCYHPPFIEEE Trigger: TTCTTCTTCTATAAATGGGGGATGATAACAACAGTACCTTCCTCAGTGAGTTGCAGTGATGTTTAAATGAGTTAACAACATAAATGGCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS TCA 90 bp | ATAGGAAATCACAAGGGTATTGATTGGGGAAGTGATAAGTGTCCATaGAATCTTTACAATTTATGTTTAGAAAGTGCAGTAAAGACAGGC | + |
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Preference number: 5 (lower is better) Translates to: IGNHKGIDWGSDKCP*NLYNLCLESAVKTG Trigger: GCCTGTCTTTACTGCACTTTCTAAACATAAATTGTAAAGATTTCATGGACACTTATCACTTCCCCAATCAATACCCTTGTGATTTCCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669089.1 |
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| CDS GCA 72 bp | GCTACAGAATTCATGAACAGGCAGCCGGCTTCCCCTTaGACTTCTGGGCTGGAACCACTGAGGGATGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: ATEFMNRQPASP*TSGLEPLRDAA Trigger: AGCAGCATCCCTCAGTGGTTCCAGCCCAGAAGTGCAAGGGGAAGCCGGCTGCCTGTTCATGAATTCTGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000628620.1 ENST00000655478.1 ENST00000655854.1 |
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| CDS CCA 72 bp | ATTCATGAACAGGCAGCCGGCTTCCCCTTGCACTTCTaGGCTGGAACCACTGAGGGATGCTGCTGTATCGAG | + |
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Preference number: 6 (lower is better) Translates to: IHEQAAGFPLHF*AGTTEGCCCIE Trigger: CTCGATACAGCAGCATCCCTCAGTGGTTCCAGCCCAGAAGTGCAAGGGGAAGCCGGCTGCCTGTTCATGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000628620.1 ENST00000655478.1 ENST00000655854.1 |
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| CDS CAA 72 bp | AGCTACAGAATTCATGAACAGGCAGCCGGCTTCCCCTaGCACTTCTGGGCTGGAACCACTGAGGGATGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SYRIHEQAAGFP*HFWAGTTEGCC Trigger: GCAGCATCCCTCAGTGGTTCCAGCCCAGAAGTGCAAGGGGAAGCCGGCTGCCTGTTCATGAATTCTGTAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000628620.1 ENST00000655478.1 ENST00000655854.1 |
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| CDS TCA 72 bp | GTTCCACCCCATCTTGCCTTCTTGCCTTCCACCATGTaGGGATGCAGCACAGACGCTTGCACTTGCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: VPPHLAFLPSTM*GCSTDACTCTR Trigger: TCTGGTGCAAGTGCAAGCGTCTGTGCTGCATCCTCACATGGTGGAAGGCAAGAAGGCAAGATGGGGTGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655478.1 |
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| CDS GCA 72 bp | CTCAGAAACCCAGCACGGCAGGGCTGCAGATCGAAATaGCTCCTCTTCCGACAGTATTTTCACGCACCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LRNPARQGCRSK*LLFRQYFHAPS Trigger: TGAGGGTGCGTGAAAATACTGTCGGAAGAGGAGGCATTTCGATCTGCAGCCCTGCCGTGCTGGGTTTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654120.1 ENST00000659066.1 |
||
| CDS CCA 72 bp | CCTGGGTGCAGGCAGGCTGAGTCTCTGAATGTTCAGTaGTCCTGGGATGCTCTCATGCAAGCTCGTTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: PGCRQAESLNVQ*SWDALMQARFT Trigger: AGTGAAACGAGCTTGCATGAGAGCATCCCAGGACCACTGAACATTCAGAGACTCAGCCTGCCTGCACCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626230.2 |
||
| CDS CCA 72 bp | GGCCCCAAGAGTCAGACCACGCCTCTGAATGTTCAGTaGTCCTGGGATGCTCTCATGCAAGCTCGTTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: GPKSQTTPLNVQ*SWDALMQARFT Trigger: AGTGAAACGAGCTTGCATGAGAGCATCCCAGGACCACTGAACATTCAGAGGCGTGGTCTGACTCTTGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656265.1 |
||
| CDS CAA 90 bp | TGGCGGGCAGGGTTGGGGGTCACAAGGTGCTCAGTAGGGGAGCTTTaGAGCCAGGATGAGCCAGGAGAAGGAATTTCACAAGATAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: WRAGLGVTRCSVGEL*SQDEPGEGISQDNV Trigger: GACATTATCTTGTGAAATTCCTTCTCCTGGCTCATCCTGGCTCAAAAGCTCCCCTACTGAGCACCTTGTGACCCCCAACCCTGCCCGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666205.1 |
||
| CDS TCA 72 bp | GCCATGGCTTCAGCCAGTCCCTCTGTTTGGGGTCCCTaGTTTCCTGCAACAGTGAGCTATGACTGTACCACT | + |
|
Preference number: 6 (lower is better) Translates to: AMASASPSVWGP*FPATVSYDCTT Trigger: AGTGGTACAGTCATAGCTCACTGTTGCAGGAAATCAGGGACCCCAAACAGAGGGACTGGCTGAAGCCATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000628907.2 ENST00000669089.1 |
||
| CDS TCA 72 bp | ACAGTGTATCCATGCAAAAATGAGCATCTGGACCCTTaGGTGGGACGCACCAGTGCCCACCAGGATTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TVYPCKNEHLDP*VGRTSAHQDLG Trigger: CCCCAAATCCTGGTGGGCACTGGTGCGTCCCACTCAAGGGTCCAGATGCTCATTTTTGCATGGATACACTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654120.1 |
||
| CDS TCA 72 bp | GGCCCCAAGAGTCAGACCACGCCTTCATGTGGCCAATaGATTGCCGGTCTGATTGGAAACTCTTTCCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GPKSQTTPSCGQ*IAGLIGNSFLH Trigger: GTGCAGGAAAGAGTTTCCAATCAGACCGGCAATTCATTGGCCACATGAAGGCGTGGTCTGACTCTTGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655020.1 |
||
