Pregenerated sensors for LINC00705 (Homo sapiens)
Ensembl gene IDs: ENSG00000225269Ensembl transcript IDs: ENST00000417883.2, ENST00000653457.1, ENST00000654260.1, ENST00000654330.1, ENST00000656425.1, ENST00000661397.1, ENST00000663142.1, ENST00000665287.1, ENST00000668784.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGATGCAGGCGCTGTGCTGTGTTCCTCATGGGGCTCCTGGCAGATaGCTTGGGAGAGGGGCTTGTGTGCCTGTAAAGCCGTCTCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: LMQALCCVPHGAPGR*LGRGACVPVKPSPG Trigger: CCCCGGAGACGGCTTTACAGGCACACAAGCCCCTCTCCCAAGCCATCTGCCAGGAGCCCCATGAGGAACACAGCACAGCGCCTGCATCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CCA 90 bp | TGGGCTTCTGATGCAGGCGCTGTGCTGTGTTCCTCATGGGGCTCCTaGCAGATGGCTTGGGAGAGGGGCTTGTGTGCCTGTAAAGCCGTC | + |
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Preference number: 5 (lower is better) Translates to: WASDAGAVLCSSWGS*QMAWERGLCACKAV Trigger: GACGGCTTTACAGGCACACAAGCCCCTCTCCCAAGCCATCTGCCAGGAGCCCCATGAGGAACACAGCACAGCGCCTGCATCAGAAGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CCA 90 bp | GCAAACCCATGGGCTTCTGATGCAGGCGCTGTGCTGTGTTCCTCATaGGGCTCCTGGCAGATGGCTTGGGAGAGGGGCTTGTGTGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: ANPWASDAGAVLCSS*GSWQMAWERGLCAC Trigger: ACAGGCACACAAGCCCCTCTCCCAAGCCATCTGCCAGGAGCCCCATGAGGAACACAGCACAGCGCCTGCATCAGAAGCCCATGGGTTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS TCA 90 bp | CTCCCTTGCTCCCACTCTGAGCATGTGATGCCCTCTGCCATGAGGTaGGGCAGCAAGAAGGCCCTCACAGATGCCGGCACTGTGGACTTC | + |
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Preference number: 5 (lower is better) Translates to: LPCSHSEHVMPSAMR*GSKKALTDAGTVDF Trigger: GAAGTCCACAGTGCCGGCATCTGTGAGGGCCTTCTTGCTGCCTCACCTCATGGCAGAGGGCATCACATGCTCAGAGTGGGAGCAAGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000654330.1 ENST00000665287.1 |
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| CDS GCA 90 bp | AAGACATGTGATAGGCAAACCCATGGGCTTCTGATGCAGGCGCTGTaGTGTGTTCCTCATGGGGCTCCTGGCAGATGGCTTGGGAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: KTCDRQTHGLLMQAL*CVPHGAPGRWLGRG Trigger: CCCTCTCCCAAGCCATCTGCCAGGAGCCCCATGAGGAACACAGCACAGCGCCTGCATCAGAAGCCCATGGGTTTGCCTATCACATGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS GCA 90 bp | CACAGTACTTGGCGCCCTGTGGTTTTGCGGCAGCAGGTCCACCTCTaGCTCTGTCTCCACATGGCTGTCTTCCCTATGTGTCCATGTCCA | + |
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Preference number: 5 (lower is better) Translates to: HSTWRPVVLRQQVHL*LCLHMAVFPMCPCP Trigger: TGGACATGGACACATAGGGAAGACAGCCATGTGGAGACAGAGGCAGAGGTGGACCTGCTGCCGCAAAACCACAGGGCGCCAAGTACTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000653457.1 ENST00000654260.1 ENST00000654330.1 ENST00000656425.1 ENST00000661397.1 ENST00000665287.1 |
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| CDS CCA 90 bp | ACAGAAGAGATAATCTGCTTGTCAGCTAGAGACAGACAAGAGGCATaGAGAGGGGTGGCTGAAAATAGGGCCGTTGGCATGCGCTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: TEEIICLSARDRQEA*RGVAENRAVGMRSG Trigger: CCCTGAGCGCATGCCAACGGCCCTATTTTCAGCCACCCCTCTCCATGCCTCTTGTCTGTCTCTAGCTGACAAGCAGATTATCTCTTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS TCA 90 bp | TGCAGTGACCCAAATATCAACAAGGCTTGGGAACATTTTGGATCCTaGCAAGGGGCTGCTCTCCAAACCACGTGTGTGCTCAGCGTTGTA | + |
