Pregenerated sensors for LINC00700 (Homo sapiens)
Ensembl gene IDs: ENSG00000234962Ensembl transcript IDs: ENST00000413603.6, ENST00000438372.1, ENST00000454424.2, ENST00000654063.1, ENST00000660120.1, ENST00000664401.1, ENST00000664577.1, ENST00000665101.1, ENST00000667563.1, ENST00000671670.1
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGGCAGGCAGAGGAGCTGCACCTGCTGTTCCTGCCTGCAGGGAATaGAGGGTGTTTCTGGGCATGCATGGCCCTGGGGTGGCCATGGCC | + |
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Preference number: 5 (lower is better) Translates to: LAGRGAAPAVPACRE*RVFLGMHGPGVAMA Trigger: GGCCATGGCCACCCCAGGGCCATGCATGCCCAGAAACACCCTCCATTCCCTGCAGGCAGGAACAGCAGGTGCAGCTCCTCTGCCTGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438372.1 |
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| CDS GCA 90 bp | GTCCCAAAGCTGGCAGGCAGAGGAGCTGCACCTGCTGTTCCTGCCTaGAGGGAATGGAGGGTGTTTCTGGGCATGCATGGCCCTGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: VPKLAGRGAAPAVPA*REWRVFLGMHGPGV Trigger: CACCCCAGGGCCATGCATGCCCAGAAACACCCTCCATTCCCTGCAGGCAGGAACAGCAGGTGCAGCTCCTCTGCCTGCCAGCTTTGGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438372.1 |
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| CDS GCA 90 bp | AGAGGTCCCAAAGCTGGCAGGCAGAGGAGCTGCACCTGCTGTTCCTaGCTGCAGGGAATGGAGGGTGTTTCTGGGCATGCATGGCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: RGPKAGRQRSCTCCS*LQGMEGVSGHAWPW Trigger: CCAGGGCCATGCATGCCCAGAAACACCCTCCATTCCCTGCAGGCAGGAACAGCAGGTGCAGCTCCTCTGCCTGCCAGCTTTGGGACCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438372.1 |
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| CDS GCA 90 bp | AGGCGGGAAAATCGTGACTCAGCCCATCCACACAGGCGCGTTTCCTaGGGGCTCCGTCCTGACCCTGCTTCCAGCGGCATTTCCAGTAAG | + |
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Preference number: 5 (lower is better) Translates to: RRENRDSAHPHRRVS*GLRPDPASSGISSK Trigger: CTTACTGGAAATGCCGCTGGAAGCAGGGTCAGGACGGAGCCCGCAGGAAACGCGCCTGTGTGGATGGGCTGAGTCACGATTTTCCCGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413603.6 |
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| CDS CCA 90 bp | GGAGGCCCCATGTGGCAAGTGGCACTTTACCCTCAGTCCTCAGCCTaGGGTCATGGTCCTGAGCCCTGCTTTAAAGTGAATGCACGTCTG | + |
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Preference number: 5 (lower is better) Translates to: GGPMWQVALYPQSSA*GHGPEPCFKVNARL Trigger: CAGACGTGCATTCACTTTAAAGCAGGGCTCAGGACCATGACCCCAGGCTGAGGACTGAGGGTAAAGTGCCACTTGCCACATGGGGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000438372.1 |
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| CDS GCA 90 bp | TGCGGCCATTCATGTTGCCCACTCAGGGTTTATTTACAGGCACTTTaGCTGTGTCTTCAGGGCATGGCCCTTCCTACAGCCATGTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: CGHSCCPLRVYLQAL*LCLQGMALPTAMCP Trigger: GGGGCACATGGCTGTAGGAAGGGCCATGCCCTGAAGACACAGGCAAAGTGCCTGTAAATAAACCCTGAGTGGGCAACATGAATGGCCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413603.6 ENST00000454424.2 ENST00000660120.1 |
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| CDS GCA 90 bp | CAGTTCCTTCCTTCCCGGCGGGTGCAGTTACTTTGCCCCATCCACTaGGTAGTGCAGTTACTTCTCTCCATCCACTGTGAACACTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: QFLPSRRVQLLCPIH*VVQLLLSIHCEHCP Trigger: GGGACAGTGTTCACAGTGGATGGAGAGAAGTAACTGCACTACGCAGTGGATGGGGCAAAGTAACTGCACCCGCCGGGAAGGAAGGAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667563.1 ENST00000671670.1 |
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| CDS GCA 90 bp | GTGTATCCTTCAGTTGGATCTGCTGCAACAATCAGACACGGAATCTaGGGGACCCTCCATCTTGGACTTCCGGCCTCCAGAACGGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: VYPSVGSAATIRHGI*GTLHLGLPASRTEV Trigger: GACTTCCGTTCTGGAGGCCGGAAGTCCAAGATGGAGGGTCCCGCAGATTCCGTGTCTGATTGTTGCAGCAGATCCAACTGAAGGATACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000413603.6 ENST00000454424.2 ENST00000654063.1 ENST00000664401.1 ENST00000667563.1 ENST00000671670.1 |
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| CDS GCA 90 bp | GCACTTTGCCTGTGTCTTCAGGGCATGGCCCTTCCTACAGCCATGTaGCCCGTGATCATTATGACGAGAGGCAGAGACAAAATGCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: ALCLCLQGMALPTAM*PVIIMTRGRDKMPL Trigger: AAGAGGCATTTTGTCTCTGCCTCTCGTCATAATGATCACGGGGCACATGGCTGTAGGAAGGGCCATGCCCTGAAGACACAGGCAAAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413603.6 |
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| CDS CCA 90 bp | ATCTGCTGCAACAATCAGACACGGAATCTGCGGGACCCTCCATCTTaGACTTCCGGCCTCCAGAACGGAAGTCAATGTCTGTGGTTTAGA | + |
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Preference number: 5 (lower is better) Translates to: ICCNNQTRNLRDPPS*TSGLQNGSQCLWFR Trigger: TCTAAACCACAGACATTGACTTCCGTTCTGGAGGCCGGAAGTCCAAGATGGAGGGTCCCGCAGATTCCGTGTCTGATTGTTGCAGCAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000413603.6 ENST00000454424.2 ENST00000654063.1 ENST00000664401.1 ENST00000667563.1 |