| CDS GCA 72 bp | TTGTCTGGCTTTGCCCAGGCCCTAGCACAGCATCTCTaGTTCTGGGCCCTAGAACAGGATTTGAAGCTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: LSGFAQALAQHL*FWALEQDLKLY Trigger: GTAGAGCTTCAAATCCTGTTCTAGGGCCCAGAAGCAGAGATGCTGTGCTAGGGCCTGGGCAAAGCCAGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653175.1 ENST00000659066.1 |
||
| CDS GCA 72 bp | TGCCTCCAGCCCTCTGAATGTTCAGTGGTCCTGGGATaGTCTCATGCAAGCTCGTTTCACTGTGAGCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: CLQPSECSVVLG*SHASSFHCELM Trigger: CATCAGCTCACAGTGAAACGAGCTTGCATGAGAGCATCCCAGGACCACTGAACATTCAGAGGGCTGGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671596.1 |
||
| CDS CCA 72 bp | TTCTCTGCCTCCAGCCCTCTGAATGTTCAGTGGTCCTaGGATGCTCTCATGCAAGCTCGTTTCACTGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FSASSPLNVQWS*DALMQARFTVS Trigger: GCTCACAGTGAAACGAGCTTGCATGAGAGCATCCCAGGACCACTGAACATTCAGAGGGCTGGAGGCAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000628907.2 ENST00000671596.1 |
||
| CDS CCA 72 bp | TTTCACCTGGGTGCAGGCAGGCTGAGTCTCTGCTTCTaGGCCCTAGAACAGGATTTGAAGCTCTACCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: FHLGAGRLSLCF*ALEQDLKLYLL Trigger: CAGAAGGTAGAGCTTCAAATCCTGTTCTAGGGCCCAGAAGCAGAGACTCAGCCTGCCTGCACCCAGGTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655020.1 ENST00000658893.1 |
||
| CDS CAA 72 bp | GCACAGACGCTTGCACTTGCACCAGATGCTGGCACTTaGGTCTTGAACTTTCCAGCCTCCAGAACTGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: AQTLALAPDAGT*VLNFPASRTVS Trigger: GCTCACAGTTCTGGAGGCTGGAAAGTTCAAGACCAAAGTGCCAGCATCTGGTGCAAGTGCAAGCGTCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655478.1 |
||
| CDS CAA 72 bp | GGGTTGGGGGTCACAAGGTGCTCAGTAGGGGAGCTTTaGAGCCAGGATGAGCCAGGAGAAGGAATTTCACAA | + |
|
Preference number: 6 (lower is better) Translates to: GLGVTRCSVGEL*SQDEPGEGISQ Trigger: TTGTGAAATTCCTTCTCCTGGCTCATCCTGGCTCAAAAGCTCCCCTACTGAGCACCTTGTGACCCCCAACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666205.1 |
||
| CDS CAA 90 bp | TGCTTTTTGAGCTACAGAATTCATGAACAGGCAGCCGGCTTCCCCTaGCACTTCTGGGCTGGAACCACTGAGGGATGCTGCTGTATCGAG | + |
|
Preference number: 6 (lower is better) Translates to: CFLSYRIHEQAAGFP*HFWAGTTEGCCCIE Trigger: CTCGATACAGCAGCATCCCTCAGTGGTTCCAGCCCAGAAGTGCAAGGGGAAGCCGGCTGCCTGTTCATGAATTCTGTAGCTCAAAAAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000628620.1 ENST00000655478.1 ENST00000655854.1 |
||
| CDS CAA 90 bp | CAGGCCCTAGCACAGCATCTCTGCTTCTGGGCCCTAGAACAGGATTaGAAGCTCTACCTTCTGGGCGATGTCTTCAAGTCTCCTGTTACC | + |
|
Preference number: 6 (lower is better) Translates to: QALAQHLCFWALEQD*KLYLLGDVFKSPVT Trigger: GGTAACAGGAGACTTGAAGACATCGCCCAGAAGGTAGAGCTTCAAATCCTGTTCTAGGGCCCAGAAGCAGAGATGCTGTGCTAGGGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653175.1 ENST00000659066.1 |
||
| CDS CAA 90 bp | GGTGCAGGCAGGCTGAGTCTCTGCTTCTGGGCCCTAGAACAGGATTaGAAGCTCTACCTTCTGGGCGATGTCTTCAAGTCTCCTTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: GAGRLSLCFWALEQD*KLYLLGDVFKSPSL Trigger: CAATGAAGGAGACTTGAAGACATCGCCCAGAAGGTAGAGCTTCAAATCCTGTTCTAGGGCCCAGAAGCAGAGACTCAGCCTGCCTGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655020.1 ENST00000658893.1 |
||
| CDS GCA 72 bp | CCCTTGCACTTCTGGGCTGGAACCACTGAGGGATGCTaGTGTATCGAGTTCCACCATGGAGATACAAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: PLHFWAGTTEGC*CIEFHHGDTKL Trigger: CAGTTTTGTATCTCCATGGTGGAACTCGATACAGCAGCATCCCTCAGTGGTTCCAGCCCAGAAGTGCAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000628620.1 ENST00000655478.1 ENST00000655854.1 |
||
| CDS GCA 72 bp | TCAGACCACGCCTCTGAATGTTCAGTGGTCCTGGGATaGTCTCATGCAAGCTCGTTTCACTGTGAGCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: SDHASECSVVLG*SHASSFHCELM Trigger: CATCAGCTCACAGTGAAACGAGCTTGCATGAGAGCATCCCAGGACCACTGAACATTCAGAGGCGTGGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656265.1 |
||
| CDS CCA 72 bp | TGTATCCATGCAAAAATGAGCATCTGGACCCTTGAGTaGGACGCACCAGTGCCCACCAGGATTTGGGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: CIHAKMSIWTLE*DAPVPTRIWGF Trigger: GAAACCCCAAATCCTGGTGGGCACTGGTGCGTCCCACTCAAGGGTCCAGATGCTCATTTTTGCATGGATACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654120.1 |
||
| CDS CCA 72 bp | AATCCTCAACAGTGTATCCATGCAAAAATGAGCATCTaGACCCTTGAGTGGGACGCACCAGTGCCCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: NPQQCIHAKMSI*TLEWDAPVPTR Trigger: CCTGGTGGGCACTGGTGCGTCCCACTCAAGGGTCCAGATGCTCATTTTTGCATGGATACACTGTTGAGGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654120.1 |
||
| CDS CCA 72 bp | AAGAGTCAGACCACGCCTCTGAATGTTCAGTGGTCCTaGGATGCTCTCATGCAAGCTCGTTTCACTGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: KSQTTPLNVQWS*DALMQARFTVS Trigger: GCTCACAGTGAAACGAGCTTGCATGAGAGCATCCCAGGACCACTGAACATTCAGAGGCGTGGTCTGACTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656265.1 |