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Preference number: 5 (lower is better) Translates to: CSDPNINKAWEHFGS*QGAALQTTCVLSVV Trigger: TACAACGCTGAGCACACACGTGGTTTGGAGAGCAGCCCCTTGTCAGGATCCAAAATGTTCCCAAGCCTTGTTGATATTTGGGTCACTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS GCA 90 bp | GGTGCCAAAGTACATTGGCAAACAAAGTGGACAGAAGAGATAATCTaGTTGTCAGCTAGAGACAGACAAGAGGCATGGAGAGGGGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: GAKVHWQTKWTEEII*LSARDRQEAWRGVA Trigger: AGCCACCCCTCTCCATGCCTCTTGTCTGTCTCTAGCTGACAAGCAGATTATCTCTTCTGTCCACTTTGTTTGCCAATGTACTTTGGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS GCA 90 bp | AAATATCAACAAGGCTTGGGAACATTTTGGATCCTGACAAGGGGCTaGTCTCCAAACCACGTGTGTGCTCAGCGTTGTACACAGTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: KYQQGLGTFWILTRG*SPNHVCAQRCTQFS Trigger: ACTGAACTGTGTACAACGCTGAGCACACACGTGGTTTGGAGAGCAGCCCCTTGTCAGGATCCAAAATGTTCCCAAGCCTTGTTGATATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CCA 90 bp | CTCAAGCAAAAAGTGAAGGATAAGGCAGAATTACCAAGTGCCTGGTaGAGTCCTGAAGGCATGCCTGAACTCATATGCAGAACCCATCAG | + |
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Preference number: 5 (lower is better) Translates to: LKQKVKDKAELPSAW*SPEGMPELICRTHQ Trigger: CTGATGGGTTCTGCATATGAGTTCAGGCATGCCTTCAGGACTCCACCAGGCACTTGGTAATTCTGCCTTATCCTTCACTTTTTGCTTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653457.1 |
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| CDS CCA 90 bp | CTGCTCAAGCAAAAAGTGAAGGATAAGGCAGAATTACCAAGTGCCTaGTGGAGTCCTGAAGGCATGCCTGAACTCATATGCAGAACCCAT | + |
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Preference number: 5 (lower is better) Translates to: LLKQKVKDKAELPSA*WSPEGMPELICRTH Trigger: ATGGGTTCTGCATATGAGTTCAGGCATGCCTTCAGGACTCCACCAGGCACTTGGTAATTCTGCCTTATCCTTCACTTTTTGCTTGAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653457.1 |
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| CDS TCA 90 bp | CCACATGGCTGTCTTCCCTATGTGTCCATGTCCAAATTTCCCTCCTaGCTACGGCATACAGGTTACAAAAATCAACCTCTCCATCAAACG | + |
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Preference number: 5 (lower is better) Translates to: PHGCLPYVSMSKFPS*LRHTGYKNQPLHQT Trigger: CGTTTGATGGAGAGGTTGATTTTTGTAACCTGTATGCCGTAGTCAGGAGGGAAATTTGGACATGGACACATAGGGAAGACAGCCATGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000654260.1 ENST00000654330.1 ENST00000656425.1 ENST00000661397.1 ENST00000665287.1 |
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| CDS GCA 90 bp | AACATTTTGGATCCTGACAAGGGGCTGCTCTCCAAACCACGTGTGTaGTCAGCGTTGTACACAGTTCAGTTTACTTCATGTGTTGGAATT | + |
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Preference number: 5 (lower is better) Translates to: NILDPDKGLLSKPRV*SALYTVQFTSCVGI Trigger: AATTCCAACACATGAAGTAAACTGAACTGTGTACAACGCTGAGCACACACGTGGTTTGGAGAGCAGCCCCTTGTCAGGATCCAAAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CCA 90 bp | ACGTGTGTGCTCAGCGTTGTACACAGTTCAGTTTACTTCATGTGTTaGAATTCAATGGTGCCAAAGTACATTGGCAAACAAAGTGGACAG | + |