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| CDS CCA 90 bp | AAAGTGGAAGAAATCAGACAGGAGTCCAGGGAAGGGGTTAATGGCTaGAGTCATGAGCTCCATCACTTGCGTAAGGCCAGGAAAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: KVEEIRQESREGVNG*SHELHHLRKARKAQ Trigger: CTGGGCTTTCCTGGCCTTACGCAAGTGATGGAGCTCATGACTCCAGCCATTAACCCCTTCCCTGGACTCCTGTCTGATTTCTTCCACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671670.1 |
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| CDS CCA 90 bp | TCTGTAGAAAAAGACCAGACACGGAATCTGCGGGACCCTCCATCTTaGACTTCCGGCCTCCAGAACGGAAGTCAATGTCTGTGGTTTAGA | + |
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Preference number: 5 (lower is better) Translates to: SVEKDQTRNLRDPPS*TSGLQNGSQCLWFR Trigger: TCTAAACCACAGACATTGACTTCCGTTCTGGAGGCCGGAAGTCCAAGATGGAGGGTCCCGCAGATTCCGTGTCTGGTCTTTTTCTACAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000438372.1 |
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| CDS TCA 90 bp | TTCACTGTTTTACATATTCAGGTGAGGTTCTGCTCGGCGCACTGGTaGGTGCATGCTTTCTCCCCACAGCGCTTCTCTACCTCAAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: FTVLHIQVRFCSAHW*VHAFSPQRFSTSRK Trigger: CTTTCTTGAGGTAGAGAAGCGCTGTGGGGAGAAAGCATGCACTCACCAGTGCGCCGAGCAGAACCTCACCTGAATATGTAAAACAGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413603.6 |
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| CDS TCA 90 bp | CTGAGCAGGCTAAGAGAGATTTTGGTTCTGAGAAAGGAAGTGCTGTaGCCAATACCTGACAATGCCGGGGTGGCTTTGGAACTGGGTAAC | + |
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Preference number: 5 (lower is better) Translates to: LSRLREILVLRKEVL*PIPDNAGVALELGN Trigger: GTTACCCAGTTCCAAAGCCACCCCGGCATTGTCAGGTATTGGTCACAGCACTTCCTTTCTCAGAACCAAAATCTCTCTTAGCCTGCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413603.6 |
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| CDS GCA 90 bp | TTTACATATTCAGGTGAGGTTCTGCTCGGCGCACTGGTGAGTGCATaGTTTCTCCCCACAGCGCTTCTCTACCTCAAGAAAGAATTCACG | + |
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Preference number: 5 (lower is better) Translates to: FTYSGEVLLGALVSA*FLPTALLYLKKEFT Trigger: CGTGAATTCTTTCTTGAGGTAGAGAAGCGCTGTGGGGAGAAAGCATGCACTCACCAGTGCGCCGAGCAGAACCTCACCTGAATATGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413603.6 |
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| CDS GCA 90 bp | CCAGGAAAGCCCAGGTCAGACTCTCTAGAGAGACAGCCTGGGCATTaGAGAATTCAGAAGTTGAGTAGAAACAGGCAAATCTCACTGGAG | + |
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Preference number: 5 (lower is better) Translates to: PGKPRSDSLERQPGH*RIQKLSRNRQISLE Trigger: CTCCAGTGAGATTTGCCTGTTTCTACTCAACTTCTGAATTCTGCAATGCCCAGGCTGTCTCTCTAGAGAGTCTGACCTGGGCTTTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671670.1 |
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| CDS CCA 90 bp | ATTTTGCCAATGTTTCAGACACGGAATCTGCGGGACCCTCCATCTTaGACTTCCGGCCTCCAGAACGGAAGTCAATGTCTGTGGTTTAGA | + |
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Preference number: 5 (lower is better) Translates to: ILPMFQTRNLRDPPS*TSGLQNGSQCLWFR Trigger: TCTAAACCACAGACATTGACTTCCGTTCTGGAGGCCGGAAGTCCAAGATGGAGGGTCCCGCAGATTCCGTGTCTGAAACATTGGCAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000660120.1 ENST00000664577.1 ENST00000665101.1 |
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| CDS TCA 90 bp | AATGGGGACATTTGGAGACAGATGCACACACAGGAAGAATCCACGTaGAGTCAGAGGCAGAGATTAGGACCCGTCAACAGGGTGAGTAAT | + |
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Preference number: 5 (lower is better) Translates to: NGDIWRQMHTQEEST*SQRQRLGPVNRVSN Trigger: ATTACTCACCCTGTTGACGGGTCCTAATCTCTGCCTCTGACTTCACGTGGATTCTTCCTGTGTGTGCATCTGTCTCCAAATGTCCCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413603.6 |
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| CDS CCA 90 bp | TTTCACCAGCAGAGGCTTCCGATTGTAAATCTGACAATGCCGGGGTaGCTTTGGAACTGGGTAACGGTTAGAGGCAGAGAGAGTTTTAAC | + |
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Preference number: 5 (lower is better) Translates to: FHQQRLPIVNLTMPG*LWNWVTVRGRESFN Trigger: GTTAAAACTCTCTCTGCCTCTAACCGTTACCCAGTTCCAAAGCCACCCCGGCATTGTCAGATTTACAATCGGAAGCCTCTGCTGGTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665101.1 |
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| CDS GCA 90 bp | TTGTGTCCGATTAAAATGGTTGGTGTATCCTTCAGTTGGATCTGCTaGAACAATCAGACACGGAATCTGCGGGACCCTCCATCTTGGACT | + |
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Preference number: 5 (lower is better) Translates to: LCPIKMVGVSFSWIC*NNQTRNLRDPPSWT Trigger: AGTCCAAGATGGAGGGTCCCGCAGATTCCGTGTCTGATTGTTGCAGCAGATCCAACTGAAGGATACACCAACCATTTTAATCGGACACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000413603.6 ENST00000454424.2 ENST00000654063.1 ENST00000664401.1 ENST00000667563.1 ENST00000671670.1 |
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| CDS GCA 90 bp | CTTTTGTGTCCGATTAAAATGGTTGGTGTATCCTTCAGTTGGATCTaGTGCAACAATCAGACACGGAATCTGCGGGACCCTCCATCTTGG | + |
