Pregenerated sensors for LINC00698 (Homo sapiens)
Ensembl gene IDs: ENSG00000244342Ensembl transcript IDs: ENST00000465262.5, ENST00000465684.5, ENST00000468072.1, ENST00000475886.5, ENST00000497573.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GATATTGCTGCAGTGCCTGGGATCTGGCCCAGGGCAGGAAACACCTaGAGAAGGATGTGCTGCCTGGCACTCTGCTTCCTCACTCAGCTA | + |
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Preference number: 5 (lower is better) Translates to: DIAAVPGIWPRAGNT*RRMCCLALCFLTQL Trigger: TAGCTGAGTGAGGAAGCAGAGTGCCAGGCAGCACATCCTTCTTCAGGTGTTTCCTGCCCTGGGCCAGATCCCAGGCACTGCAGCAATATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS GCA 90 bp | TCCATCAGCTGCAGCAGCAGCTTGAAGGGGATCCGGGTGGCTCACTaGAATCACATATGGTCTAATATGTGCGCCTGGCACCTCACAGGC | + |
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Preference number: 5 (lower is better) Translates to: SISCSSSLKGIRVAH*NHIWSNMCAWHLTG Trigger: GCCTGTGAGGTGCCAGGCGCACATATTAGACCATATGTGATTGCAGTGAGCCACCCGGATCCCCTTCAAGCTGCTGCTGCAGCTGATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS GCA 90 bp | GGGCTATTTCCAGGAGCCCTAGATCATGCAGAGATATTGCTGCAGTaGCTGGGATCTGGCCCAGGGCAGGAAACACCTGAAGAAGGATGT | + |
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Preference number: 5 (lower is better) Translates to: GLFPGALDHAEILLQ*LGSGPGQETPEEGC Trigger: ACATCCTTCTTCAGGTGTTTCCTGCCCTGGGCCAGATCCCAGGCACTGCAGCAATATCTCTGCATGATCTAGGGCTCCTGGAAATAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS CCA 90 bp | GGATCTGGCCCAGGGCAGGAAACACCTGAAGAAGGATGTGCTGCCTaGCACTCTGCTTCCTCACTCAGCTATTCTTCCTTAGTGTTCACA | + |
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Preference number: 5 (lower is better) Translates to: GSGPGQETPEEGCAA*HSASSLSYSSLVFT Trigger: TGTGAACACTAAGGAAGAATAGCTGAGTGAGGAAGCAGAGTGCCAGGCAGCACATCCTTCTTCAGGTGTTTCCTGCCCTGGGCCAGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS TCA 90 bp | GAAGGCTGTCTGCCAATAGGACTTCCATCAGCTGCAGCAGCAGCTTaGAGGGGATCCGGGTGGCTCACTGCAATCACATATGGTCTAATA | + |
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Preference number: 5 (lower is better) Translates to: EGCLPIGLPSAAAAA*RGSGWLTAITYGLI Trigger: TATTAGACCATATGTGATTGCAGTGAGCCACCCGGATCCCCTTCAAGCTGCTGCTGCAGCTGATGGAAGTCCTATTGGCAGACAGCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS CCA 90 bp | AGCTATTCTTCCTTAGTGTTCACAGCTAGTGCAGAGCTCTGGTACTaGCTGCATCTGACTTCGCCAGTGACAAGGCAACTCTCTACACCC | + |
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Preference number: 5 (lower is better) Translates to: SYSSLVFTASAELWY*LHLTSPVTRQLSTP Trigger: GGGTGTAGAGAGTTGCCTTGTCACTGGCGAAGTCAGATGCAGCCAGTACCAGAGCTCTGCACTAGCTGTGAACACTAAGGAAGAATAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS CCA 90 bp | TCACTCAGCTATTCTTCCTTAGTGTTCACAGCTAGTGCAGAGCTCTaGTACTGGCTGCATCTGACTTCGCCAGTGACAAGGCAACTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SLSYSSLVFTASAEL*YWLHLTSPVTRQLS Trigger: AGAGAGTTGCCTTGTCACTGGCGAAGTCAGATGCAGCCAGTACCAGAGCTCTGCACTAGCTGTGAACACTAAGGAAGAATAGCTGAGTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS CCA 90 bp | TATGCCTATAAGCATTTCCGTGTGGCTGAGGAGGCCTCACAATTATaGCAGAAGGCAAGGAGCAGCAAGTCACATATCACGTGGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: YAYKHFRVAEEASQL*QKARSSKSHITWMA Trigger: TGCCATCCACGTGATATGTGACTTGCTGCTCCTTGCCTTCTGCCATAATTGTGAGGCCTCCTCAGCCACACGGAAATGCTTATAGGCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475886.5 |