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Preference number: 5 (lower is better) Translates to: TCVLSVVHSSVYFMC*NSMVPKYIGKQSGQ Trigger: CTGTCCACTTTGTTTGCCAATGTACTTTGGCACCATTGAATTCCAACACATGAAGTAAACTGAACTGTGTACAACGCTGAGCACACACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS TCA 90 bp | GGACACAGACAGATGTATGTTTGGATGTTGAGCTGTAATTTTTCATaGGCTGTTACAATAGAGTCTCATGGCTTCCGCTCGAACTTCATT | + |
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Preference number: 5 (lower is better) Translates to: GHRQMYVWMLSCNFS*AVTIESHGFRSNFI Trigger: AATGAAGTTCGAGCGGAAGCCATGAGACTCTATTGTAACAGCTCATGAAAAATTACAGCTCAACATCCAAACATACATCTGTCTGTGTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665287.1 |
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| CDS GCA 90 bp | GCGTTGTACACAGTTCAGTTTACTTCATGTGTTGGAATTCAATGGTaGCAAAGTACATTGGCAAACAAAGTGGACAGAAGAGATAATCTG | + |
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Preference number: 5 (lower is better) Translates to: ALYTVQFTSCVGIQW*QSTLANKVDRRDNL Trigger: CAGATTATCTCTTCTGTCCACTTTGTTTGCCAATGTACTTTGGCACCATTGAATTCCAACACATGAAGTAAACTGAACTGTGTACAACGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CCA 90 bp | TCAGCGTTGTACACAGTTCAGTTTACTTCATGTGTTGGAATTCAATaGTGCCAAAGTACATTGGCAAACAAAGTGGACAGAAGAGATAAT | + |
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Preference number: 5 (lower is better) Translates to: SALYTVQFTSCVGIQ*CQSTLANKVDRRDN Trigger: ATTATCTCTTCTGTCCACTTTGTTTGCCAATGTACTTTGGCACCATTGAATTCCAACACATGAAGTAAACTGAACTGTGTACAACGCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CCA 72 bp | GCGCTGTGCTGTGTTCCTCATGGGGCTCCTGGCAGATaGCTTGGGAGAGGGGCTTGTGTGCCTGTAAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: ALCCVPHGAPGR*LGRGACVPVKP Trigger: CGGCTTTACAGGCACACAAGCCCCTCTCCCAAGCCATCTGCCAGGAGCCCCATGAGGAACACAGCACAGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CCA 72 bp | GATGCAGGCGCTGTGCTGTGTTCCTCATGGGGCTCCTaGCAGATGGCTTGGGAGAGGGGCTTGTGTGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: DAGAVLCSSWGS*QMAWERGLCAC Trigger: ACAGGCACACAAGCCCCTCTCCCAAGCCATCTGCCAGGAGCCCCATGAGGAACACAGCACAGCGCCTGCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CCA 72 bp | TGGGCTTCTGATGCAGGCGCTGTGCTGTGTTCCTCATaGGGCTCCTGGCAGATGGCTTGGGAGAGGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: WASDAGAVLCSS*GSWQMAWERGL Trigger: CAAGCCCCTCTCCCAAGCCATCTGCCAGGAGCCCCATGAGGAACACAGCACAGCGCCTGCATCAGAAGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS GCA 72 bp | TCTCAGTGGCCCACAGTACTTGGCGCCCTGTGGTTTTaGGGCAGCAGGTCCACCTCTGCCTCTGTCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: SQWPTVLGALWF*GSRSTSASVST Trigger: TGTGGAGACAGAGGCAGAGGTGGACCTGCTGCCGCAAAACCACAGGGCGCCAAGTACTGTGGGCCACTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000653457.1 ENST00000654260.1 ENST00000654330.1 ENST00000656425.1 ENST00000661397.1 ENST00000665287.1 |
