Pregenerated sensors for LINC00824 (Homo sapiens)
Ensembl gene IDs: ENSG00000254275Ensembl transcript IDs: ENST00000517583.1, ENST00000518044.1, ENST00000520206.5, ENST00000520766.5, ENST00000520824.1, ENST00000523173.5, ENST00000633021.1, ENST00000633038.1, ENST00000633582.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGGACTTCAGGAGCCTGGGGCAGCCCTCAGAAAAGAGAAGCAAGTaGTGGCTGATGGACATGAGAGCACTCTCAGTGAAAGTATGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LDFRSLGQPSEKRSK*WLMDMRALSVKVCR Trigger: CCTGCATACTTTCACTGAGAGTGCTCTCATGTCCATCAGCCAGCACTTGCTTCTCTTTTCTGAGGGCTGCCCCAGGCTCCTGAAGTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS TCA 90 bp | CATTTACTAGACACTGAGGTGCAGACAGGTTCTGGACCAAACTGCTaGCTGGCTGGGCTGGGCTTCCAAGTTCATCAGCTGAGTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HLLDTEVQTGSGPNC*LAGLGFQVHQLSPK Trigger: TTTGGGACTCAGCTGATGAACTTGGAAGCCCAGCCCAGCCAGTCAGCAGTTTGGTCCAGAACCTGTCTGCACCTCAGTGTCTAGTAAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CCA 90 bp | AATTCACCGAGCTGCAGTCATTCTGCTGTCTTGACTAGGGTTGGGTaGTCTAAGATGGCCTTGTCCAGGCAGCTGCTACTGGTTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: NSPSCSHSAVLTRVG*SKMALSRQLLLVLG Trigger: ACCAAGAACCAGTAGCAGCTGCCTGGACAAGGCCATCTTAGACCACCCAACCCTAGTCAAGACAGCAGAATGACTGCAGCTCGGTGAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CCA 90 bp | GACTTCAGGAGCCTGGGGCAGCCCTCAGAAAAGAGAAGCAAGTGCTaGCTGATGGACATGAGAGCACTCTCAGTGAAAGTATGCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: DFRSLGQPSEKRSKC*LMDMRALSVKVCRK Trigger: TTTCCTGCATACTTTCACTGAGAGTGCTCTCATGTCCATCAGCCAGCACTTGCTTCTCTTTTCTGAGGGCTGCCCCAGGCTCCTGAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS GCA 90 bp | TTCAGGGAGGCAAGGGCAGAGGCTAAAAGTCTCCTTCAGCACAGGTaGCTTGTTGCAGAAGGCAGAGTGTCACTTCCACCAAATTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: FREARAEAKSLLQHR*LVAEGRVSLPPNSI Trigger: AATAGAATTTGGTGGAAGTGACACTCTGCCTTCTGCAACAAGGCACCTGTGCTGAAGGAGACTTTTAGCCTCTGCCCTTGCCTCCCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517583.1 ENST00000520206.5 |
||
| CDS CCA 90 bp | CAAGACCATCTTGTTCCAACACTGTCCATACCCCTTCATATGTGCTaGGGGGTGAGAGGAGAAGGGTCCATGCATGCCCTATTCATAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QDHLVPTLSIPLHMC*GVRGEGSMHALFIE Trigger: TTCTATGAATAGGGCATGCATGGACCCTTCTCCTCTCACCCCCCAGCACATATGAAGGGGTATGGACAGTGTTGGAACAAGATGGTCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000523173.5 ENST00000633582.1 |
||
| CDS TCA 90 bp | GTTCATCAGCTGAGTCCCAAATCCACGCCATTTCCACATGGCCCTTaGGTTTCCATCAGAGACAAGTGGGGAAGTTATCTTTGCATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VHQLSPKSTPFPHGP*VSIRDKWGSYLCMC Trigger: ACACATGCAAAGATAACTTCCCCACTTGTCTCTGATGGAAACTCAAGGGCCATGTGGAAATGGCGTGGATTTGGGACTCAGCTGATGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CCA 90 bp | CTTCCAAGTTCATCAGCTGAGTCCCAAATCCACGCCATTTCCACATaGCCCTTGAGTTTCCATCAGAGACAAGTGGGGAAGTTATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPSSSAESQIHAIST*PLSFHQRQVGKLSL Trigger: CAAAGATAACTTCCCCACTTGTCTCTGATGGAAACTCAAGGGCCATGTGGAAATGGCGTGGATTTGGGACTCAGCTGATGAACTTGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CCA 90 bp | GGTCATTCCAGGGAGCACCACCTCGCTTCCTCCTCTGTGCTGTTGTaGTTGTTGGAATCTAAGTCAGTTGTGACACATCTTATTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GHSREHHLASSSVLL*LLESKSVVTHLIFL Trigger: CAGAAAAATAAGATGTGTCACAACTGACTTAGATTCCAACAACCACAACAGCACAGAGGAGGAAGCGAGGTGGTGCTCCCTGGAATGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000520824.1 ENST00000523173.5 ENST00000633021.1 ENST00000633582.1 |