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Preference number: 5 (lower is better) Translates to: LLCPIKMVGVSFSWI*CNNQTRNLRDPPSW Trigger: CCAAGATGGAGGGTCCCGCAGATTCCGTGTCTGATTGTTGCAGCAGATCCAACTGAAGGATACACCAACCATTTTAATCGGACACAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000413603.6 ENST00000454424.2 ENST00000654063.1 ENST00000664401.1 ENST00000667563.1 ENST00000671670.1 |
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| CDS GCA 90 bp | TGCATGGTGCCTTGGCCCACAGACAATAAATTTGAACTAACAGTGTaGTTCTGTGTCTGTAGGTGGCCAAGGCTAAACGTGGAACAAGAT | + |
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Preference number: 5 (lower is better) Translates to: CMVPWPTDNKFELTV*FCVCRWPRLNVEQD Trigger: ATCTTGTTCCACGTTTAGCCTTGGCCACCTACAGACACAGAAGCACACTGTTAGTTCAAATTTATTGTCTGTGGGCCAAGGCACCATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667563.1 ENST00000671670.1 |
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| CDS CCA 90 bp | AAGTGCTGTGACCAATACCTGACAATGCCGGGGTGGCTTTGGAACTaGGTAACGGTTAGAGGCAGAGAGAGTTTTAACATTTATGTCAGA | + |
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Preference number: 5 (lower is better) Translates to: KCCDQYLTMPGWLWN*VTVRGRESFNIYVR Trigger: TCTGACATAAATGTTAAAACTCTCTCTGCCTCTAACCGTTACCCAGTTCCAAAGCCACCCCGGCATTGTCAGGTATTGGTCACAGCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413603.6 |
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| CDS CCA 90 bp | CAGCAGAGGCTTCCGATTGTAAATCTGACAATGCCGGGGTGGCTTTaGAACTGGGTAACGGTTAGAGGCAGAGAGAGTTTTAACATTTAT | + |
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Preference number: 5 (lower is better) Translates to: QQRLPIVNLTMPGWL*NWVTVRGRESFNIY Trigger: ATAAATGTTAAAACTCTCTCTGCCTCTAACCGTTACCCAGTTCCAAAGCCACCCCGGCATTGTCAGATTTACAATCGGAAGCCTCTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665101.1 |
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| CDS CCA 90 bp | GTTTATTTCCAAGGTGTGCTCAGAGGCAGAGTAGATAACTACTGTTaGCTCTACTCTTTCTCCTCACCTAGGGAAGCACATTGTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: VYFQGVLRGRVDNYC*LYSFSSPREAHCPA Trigger: AGCAGGACAATGTGCTTCCCTAGGTGAGGAGAAAGAGTAGAGCCAACAGTAGTTATCTACTCTGCCTCTGAGCACACCTTGGAAATAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667563.1 ENST00000671670.1 |
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| CDS CCA 90 bp | TACAGGATTCTCATTGTGTGTAGGAAGGAGGCCACAAGGTGTTTATaGCAACTGGGGTCTGGAATATATTTGGAGGGAGAACTTGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: YRILIVCRKEATRCL*QLGSGIYLEGELGK Trigger: CTTGCCAAGTTCTCCCTCCAAATATATTCCAGACCCCAGTTGCCATAAACACCTTGTGGCCTCCTTCCTACACACAATGAGAATCCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667563.1 ENST00000671670.1 |
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| CDS GCA 90 bp | TGTTTAACTGGATTCTCATTTTGTCTGGTCTGCGGCCATTCATGTTaGCCACTCAGGGTTTATTTACAGGCACTTTGCCTGTGTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: CLTGFSFCLVCGHSC*PLRVYLQALCLCLQ Trigger: CTGAAGACACAGGCAAAGTGCCTGTAAATAAACCCTGAGTGGGCAACATGAATGGCCGCAGACCAGACAAAATGAGAATCCAGTTAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000413603.6 ENST00000454424.2 ENST00000660120.1 |
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| CDS CCA 90 bp | AGGCTTCCGATTGTAAATCTGACAATGCCGGGGTGGCTTTGGAACTaGGTAACGGTTAGAGGCAGAGAGAGTTTTAACATTTATGTCAGA | + |
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Preference number: 5 (lower is better) Translates to: RLPIVNLTMPGWLWN*VTVRGRESFNIYVR Trigger: TCTGACATAAATGTTAAAACTCTCTCTGCCTCTAACCGTTACCCAGTTCCAAAGCCACCCCGGCATTGTCAGATTTACAATCGGAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665101.1 |
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| CDS CCA 90 bp | TTAATGTCTACTTTCACCATAGACGATGAATGTTCAAGTTGGCGGTaGCTCATCCCAACAGGAAGAACATGTCCACAGCAGTTCCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: LMSTFTIDDECSSWR*LIPTGRTCPQQFLP Trigger: AGGAAGGAACTGCTGTGGACATGTTCTTCCTGTTGGGATGAGCCACCGCCAACTTGAACATTCATCGTCTATGGTGAAAGTAGACATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667563.1 ENST00000671670.1 |
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| CDS TCA 90 bp | ATCACTAGGGTGAGCCTTAATGAAATGCCTAAAGAAGTGCCCTTATaGAATGGGGACATTTGGAGACAGATGCACACACAGGAAGAATCC | + |
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Preference number: 5 (lower is better) Translates to: ITRVSLNEMPKEVPL*NGDIWRQMHTQEES Trigger: GGATTCTTCCTGTGTGTGCATCTGTCTCCAAATGTCCCCATTTCATAAGGGCACTTCTTTAGGCATTTCATTAAGGCTCACCCTAGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413603.6 |
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| CDS CCA 90 bp | TGGTTTAGAAGCTGCCTGTTCTGTGCTTTTGTGTTGCAGGCTGAGTaGACTAAGGGGCATATTTCATGCACTTGTTTAACTGGATTCTCA | + |
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Preference number: 5 (lower is better) Translates to: WFRSCLFCAFVLQAE*TKGHISCTCLTGFS Trigger: TGAGAATCCAGTTAAACAAGTGCATGAAATATGCCCCTTAGTCCACTCAGCCTGCAACACAAAAGCACAGAACAGGCAGCTTCTAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000413603.6 ENST00000438372.1 ENST00000454424.2 ENST00000654063.1 ENST00000660120.1 ENST00000664401.1 ENST00000664577.1 ENST00000665101.1 ENST00000667563.1 |