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| CDS CAA 72 bp | TTCTCAGTGGCCCACAGTACTTGGCGCCCTGTGGTTTaGCGGCAGCAGGTCCACCTCTGCCTCTGTCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: FSVAHSTWRPVV*RQQVHLCLCLH Trigger: GTGGAGACAGAGGCAGAGGTGGACCTGCTGCCGCAAAACCACAGGGCGCCAAGTACTGTGGGCCACTGAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000653457.1 ENST00000654260.1 ENST00000654330.1 ENST00000656425.1 ENST00000661397.1 ENST00000665287.1 |
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| CDS GCA 72 bp | CATGGAGAGGGGTGGCTGAAAATAGGGCCGTTGGCATaGGCTCAGGGACTGGAGTGGAGGAAAGTGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: HGEGWLKIGPLA*AQGLEWRKVLG Trigger: CCCAAGCACTTTCCTCCACTCCAGTCCCTGAGCGCATGCCAACGGCCCTATTTTCAGCCACCCCTCTCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS GCA 72 bp | TGGCGCCCTGTGGTTTTGCGGCAGCAGGTCCACCTCTaGCTCTGTCTCCACATGGCTGTCTTCCCTATGTGT | + |
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Preference number: 6 (lower is better) Translates to: WRPVVLRQQVHL*LCLHMAVFPMC Trigger: ACACATAGGGAAGACAGCCATGTGGAGACAGAGGCAGAGGTGGACCTGCTGCCGCAAAACCACAGGGCGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000653457.1 ENST00000654260.1 ENST00000654330.1 ENST00000656425.1 ENST00000661397.1 ENST00000665287.1 |
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| CDS CAA 90 bp | CCTTTAGTTTTCTCAGTGGCCCACAGTACTTGGCGCCCTGTGGTTTaGCGGCAGCAGGTCCACCTCTGCCTCTGTCTCCACATGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: PLVFSVAHSTWRPVV*RQQVHLCLCLHMAV Trigger: GACAGCCATGTGGAGACAGAGGCAGAGGTGGACCTGCTGCCGCAAAACCACAGGGCGCCAAGTACTGTGGGCCACTGAGAAAACTAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000653457.1 ENST00000654260.1 ENST00000654330.1 ENST00000656425.1 ENST00000661397.1 ENST00000665287.1 |
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| CDS GCA 72 bp | GATAGGCAAACCCATGGGCTTCTGATGCAGGCGCTGTaGTGTGTTCCTCATGGGGCTCCTGGCAGATGGCTT | + |
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Preference number: 6 (lower is better) Translates to: DRQTHGLLMQAL*CVPHGAPGRWL Trigger: AAGCCATCTGCCAGGAGCCCCATGAGGAACACAGCACAGCGCCTGCATCAGAAGCCCATGGGTTTGCCTATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CCA 72 bp | CACAGCAGCGTTATTCTTGTGCCTGTGAGCTCTCCCTaGCTCCCTTGCTCCCACTCTGAGCATGTGATGCCC | + |
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Preference number: 6 (lower is better) Translates to: HSSVILVPVSSP*LPCSHSEHVMP Trigger: GGGCATCACATGCTCAGAGTGGGAGCAAGGGAGCCAGGGAGAGCTCACAGGCACAAGAATAACGCTGCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000654330.1 ENST00000665287.1 |
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| CDS CAA 72 bp | AAGAGGCATGGAGAGGGGTGGCTGAAAATAGGGCCGTaGGCATGCGCTCAGGGACTGGAGTGGAGGAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: KRHGEGWLKIGP*ACAQGLEWRKV Trigger: CACTTTCCTCCACTCCAGTCCCTGAGCGCATGCCAACGGCCCTATTTTCAGCCACCCCTCTCCATGCCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS GCA 72 bp | GTTATTCTTGTGCCTGTGAGCTCTCCCTGGCTCCCTTaGTCCCACTCTGAGCATGTGATGCCCTCTGCCATG | + |
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Preference number: 6 (lower is better) Translates to: VILVPVSSPWLP*SHSEHVMPSAM Trigger: CATGGCAGAGGGCATCACATGCTCAGAGTGGGAGCAAGGGAGCCAGGGAGAGCTCACAGGCACAAGAATAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000654330.1 ENST00000665287.1 |