||
| CDS CAA 90 bp | CCCGATTCCCAAATTAGCCTCTGCTTCTGGGCCCTAGAACAGGATTaGAAGCTCTACCTTCTGGGCGATGTCTTCAAGTCTCCTGTTACC | + |
|
Preference number: 6 (lower is better) Translates to: PDSQISLCFWALEQD*KLYLLGDVFKSPVT Trigger: GGTAACAGGAGACTTGAAGACATCGCCCAGAAGGTAGAGCTTCAAATCCTGTTCTAGGGCCCAGAAGCAGAGGCTAATTTGGGAATCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654120.1 |
||
| CDS CAA 90 bp | GAGGATGCAGCACAGACGCTTGCACTTGCACCAGATGCTGGCACTTaGGTCTTGAACTTTCCAGCCTCCAGAACTGTGAGCCAATACATT | + |
|
Preference number: 6 (lower is better) Translates to: EDAAQTLALAPDAGT*VLNFPASRTVSQYI Trigger: AATGTATTGGCTCACAGTTCTGGAGGCTGGAAAGTTCAAGACCAAAGTGCCAGCATCTGGTGCAAGTGCAAGCGTCTGTGCTGCATCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655478.1 |
||
| CDS TCA 72 bp | TGTTTATTTCACCTGGGTGCAGGCAGGCTGAGTCTCTaGATGTTCAGTGGTCCTGGGATGCTCTCATGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: CLFHLGAGRLSL*MFSGPGMLSCK Trigger: CTTGCATGAGAGCATCCCAGGACCACTGAACATTCAGAGACTCAGCCTGCCTGCACCCAGGTGAAATAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626230.2 |
||
| CDS GCA 72 bp | TTCCCCTTGCACTTCTGGGCTGGAACCACTGAGGGATaGTGCTGTATCGAGTTCCACCATGGAGATACAAAA | + |
|
Preference number: 6 (lower is better) Translates to: FPLHFWAGTTEG*CCIEFHHGDTK Trigger: TTTTGTATCTCCATGGTGGAACTCGATACAGCAGCATCCCTCAGTGGTTCCAGCCCAGAAGTGCAAGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000628620.1 ENST00000655478.1 ENST00000655854.1 |
||
| CDS GCA 72 bp | CTGGTACCTTATAAAAGGGCAAGTTCCACCCCATCTTaGCTTCTTGCCTTCCACCATGTGAGGATGCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LVPYKRASSTPS*LLAFHHVRMQH Trigger: GTGCTGCATCCTCACATGGTGGAAGGCAAGAAGGCAAGATGGGGTGGAACTTGCCCTTTTATAAGGTACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655478.1 |
||
| CDS GCA 72 bp | CAAGAGTCAGACCACGCCTTCATGTGGCCAATGAATTaGCGGTCTGATTGGAAACTCTTTCCTGCACCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QESDHAFMWPMN*RSDWKLFPAPK Trigger: CTTCGGTGCAGGAAAGAGTTTCCAATCAGACCGGCAATTCATTGGCCACATGAAGGCGTGGTCTGACTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655020.1 |
||
| CDS CCA 72 bp | GTGATGATGAAGCAATCCTCAGGGGAGTCTGGAACTTaGGCCTGGGTGTTCAAGTCACCCATGCTTCAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: VMMKQSSGESGT*AWVFKSPMLQS Trigger: ACTTTGAAGCATGGGTGACTTGAACACCCAGGCCCAAGTTCCAGACTCCCCTGAGGATTGCTTCATCATCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654120.1 |
||
| CDS CAA 72 bp | ACGCTTGCACTTGCACCAGATGCTGGCACTTTGGTCTaGAACTTTCCAGCCTCCAGAACTGTGAGCCAATAC | + |
|
Preference number: 6 (lower is better) Translates to: TLALAPDAGTLV*NFPASRTVSQY Trigger: GTATTGGCTCACAGTTCTGGAGGCTGGAAAGTTCAAGACCAAAGTGCCAGCATCTGGTGCAAGTGCAAGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655478.1 |
||
| CDS CAA 72 bp | GCACAGCATCTCTGCTTCTGGGCCCTAGAACAGGATTaGAAGCTCTACCTTCTGGGCGATGTCTTCAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: AQHLCFWALEQD*KLYLLGDVFKS Trigger: AGACTTGAAGACATCGCCCAGAAGGTAGAGCTTCAAATCCTGTTCTAGGGCCCAGAAGCAGAGATGCTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653175.1 ENST00000659066.1 |
||
| CDS CAA 72 bp | ATAGATGTTAGTCAGCCTGATAGCAGGAACCACTTCTaGTCTGGCTTTGCCCAGGCCCTAGCACAGCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: IDVSQPDSRNHF*SGFAQALAQHL Trigger: GAGATGCTGTGCTAGGGCCTGGGCAAAGCCAGACAAGAAGTGGTTCCTGCTATCAGGCTGACTAACATCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653175.1 ENST00000659066.1 |
||
| CDS CAA 72 bp | AGGCTGAGTCTCTGCTTCTGGGCCCTAGAACAGGATTaGAAGCTCTACCTTCTGGGCGATGTCTTCAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RLSLCFWALEQD*KLYLLGDVFKS Trigger: AGACTTGAAGACATCGCCCAGAAGGTAGAGCTTCAAATCCTGTTCTAGGGCCCAGAAGCAGAGACTCAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655020.1 ENST00000658893.1 |
||
| CDS CAA 90 bp | CCTTGCCTTGAACTCTTGAGTTTCTCTGTTCACCAGTGGGATCAGTaGGTTAGTCCCGATTCCCAAATTAGCCTCTGCTTCTGGGCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: PCLELLSFSVHQWDQ*VSPDSQISLCFWAL Trigger: TAGGGCCCAGAAGCAGAGGCTAATTTGGGAATCGGGACTAACCAACTGATCCCACTGGTGAACAGAGAAACTCAAGAGTTCAAGGCAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654120.1 |
||
| CDS CAA 90 bp | GCAGCACAGACGCTTGCACTTGCACCAGATGCTGGCACTTTGGTCTaGAACTTTCCAGCCTCCAGAACTGTGAGCCAATACATTTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AAQTLALAPDAGTLV*NFPASRTVSQYISL Trigger: AAGAGAAATGTATTGGCTCACAGTTCTGGAGGCTGGAAAGTTCAAGACCAAAGTGCCAGCATCTGGTGCAAGTGCAAGCGTCTGTGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655478.1 |
||