||
| CDS TCA 90 bp | GGAAGAAAGGCAATCAAGGGTACAATGCACTTATTACAAACACCGTaGAGAAAACCAGCAAGGAAAGTCCTGCAGGTGAGCACTGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRKAIKGTMHLLQTP*RKPARKVLQVSTAD Trigger: GTCTGCAGTGCTCACCTGCAGGACTTTCCTTGCTGGTTTTCTTCACGGTGTTTGTAATAAGTGCATTGTACCCTTGATTGCCTTTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS TCA 90 bp | CGTGTTACAGCTCTTCCTTTATGGTGCTACCTGAGTGGCCTTTGTTaGATACAACTGAGCTTTGTCTTCCCTGCGGCCTCTTTAGTACAA | + |
|
Preference number: 5 (lower is better) Translates to: RVTALPLWCYLSGLC*IQLSFVFPAASLVQ Trigger: TTGTACTAAAGAGGCCGCAGGGAAGACAAAGCTCAGTTGTATTCAACAAAGGCCACTCAGGTAGCACCATAAAGGAAGAGCTGTAACACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520824.1 ENST00000633021.1 |
||
| CDS CCA 90 bp | GCCATTGTGCTCTGTGATGGCCAATGTAGTAGCATCGTGGAAAAATaGCCCTGTGTAGAAAGGATAATTCTTCTTCGTGGTTGCAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AIVLCDGQCSSIVEK*PCVERIILLRGCSG Trigger: TCCACTGCAACCACGAAGAAGAATTATCCTTTCTACACAGGGCCATTTTTCCACGATGCTACTACATTGGCCATCACAGAGCACAATGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000518044.1 ENST00000633038.1 |
||
| CDS TCA 90 bp | TTTTGTGTCTGCAGCTTCTTGCCAGAGAGGCTCTATCTGATTTTCTaGTGCAAGAAGCTGCAAGCTTCTTTCTCTGCCACAATGTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: FCVCSFLPERLYLIF*CKKLQASFSATMSS Trigger: GGATGACATTGTGGCAGAGAAAGAAGCTTGCAGCTTCTTGCATCAGAAAATCAGATAGAGCCTCTCTGGCAAGAAGCTGCAGACACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520766.5 |
||
| CDS TCA 90 bp | CAAGCTTCTTTTGTGTCTGCAGCTTCTTGCCAGAGAGGCTCTATCTaGTTTTCTGATGCAAGAAGCTGCAAGCTTCTTTCTCTGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: QASFVSAASCQRGSI*FSDARSCKLLSLPQ Trigger: TTGTGGCAGAGAAAGAAGCTTGCAGCTTCTTGCATCAGAAAATCAGATAGAGCCTCTCTGGCAAGAAGCTGCAGACACAAAAGAAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520766.5 |
||
| CDS GCA 90 bp | GGAGAAGTAGGACAGGGCAAGGAAGAAAGGCAATCAAGGGTACAATaGACTTATTACAAACACCGTGAAGAAAACCAGCAAGGAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GEVGQGKEERQSRVQ*TYYKHREENQQGKS Trigger: GGACTTTCCTTGCTGGTTTTCTTCACGGTGTTTGTAATAAGTGCATTGTACCCTTGATTGCCTTTCTTCCTTGCCCTGTCCTACTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CCA 90 bp | TGCAAGAAGCTGCAAGCTTCTTTCTCTGCCACAATGTCATCCTGTTaGCTGGCTCCATCCATAAAGTTCAACAAACCAGTTCAACCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CKKLQASFSATMSSC*LAPSIKFNKPVQPL Trigger: AAGAGGTTGAACTGGTTTGTTGAACTTTATGGATGGAGCCAGCCAACAGGATGACATTGTGGCAGAGAAAGAAGCTTGCAGCTTCTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520766.5 |
||
| CDS TCA 90 bp | CAGATTAAGCAGGTCATTGTGGAAGGTGTTTGGATTGTTGAGATGTaGGAGTATCCAATAAGCAGTATCCATCATCATCAAGATCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QIKQVIVEGVWIVEM*EYPISSIHHHQDRG Trigger: GCCTCGATCTTGATGATGATGGATACTGCTTATTGGATACTCTCACATCTCAACAATCCAAACACCTTCCACAATGACCTGCTTAATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517583.1 ENST00000520206.5 |
||
| CDS CCA 90 bp | CATCGTGGAAAAATGGCCCTGTGTAGAAAGGATAATTCTTCTTCGTaGTTGCAGTGGATCTGTCTTCGAGAGATCGTGCCAATTAAATTA | + |
|