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| CDS CCA 72 bp | TGTCAGCTAGAGACAGACAAGAGGCATGGAGAGGGGTaGCTGAAAATAGGGCCGTTGGCATGCGCTCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: CQLETDKRHGEG*LKIGPLACAQG Trigger: TCCCTGAGCGCATGCCAACGGCCCTATTTTCAGCCACCCCTCTCCATGCCTCTTGTCTGTCTCTAGCTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CCA 72 bp | TCCTCTCCTTTAGTTTTCTCAGTGGCCCACAGTACTTaGCGCCCTGTGGTTTTGCGGCAGCAGGTCCACCTC | + |
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Preference number: 6 (lower is better) Translates to: SSPLVFSVAHST*RPVVLRQQVHL Trigger: GAGGTGGACCTGCTGCCGCAAAACCACAGGGCGCCAAGTACTGTGGGCCACTGAGAAAACTAAAGGAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000653457.1 ENST00000654260.1 ENST00000654330.1 ENST00000656425.1 ENST00000661397.1 ENST00000665287.1 |
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| CDS CCA 72 bp | AAAATAGGGCCGTTGGCATGCGCTCAGGGACTGGAGTaGAGGAAAGTGCTTGGGGGCACTGCAAATAGCACT | + |
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Preference number: 6 (lower is better) Translates to: KIGPLACAQGLE*RKVLGGTANST Trigger: AGTGCTATTTGCAGTGCCCCCAAGCACTTTCCTCCACTCCAGTCCCTGAGCGCATGCCAACGGCCCTATTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CAA 72 bp | GCACTGCAAATAGCACTGATGGGGAAATCTAGGAGGTaGGGTCACACTGAGCCTGTGAGCCACGGATCAGGA | + |
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Preference number: 6 (lower is better) Translates to: ALQIALMGKSRR*GHTEPVSHGSG Trigger: TCCTGATCCGTGGCTCACAGGCTCAGTGTGACCCAACCTCCTAGATTTCCCCATCAGTGCTATTTGCAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS GCA 72 bp | CAAGGCTTGGGAACATTTTGGATCCTGACAAGGGGCTaGTCTCCAAACCACGTGTGTGCTCAGCGTTGTACA | + |
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Preference number: 6 (lower is better) Translates to: QGLGTFWILTRG*SPNHVCAQRCT Trigger: TGTACAACGCTGAGCACACACGTGGTTTGGAGAGCAGCCCCTTGTCAGGATCCAAAATGTTCCCAAGCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CCA 72 bp | ATAATCTGCTTGTCAGCTAGAGACAGACAAGAGGCATaGAGAGGGGTGGCTGAAAATAGGGCCGTTGGCATG | + |
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Preference number: 6 (lower is better) Translates to: IICLSARDRQEA*RGVAENRAVGM Trigger: CATGCCAACGGCCCTATTTTCAGCCACCCCTCTCCATGCCTCTTGTCTGTCTCTAGCTGACAAGCAGATTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CAA 90 bp | CAGAGATCTGCAGTGACCCAAATATCAACAAGGCTTGGGAACATTTaGGATCCTGACAAGGGGCTGCTCTCCAAACCACGTGTGTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: QRSAVTQISTRLGNI*DPDKGLLSKPRVCS Trigger: TGAGCACACACGTGGTTTGGAGAGCAGCCCCTTGTCAGGATCCAAAATGTTCCCAAGCCTTGTTGATATTTGGGTCACTGCAGATCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS TCA 72 bp | TGGGGAAATCTAGGAGGTTGGGTCACACTGAGCCTGTaGGCCACGGATCAGGAGAAAACAAGACATGTGATA | + |