| CDS TCA 72 bp | CCGTTACAAACTGGTGCTCAGGTGAGGTCATTCGCATaGCTGAGAATGTGGGATCATCAGCTGTCAACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PLQTGAQVRSFA*LRMWDHQLSTV Trigger: GACAGTTGACAGCTGATGATCCCACATTCTCAGTCATGCGAATGACCTCACCTGAGCACCAGTTTGTAACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000628620.1 ENST00000655478.1 ENST00000655854.1 |
||
| CDS TCA 72 bp | GGCAGAAAAATCCTCAACAGTGTATCCATGCAAAAATaGGCATCTGGACCCTTGAGTGGGACGCACCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GRKILNSVSMQK*ASGPLSGTHQC Trigger: GCACTGGTGCGTCCCACTCAAGGGTCCAGATGCTCATTTTTGCATGGATACACTGTTGAGGATTTTTCTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000654120.1 |
||
| CDS TCA 72 bp | AGACCACGCCTTCATGTGGCCAATGAATTGCCGGTCTaGTTGGAAACTCTTTCCTGCACCGAAGAAACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RPRLHVANELPV*LETLSCTEETA Trigger: TGCAGTTTCTTCGGTGCAGGAAAGAGTTTCCAATCAGACCGGCAATTCATTGGCCACATGAAGGCGTGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655020.1 |
||
| CDS TCA 72 bp | TCCGAGTCACAGCACCAAATTTCATGCGCATCCATGTaGAGAGACCACCAAACAGGCTTCATGTGGCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: SESQHQISCASM*RDHQTGFMWPM Trigger: CATTGGCCACATGAAGCCTGTTTGGTGGTCTCTTCACATGGATGCGCATGAAATTTGGTGCTGTGACTCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663043.1 |
||
| CDS GCA 72 bp | AGAGACCACCAAACAGGCTTCATGTGGCCAATGAATTaGCGGTCTGATTGGAAACTCTTTCCTGCACCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RDHQTGFMWPMN*RSDWKLFPAPK Trigger: CTTCGGTGCAGGAAAGAGTTTCCAATCAGACCGGCAATTCATTGGCCACATGAAGCCTGTTTGGTGGTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663043.1 |
||
| CDS CCA 72 bp | AAGTTTTTCTCTGCCTCCAGCCCTCTGAATGTTCAGTaGTCCTGGGATGCTCTCATGCAAGCTCGTTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: KFFSASSPLNVQ*SWDALMQARFT Trigger: AGTGAAACGAGCTTGCATGAGAGCATCCCAGGACCACTGAACATTCAGAGGGCTGGAGGCAGAGAAAAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000628907.2 ENST00000655020.1 ENST00000663043.1 ENST00000671596.1 |
||
| CDS CCA 72 bp | CCAAGTCTCCTGGGTTTACACAACCAGTGTTATAATTaGACAGCCGGGCTCTTTGTCATTTCCCAGGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PSLLGLHNQCYN*TAGLFVISQAL Trigger: GAGAGCCTGGGAAATGACAAAGAGCCCGGCTGTCCAATTATAACACTGGTTGTGTAAACCCAGGAGACTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654120.1 |
||
| CDS CCA 72 bp | TATGTATTAGTCTCTCAAGTGCCATCAATGCAACTCTaGCCCCAAGAGTCAGACCACGCCTTCATGTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: YVLVSQVPSMQL*PQESDHAFMWP Trigger: TGGCCACATGAAGGCGTGGTCTGACTCTTGGGGCCAGAGTTGCATTGATGGCACTTGAGAGACTAATACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655020.1 |
||
| CDS CAA 72 bp | ATAGATGTTAGTCAGCCTGATAGCAGGAACCACTTCTaGTCTGGCTTTGCCCAGGCCCTAGCACAGCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: IDVSQPDSRNHF*SGFAQALAQHL Trigger: AAGATGCTGTGCTAGGGCCTGGGCAAAGCCAGACAAGAAGTGGTTCCTGCTATCAGGCTGACTAACATCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000625325.2 ENST00000668934.1 |
||
| CDS CAA 90 bp | ATGTGGGATCATCAGCTGTCAACTGTCAGTATAGAGAGACCAGCATaGAAGGAGGAAGCTGTTCTCAGCTATCGTGCTGAGCAAGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: MWDHQLSTVSIERPA*KEEAVLSYRAEQGL Trigger: GAGACCTTGCTCAGCACGATAGCTGAGAACAGCTTCCTCCTTCAATGCTGGTCTCTCTATACTGACAGTTGACAGCTGATGATCCCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000628620.1 ENST00000655478.1 ENST00000655854.1 |
||
| CDS TCA 72 bp | GCACAGCATCTTCATGTGGCCAATGAATTGCCGGTCTaGTTGGAAACTCTTTCCTGCACCGAAGAAACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AQHLHVANELPV*LETLSCTEETA Trigger: TGCAGTTTCTTCGGTGCAGGAAAGAGTTTCCAATCAGACCGGCAATTCATTGGCCACATGAAGATGCTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000625325.2 ENST00000668934.1 |
||
| CDS TCA 72 bp | CTGGCTGTTCTTCATGTGGCCAATGAATTGCCGGTCTaGTTGGAAACTCTTTCCTGCACCGAAGAAACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LAVLHVANELPV*LETLSCTEETA Trigger: TGCAGTTTCTTCGGTGCAGGAAAGAGTTTCCAATCAGACCGGCAATTCATTGGCCACATGAAGAACAGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000628620.1 ENST00000628907.2 |
||
| CDS TCA 72 bp | TTTGTTTCTTTGCACCCTTTGCCTTCTCAGTTCAAGTaGTCCTGGTGCCTCAGCCTCATGAGTAGCTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: FVSLHPLPSQFK*SWCLSLMSSWD Trigger: ATCCCAGCTACTCATGAGGCTGAGGCACCAGGATCACTTGAACTGAGAAGGCAAAGGGTGCAAAGAAACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655478.1 |
||
| CDS TCA 72 bp | AGGCTGAGTCTTCATGTGGCCAATGAATTGCCGGTCTaGTTGGAAACTCTTTCCTGCACCGAAGAAACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RLSLHVANELPV*LETLSCTEETA Trigger: TGCAGTTTCTTCGGTGCAGGAAAGAGTTTCCAATCAGACCGGCAATTCATTGGCCACATGAAGACTCAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655555.1 ENST00000671596.1 |
||