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| CDS TCA 90 bp | TCCTCAAAGTGCAGAGAACTCAGACTGAAACCAGTGGACACAGACTaGATGAGCCTCAGGAAACCAAGACAATCAGATGAGACCCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: SSKCRELRLKPVDTD*MSLRKPRQSDETLL Trigger: GAGCAGGGTCTCATCTGATTGTCTTGGTTTCCTGAGGCTCATTCAGTCTGTGTCCACTGGTTTCAGTCTGAGTTCTCTGCACTTTGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS TCA 90 bp | AGGTCAGATGAGTATCATAGGCAGCCTTTAGCACTGGAAGAGACCTaGTATGCCATATGCTTGTCTTTCTTCCCTCCTTCCATCCTATCT | + |
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Preference number: 5 (lower is better) Translates to: RSDEYHRQPLALEET*YAICLSFFPPSILS Trigger: AGATAGGATGGAAGGAGGGAAGAAAGACAAGCATATGGCATATCAGGTCTCTTCCAGTGCTAAAGGCTGCCTATGATACTCATCTGACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000465684.5 ENST00000468072.1 ENST00000475886.5 |
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| CDS GCA 90 bp | GTCTTCCAGCTTCTGCTTACACAACCTTTCTTAGGTCTCAAACCTTaGTTGGATGAGTCATTTTCTCTCTCTGAGACTCAGCTTCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: VFQLLLTQPFLGLKP*LDESFSLSETQLLV Trigger: GACAAGAAGCTGAGTCTCAGAGAGAGAAAATGACTCATCCAAGCAAGGTTTGAGACCTAAGAAAGGTTGTGTAAGCAGAAGCTGGAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS GCA 90 bp | CGTCCTGGGACAGCCAGTTCATGGGGTAGGACCACCAAGACTGTATaGTTTACAAGAAGATACAATTGTCTTTGTAACTCAGCAATCAAA | + |
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Preference number: 5 (lower is better) Translates to: RPGTASSWGRTTKTV*FTRRYNCLCNSAIK Trigger: TTTGATTGCTGAGTTACAAAGACAATTGTATCTTCTTGTAAAGCATACAGTCTTGGTGGTCCTACCCCATGAACTGGCTGTCCCAGGACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000465262.5 ENST00000475886.5 |
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| CDS TCA 90 bp | TCTTTCTTCCCTCCTTCCATCCTATCTCATGCTTCATTTCTTGAATaGATGCTCTTTTCAAGGGTCTTCCAGCTTCTGCTTACACAACCC | + |
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Preference number: 5 (lower is better) Translates to: SFFPPSILSHASFLE*MLFSRVFQLLLTQP Trigger: GGGTTGTGTAAGCAGAAGCTGGAAGACCCTTGAAAAGAGCATTCATTCAAGAAATGAAGCATGAGATAGGATGGAAGGAGGGAAGAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000475886.5 |
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| CDS TCA 90 bp | GATATTACAAGTTCTGCTTCAGTGTTTCTCCAGCAACCAGCTACGTaGTGCCCATCAATTACTATCTCCAAGGTTTTCTATCCAGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: DITSSASVFLQQPAT*CPSITISKVFYPGH Trigger: ATGACCTGGATAGAAAACCTTGGAGATAGTAATTGATGGGCATCACGTAGCTGGTTGCTGGAGAAACACTGAAGCAGAACTTGTAATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468072.1 |