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Preference number: 6 (lower is better) Translates to: WGNLGGWVTLSL*ATDQEKTRHVI Trigger: TATCACATGTCTTGTTTTCTCCTGATCCGTGGCTCACAGGCTCAGTGTGACCCAACCTCCTAGATTTCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS TCA 72 bp | CCAAATATCAACAAGGCTTGGGAACATTTTGGATCCTaGCAAGGGGCTGCTCTCCAAACCACGTGTGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: PNINKAWEHFGS*QGAALQTTCVL Trigger: GAGCACACACGTGGTTTGGAGAGCAGCCCCTTGTCAGGATCCAAAATGTTCCCAAGCCTTGTTGATATTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS GCA 72 bp | GATCCTGACAAGGGGCTGCTCTCCAAACCACGTGTGTaGTCAGCGTTGTACACAGTTCAGTTTACTTCATGT | + |
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Preference number: 6 (lower is better) Translates to: DPDKGLLSKPRV*SALYTVQFTSC Trigger: ACATGAAGTAAACTGAACTGTGTACAACGCTGAGCACACACGTGGTTTGGAGAGCAGCCCCTTGTCAGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CAA 72 bp | GCAGTGACCCAAATATCAACAAGGCTTGGGAACATTTaGGATCCTGACAAGGGGCTGCTCTCCAAACCACGT | + |
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Preference number: 6 (lower is better) Translates to: AVTQISTRLGNI*DPDKGLLSKPR Trigger: ACGTGGTTTGGAGAGCAGCCCCTTGTCAGGATCCAAAATGTTCCCAAGCCTTGTTGATATTTGGGTCACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CAA 90 bp | GATCCTGACAAGGGGCTGCTCTCCAAACCACGTGTGTGCTCAGCGTaGTACACAGTTCAGTTTACTTCATGTGTTGGAATTCAATGGTGC | + |
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Preference number: 6 (lower is better) Translates to: DPDKGLLSKPRVCSA*YTVQFTSCVGIQWC Trigger: GCACCATTGAATTCCAACACATGAAGTAAACTGAACTGTGTACAACGCTGAGCACACACGTGGTTTGGAGAGCAGCCCCTTGTCAGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CAA 90 bp | GCCAAAGTACATTGGCAAACAAAGTGGACAGAAGAGATAATCTGCTaGTCAGCTAGAGACAGACAAGAGGCATGGAGAGGGGTGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: AKVHWQTKWTEEIIC*SARDRQEAWRGVAE Trigger: TTCAGCCACCCCTCTCCATGCCTCTTGTCTGTCTCTAGCTGACAAGCAGATTATCTCTTCTGTCCACTTTGTTTGCCAATGTACTTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS TCA 72 bp | GAATGGATGAATGAGGGCTCTGTTCTCATGACGGGATaGATGTTGCTGTCCCAGGAGTGGGTTTATTATCAC | + |
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Preference number: 6 (lower is better) Translates to: EWMNEGSVLMTG*MLLSQEWVYYH Trigger: GTGATAATAAACCCACTCCTGGGACAGCAACATTCATCCCGTCATGAGAACAGAGCCCTCATTCATCCATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000417883.2 ENST00000654330.1 ENST00000656425.1 ENST00000661397.1 ENST00000665287.1 |
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| CDS CCA 72 bp | AAAGTGAAGGATAAGGCAGAATTACCAAGTGCCTGGTaGAGTCCTGAAGGCATGCCTGAACTCATATGCAGA | + |
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Preference number: 6 (lower is better) Translates to: KVKDKAELPSAW*SPEGMPELICR Trigger: TCTGCATATGAGTTCAGGCATGCCTTCAGGACTCCACCAGGCACTTGGTAATTCTGCCTTATCCTTCACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653457.1 |
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| CDS CCA 72 bp | CAAAAAGTGAAGGATAAGGCAGAATTACCAAGTGCCTaGTGGAGTCCTGAAGGCATGCCTGAACTCATATGC | + |
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Preference number: 6 (lower is better) Translates to: QKVKDKAELPSA*WSPEGMPELIC Trigger: GCATATGAGTTCAGGCATGCCTTCAGGACTCCACCAGGCACTTGGTAATTCTGCCTTATCCTTCACTTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653457.1 |