| CDS TCA 72 bp | CCAAACAGGCTTCATGTGGCCAATGAATTGCCGGTCTaGTTGGAAACTCTTTCCTGCACCGAAGAAACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PNRLHVANELPV*LETLSCTEETA Trigger: TGCAGTTTCTTCGGTGCAGGAAAGAGTTTCCAATCAGACCGGCAATTCATTGGCCACATGAAGCCTGTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663043.1 |
||
| CDS TCA 72 bp | TGTGAAGAGACCACCAAACAGGCTTCATGTGGCCAATaGATTGCCGGTCTGATTGGAAACTCTTTCCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: CEETTKQASCGQ*IAGLIGNSFLH Trigger: GTGCAGGAAAGAGTTTCCAATCAGACCGGCAATTCATTGGCCACATGAAGCCTGTTTGGTGGTCTCTTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663043.1 |
||
| CDS TCA 72 bp | AAATGGAGGCAGGTCGAGACCACAGGACCACAGGACTaGGGCGAAATTAAAATTGCTAATGAAGTTTCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: KWRQVETTGPQD*GEIKIANEVSG Trigger: GCCCGAAACTTCATTAGCAATTTTAATTTCGCCTCAGTCCTGTGGTCCTGTGGTCTCGACCTGCCTCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669089.1 |
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| CDS GCA 72 bp | GAAGAGACCACCAAACAGGCTATGTGTGAGCAAAAATaGTGTTTATTTCACCTGGGTGCAGGCAGGCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: EETTKQAMCEQK*CLFHLGAGRLS Trigger: ACTCAGCCTGCCTGCACCCAGGTGAAATAAACAGCATTTTTGCTCACACATAGCCTGTTTGGTGGTCTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000625325.2 ENST00000626230.2 ENST00000648557.1 ENST00000653175.1 ENST00000655020.1 ENST00000655478.1 ENST00000655555.1 ENST00000655854.1 ENST00000655911.1 ENST00000656265.1 ENST00000658893.1 ENST00000662090.1 ENST00000666205.1 ENST00000671596.1 |
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| CDS GCA 72 bp | CCTTACAACTGGCTGTTCTTCATGTGGCCAATGAATTaGCGGTCTGATTGGAAACTCTTTCCTGCACCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PYNWLFFMWPMN*RSDWKLFPAPK Trigger: CTTCGGTGCAGGAAAGAGTTTCCAATCAGACCGGCAATTCATTGGCCACATGAAGAACAGCCAGTTGTAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000628620.1 ENST00000628907.2 |
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| CDS GCA 72 bp | GCCTATTTCGAGGCAGAGACACTGAGTCTGAACGCCTaGGGATGGGTTCTAAAATCTGCTTTGATAGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: AYFEAETLSLNA*GWVLKSALIAK Trigger: CTTTGCTATCAAAGCAGATTTTAGAACCCATCCGCAGGCGTTCAGACTCAGTGTCTCTGCCTCGAAATAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS CCA 72 bp | TTCGAGGCAGAGACACTGAGTCTGAACGCCTGCGGATaGGTTCTAAAATCTGCTTTGATAGCAAAGTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FEAETLSLNACG*VLKSALIAKSS Trigger: TGAGGACTTTGCTATCAAAGCAGATTTTAGAACCCATCCGCAGGCGTTCAGACTCAGTGTCTCTGCCTCGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS CCA 72 bp | TATGTATTAGTCTCTCAAGTGCCATCAATGCAACTCTaGCCCCAAGAGTCAGACCACGCCTGGGAAATTGAC | + |
|
Preference number: 6 (lower is better) Translates to: YVLVSQVPSMQL*PQESDHAWEID Trigger: GTCAATTTCCCAGGCGTGGTCTGACTCTTGGGGCCAGAGTTGCATTGATGGCACTTGAGAGACTAATACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655478.1 |
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| CDS CCA 72 bp | CGGGTGGATCACGAGGTCAAGAGATTCAGACCATCCTaGCCAACATGGGGAAACTCTGTCTTATATCACTTA | + |
|
Preference number: 6 (lower is better) Translates to: RVDHEVKRFRPS*PTWGNSVLYHL Trigger: TAAGTGATATAAGACAGAGTTTCCCCATGTTGGCCAGGATGGTCTGAATCTCTTGACCTCGTGATCCACCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648557.1 |
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| CDS CAA 72 bp | CATCAGCTGTCAACTGTCAGTATAGAGAGACCAGCATaGAAGGAGGAAGCTGTTCTCAGCTATCGTGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: HQLSTVSIERPA*KEEAVLSYRAE Trigger: CTCAGCACGATAGCTGAGAACAGCTTCCTCCTTCAATGCTGGTCTCTCTATACTGACAGTTGACAGCTGATG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000628620.1 ENST00000655478.1 ENST00000655854.1 |
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| CDS CAA 72 bp | CAAATTAGCCTCTGCTTCTGGGCCCTAGAACAGGATTaGAAGCTCTACCTTCTGGGCGATGTCTTCAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QISLCFWALEQD*KLYLLGDVFKS Trigger: AGACTTGAAGACATCGCCCAGAAGGTAGAGCTTCAAATCCTGTTCTAGGGCCCAGAAGCAGAGGCTAATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS TCA 72 bp | TTACCCCTTACAACTGGCTGTTCTTCATGTGGCCAATaGATTGCCGGTCTGATTGGAAACTCTTTCCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LPLTTGCSSCGQ*IAGLIGNSFLH Trigger: GTGCAGGAAAGAGTTTCCAATCAGACCGGCAATTCATTGGCCACATGAAGAACAGCCAGTTGTAAGGGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000628620.1 ENST00000628907.2 |