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| CDS GCA 90 bp | CATATTTCATGCACTTGTTTAACTGGATTCTCATTTTGTCTGGTCTaGGGCCATTCATGTTGCCCACTCAGGGTTTATTTACAGGCACTT | + |
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Preference number: 5 (lower is better) Translates to: HISCTCLTGFSFCLV*GHSCCPLRVYLQAL Trigger: AAGTGCCTGTAAATAAACCCTGAGTGGGCAACATGAATGGCCGCAGACCAGACAAAATGAGAATCCAGTTAAACAAGTGCATGAAATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000413603.6 ENST00000438372.1 ENST00000454424.2 ENST00000654063.1 ENST00000660120.1 ENST00000664401.1 ENST00000664577.1 ENST00000665101.1 ENST00000667563.1 |
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| CDS CCA 90 bp | TCAGAAGAAGACTCAATTGTTCTGAAGATACAGTTGGTAGACATATaGATGTTAAAGGTGATTCTGGGGAGGGCTCAGACGGAAATAGGA | + |
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Preference number: 5 (lower is better) Translates to: SEEDSIVLKIQLVDI*MLKVILGRAQTEIG Trigger: TCCTATTTCCGTCTGAGCCCTCCCCAGAATCACCTTTAACATCCATATGTCTACCAACTGTATCTTCAGAACAATTGAGTCTTCTTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000413603.6 ENST00000654063.1 ENST00000665101.1 |
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| CDS CCA 90 bp | CACTCTGGAGCTAGAAAACCATTTGTCCTCTTCAAATCACACTTCTaGTGCACTCTAGACACATTTCAGAAAATACTGATAGGCTCGAAG | + |
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Preference number: 5 (lower is better) Translates to: HSGARKPFVLFKSHF*CTLDTFQKILIGSK Trigger: CTTCGAGCCTATCAGTATTTTCTGAAATGTGTCTAGAGTGCACCAGAAGTGTGATTTGAAGAGGACAAATGGTTTTCTAGCTCCAGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664401.1 ENST00000664577.1 |
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| CDS CCA 90 bp | ACAGACAATAAATTTGAACTAACAGTGTGCTTCTGTGTCTGTAGGTaGCCAAGGCTAAACGTGGAACAAGATACAGGATTCTCATTGTGT | + |
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Preference number: 5 (lower is better) Translates to: TDNKFELTVCFCVCR*PRLNVEQDTGFSLC Trigger: ACACAATGAGAATCCTGTATCTTGTTCCACGTTTAGCCTTGGCCACCTACAGACACAGAAGCACACTGTTAGTTCAAATTTATTGTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667563.1 ENST00000671670.1 |
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| CDS CCA 90 bp | TGGTATTGCTTGGTAAGTTCTCTCTTCTGTGTGATGGCAGTTTTATaGCAAAGAAAGGGACATTCAGTATTGACTTCCATATTTTCACCA | + |
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Preference number: 5 (lower is better) Translates to: WYCLVSSLFCVMAVL*QRKGHSVLTSIFSP Trigger: TGGTGAAAATATGGAAGTCAATACTGAATGTCCCTTTCTTTGCCATAAAACTGCCATCACACAGAAGAGAGAACTTACCAAGCAATACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000413603.6 ENST00000665101.1 |
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| CDS TCA 90 bp | ATTTTTGTTGTTGTTGTTGTTACAAATAGACTCACTCTAAACCAGTaGGCAAATATAAGAGCATATATGCCAGGCGGGAAAATCGTGACT | + |
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Preference number: 5 (lower is better) Translates to: IFVVVVVTNRLTLNQ*ANIRAYMPGGKIVT Trigger: AGTCACGATTTTCCCGCCTGGCATATATGCTCTTATATTTGCTCACTGGTTTAGAGTGAGTCTATTTGTAACAACAACAACAACAAAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413603.6 |
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| CDS TCA 90 bp | CAAACGAAATCATACTGCCTGTGGATTTTATCATTCAAGATGTTCTaGGTAAAGCTGTCCTTCGTAAATAAAGAGCTGTCCTTCATAAAT | + |
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Preference number: 5 (lower is better) Translates to: QTKSYCLWILSFKMF*VKLSFVNKELSFIN Trigger: ATTTATGAAGGACAGCTCTTTATTTACGAAGGACAGCTTTACTCAGAACATCTTGAATGATAAAATCCACAGGCAGTATGATTTCGTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413603.6 |
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| CDS CCA 72 bp | GCAGGTTTCTTCCCGACTTCCCCCGGAGGCCCCATGTaGCAAGTGGCACTTTACCCTCAGTCCTCAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: AGFFPTSPGGPM*QVALYPQSSAW Trigger: CCAGGCTGAGGACTGAGGGTAAAGTGCCACTTGCCACATGGGGCCTCCGGGGGAAGTCGGGAAGAAACCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000438372.1 |
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| CDS CCA 72 bp | CGTGATTCTAGCAGAGGTTGGCCAGCGTCCCTGTCCTaGGCTGCCTTTGCTGGTATTTGCGAAGGGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RDSSRGWPASLS*AAFAGICEGPP Trigger: AGGAGGCCCTTCGCAAATACCAGCAAAGGCAGCCCAGGACAGGGACGCTGGCCAACCTCTGCTAGAATCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000454424.2 ENST00000660120.1 ENST00000664401.1 ENST00000664577.1 |
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| CDS GCA 72 bp | CAGAGGTTGGCCAGCGTCCCTGTCCTGGGCTGCCTTTaGTGGTATTTGCGAAGGGCCTCCTTCACAACTAAA | + |
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Preference number: 6 (lower is better) Translates to: QRLASVPVLGCL*WYLRRASFTTK Trigger: TTTAGTTGTGAAGGAGGCCCTTCGCAAATACCAGCAAAGGCAGCCCAGGACAGGGACGCTGGCCAACCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000454424.2 ENST00000660120.1 ENST00000664401.1 ENST00000664577.1 |