Preference number: 5 (lower is better) Translates to: HRGKMALCRKDNSSS*LQWICLREIVPIKL Trigger: TAATTTAATTGGCACGATCTCTCGAAGACAGATCCACTGCAACCACGAAGAAGAATTATCCTTTCTACACAGGGCCATTTTTCCACGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000518044.1 ENST00000633038.1 |
||
| CDS CCA 90 bp | TCAGTGAAAGTATGCAGGAAAATGATAAAAGGATCCAAAGAAATATaGATGAGACCCTCTTCCCGGCACTCTCTTAAGGTGAAGTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SVKVCRKMIKGSKEI*MRPSSRHSLKVKWK Trigger: TTTCCACTTCACCTTAAGAGAGTGCCGGGAAGAGGGTCTCATCCATATTTCTTTGGATCCTTTTATCATTTTCCTGCATACTTTCACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CCA 90 bp | AAAATGGCCCTGTGTAGAAAGGATAATTCTTCTTCGTGGTTGCAGTaGATCTGTCTTCGAGAGATCGTGCCAATTAAATTAACACGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KMALCRKDNSSSWLQ*ICLREIVPIKLTRL Trigger: TAAACGTGTTAATTTAATTGGCACGATCTCTCGAAGACAGATCCACTGCAACCACGAAGAAGAATTATCCTTTCTACACAGGGCCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518044.1 ENST00000633038.1 |
||
| CDS GCA 90 bp | AAGGGAGTTAAACCATTTGACAGGTGGAAAGAGGAATGTATTTTATaGATAAGGAATAACATGCAAAGTCTCAGGGTGGAAAAGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: KGVKPFDRWKEECIL*IRNNMQSLRVEKSM Trigger: CATTGACTTTTCCACCCTGAGACTTTGCATGTTATTCCTTATGCATAAAATACATTCCTCTTTCCACCTGTCAAATGGTTTAACTCCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS GCA 72 bp | AGGCAGGAGAATGGCATGAATCTGGGAGGCGGAGCTTaGAGTGAGCCGAGATCCGCCACCGTACTCCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RQENGMNLGGGA*SEPRSATVLQP Trigger: AGGCTGGAGTACGGTGGCGGATCTCGGCTCACTGCAAGCTCCGCCTCCCAGATTCATGCCATTCTCCTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520766.5 |
||
| CDS TCA 72 bp | GACACTGAGGTGCAGACAGGTTCTGGACCAAACTGCTaGCTGGCTGGGCTGGGCTTCCAAGTTCATCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DTEVQTGSGPNC*LAGLGFQVHQL Trigger: CAGCTGATGAACTTGGAAGCCCAGCCCAGCCAGTCAGCAGTTTGGTCCAGAACCTGTCTGCACCTCAGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CCA 72 bp | GGTGCAGACAGGTTCTGGACCAAACTGCTGACTGGCTaGGCTGGGCTTCCAAGTTCATCAGCTGAGTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GADRFWTKLLTG*AGLPSSSAESQ Trigger: TTGGGACTCAGCTGATGAACTTGGAAGCCCAGCCCAGCCAGTCAGCAGTTTGGTCCAGAACCTGTCTGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS TCA 72 bp | GCCACCGCGCCCAGCCAGCCTTTCATCTTTGACCTTTaGAATTCCCTCTTGACTGATTCCACTACTCCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: ATAPSQPFIFDL*NSLLTDSTTPV Trigger: CACGGGAGTAGTGGAATCAGTCAAGAGGGAATTTCAAAGGTCAAAGATGAAAGGCTGGCTGGGCGCGGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520824.1 ENST00000633021.1 |
||
| CDS GCA 72 bp | GCAAGGGCAGAGGCTAAAAGTCTCCTTCAGCACAGGTaGCTTGTTGCAGAAGGCAGAGTGTCACTTCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: ARAEAKSLLQHR*LVAEGRVSLPP Trigger: TGGTGGAAGTGACACTCTGCCTTCTGCAACAAGGCACCTGTGCTGAAGGAGACTTTTAGCCTCTGCCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517583.1 ENST00000520206.5 |
||
| CDS GCA 72 bp | AGGAGCCTGGGGCAGCCCTCAGAAAAGAGAAGCAAGTaGTGGCTGATGGACATGAGAGCACTCTCAGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RSLGQPSEKRSK*WLMDMRALSVK Trigger: TTTCACTGAGAGTGCTCTCATGTCCATCAGCCAGCACTTGCTTCTCTTTTCTGAGGGCTGCCCCAGGCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CCA 72 bp | GATGGCCTTGTCCAGGCAGCTGCTACTGGTTCTTGGTaGAGCCATGTCTCCAGTAGGTTAGCTTGGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: DGLVQAAATGSW*SHVSSRLAWSS Trigger: AGAAGACCAAGCTAACCTACTGGAGACATGGCTCCACCAAGAACCAGTAGCAGCTGCCTGGACAAGGCCATC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CCA 72 bp | AGCTGCAGTCATTCTGCTGTCTTGACTAGGGTTGGGTaGTCTAAGATGGCCTTGTCCAGGCAGCTGCTACTG | + |