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| CDS CAA 72 bp | AAGGGGCTGCTCTCCAAACCACGTGTGTGCTCAGCGTaGTACACAGTTCAGTTTACTTCATGTGTTGGAATT | + |
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Preference number: 6 (lower is better) Translates to: KGLLSKPRVCSA*YTVQFTSCVGI Trigger: AATTCCAACACATGAAGTAAACTGAACTGTGTACAACGCTGAGCACACACGTGGTTTGGAGAGCAGCCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS TCA 72 bp | TGTCTTCCCTATGTGTCCATGTCCAAATTTCCCTCCTaGCTACGGCATACAGGTTACAAAAATCAACCTCTC | + |
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Preference number: 6 (lower is better) Translates to: CLPYVSMSKFPS*LRHTGYKNQPL Trigger: GAGAGGTTGATTTTTGTAACCTGTATGCCGTAGTCAGGAGGGAAATTTGGACATGGACACATAGGGAAGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000654260.1 ENST00000654330.1 ENST00000656425.1 ENST00000661397.1 ENST00000665287.1 |
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| CDS CAA 90 bp | CACGTGTGTGCTCAGCGTTGTACACAGTTCAGTTTACTTCATGTGTaGGAATTCAATGGTGCCAAAGTACATTGGCAAACAAAGTGGACA | + |
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Preference number: 6 (lower is better) Translates to: HVCAQRCTQFSLLHV*EFNGAKVHWQTKWT Trigger: TGTCCACTTTGTTTGCCAATGTACTTTGGCACCATTGAATTCCAACACATGAAGTAAACTGAACTGTGTACAACGCTGAGCACACACGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CAA 72 bp | GCTCAGCGTTGTACACAGTTCAGTTTACTTCATGTGTaGGAATTCAATGGTGCCAAAGTACATTGGCAAACA | + |
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Preference number: 6 (lower is better) Translates to: AQRCTQFSLLHV*EFNGAKVHWQT Trigger: TGTTTGCCAATGTACTTTGGCACCATTGAATTCCAACACATGAAGTAAACTGAACTGTGTACAACGCTGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CAA 72 bp | AACAGAAAATGGACGAGAGGTGCAGAAACACCTAGATaGCTTACAGCTCTGCGTTTGCCTTATTTAAACATG | + |
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Preference number: 6 (lower is better) Translates to: NRKWTRGAETPR*LTALRLPYLNM Trigger: CATGTTTAAATAAGGCAAACGCAGAGCTGTAAGCAATCTAGGTGTTTCTGCACCTCTCGTCCATTTTCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653457.1 ENST00000665287.1 |
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| CDS CAA 72 bp | TACAGAAAATGGACGAGAGGTGCAGAAACACCTAGATaGCTTACAGCTCTGCGTTTGCCTTATTTAAACATG | + |
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Preference number: 6 (lower is better) Translates to: YRKWTRGAETPR*LTALRLPYLNM Trigger: CATGTTTAAATAAGGCAAACGCAGAGCTGTAAGCAATCTAGGTGTTTCTGCACCTCTCGTCCATTTTCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654330.1 |
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| CDS CAA 90 bp | CTGCAGTTATCTCATCAGGAAGATATATTGTATTTAAGCCTTTATTaGCCCTCTTTCACACCCAGTCAAGGTGGCTTAGGGAGTATCATT | + |
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Preference number: 6 (lower is better) Translates to: LQLSHQEDILYLSLY*PSFTPSQGGLGSII Trigger: AATGATACTCCCTAAGCCACCTTGACTGGGTGTGAAAGAGGGCAAATAAAGGCTTAAATACAATATATCTTCCTGATGAGATAACTGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653457.1 ENST00000665287.1 |