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| CDS GCA 72 bp | CAGCAGTTCCTTCCTTCCCGGCGGGTGCAGTTACTTTaGCCCATCCACTGCGTAGTGCAGTTACTTCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QQFLPSRRVQLL*PIHCVVQLLLS Trigger: GGAGAGAAGTAACTGCACTACGCAGTGGATGGGGCAAAGTAACTGCACCCGCCGGGAAGGAAGGAACTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667563.1 ENST00000671670.1 |
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| CDS GCA 72 bp | TCAGGTGAGGTTCTGCTCGGCGCACTGGTGAGTGCATaGTTTCTCCCCACAGCGCTTCTCTACCTCAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SGEVLLGALVSA*FLPTALLYLKK Trigger: TTTCTTGAGGTAGAGAAGCGCTGTGGGGAGAAAGCATGCACTCACCAGTGCGCCGAGCAGAACCTCACCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413603.6 |
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| CDS GCA 72 bp | TCAGTTGGATCTGCTGCAACAATCAGACACGGAATCTaGGGGACCCTCCATCTTGGACTTCCGGCCTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SVGSAATIRHGI*GTLHLGLPASR Trigger: TCTGGAGGCCGGAAGTCCAAGATGGAGGGTCCCGCAGATTCCGTGTCTGATTGTTGCAGCAGATCCAACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000413603.6 ENST00000454424.2 ENST00000654063.1 ENST00000664401.1 ENST00000667563.1 ENST00000671670.1 |
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| CDS GCA 72 bp | CCTTCCCGGCGGGTGCAGTTACTTTGCCCCATCCACTaGGTAGTGCAGTTACTTCTCTCCATCCACTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: PSRRVQLLCPIH*VVQLLLSIHCE Trigger: TTCACAGTGGATGGAGAGAAGTAACTGCACTACGCAGTGGATGGGGCAAAGTAACTGCACCCGCCGGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667563.1 ENST00000671670.1 |
||
| CDS TCA 72 bp | TTACATATTCAGGTGAGGTTCTGCTCGGCGCACTGGTaGGTGCATGCTTTCTCCCCACAGCGCTTCTCTACC | + |
|
Preference number: 6 (lower is better) Translates to: LHIQVRFCSAHW*VHAFSPQRFST Trigger: GGTAGAGAAGCGCTGTGGGGAGAAAGCATGCACTCACCAGTGCGCCGAGCAGAACCTCACCTGAATATGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413603.6 |
||
| CDS GCA 72 bp | CTGTGTCTTCAGGGCATGGCCCTTCCTACAGCCATGTaGCCCGTGATCATTATGACGAGAGGCAGAGACAAA | + |
|
Preference number: 6 (lower is better) Translates to: LCLQGMALPTAM*PVIIMTRGRDK Trigger: TTTGTCTCTGCCTCTCGTCATAATGATCACGGGGCACATGGCTGTAGGAAGGGCCATGCCCTGAAGACACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413603.6 |
||
| CDS CCA 72 bp | AGGAAGTGCTGTGACCAATACCTGACAATGCCGGGGTaGCTTTGGAACTGGGTAACGGTTAGAGGCAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RKCCDQYLTMPG*LWNWVTVRGRE Trigger: CTCTCTGCCTCTAACCGTTACCCAGTTCCAAAGCCACCCCGGCATTGTCAGGTATTGGTCACAGCACTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413603.6 |
||
| CDS CCA 72 bp | GAAATCAGACAGGAGTCCAGGGAAGGGGTTAATGGCTaGAGTCATGAGCTCCATCACTTGCGTAAGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: EIRQESREGVNG*SHELHHLRKAR Trigger: CCTGGCCTTACGCAAGTGATGGAGCTCATGACTCCAGCCATTAACCCCTTCCCTGGACTCCTGTCTGATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671670.1 |
||
| CDS GCA 72 bp | TCATGTTGCCCACTCAGGGTTTATTTACAGGCACTTTaGCTGTGTCTTCAGGGCATGGCCCTTCCTACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SCCPLRVYLQAL*LCLQGMALPTA Trigger: GGCTGTAGGAAGGGCCATGCCCTGAAGACACAGGCAAAGTGCCTGTAAATAAACCCTGAGTGGGCAACATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413603.6 ENST00000454424.2 ENST00000660120.1 |
||
| CDS CCA 72 bp | ATGTGGCAAGTGGCACTTTACCCTCAGTCCTCAGCCTaGGGTCATGGTCCTGAGCCCTGCTTTAAAGTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: MWQVALYPQSSA*GHGPEPCFKVN Trigger: ATTCACTTTAAAGCAGGGCTCAGGACCATGACCCCAGGCTGAGGACTGAGGGTAAAGTGCCACTTGCCACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000438372.1 |
||
| CDS CCA 72 bp | CAGAGGCTTCCGATTGTAAATCTGACAATGCCGGGGTaGCTTTGGAACTGGGTAACGGTTAGAGGCAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QRLPIVNLTMPG*LWNWVTVRGRE Trigger: CTCTCTGCCTCTAACCGTTACCCAGTTCCAAAGCCACCCCGGCATTGTCAGATTTACAATCGGAAGCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665101.1 |
||
| CDS TCA 72 bp | TATGTGCTAATAGTCTGCAGACAGGCAGGGTCTGTGTaGCCTGAGGATGCATTTGGTTCAGGGGCAGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: YVLIVCRQAGSV*PEDAFGSGAER Trigger: TCTCTCTGCCCCTGAACCAAATGCATCCTCAGGTCACACAGACCCTGCCTGTCTGCAGACTATTAGCACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671670.1 |
||
| CDS TCA 72 bp | ATTTGGAGACAGATGCACACACAGGAAGAATCCACGTaGAGTCAGAGGCAGAGATTAGGACCCGTCAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: IWRQMHTQEEST*SQRQRLGPVNR Trigger: CCTGTTGACGGGTCCTAATCTCTGCCTCTGACTTCACGTGGATTCTTCCTGTGTGTGCATCTGTCTCCAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413603.6 |
||
| CDS GCA 72 bp | CTCCAGAACGGAAGTCAATGTCTGTGGTTTAGAAGCTaGCTGTTCTGTGCTTTTGTGTTGCAGGCTGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LQNGSQCLWFRS*LFCAFVLQAEW Trigger: CCACTCAGCCTGCAACACAAAAGCACAGAACAGGCAGCTTCTAAACCACAGACATTGACTTCCGTTCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000413603.6 ENST00000438372.1 ENST00000454424.2 ENST00000654063.1 ENST00000660120.1 ENST00000664401.1 ENST00000664577.1 ENST00000665101.1 ENST00000667563.1 |