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| CDS TCA 90 bp | TCTTTCTTCCCTCCTTCCATCCTATCTCATGCTTCATTTCTTGAATaGATGCTCTTTTCAAGGGTCTTCCAGCTTCTGCTTACACAACCT | + |
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Preference number: 5 (lower is better) Translates to: SFFPPSILSHASFLE*MLFSRVFQLLLTQP Trigger: AGGTTGTGTAAGCAGAAGCTGGAAGACCCTTGAAAAGAGCATTCATTCAAGAAATGAAGCATGAGATAGGATGGAAGGAGGGAAGAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS TCA 72 bp | GCAGTGCCTGGGATCTGGCCCAGGGCAGGAAACACCTaGAGAAGGATGTGCTGCCTGGCACTCTGCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: AVPGIWPRAGNT*RRMCCLALCFL Trigger: GAGGAAGCAGAGTGCCAGGCAGCACATCCTTCTTCAGGTGTTTCCTGCCCTGGGCCAGATCCCAGGCACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS GCA 72 bp | GAGAGAAGGCTGTCTGCCAATAGGACTTCCATCAGCTaGAGCAGCAGCTTGAAGGGGATCCGGGTGGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: ERRLSANRTSIS*SSSLKGIRVAH Trigger: GTGAGCCACCCGGATCCCCTTCAAGCTGCTGCTGCAGCTGATGGAAGTCCTATTGGCAGACAGCCTTCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS TCA 72 bp | GATCAGCCATTGGTTGTGAGTCCCCAGGGAAGGGTGTaGTCTTGGGGAAGGCAGCTCTCTGCAACTGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: DQPLVVSPQGRV*SWGRQLSATEA Trigger: TGCCTCAGTTGCAGAGAGCTGCCTTCCCCAAGATCACACCCTTCCCTGGGGACTCACAACCAATGGCTGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS CAA 72 bp | GGGCTATTTCCAGGAGCCCTAGATCATGCAGAGATATaGCTGCAGTGCCTGGGATCTGGCCCAGGGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: GLFPGALDHAEI*LQCLGSGPGQE Trigger: TTCCTGCCCTGGGCCAGATCCCAGGCACTGCAGCAATATCTCTGCATGATCTAGGGCTCCTGGAAATAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS GCA 72 bp | TGCAGCAGCAGCTTGAAGGGGATCCGGGTGGCTCACTaGAATCACATATGGTCTAATATGTGCGCCTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: CSSSLKGIRVAH*NHIWSNMCAWH Trigger: GTGCCAGGCGCACATATTAGACCATATGTGATTGCAGTGAGCCACCCGGATCCCCTTCAAGCTGCTGCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS CCA 72 bp | TGTCTCCTTCATGCCCTCCCTACTCTGATTGACAGCTaGGGGAACAGAACACTTGAGCTCCTGGCTGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: CLLHALPTLIDS*GNRTLELLAGL Trigger: AAGCCCAGCCAGGAGCTCAAGTGTTCTGTTCCCCCAGCTGTCAATCAGAGTAGGGAGGGCATGAAGGAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497573.1 |
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| CDS CAA 90 bp | GCCCTTAATGGGCTATTTCCAGGAGCCCTAGATCATGCAGAGATATaGCTGCAGTGCCTGGGATCTGGCCCAGGGCAGGAAACACCTGAA | + |
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Preference number: 6 (lower is better) Translates to: ALNGLFPGALDHAEI*LQCLGSGPGQETPE Trigger: TTCAGGTGTTTCCTGCCCTGGGCCAGATCCCAGGCACTGCAGCAATATCTCTGCATGATCTAGGGCTCCTGGAAATAGCCCATTAAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS CAA 72 bp | TCTGCCAATAGGACTTCCATCAGCTGCAGCAGCAGCTaGAAGGGGATCCGGGTGGCTCACTGCAATCACATA | + |