|
Preference number: 6 (lower is better) Translates to: SCSHSAVLTRVG*SKMALSRQLLL Trigger: CAGTAGCAGCTGCCTGGACAAGGCCATCTTAGACCACCCAACCCTAGTCAAGACAGCAGAATGACTGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CAA 90 bp | GGGAGGCAAGGGCAGAGGCTAAAAGTCTCCTTCAGCACAGGTGCCTaGTTGCAGAAGGCAGAGTGTCACTTCCACCAAATTCTATTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GRQGQRLKVSFSTGA*LQKAECHFHQILLV Trigger: TACCAATAGAATTTGGTGGAAGTGACACTCTGCCTTCTGCAACAAGGCACCTGTGCTGAAGGAGACTTTTAGCCTCTGCCCTTGCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517583.1 ENST00000520206.5 |
||
| CDS CAA 90 bp | AGCAGCTTAAAACACAATTCACCGAGCTGCAGTCATTCTGCTGTCTaGACTAGGGTTGGGTGGTCTAAGATGGCCTTGTCCAGGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSLKHNSPSCSHSAV*TRVGWSKMALSRQL Trigger: CAGCTGCCTGGACAAGGCCATCTTAGACCACCCAACCCTAGTCAAGACAGCAGAATGACTGCAGCTCGGTGAATTGTGTTTTAAGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CAA 72 bp | GGGCAGAGGCTAAAAGTCTCCTTCAGCACAGGTGCCTaGTTGCAGAAGGCAGAGTGTCACTTCCACCAAATT | + |
|
Preference number: 6 (lower is better) Translates to: GQRLKVSFSTGA*LQKAECHFHQI Trigger: AATTTGGTGGAAGTGACACTCTGCCTTCTGCAACAAGGCACCTGTGCTGAAGGAGACTTTTAGCCTCTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517583.1 ENST00000520206.5 |
||
| CDS CAA 72 bp | TCCAGGGAGCACCACCTCGCTTCCTCCTCTGTGCTGTaGTGGTTGTTGGAATCTAAGTCAGTTGTGACACAT | + |
|
Preference number: 6 (lower is better) Translates to: SREHHLASSSVL*WLLESKSVVTH Trigger: ATGTGTCACAACTGACTTAGATTCCAACAACCACAACAGCACAGAGGAGGAAGCGAGGTGGTGCTCCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520824.1 ENST00000523173.5 ENST00000633021.1 ENST00000633582.1 |
||
| CDS TCA 72 bp | AACACAATTCACCGAGCTGCAGTCATTCTGCTGTCTTaGCTAGGGTTGGGTGGTCTAAGATGGCCTTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: NTIHRAAVILLS*LGLGGLRWPCP Trigger: TGGACAAGGCCATCTTAGACCACCCAACCCTAGTCAAGACAGCAGAATGACTGCAGCTCGGTGAATTGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS TCA 72 bp | GCTCTTCCTTTATGGTGCTACCTGAGTGGCCTTTGTTaGATACAACTGAGCTTTGTCTTCCCTGCGGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ALPLWCYLSGLC*IQLSFVFPAAS Trigger: AGAGGCCGCAGGGAAGACAAAGCTCAGTTGTATTCAACAAAGGCCACTCAGGTAGCACCATAAAGGAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520824.1 ENST00000633021.1 |
||
| CDS CCA 72 bp | AGGGAGCACCACCTCGCTTCCTCCTCTGTGCTGTTGTaGTTGTTGGAATCTAAGTCAGTTGTGACACATCTT | + |
|
Preference number: 6 (lower is better) Translates to: REHHLASSSVLL*LLESKSVVTHL Trigger: AAGATGTGTCACAACTGACTTAGATTCCAACAACCACAACAGCACAGAGGAGGAAGCGAGGTGGTGCTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520824.1 ENST00000523173.5 ENST00000633021.1 ENST00000633582.1 |
||
| CDS CAA 72 bp | GCTGAGTCCCAAATCCACGCCATTTCCACATGGCCCTaGAGTTTCCATCAGAGACAAGTGGGGAAGTTATCT | + |
|