||
| CDS CCA 72 bp | TGGACTTCCGGCCTCCAGAACGGAAGTCAATGTCTGTaGTTTAGAAGCTGCCTGTTCTGTGCTTTTGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WTSGLQNGSQCL*FRSCLFCAFVL Trigger: CAACACAAAAGCACAGAACAGGCAGCTTCTAAACCACAGACATTGACTTCCGTTCTGGAGGCCGGAAGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000413603.6 ENST00000438372.1 ENST00000454424.2 ENST00000654063.1 ENST00000660120.1 ENST00000664401.1 ENST00000664577.1 ENST00000665101.1 ENST00000667563.1 |
||
| CDS CCA 72 bp | CTGGGGAGGGCTCAGACGGAAATAGGAACATGCTATTaGAAAACGCAGGAGATGATCTTTGCCACAACATGG | + |
|
Preference number: 6 (lower is better) Translates to: LGRAQTEIGTCY*KTQEMIFATTW Trigger: CCATGTTGTGGCAAAGATCATCTCCTGCGTTTTCCAATAGCATGTTCCTATTTCCGTCTGAGCCCTCCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000413603.6 ENST00000654063.1 ENST00000665101.1 |
||
| CDS CAA 72 bp | CTTCTAGACCTCACAACTCTACGACAGTGGGTTTCTTaGGCTTTAAGTCCCCTGGTGTGTGTTCCTGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LLDLTTLRQWVS*ALSPLVCVPVL Trigger: GAGCACAGGAACACACACCAGGGGACTTAAAGCCAAAGAAACCCACTGTCGTAGAGTTGTGAGGTCTAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413603.6 |
||
| CDS CAA 90 bp | TGTAGGTGGCCAAGGCTAAACGTGGAACAAGATACAGGATTCTCATaGTGTGTAGGAAGGAGGCCACAAGGTGTTTATGGCAACTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: CRWPRLNVEQDTGFS*CVGRRPQGVYGNWG Trigger: ACCCCAGTTGCCATAAACACCTTGTGGCCTCCTTCCTACACACAATGAGAATCCTGTATCTTGTTCCACGTTTAGCCTTGGCCACCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667563.1 ENST00000671670.1 |
||
| CDS TCA 72 bp | TACAGCACGAGGTGTAGGTTGGCCCTGACAACACTCTaGTTTTGGACTTCTAGACCTCACAACTCTACGACA | + |
|
Preference number: 6 (lower is better) Translates to: YSTRCRLALTTL*FWTSRPHNSTT Trigger: TGTCGTAGAGTTGTGAGGTCTAGAAGTCCAAAATCAGAGTGTTGTCAGGGCCAACCTACACCTCGTGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413603.6 |
||
| CDS GCA 72 bp | GTGATTCTGGGGAGGGCTCAGACGGAAATAGGAACATaGTATTGGAAAACGCAGGAGATGATCTTTGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: VILGRAQTEIGT*YWKTQEMIFAT Trigger: TGTGGCAAAGATCATCTCCTGCGTTTTCCAATAGCATGTTCCTATTTCCGTCTGAGCCCTCCCCAGAATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000413603.6 ENST00000654063.1 ENST00000665101.1 |
||
| CDS GCA 72 bp | CCCAGGTCAGACTCTCTAGAGAGACAGCCTGGGCATTaGAGAATTCAGAAGTTGAGTAGAAACAGGCAAATC | + |
|
Preference number: 6 (lower is better) Translates to: PRSDSLERQPGH*RIQKLSRNRQI Trigger: GATTTGCCTGTTTCTACTCAACTTCTGAATTCTGCAATGCCCAGGCTGTCTCTCTAGAGAGTCTGACCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671670.1 |
||
| CDS CCA 72 bp | GACCAATACCTGACAATGCCGGGGTGGCTTTGGAACTaGGTAACGGTTAGAGGCAGAGAGAGTTTTAACATT | + |
|
Preference number: 6 (lower is better) Translates to: DQYLTMPGWLWN*VTVRGRESFNI Trigger: AATGTTAAAACTCTCTCTGCCTCTAACCGTTACCCAGTTCCAAAGCCACCCCGGCATTGTCAGGTATTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413603.6 |
||
| CDS CCA 72 bp | CAAGGTGTGCTCAGAGGCAGAGTAGATAACTACTGTTaGCTCTACTCTTTCTCCTCACCTAGGGAAGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: QGVLRGRVDNYC*LYSFSSPREAH Trigger: ATGTGCTTCCCTAGGTGAGGAGAAAGAGTAGAGCCAACAGTAGTTATCTACTCTGCCTCTGAGCACACCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667563.1 ENST00000671670.1 |
||
| CDS CCA 72 bp | ACTTTCACCATAGACGATGAATGTTCAAGTTGGCGGTaGCTCATCCCAACAGGAAGAACATGTCCACAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TFTIDDECSSWR*LIPTGRTCPQQ Trigger: CTGCTGTGGACATGTTCTTCCTGTTGGGATGAGCCACCGCCAACTTGAACATTCATCGTCTATGGTGAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667563.1 ENST00000671670.1 |
||
| CDS CAA 72 bp | TCTGGGGAGGGCTCAGACGGAAATAGGAACATGCTATaGGAAAACGCAGGAGATGATCTTTGCCACAACATG | + |
|
Preference number: 6 (lower is better) Translates to: SGEGSDGNRNML*ENAGDDLCHNM Trigger: CATGTTGTGGCAAAGATCATCTCCTGCGTTTTCCAATAGCATGTTCCTATTTCCGTCTGAGCCCTCCCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000413603.6 ENST00000654063.1 ENST00000665101.1 |
||
| CDS TCA 72 bp | CAAAACTCTCCTTCTTCACTGTTTTACATATTCAGGTaGGGTTCTGCTCGGCGCACTGGTGAGTGCATGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QNSPSSLFYIFR*GSARRTGECML Trigger: AAGCATGCACTCACCAGTGCGCCGAGCAGAACCTCACCTGAATATGTAAAACAGTGAAGAAGGAGAGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413603.6 |
||
| CDS TCA 72 bp | CTAAGAGAGATTTTGGTTCTGAGAAAGGAAGTGCTGTaGCCAATACCTGACAATGCCGGGGTGGCTTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LREILVLRKEVL*PIPDNAGVALE Trigger: TTCCAAAGCCACCCCGGCATTGTCAGGTATTGGTCACAGCACTTCCTTTCTCAGAACCAAAATCTCTCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413603.6 |
||
| CDS GCA 72 bp | TGTGGTTTAGAAGCTGCCTGTTCTGTGCTTTTGTGTTaGAGGCTGAGTGGACTAAGGGGCATATTTCATGCA | + |
|