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Preference number: 6 (lower is better) Translates to: SANRTSISCSSS*KGIRVAHCNHI Trigger: TATGTGATTGCAGTGAGCCACCCGGATCCCCTTCAAGCTGCTGCTGCAGCTGATGGAAGTCCTATTGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS CCA 72 bp | TTGAAGGGGATCCGGGTGGCTCACTGCAATCACATATaGTCTAATATGTGCGCCTGGCACCTCACAGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: LKGIRVAHCNHI*SNMCAWHLTGN Trigger: ATTGCCTGTGAGGTGCCAGGCGCACATATTAGACCATATGTGATTGCAGTGAGCCACCCGGATCCCCTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS CAA 90 bp | AGAAGGCTGTCTGCCAATAGGACTTCCATCAGCTGCAGCAGCAGCTaGAAGGGGATCCGGGTGGCTCACTGCAATCACATATGGTCTAAT | + |
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Preference number: 6 (lower is better) Translates to: RRLSANRTSISCSSS*KGIRVAHCNHIWSN Trigger: ATTAGACCATATGTGATTGCAGTGAGCCACCCGGATCCCCTTCAAGCTGCTGCTGCAGCTGATGGAAGTCCTATTGGCAGACAGCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS CCA 72 bp | TATTCTTCCTTAGTGTTCACAGCTAGTGCAGAGCTCTaGTACTGGCTGCATCTGACTTCGCCAGTGACAAGG | + |
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Preference number: 6 (lower is better) Translates to: YSSLVFTASAEL*YWLHLTSPVTR Trigger: CCTTGTCACTGGCGAAGTCAGATGCAGCCAGTACCAGAGCTCTGCACTAGCTGTGAACACTAAGGAAGAATA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS CCA 72 bp | TGGCCCACTCTCTCTCTCATCACTCAGCAGATTCACTaGGCTTATTCACAAAGGGTAAGCAGAGTCCGTAGT | + |
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Preference number: 6 (lower is better) Translates to: WPTLSLITQQIH*AYSQRVSRVRS Trigger: ACTACGGACTCTGCTTACCCTTTGTGAATAAGCCCAGTGAATCTGCTGAGTGATGAGAGAGAGAGTGGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465262.5 |
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| CDS TCA 72 bp | GAGTATCATAGGCAGCCTTTAGCACTGGAAGAGACCTaGTATGCCATATGCTTGTCTTTCTTCCCTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: EYHRQPLALEET*YAICLSFFPPS Trigger: GGAAGGAGGGAAGAAAGACAAGCATATGGCATATCAGGTCTCTTCCAGTGCTAAAGGCTGCCTATGATACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000465684.5 ENST00000468072.1 ENST00000475886.5 |
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| CDS TCA 72 bp | TGCAGAGAACTCAGACTGAAACCAGTGGACACAGACTaGATGAGCCTCAGGAAACCAAGACAATCAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: CRELRLKPVDTD*MSLRKPRQSDE Trigger: CTCATCTGATTGTCTTGGTTTCCTGAGGCTCATTCAGTCTGTGTCCACTGGTTTCAGTCTGAGTTCTCTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS CCA 72 bp | GCTGTCCTAAATTGGGCTGAAATGATACGGGCTTTATaGATTCTTCTGGATCAGCCATTGGTTGTGAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: AVLNWAEMIRAL*ILLDQPLVVSP Trigger: GGGACTCACAACCAATGGCTGATCCAGAAGAATCCATAAAGCCCGTATCATTTCAGCCCAATTTAGGACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS CCA 72 bp | AAAGGGAAGAAAGAAGAAGTGGGTAGAAGGAGAGGTTaGGCTGCATGTAGGTCTAATGGCTCAACAAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: KGKKEEVGRRRG*AACRSNGSTKL Trigger: CAGCTTTGTTGAGCCATTAGACCTACATGCAGCCCAACCTCTCCTTCTACCCACTTCTTCTTTCTTCCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS CCA 72 bp | TGGCCCACTCTCTCTCTCATCACTCAGCAGATTCACTaGGCTTATTCACAAAGGGTAAGCAGAGTCCTAATA | + |
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Preference number: 6 (lower is better) Translates to: WPTLSLITQQIH*AYSQRVSRVLI Trigger: TATTAGGACTCTGCTTACCCTTTGTGAATAAGCCCAGTGAATCTGCTGAGTGATGAGAGAGAGAGTGGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475886.5 |