Preference number: 6 (lower is better) Translates to: AESQIHAISTWP*SFHQRQVGKLS Trigger: AGATAACTTCCCCACTTGTCTCTGATGGAAACTCAAGGGCCATGTGGAAATGGCGTGGATTTGGGACTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CAA 72 bp | AAACACAATTCACCGAGCTGCAGTCATTCTGCTGTCTaGACTAGGGTTGGGTGGTCTAAGATGGCCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KHNSPSCSHSAV*TRVGWSKMALS Trigger: GGACAAGGCCATCTTAGACCACCCAACCCTAGTCAAGACAGCAGAATGACTGCAGCTCGGTGAATTGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS TCA 72 bp | CTGAGTCCCAAATCCACGCCATTTCCACATGGCCCTTaGGTTTCCATCAGAGACAAGTGGGGAAGTTATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSPKSTPFPHGP*VSIRDKWGSYL Trigger: AAGATAACTTCCCCACTTGTCTCTGATGGAAACTCAAGGGCCATGTGGAAATGGCGTGGATTTGGGACTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS TCA 72 bp | TTCATCTCCTTCTCCCTTCCTCCATTTACTAGACACTaGGGTGCAGACAGGTTCTGGACCAAACTGCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: FISFSLPPFTRH*GADRFWTKLLT Trigger: AGTCAGCAGTTTGGTCCAGAACCTGTCTGCACCTCAGTGTCTAGTAAATGGAGGAAGGGAGAAGGAGATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CAA 72 bp | GGTAAACTGCTAGTCCTTCAAGAGCAAGCTCAGATATaGTTGTGTTTGGGTCATTCCAGGGAGCACCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: GKLLVLQEQAQI*LCLGHSREHHL Trigger: GAGGTGGTGCTCCCTGGAATGACCCAAACACAACAATATCTGAGCTTGCTCTTGAAGGACTAGCAGTTTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520824.1 ENST00000523173.5 ENST00000633021.1 ENST00000633582.1 |
||
| CDS CAA 90 bp | AGTTCATCAGCTGAGTCCCAAATCCACGCCATTTCCACATGGCCCTaGAGTTTCCATCAGAGACAAGTGGGGAAGTTATCTTTGCATGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSAESQIHAISTWP*SFHQRQVGKLSLHV Trigger: CACATGCAAAGATAACTTCCCCACTTGTCTCTGATGGAAACTCAAGGGCCATGTGGAAATGGCGTGGATTTGGGACTCAGCTGATGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CAA 90 bp | CCGTGTTACAGCTCTTCCTTTATGGTGCTACCTGAGTGGCCTTTGTaGAATACAACTGAGCTTTGTCTTCCCTGCGGCCTCTTTAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: PCYSSSFMVLPEWPL*NTTELCLPCGLFST Trigger: TGTACTAAAGAGGCCGCAGGGAAGACAAAGCTCAGTTGTATTCAACAAAGGCCACTCAGGTAGCACCATAAAGGAAGAGCTGTAACACGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520824.1 ENST00000633021.1 |
||
| CDS CAA 90 bp | TGTCCGTGTTACAGCTCTTCCTTTATGGTGCTACCTGAGTGGCCTTaGTTGAATACAACTGAGCTTTGTCTTCCCTGCGGCCTCTTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: CPCYSSSFMVLPEWP*LNTTELCLPCGLFS Trigger: ACTAAAGAGGCCGCAGGGAAGACAAAGCTCAGTTGTATTCAACAAAGGCCACTCAGGTAGCACCATAAAGGAAGAGCTGTAACACGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520824.1 ENST00000633021.1 |
||
| CDS CAA 90 bp | TTGGGTCATTCCAGGGAGCACCACCTCGCTTCCTCCTCTGTGCTGTaGTGGTTGTTGGAATCTAAGTCAGTTGTGACACATCTTATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LGHSREHHLASSSVL*WLLESKSVVTHLIF Trigger: AAAAATAAGATGTGTCACAACTGACTTAGATTCCAACAACCACAACAGCACAGAGGAGGAAGCGAGGTGGTGCTCCCTGGAATGACCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000520824.1 ENST00000523173.5 ENST00000633021.1 ENST00000633582.1 |
||
| CDS TCA 72 bp | GAAGGGTCCATGCATGCCCTATTCATAGAAGGCTTTTaGAGCCTGTTGCTGGTCTTTGAATTCTCCATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: EGSMHALFIEGF*SLLLVFEFSMV Trigger: GACCATGGAGAATTCAAAGACCAGCAACAGGCTTCAAAAGCCTTCTATGAATAGGGCATGCATGGACCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000523173.5 ENST00000633582.1 |
||