Preference number: 6 (lower is better) Translates to: CGLEAACSVLLC*RLSGLRGIFHA Trigger: TGCATGAAATATGCCCCTTAGTCCACTCAGCCTGCAACACAAAAGCACAGAACAGGCAGCTTCTAAACCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000413603.6 ENST00000438372.1 ENST00000454424.2 ENST00000654063.1 ENST00000660120.1 ENST00000664401.1 ENST00000664577.1 ENST00000665101.1 ENST00000667563.1 |
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| CDS GCA 72 bp | ATTAAAATGGTTGGTGTATCCTTCAGTTGGATCTGCTaGAACAATCAGACACGGAATCTGCGGGACCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: IKMVGVSFSWIC*NNQTRNLRDPP Trigger: TGGAGGGTCCCGCAGATTCCGTGTCTGATTGTTGCAGCAGATCCAACTGAAGGATACACCAACCATTTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000413603.6 ENST00000454424.2 ENST00000654063.1 ENST00000664401.1 ENST00000667563.1 ENST00000671670.1 |
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| CDS CCA 72 bp | CTCATTGTGTGTAGGAAGGAGGCCACAAGGTGTTTATaGCAACTGGGGTCTGGAATATATTTGGAGGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LIVCRKEATRCL*QLGSGIYLEGE Trigger: TTCTCCCTCCAAATATATTCCAGACCCCAGTTGCCATAAACACCTTGTGGCCTCCTTCCTACACACAATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667563.1 ENST00000671670.1 |
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| CDS CAA 72 bp | TGGATTCTCATTTTGTCTGGTCTGCGGCCATTCATGTaGCCCACTCAGGGTTTATTTACAGGCACTTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: WILILSGLRPFM*PTQGLFTGTLP Trigger: AGGCAAAGTGCCTGTAAATAAACCCTGAGTGGGCAACATGAATGGCCGCAGACCAGACAAAATGAGAATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000413603.6 ENST00000454424.2 ENST00000654063.1 ENST00000660120.1 ENST00000664577.1 ENST00000665101.1 ENST00000667563.1 |
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| CDS CAA 72 bp | CCAAGGCTAAACGTGGAACAAGATACAGGATTCTCATaGTGTGTAGGAAGGAGGCCACAAGGTGTTTATGGC | + |
|
Preference number: 6 (lower is better) Translates to: PRLNVEQDTGFS*CVGRRPQGVYG Trigger: GCCATAAACACCTTGTGGCCTCCTTCCTACACACAATGAGAATCCTGTATCTTGTTCCACGTTTAGCCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667563.1 ENST00000671670.1 |
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| CDS CCA 72 bp | AGCTGCCTGTTCTGTGCTTTTGTGTTGCAGGCTGAGTaGACTAAGGGGCATATTTCATGCACTTGTTTAACT | + |
|
Preference number: 6 (lower is better) Translates to: SCLFCAFVLQAE*TKGHISCTCLT Trigger: AGTTAAACAAGTGCATGAAATATGCCCCTTAGTCCACTCAGCCTGCAACACAAAAGCACAGAACAGGCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000413603.6 ENST00000438372.1 ENST00000454424.2 ENST00000654063.1 ENST00000660120.1 ENST00000664401.1 ENST00000664577.1 ENST00000665101.1 ENST00000667563.1 |
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| CDS CCA 72 bp | TTGTGTCCGATTAAAATGGTTGGTGTATCCTTCAGTTaGATCTGCTGCAACAATCAGACACGGAATCTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LCPIKMVGVSFS*ICCNNQTRNLR Trigger: CCGCAGATTCCGTGTCTGATTGTTGCAGCAGATCCAACTGAAGGATACACCAACCATTTTAATCGGACACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000413603.6 ENST00000454424.2 ENST00000654063.1 ENST00000664401.1 ENST00000667563.1 ENST00000671670.1 |
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| CDS CCA 72 bp | GATTTTGGACTTCTAGACCTCACAACTCTACGACAGTaGGTTTCTTTGGCTTTAAGTCCCCTGGTGTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: DFGLLDLTTLRQ*VSLALSPLVCV Trigger: AACACACACCAGGGGACTTAAAGCCAAAGAAACCCACTGTCGTAGAGTTGTGAGGTCTAGAAGTCCAAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413603.6 |
||
| CDS CCA 72 bp | ATGTCTACTTTCACCATAGACGATGAATGTTCAAGTTaGCGGTGGCTCATCCCAACAGGAAGAACATGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: MSTFTIDDECSS*RWLIPTGRTCP Trigger: TGGACATGTTCTTCCTGTTGGGATGAGCCACCGCCAACTTGAACATTCATCGTCTATGGTGAAAGTAGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667563.1 ENST00000671670.1 |
||
| CDS CAA 72 bp | AATGTCTGTGGTTTAGAAGCTGCCTGTTCTGTGCTTTaGTGTTGCAGGCTGAGTGGACTAAGGGGCATATTT | + |
|
Preference number: 6 (lower is better) Translates to: NVCGLEAACSVL*CCRLSGLRGIF Trigger: AAATATGCCCCTTAGTCCACTCAGCCTGCAACACAAAAGCACAGAACAGGCAGCTTCTAAACCACAGACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000413603.6 ENST00000438372.1 ENST00000454424.2 ENST00000654063.1 ENST00000660120.1 ENST00000664401.1 ENST00000664577.1 ENST00000665101.1 ENST00000667563.1 |
||
| CDS CAA 90 bp | TTGTTTAACTGGATTCTCATTTTGTCTGGTCTGCGGCCATTCATGTaGCCCACTCAGGGTTTATTTACAGGCACTTTGCCTGTGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LFNWILILSGLRPFM*PTQGLFTGTLPVSS Trigger: TGAAGACACAGGCAAAGTGCCTGTAAATAAACCCTGAGTGGGCAACATGAATGGCCGCAGACCAGACAAAATGAGAATCCAGTTAAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000413603.6 ENST00000454424.2 ENST00000660120.1 |
||
| CDS CAA 90 bp | AGTCAATGTCTGTGGTTTAGAAGCTGCCTGTTCTGTGCTTTTGTGTaGCAGGCTGAGTGGACTAAGGGGCATATTTCATGCACTTGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SQCLWFRSCLFCAFV*QAEWTKGHISCTCL Trigger: TAAACAAGTGCATGAAATATGCCCCTTAGTCCACTCAGCCTGCAACACAAAAGCACAGAACAGGCAGCTTCTAAACCACAGACATTGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000413603.6 ENST00000438372.1 ENST00000454424.2 ENST00000654063.1 ENST00000660120.1 ENST00000664401.1 ENST00000664577.1 ENST00000665101.1 ENST00000667563.1 |