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| CDS TCA 72 bp | AGGGTATTACACTTTGCTGGACTTGAGGCCTTGCCTTaGACTCTTGAGTTTCTCTGTTCACCAGTGGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: RVLHFAGLEALP*TLEFLCSPVGS Trigger: TGATCCCACTGGTGAACAGAGAAACTCAAGAGTTCAAGGCAAGGCCTCAAGTCCAGCAAAGTGTAATACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS TCA 72 bp | AAAAATGCTGTTTATTTCACCTGGGTGCAGGCAGGCTaGGTCTTCATGTGGCCAATGAATTGCCGGTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: KNAVYFTWVQAG*VFMWPMNCRSD Trigger: ATCAGACCGGCAATTCATTGGCCACATGAAGACTCAGCCTGCCTGCACCCAGGTGAAATAAACAGCATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655555.1 ENST00000671596.1 |
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| CDS GCA 72 bp | ACTGAGTCTGAACGCCTGCGGATGGGTTCTAAAATCTaGTTTGATAGCAAAGTCCTCATGAGATGCTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: TESERLRMGSKI*FDSKVLMRCSH Trigger: GTGAGAGCATCTCATGAGGACTTTGCTATCAAAGCAGATTTTAGAACCCATCCGCAGGCGTTCAGACTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS CCA 72 bp | GTCCATAAAATCTTTACAATCCATGTTCTTCTGCCATaGCTTCAGCCAGTCCCTCTGTTTGGGGTCCCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: VHKIFTIHVLLP*LQPVPLFGVPD Trigger: ATCAGGGACCCCAAACAGAGGGACTGGCTGAAGCCATGGCAGAAGAACATGGATTGTAAAGATTTTATGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000628907.2 ENST00000669089.1 |
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| CDS CCA 72 bp | TATGTATTAGTCTCTCAAGTGCCATCAATGCAACTCTaGCCCCAAGAGTCAGACCACGCCTCTGAATGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: YVLVSQVPSMQL*PQESDHASECS Trigger: TGAACATTCAGAGGCGTGGTCTGACTCTTGGGGCCAGAGTTGCATTGATGGCACTTGAGAGACTAATACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656265.1 ENST00000658893.1 |
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| CDS CAA 72 bp | GAACTCTTGAGTTTCTCTGTTCACCAGTGGGATCAGTaGGTTAGTCCCGATTCCCAAATTAGCCTCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ELLSFSVHQWDQ*VSPDSQISLCF Trigger: GAAGCAGAGGCTAATTTGGGAATCGGGACTAACCAACTGATCCCACTGGTGAACAGAGAAACTCAAGAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS CAA 90 bp | CATTGTGTAGGATTTGAAGTCCTGGTACCCAAAGGCAAAGCATCTTaGTGGGGTGTGTTCCATATCATTAACCCTGGTCATGCATGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: HCVGFEVLVPKGKAS*WGVFHIINPGHAWH Trigger: ATGCCATGCATGACCAGGGTTAATGATATGGAACACACCCCACAAAGATGCTTTGCCTTTGGGTACCAGGACTTCAAATCCTACACAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655020.1 ENST00000655478.1 ENST00000656265.1 ENST00000658893.1 |
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| CDS GCA 72 bp | TTTCAAGGGTATTACACTTTGCTGGACTTGAGGCCTTaGCTTGAACTCTTGAGTTTCTCTGTTCACCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FQGYYTLLDLRP*LELLSFSVHQW Trigger: CCACTGGTGAACAGAGAAACTCAAGAGTTCAAGGCAAGGCCTCAAGTCCAGCAAAGTGTAATACCCTTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS GCA 72 bp | GTTTCTCTATTAGGTTGCTCTTTAGTCACCAGAAGCTaGAGTGTTGGAATCTCCTGGCCAGGTAGAGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VSLLGCSLVTRS*SVGISWPGRVE Trigger: TTCAACTCTACCTGGCCAGGAGATTCCAACACTGCAGCTTCTGGTGACTAAAGAGCAACCTAATAGAGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655478.1 |
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| CDS GCA 72 bp | CAGGAATTTGAGGCTACAGTGAGCTATCAGGGAACCTaGCCCAATAGTCACGTAGGTTCTTTTCTATTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QEFEATVSYQGT*PNSHVGSFLFS Trigger: GGAAAATAGAAAAGAACCTACGTGACTATTGGGGCAGGTTCCCTGATAGCTCACTGTAGCCTCAAATTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669089.1 |
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| CDS CCA 72 bp | CCTCATGAGATGCTCTCACCAAAGCGTGAGATCCAGTaGTCTGTGAAGTCCTATGAAAGAATGGATACAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PHEMLSPKREIQ*SVKSYERMDTR Trigger: TCTTGTATCCATTCTTTCATAGGACTTCACAGACCACTGGATCTCACGCTTTGGTGAGAGCATCTCATGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS CCA 72 bp | TTTGAAGTCCTGGTACCCAAAGGCAAAGCATCTTTGTaGGGTGTGTTCCATATCATTAACCCTGGTCATGCA | + |
|
Preference number: 6 (lower is better) Translates to: FEVLVPKGKASL*GVFHIINPGHA Trigger: TGCATGACCAGGGTTAATGATATGGAACACACCCCACAAAGATGCTTTGCCTTTGGGTACCAGGACTTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000655020.1 ENST00000655478.1 ENST00000656265.1 ENST00000658893.1 |
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| CDS CAA 72 bp | GGATTTGAAGTCCTGGTACCCAAAGGCAAAGCATCTTaGTGGGGTGTGTTCCATATCATTAACCCTGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GFEVLVPKGKAS*WGVFHIINPGH Trigger: ATGACCAGGGTTAATGATATGGAACACACCCCACAAAGATGCTTTGCCTTTGGGTACCAGGACTTCAAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655020.1 ENST00000655478.1 ENST00000656265.1 ENST00000658893.1 |