| CDS CAA 72 bp | ACTCTTCTCCAAATGGTGATTCAAGGATGGAGCCTCTaGCCATTTTGCATTCCTGCCGTCAAGGTAAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: TLLQMVIQGWSL*PFCIPAVKVRL Trigger: CAGTCTTACCTTGACGGCAGGAATGCAAAATGGCAAGAGGCTCCATCCTTGAATCACCATTTGGAGAAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CAA 72 bp | GCTGCAAGCTTCTTTCTCTGCCACAATGTCATCCTGTaGGCTGGCTCCATCCATAAAGTTCAACAAACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AASFFLCHNVIL*AGSIHKVQQTS Trigger: ACTGGTTTGTTGAACTTTATGGATGGAGCCAGCCAACAGGATGACATTGTGGCAGAGAAAGAAGCTTGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520766.5 |
||
| CDS CAA 72 bp | ACTCTTCTCCAAATGGTGATTCAAGGATGGAGCCTCTaGCCATTTTGCATTCCTGCCGTCTTCAATGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TLLQMVIQGWSL*PFCIPAVFNAS Trigger: GCTTGCATTGAAGACGGCAGGAATGCAAAATGGCAAGAGGCTCCATCCTTGAATCACCATTTGGAGAAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520766.5 |
||
| CDS CAA 90 bp | ATGCAAGAAGCTGCAAGCTTCTTTCTCTGCCACAATGTCATCCTGTaGGCTGGCTCCATCCATAAAGTTCAACAAACCAGTTCAACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: MQEAASFFLCHNVIL*AGSIHKVQQTSSTS Trigger: AGAGGTTGAACTGGTTTGTTGAACTTTATGGATGGAGCCAGCCAACAGGATGACATTGTGGCAGAGAAAGAAGCTTGCAGCTTCTTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520766.5 |
||
| CDS TCA 72 bp | CACTGCAGACAGGGAGATCACACATTAGTGTTTTCCTaGTCAGGGAACAAGGGAGCTAGAGTGTTTACAGTT | + |
|
Preference number: 6 (lower is better) Translates to: HCRQGDHTLVFS*SGNKGARVFTV Trigger: AACTGTAAACACTCTAGCTCCCTTGTTCCCTGATCAGGAAAACACTAATGTGTGATCTCCCTGTCTGCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS GCA 72 bp | TGGCCCTGTGTAGAAAGGATAATTCTTCTTCGTGGTTaGAGTGGATCTGTCTTCGAGAGATCGTGCCAATTA | + |
|
Preference number: 6 (lower is better) Translates to: WPCVERIILLRG*SGSVFERSCQL Trigger: TAATTGGCACGATCTCTCGAAGACAGATCCACTGCAACCACGAAGAAGAATTATCCTTTCTACACAGGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518044.1 ENST00000633038.1 |
||
| CDS GCA 72 bp | CAAATGGTGATTCAAGGATGGAGCCTCTTGCCATTTTaGATTCCTGCCGTCAAGGTAAGACTGGATGAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: QMVIQGWSLLPF*IPAVKVRLDEN Trigger: ATTCTCATCCAGTCTTACCTTGACGGCAGGAATGCAAAATGGCAAGAGGCTCCATCCTTGAATCACCATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CCA 72 bp | CTGCAAGCTTCTTTCTCTGCCACAATGTCATCCTGTTaGCTGGCTCCATCCATAAAGTTCAACAAACCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LQASFSATMSSC*LAPSIKFNKPV Trigger: AACTGGTTTGTTGAACTTTATGGATGGAGCCAGCCAACAGGATGACATTGTGGCAGAGAAAGAAGCTTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520766.5 |
||
| CDS CAA 72 bp | ATGGCCCTGTGTAGAAAGGATAATTCTTCTTCGTGGTaGCAGTGGATCTGTCTTCGAGAGATCGTGCCAATT | + |
|
Preference number: 6 (lower is better) Translates to: MALCRKDNSSSW*QWICLREIVPI Trigger: AATTGGCACGATCTCTCGAAGACAGATCCACTGCAACCACGAAGAAGAATTATCCTTTCTACACAGGGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518044.1 ENST00000633038.1 |
||
| CDS CAA 72 bp | CCAAATGGTGATTCAAGGATGGAGCCTCTTGCCATTTaGCATTCCTGCCGTCTTCAATGCAAGCTTCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: PNGDSRMEPLAI*HSCRLQCKLLL Trigger: CAAAAGAAGCTTGCATTGAAGACGGCAGGAATGCAAAATGGCAAGAGGCTCCATCCTTGAATCACCATTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520766.5 |
||