||
| CDS TCA 72 bp | GTGAGCCTTAATGAAATGCCTAAAGAAGTGCCCTTATaGAATGGGGACATTTGGAGACAGATGCACACACAG | + |
|
Preference number: 6 (lower is better) Translates to: VSLNEMPKEVPL*NGDIWRQMHTQ Trigger: CTGTGTGTGCATCTGTCTCCAAATGTCCCCATTTCATAAGGGCACTTCTTTAGGCATTTCATTAAGGCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413603.6 |
||
| CDS CCA 72 bp | TGCTGGTATTTGCGAAGGGCCTCCTTCACAACTAAATaGCTTTCTTCCTTCTCTGTTTTACACAGAGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: CWYLRRASFTTK*LSSFSVLHRAS Trigger: TGATGCTCTGTGTAAAACAGAGAAGGAAGAAAGCCATTTAGTTGTGAAGGAGGCCCTTCGCAAATACCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000454424.2 ENST00000660120.1 ENST00000664401.1 ENST00000664577.1 |
||
| CDS CCA 72 bp | ATTGTAAATCTGACAATGCCGGGGTGGCTTTGGAACTaGGTAACGGTTAGAGGCAGAGAGAGTTTTAACATT | + |
|
Preference number: 6 (lower is better) Translates to: IVNLTMPGWLWN*VTVRGRESFNI Trigger: AATGTTAAAACTCTCTCTGCCTCTAACCGTTACCCAGTTCCAAAGCCACCCCGGCATTGTCAGATTTACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665101.1 |
||
| CDS CAA 72 bp | GCATATTTCATGCACTTGTTTAACTGGATTCTCATTTaGTCTGGTCTGCGGCCATTCATGTTGCCCACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: AYFMHLFNWILI*SGLRPFMLPTQ Trigger: CTGAGTGGGCAACATGAATGGCCGCAGACCAGACAAAATGAGAATCCAGTTAAACAAGTGCATGAAATATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000413603.6 ENST00000438372.1 ENST00000454424.2 ENST00000654063.1 ENST00000660120.1 ENST00000664401.1 ENST00000664577.1 ENST00000665101.1 ENST00000667563.1 |
||
| CDS CCA 72 bp | AAATTTGAACTAACAGTGTGCTTCTGTGTCTGTAGGTaGCCAAGGCTAAACGTGGAACAAGATACAGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: KFELTVCFCVCR*PRLNVEQDTGF Trigger: GAATCCTGTATCTTGTTCCACGTTTAGCCTTGGCCACCTACAGACACAGAAGCACACTGTTAGTTCAAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667563.1 ENST00000671670.1 |
||
| CDS CAA 72 bp | ATGGCAGTTTTATGGCAAAGAAAGGGACATTCAGTATaGACTTCCATATTTTCACCAGCAGAGGCTTCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: MAVLWQRKGHSV*TSIFSPAEASD Trigger: ATCGGAAGCCTCTGCTGGTGAAAATATGGAAGTCAATACTGAATGTCCCTTTCTTTGCCATAAAACTGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000413603.6 ENST00000665101.1 |
||
| CDS CAA 90 bp | AAGGAGGCCACAAGGTGTTTATGGCAACTGGGGTCTGGAATATATTaGGAGGGAGAACTTGGCAAGTTATTGATGATTAATGTCTACTTT | + |
|
Preference number: 6 (lower is better) Translates to: KEATRCLWQLGSGIY*EGELGKLLMINVYF Trigger: AAAGTAGACATTAATCATCAATAACTTGCCAAGTTCTCCCTCCAAATATATTCCAGACCCCAGTTGCCATAAACACCTTGTGGCCTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667563.1 ENST00000671670.1 |
||
| CDS CAA 90 bp | TTCTGTGTGATGGCAGTTTTATGGCAAAGAAAGGGACATTCAGTATaGACTTCCATATTTTCACCAGCAGAGGCTTCCGATTGTAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: FCVMAVLWQRKGHSV*TSIFSPAEASDCKS Trigger: AGATTTACAATCGGAAGCCTCTGCTGGTGAAAATATGGAAGTCAATACTGAATGTCCCTTTCTTTGCCATAAAACTGCCATCACACAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000413603.6 ENST00000665101.1 |
||
| CDS CAA 90 bp | CTGGAATTCCAGTGTGTCTGTTACAAAGTGTCCATTTTAGCCTCTTaGCCTACTGCATCCTTTGAACAAGATAAAGTGGAAGAAATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LEFQCVCYKVSILAS*PTASFEQDKVEEIR Trigger: TCTGATTTCTTCCACTTTATCTTGTTCAAAGGATGCAGTAGGCAAAGAGGCTAAAATGGACACTTTGTAACAGACACACTGGAATTCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671670.1 |
||
| CDS TCA 72 bp | AAGATGCTTGCTTTTACAAAGCTCTCCAGAAGGTTCTaGAAGGTAGGTTCAGGAAGGATCAAACTGAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: KMLAFTKLSRRF*KVGSGRIKLNL Trigger: AAGATTCAGTTTGATCCTTCCTGAACCTACCTTTCAGAACCTTCTGGAGAGCTTTGTAAAAGCAAGCATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671670.1 |
||
| CDS CAA 72 bp | CAGTGTGTCTGTTACAAAGTGTCCATTTTAGCCTCTTaGCCTACTGCATCCTTTGAACAAGATAAAGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: QCVCYKVSILAS*PTASFEQDKVE Trigger: TTCCACTTTATCTTGTTCAAAGGATGCAGTAGGCAAAGAGGCTAAAATGGACACTTTGTAACAGACACACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671670.1 |
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| CDS TCA 72 bp | GTTGTTGTTGTTACAAATAGACTCACTCTAAACCAGTaGGCAAATATAAGAGCATATATGCCAGGCGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: VVVVTNRLTLNQ*ANIRAYMPGGK Trigger: TTTCCCGCCTGGCATATATGCTCTTATATTTGCTCACTGGTTTAGAGTGAGTCTATTTGTAACAACAACAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413603.6 |
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| CDS CAA 72 bp | ACAAGGTGTTTATGGCAACTGGGGTCTGGAATATATTaGGAGGGAGAACTTGGCAAGTTATTGATGATTAAT | + |
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Preference number: 6 (lower is better) Translates to: TRCLWQLGSGIY*EGELGKLLMIN Trigger: ATTAATCATCAATAACTTGCCAAGTTCTCCCTCCAAATATATTCCAGACCCCAGTTGCCATAAACACCTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000667563.1 ENST00000671670.1 |
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