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| CDS TCA 72 bp | AGATGCTCTCACCAAAGCGTGAGATCCAGTGGTCTGTaGAGTCCTATGAAAGAATGGATACAAGAGAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: RCSHQSVRSSGL*SPMKEWIQEKC Trigger: GCATTTCTCTTGTATCCATTCTTTCATAGGACTTCACAGACCACTGGATCTCACGCTTTGGTGAGAGCATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS GCA 72 bp | GCACCGAAGAAACTGCACCAATTAGCAATATTCATCTaGCAATTCAGCTCTGCAGGTTCAGGCTCATTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: APKKLHQLAIFI*QFSSAGSGSFN Trigger: GTTAAATGAGCCTGAACCTGCAGAGCTGAATTGGCAGATGAATATTGCTAATTGGTGCAGTTTCTTCGGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000625325.2 ENST00000628620.1 ENST00000628907.2 ENST00000655020.1 ENST00000655555.1 ENST00000663043.1 ENST00000668934.1 ENST00000671596.1 |
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| CDS CAA 72 bp | CGGCTCACCGGCAGTCAGAGTTTAAGGTTATCTCTCTaGTTCCCTGAACATTGCTGTTATCCTGTTCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: RLTGSQSLRLSL*FPEHCCYPVLF Trigger: AAAAAGAACAGGATAACAGCAATGTTCAGGGAACAAGAGAGATAACCTTAAACTCTGACTGCCGGTGAGCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669089.1 |
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| CDS TCA 72 bp | ACAATTTGTGCAGTTAACGCAATTACCCCATGGTCCTaGGGCAACATACATCTTCCTCAGCTGATAGGATTA | + |
|
Preference number: 6 (lower is better) Translates to: TICAVNAITPWS*GNIHLPQLIGL Trigger: TAATCCTATCAGCTGAGGAAGATGTATGTTGCCTCAGGACCATGGGGTAATTGCGTTAACTGCACAAATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669089.1 |
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| CDS CCA 72 bp | TCTTTAGTCACCAGAAGCTGCAGTGTTGGAATCTCCTaGCCAGGTAGAGTTGAAAACGTGAATAGTAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: SLVTRSCSVGIS*PGRVENVNSKC Trigger: ACATTTACTATTCACGTTTTCAACTCTACCTGGCCAGGAGATTCCAACACTGCAGCTTCTGGTGACTAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655478.1 |
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| CDS CAA 72 bp | AGTCTCAGCATTCTGTTAGAGAAGCACAAAATGAGCTaGGGCACCTATCTGAAAAGTGGGCAACTTATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLSILLEKHKMS*GTYLKSGQLIQ Trigger: CTGAATAAGTTGCCCACTTTTCAGATAGGTGCCCAAGCTCATTTTGTGCTTCTCTAACAGAATGCTGAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655478.1 |
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| CDS CAA 72 bp | AGACCACAGGACCACAGGACTGAGGCGAAATTAAAATaGCTAATGAAGTTTCGGGCACCATTGTCATTGATA | + |
|
Preference number: 6 (lower is better) Translates to: RPQDHRTEAKLK*LMKFRAPLSLI Trigger: TATCAATGACAATGGTGCCCGAAACTTCATTAGCAATTTTAATTTCGCCTCAGTCCTGTGGTCCTGTGGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669089.1 |
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| CDS TCA 72 bp | TTACTATATTCCCTCCAAGGCTTCACTTCCCTGTTTTaGTGGAGAGATAGCATGTCACCTAGAATAATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLYSLQGFTSLF*WRDSMSPRIMQ Trigger: CTGCATTATTCTAGGTGACATGCTATCTCTCCATCAAAACAGGGAAGTGAAGCCTTGGAGGGAATATAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS CAA 72 bp | AAAACACAAACACAGAAATCTGGAGCACTCTTGTCTTaGTCTCTCCACAACAGGCAGAATCCCAATCTAATC | + |
|
Preference number: 6 (lower is better) Translates to: KTQTQKSGALLS*SLHNRQNPNLI Trigger: GATTAGATTGGGATTCTGCCTGTTGTGGAGAGACAAAGACAAGAGTGCTCCAGATTTCTGTGTTTGTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655478.1 ENST00000655854.1 |
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| CDS CAA 90 bp | AAATTACCCAGTCTCAGCATTCTGTTAGAGAAGCACAAAATGAGCTaGGGCACCTATCTGAAAAGTGGGCAACTTATTCAGTCAGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: KLPSLSILLEKHKMS*GTYLKSGQLIQSEF Trigger: AAATTCTGACTGAATAAGTTGCCCACTTTTCAGATAGGTGCCCAAGCTCATTTTGTGCTTCTCTAACAGAATGCTGAGACTGGGTAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655478.1 |
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| CDS GCA 72 bp | CAAGGTGCCCAGATTTCATATTTGTTCAAACACACATaGTGTACAATTTGTGCAGTTAACGCAATTACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QGAQISYLFKHT*CTICAVNAITP Trigger: TGGGGTAATTGCGTTAACTGCACAAATTGTACAGCATGTGTGTTTGAACAAATATGAAATCTGGGCACCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669089.1 |
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| CDS CAA 72 bp | AAGCTGAGATATTTTAGAACCACATCAGGTGTCACCTaGAGAGAACTTGTTTGGAAACCACTTAGCTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: KLRYFRTTSGVT*RELVWKPLSFP Trigger: AGGAAAGCTAAGTGGTTTCCAAACAAGTTCTCTCAAGGTGACACCTGATGTGGTTCTAAAATATCTCAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655478.1 |
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| CDS CAA 90 bp | TATGAAGTAAAAACACAAACACAGAAATCTGGAGCACTCTTGTCTTaGTCTCTCCACAACAGGCAGAATCCCAATCTAATCTTTTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: YEVKTQTQKSGALLS*SLHNRQNPNLIFCF Trigger: GAAGCAAAAGATTAGATTGGGATTCTGCCTGTTGTGGAGAGACAAAGACAAGAGTGCTCCAGATTTCTGTGTTTGTGTTTTTACTTCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655478.1 ENST00000655854.1 |