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| CDS CCA 72 bp | CTCAGCGTTGTACACAGTTCAGTTTACTTCATGTGTTaGAATTCAATGGTGCCAAAGTACATTGGCAAACAA | + |
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Preference number: 6 (lower is better) Translates to: LSVVHSSVYFMC*NSMVPKYIGKQ Trigger: TTGTTTGCCAATGTACTTTGGCACCATTGAATTCCAACACATGAAGTAAACTGAACTGTGTACAACGCTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CAA 90 bp | TTTCTCCCACAAATAGGTCTGCAGTTATCTCATCAGGAAGATATATaGTATTTAAGCCTTTATTTGCCCTCTTTCACACCCAGTCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: FLPQIGLQLSHQEDI*YLSLYLPSFTPSQG Trigger: ACCTTGACTGGGTGTGAAAGAGGGCAAATAAAGGCTTAAATACAATATATCTTCCTGATGAGATAACTGCAGACCTATTTGTGGGAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653457.1 ENST00000665287.1 |
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| CDS GCA 72 bp | ACAGTTCAGTTTACTTCATGTGTTGGAATTCAATGGTaGCAAAGTACATTGGCAAACAAAGTGGACAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: TVQFTSCVGIQW*QSTLANKVDRR Trigger: TCTTCTGTCCACTTTGTTTGCCAATGTACTTTGGCACCATTGAATTCCAACACATGAAGTAAACTGAACTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CCA 72 bp | TACACAGTTCAGTTTACTTCATGTGTTGGAATTCAATaGTGCCAAAGTACATTGGCAAACAAAGTGGACAGA | + |
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Preference number: 6 (lower is better) Translates to: YTVQFTSCVGIQ*CQSTLANKVDR Trigger: TCTGTCCACTTTGTTTGCCAATGTACTTTGGCACCATTGAATTCCAACACATGAAGTAAACTGAACTGTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000417883.2 ENST00000663142.1 ENST00000668784.1 |
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| CDS CAA 72 bp | TTAAAAGGTGGTGTCTCTCATATTCTTCAGCATAACTaGGGTCACAGAAACCCAGGCATAAAAATTCATTGT | + |
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Preference number: 6 (lower is better) Translates to: LKGGVSHILQHN*GHRNPGIKIHC Trigger: ACAATGAATTTTTATGCCTGGGTTTCTGTGACCCAAGTTATGCTGAAGAATATGAGAGACACCACCTTTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000417883.2 ENST00000653457.1 ENST00000654260.1 ENST00000654330.1 ENST00000656425.1 ENST00000661397.1 ENST00000665287.1 |
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| CDS CAA 90 bp | GCAGAAAGTAGTTCCCATAGCTTTAGAATTGGTTATTTGTGTTTGTaGTTGGCCTTAAAATACTGTATTAATTCACATAGGGACACAGAC | + |
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Preference number: 6 (lower is better) Translates to: AESSSHSFRIGYLCL*LALKYCINSHRDTD Trigger: GTCTGTGTCCCTATGTGAATTAATACAGTATTTTAAGGCCAACAACAAACACAAATAACCAATTCTAAAGCTATGGGAACTACTTTCTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665287.1 |
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| CDS CAA 72 bp | TGTCGAAGCACGTTTTCAAGAGTTAGCACATCTCCATaGTCTATAAACTGCATGCATATTTTATGCCTAAAA | + |
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Preference number: 6 (lower is better) Translates to: CRSTFSRVSTSP*SINCMHILCLK Trigger: TTTTAGGCATAAAATATGCATGCAGTTTATAGACAATGGAGATGTGCTAACTCTTGAAAACGTGCTTCGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000417883.2 ENST00000654260.1 ENST00000654330.1 ENST00000656425.1 ENST00000661397.1 ENST00000665287.1 |
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