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| CDS CAA 72 bp | GCTTATTCACAAAGGGTAAGCAGAGTCCGTAGTTCGTaGACCTCTGATGTAGGAGCTTGTTACCCAAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: AYSQRVSRVRSS*TSDVGACYPKW Trigger: CCACTTTGGGTAACAAGCTCCTACATCAGAGGTCAACGAACTACGGACTCTGCTTACCCTTTGTGAATAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465262.5 |
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| CDS TCA 72 bp | TCTCTGAGACTCAGCTTCTTGTCTGAGTATGGAGTGTaGCTTGAGCATCAGGATTTTCAAAAGCTCCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SLRLSFLSEYGV*LEHQDFQKLPG Trigger: TCCTGGGAGCTTTTGAAAATCCTGATGCTCAAGTCACACTCCATACTCAGACAAGAAGCTGAGTCTCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468072.1 |
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| CDS CAA 90 bp | TTCCAGCTTCTGCTTACACAACCTTTCTTAGGTCTCAAACCTTGCTaGGATGAGTCATTTTCTCTCTCTGAGACTCAGCTTCTTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: FQLLLTQPFLGLKPC*DESFSLSETQLLVP Trigger: TGGGACAAGAAGCTGAGTCTCAGAGAGAGAAAATGACTCATCCAAGCAAGGTTTGAGACCTAAGAAAGGTTGTGTAAGCAGAAGCTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465684.5 |
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| CDS GCA 72 bp | TTCAAGGGTCTTCCAGCTTCTGCTTACACAACCCCATaGAGTGTTTCTGATGCTTTTATCTTCCTGTATCCA | + |
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Preference number: 6 (lower is better) Translates to: FKGLPASAYTTP*SVSDAFIFLYP Trigger: TGGATACAGGAAGATAAAAGCATCAGAAACACTGCATGGGGTTGTGTAAGCAGAAGCTGGAAGACCCTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000475886.5 |
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| CDS CAA 72 bp | CAGGTATTGCAGAAATCTTCACCAATCTTGGCTTCTTaGTCAGCTTCTATCAGCCAGAAGGTCCTCAGTACA | + |
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Preference number: 6 (lower is better) Translates to: QVLQKSSPILAS*SASISQKVLST Trigger: TGTACTGAGGACCTTCTGGCTGATAGAAGCTGACAAAGAAGCCAAGATTGGTGAAGATTTCTGCAATACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000468072.1 ENST00000497573.1 |
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| CDS TCA 72 bp | AGTTCTGCTTCAGTGTTTCTCCAGCAACCAGCTACGTaGTGCCCATCAATTACTATCTCCAAGGTTTTCTAT | + |
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Preference number: 6 (lower is better) Translates to: SSASVFLQQPAT*CPSITISKVFY Trigger: ATAGAAAACCTTGGAGATAGTAATTGATGGGCATCACGTAGCTGGTTGCTGGAGAAACACTGAAGCAGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468072.1 |
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| CDS GCA 72 bp | CTTCTGCTTACACAACCTTTCTTAGGTCTCAAACCTTaGTTGGATGAGTCATTTTCTCTCTCTGAGACTCAG | + |