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| CDS TCA 72 bp | AGGTTCTTTTCTATTTTCCCTAAGCATCGGCCAGTTTaGGAAATAAAGGGACAGAGTACAGAAGAGAGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: RFFSIFPKHRPV*EIKGQSTEERN Trigger: ATTTCTCTCTTCTGTACTCTGTCCCTTTATTTCTCAAACTGGCCGATGCTTAGGGAAAATAGAAAAGAACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669089.1 |
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| CDS CAA 90 bp | CTGTTTCATTCATTGATGTGTCTATTCTTACATCAATGCCACGTCTaGATTGCTGTAGCTTTACTTGAAATCAGGAAGTGTGAGTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LFHSLMCLFLHQCHV*IAVALLEIRKCESF Trigger: AAAGGACTCACACTTCCTGATTTCAAGTAAAGCTACAGCAATCAAGACGTGGCATTGATGTAAGAATAGACACATCAATGAATGAAACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000626230.2 ENST00000648557.1 ENST00000653175.1 ENST00000655020.1 ENST00000655478.1 ENST00000655555.1 ENST00000655854.1 ENST00000655911.1 ENST00000656265.1 ENST00000658893.1 ENST00000659066.1 ENST00000662090.1 ENST00000663043.1 ENST00000666205.1 ENST00000668934.1 ENST00000671596.1 |
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| CDS GCA 72 bp | GTTGCCATTTATGTTGTTAACTCATTTAAACATCACTaGAACTCACTGAGGAAGGTACTGTTGTTATCATCC | + |
|
Preference number: 6 (lower is better) Translates to: VAIYVVNSFKHH*NSLRKVLLLSS Trigger: GGATGATAACAACAGTACCTTCCTCAGTGAGTTGCAGTGATGTTTAAATGAGTTAACAACATAAATGGCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS CAA 72 bp | TCATTGATGTGTCTATTCTTACATCAATGCCACGTCTaGATTGCTGTAGCTTTACTTGAAATCAGGAAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SLMCLFLHQCHV*IAVALLEIRKC Trigger: ACACTTCCTGATTTCAAGTAAAGCTACAGCAATCAAGACGTGGCATTGATGTAAGAATAGACACATCAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000626230.2 ENST00000648557.1 ENST00000653175.1 ENST00000655020.1 ENST00000655478.1 ENST00000655555.1 ENST00000655854.1 ENST00000655911.1 ENST00000656265.1 ENST00000658893.1 ENST00000659066.1 ENST00000662090.1 ENST00000663043.1 ENST00000666205.1 ENST00000668934.1 ENST00000671596.1 |
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| CDS CAA 72 bp | GTCTCTCCACAACAGGCAGAATCCCAATCTAATCTTTaGCTTCTGTGCAAAATTAGTATATGGGAAGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VSPQQAESQSNL*LLCKISIWEVF Trigger: AAAAACTTCCCATATACTAATTTTGCACAGAAGCAAAAGATTAGATTGGGATTCTGCCTGTTGTGGAGAGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000628620.1 ENST00000655478.1 ENST00000655854.1 |
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| CDS CAA 72 bp | GAACTATCTGAGTGGTTTTCTATTGTTAAATCAGCTTaGCATTCCATGGATAAACTCTCCTTGGTCATGATG | + |
|
Preference number: 6 (lower is better) Translates to: ELSEWFSIVKSA*HSMDKLSLVMM Trigger: CATCATGACCAAGGAGAGTTTATCCATGGAATGCAAAGCTGATTTAACAATAGAAAACCACTCAGATAGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666205.1 |
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| CDS TCA 72 bp | ATGTTGTTAACTCATTTAAACATCACTGCAACTCACTaGGGAAGGTACTGTTGTTATCATCCCCCATTTATA | + |
|
Preference number: 6 (lower is better) Translates to: MLLTHLNITATH*GRYCCYHPPFI Trigger: TATAAATGGGGGATGATAACAACAGTACCTTCCTCAGTGAGTTGCAGTGATGTTTAAATGAGTTAACAACAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654120.1 |
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| CDS CAA 72 bp | GACAGCTCGACAGTTCCTCAAAAATTAAACATAGAATaGACATATGATCCAGTAATTCCGCTCCTAAGTATA | + |
|
Preference number: 6 (lower is better) Translates to: DSSTVPQKLNIE*TYDPVIPLLSI Trigger: TATACTTAGGAGCGGAATTACTGGATCATATGTCAATTCTATGTTTAATTTTTGAGGAACTGTCGAGCTGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 14 transcripts: ENST00000626230.2 ENST00000648557.1 ENST00000653175.1 ENST00000655020.1 ENST00000655478.1 ENST00000655555.1 ENST00000655854.1 ENST00000655911.1 ENST00000656265.1 ENST00000658893.1 ENST00000662090.1 ENST00000663043.1 ENST00000666205.1 ENST00000671596.1 |
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| CDS CAA 72 bp | GCGAAATTAAAATTGCTAATGAAGTTTCGGGCACCATaGTCATTGATAACATCTTATCAAGAGACAGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: AKLKLLMKFRAP*SLITSYQETGF Trigger: AAACCCTGTCTCTTGATAAGATGTTATCAATGACAATGGTGCCCGAAACTTCATTAGCAATTTTAATTTCGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669089.1 |
||
| CDS CAA 72 bp | TCTGTCAATGTAGTGAACTATCTGAGTGGTTTTCTATaGTTAAATCAGCTTTGCATTCCATGGATAAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: SVNVVNYLSGFL*LNQLCIPWINS Trigger: AGAGTTTATCCATGGAATGCAAAGCTGATTTAACAATAGAAAACCACTCAGATAGTTCACTACATTGACAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666205.1 |
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