| CDS CAA 90 bp | TGTCAGTTAACTCTTCTCCAAATGGTGATTCAAGGATGGAGCCTCTaGCCATTTTGCATTCCTGCCGTCAAGGTAAGACTGGATGAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: CQLTLLQMVIQGWSL*PFCIPAVKVRLDEN Trigger: ATTCTCATCCAGTCTTACCTTGACGGCAGGAATGCAAAATGGCAAGAGGCTCCATCCTTGAATCACCATTTGGAGAAGAGTTAACTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CAA 90 bp | TCCTATCCTGGCTCCCTGTGGCATATAATTCAGTGCAGATCTTGTTaGTCAGTTAACTCTTCTCCAAATGGTGATTCAAGGATGGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SYPGSLWHIIQCRSC*SVNSSPNGDSRMEP Trigger: AGGCTCCATCCTTGAATCACCATTTGGAGAAGAGTTAACTGACAAACAAGATCTGCACTGAATTATATGCCACAGGGAGCCAGGATAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS TCA 72 bp | GAAGATCAGAAAGGCTGGAGCCTAAAGTCGGGAGGGTaGAAGGGTATTTCAGTTATGTATTGCTGCCTAATA | + |
|
Preference number: 6 (lower is better) Translates to: EDQKGWSLKSGG*KGISVMYCCLI Trigger: TATTAGGCAGCAATACATAACTGAAATACCCTTTCACCCTCCCGACTTTAGGCTCCAGCCTTTCTGATCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS GCA 72 bp | GTTATCACCCCGTTCCTTAGCAAATGGCTAAGGCTATaGAAGTTCCCAGCCTTTAGCTCTCTATGTTTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VITPFLSKWLRL*KFPAFSSLCFH Trigger: ATGAAAACATAGAGAGCTAAAGGCTGGGAACTTGCATAGCCTTAGCCATTTGCTAAGGAACGGGGTGATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS GCA 72 bp | GGACAGGGCAAGGAAGAAAGGCAATCAAGGGTACAATaGACTTATTACAAACACCGTGAAGAAAACCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GQGKEERQSRVQ*TYYKHREENQQ Trigger: TTGCTGGTTTTCTTCACGGTGTTTGTAATAAGTGCATTGTACCCTTGATTGCCTTTCTTCCTTGCCCTGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS GCA 72 bp | CAAATGGTGATTCAAGGATGGAGCCTCTTGCCATTTTaGATTCCTGCCGTCTTCAATGCAAGCTTCTTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: QMVIQGWSLLPF*IPAVFNASFFC Trigger: ACAAAAGAAGCTTGCATTGAAGACGGCAGGAATGCAAAATGGCAAGAGGCTCCATCCTTGAATCACCATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520766.5 |
||
| CDS CAA 90 bp | TGTCAGTTAACTCTTCTCCAAATGGTGATTCAAGGATGGAGCCTCTaGCCATTTTGCATTCCTGCCGTCTTCAATGCAAGCTTCTTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CQLTLLQMVIQGWSL*PFCIPAVFNASFFC Trigger: ACAAAAGAAGCTTGCATTGAAGACGGCAGGAATGCAAAATGGCAAGAGGCTCCATCCTTGAATCACCATTTGGAGAAGAGTTAACTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520766.5 |
||
| CDS TCA 72 bp | TTCCAAAACTTCTGTTCTAGCTTATTGTCACTCTCATaGGATTTGGTGCCATGTCCTCCCATGGATAACCCT | + |
|
Preference number: 6 (lower is better) Translates to: FQNFCSSLLSLS*DLVPCPPMDNP Trigger: AGGGTTATCCATGGGAGGACATGGCACCAAATCTCATGAGAGTGACAATAAGCTAGAACAGAAGTTTTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517583.1 |
||
| CDS TCA 72 bp | AGCAAATCCTTACATGCCCTATTCATAGAAGGCTTTTaGAGCCTGTTGCTGGTCTTTGAATTCTCCATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SKSLHALFIEGF*SLLLVFEFSMV Trigger: GACCATGGAGAATTCAAAGACCAGCAACAGGCTTCAAAAGCCTTCTATGAATAGGGCATGTAAGGATTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520824.1 ENST00000633021.1 |
||
| CDS CCA 72 bp | GGAATAACATGCAAAGTCTCAGGGTGGAAAAGTCAATaGCATGTTCCAAGGCTTAAGAGAAGATCAGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GITCKVSGWKSQ*HVPRLKRRSER Trigger: CCTTTCTGATCTTCTCTTAAGCCTTGGAACATGCCATTGACTTTTCCACCCTGAGACTTTGCATGTTATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CCA 72 bp | GTATGCAGGAAAATGATAAAAGGATCCAAAGAAATATaGATGAGACCCTCTTCCCGGCACTCTCTTAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VCRKMIKGSKEI*MRPSSRHSLKV Trigger: CACCTTAAGAGAGTGCCGGGAAGAGGGTCTCATCCATATTTCTTTGGATCCTTTTATCATTTTCCTGCATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CAA 72 bp | GGCTCCCTGTGGCATATAATTCAGTGCAGATCTTGTTaGTCAGTTAACTCTTCTCCAAATGGTGATTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSLWHIIQCRSC*SVNSSPNGDSR Trigger: CCTTGAATCACCATTTGGAGAAGAGTTAACTGACAAACAAGATCTGCACTGAATTATATGCCACAGGGAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520206.5 |
||
| CDS CAA 90 bp | CGTGGAAAAATGGCCCTGTGTAGAAAGGATAATTCTTCTTCGTGGTaGCAGTGGATCTGTCTTCGAGAGATCGTGCCAATTAAATTAACA | + |
|
Preference number: 6 (lower is better) Translates to: RGKMALCRKDNSSSW*QWICLREIVPIKLT Trigger: TGTTAATTTAATTGGCACGATCTCTCGAAGACAGATCCACTGCAACCACGAAGAAGAATTATCCTTTCTACACAGGGCCATTTTTCCACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000518044.1 ENST00000633038.1 |
||
| CDS TCA 72 bp | AATAAGCAGTATCCATCATCATCAAGATCGAGGCACTaGCCAGTCCTTCTGATGACTAGACACATTATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: NKQYPSSSRSRH*PVLLMTRHIIL Trigger: CAAGATAATGTGTCTAGTCATCAGAAGGACTGGTCAGTGCCTCGATCTTGATGATGATGGATACTGCTTATT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517583.1 ENST00000520206.5 |
||
| CDS GCA 72 bp | GATTTTGAAATTGAGTTTGGAGGCAAAGTGGTCTTGTaGATGTTTTTCAGGCAGATCCACACTATGCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: DFEIEFGGKVVL*MFFRQIHTMPS Trigger: AGATGGCATAGTGTGGATCTGCCTGAAAAACATGCACAAGACCACTTTGCCTCCAAACTCAATTTCAAAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517583.1 |
||
| CDS CAA 90 bp | GTTGGCTGTCAATGTTCAGAACATATAATTCAGTGCAGATCTTGTTaGTCAGTTAACTCTTCTCCAAATGGTGATTCAAGGATGGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VGCQCSEHIIQCRSC*SVNSSPNGDSRMEP Trigger: AGGCTCCATCCTTGAATCACCATTTGGAGAAGAGTTAACTGACAAACAAGATCTGCACTGAATTATATGTTCTGAACATTGACAGCCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520766.5 |
||
| CDS TCA 72 bp | CAGGTCATTGTGGAAGGTGTTTGGATTGTTGAGATGTaGGAGTATCCAATAAGCAGTATCCATCATCATCAA | + |
|
Preference number: 6 (lower is better) Translates to: QVIVEGVWIVEM*EYPISSIHHHQ Trigger: TTGATGATGATGGATACTGCTTATTGGATACTCTCACATCTCAACAATCCAAACACCTTCCACAATGACCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517583.1 ENST00000520206.5 |
||
| CDS CCA 72 bp | CTGTGTAGAAAGGATAATTCTTCTTCGTGGTTGCAGTaGATCTGTCTTCGAGAGATCGTGCCAATTAAATTA | + |
|
Preference number: 6 (lower is better) Translates to: LCRKDNSSSWLQ*ICLREIVPIKL Trigger: TAATTTAATTGGCACGATCTCTCGAAGACAGATCCACTGCAACCACGAAGAAGAATTATCCTTTCTACACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518044.1 ENST00000633038.1 |
||
| CDS CAA 72 bp | GATTCAAAAGCTGTACACTTCAGAATCTCATCAGAGTaGTCTCTCATTAGAGCTGATGTTGGCTGTCAATGT | + |
|
Preference number: 6 (lower is better) Translates to: DSKAVHFRISSE*SLIRADVGCQC Trigger: ACATTGACAGCCAACATCAGCTCTAATGAGAGACAACTCTGATGAGATTCTGAAGTGTACAGCTTTTGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520766.5 |
||
| CDS TCA 72 bp | TTCTCCATGGTCTTTTCTGGATCTCTTTGTGCTTCTTaGTATCTAGACCTGGACTCAATTTCTGTTTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: FSMVFSGSLCAS*YLDLDSISVFH Trigger: ATGGAAAACAGAAATTGAGTCCAGGTCTAGATATCAAGAAGCACAAAGAGATCCAGAAAAGACCATGGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000520824.1 ENST00000523173.5 ENST00000633021.1 ENST00000633582.1 |
||
| CDS CAA 72 bp | CAATGTTCAGAACATATAATTCAGTGCAGATCTTGTTaGTCAGTTAACTCTTCTCCAAATGGTGATTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: QCSEHIIQCRSC*SVNSSPNGDSR Trigger: CCTTGAATCACCATTTGGAGAAGAGTTAACTGACAAACAAGATCTGCACTGAATTATATGTTCTGAACATTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520766.5 |
||