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Preference number: 6 (lower is better) Translates to: LLLTQPFLGLKP*LDESFSLSETQ Trigger: CTGAGTCTCAGAGAGAGAAAATGACTCATCCAAGCAAGGTTTGAGACCTAAGAAAGGTTGTGTAAGCAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS CCA 72 bp | CAATTACATCTCCAAAATAGATGTCCCAATTGCCAGTaGGGATGTCTAAAACCAGGAAGCTGCAGTCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: QLHLQNRCPNCQ*GCLKPGSCSLN Trigger: ATTCAGACTGCAGCTTCCTGGTTTTAGACATCCCCACTGGCAATTGGGACATCTATTTTGGAGATGTAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000465262.5 ENST00000468072.1 ENST00000497573.1 |
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| CDS CAA 72 bp | CTGCTTACACAACCTTTCTTAGGTCTCAAACCTTGCTaGGATGAGTCATTTTCTCTCTCTGAGACTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: LLTQPFLGLKPC*DESFSLSETQL Trigger: AAGCTGAGTCTCAGAGAGAGAAAATGACTCATCCAAGCAAGGTTTGAGACCTAAGAAAGGTTGTGTAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000465684.5 ENST00000468072.1 |
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| CDS GCA 72 bp | ACAGCCAGTTCATGGGGTAGGACCACCAAGACTGTATaGTTTACAAGAAGATACAATTGTCTTTGTAACTCA | + |
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Preference number: 6 (lower is better) Translates to: TASSWGRTTKTV*FTRRYNCLCNS Trigger: TGAGTTACAAAGACAATTGTATCTTCTTGTAAAGCATACAGTCTTGGTGGTCCTACCCCATGAACTGGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000465262.5 ENST00000475886.5 |
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| CDS GCA 72 bp | TCATTTTCTCTCTCTGAGACTCAGCTTCTTGTCCCATaGAGTGTTTCTGATGCTTTTATCTTCCTGTATCCA | + |
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Preference number: 6 (lower is better) Translates to: SFSLSETQLLVP*SVSDAFIFLYP Trigger: TGGATACAGGAAGATAAAAGCATCAGAAACACTGCATGGGACAAGAAGCTGAGTCTCAGAGAGAGAAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000465684.5 |
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| CDS CAA 90 bp | TTAGAAACTCAGGTATTGCAGAAATCTTCACCAATCTTGGCTTCTTaGTCAGCTTCTATCAGCCAGAAGGTCCTCAGTACATTCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: LETQVLQKSSPILAS*SASISQKVLSTFFS Trigger: ACTGAAGAATGTACTGAGGACCTTCTGGCTGATAGAAGCTGACAAAGAAGCCAAGATTGGTGAAGATTTCTGCAATACCTGAGTTTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000468072.1 ENST00000497573.1 |
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| CDS CCA 72 bp | GAGACATTTACTCCCTGGAGTCTAATAACAGCAAAGTaGCAGAAAAGCCTCATCATTAGGCTATCTTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: ETFTPWSLITAK*QKSLIIRLSFD Trigger: ATCAAAAGATAGCCTAATGATGAGGCTTTTCTGCCACTTTGCTGTTATTAGACTCCAGGGAGTAAATGTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497573.1 |
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| CDS CAA 72 bp | CATCTTCAACATAACCACTCTAATATTTGGGGAATGTaGGAGCCGAATTTCTCTTGGATCCGATTTTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: HLQHNHSNIWGM*EPNFSWIRFSL Trigger: GAGAGAAAATCGGATCCAAGAGAAATTCGGCTCCAACATTCCCCAAATATTAGAGTGGTTATGTTGAAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468072.1 |
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| CDS TCA 72 bp | TCAGAAGCATTTCTGATTCCTGGCCTTCACTTGTTTTaGAGATATTACAAGTTCTGCTTCAGTGTTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SEAFLIPGLHLF*RYYKFCFSVSP Trigger: TGGAGAAACACTGAAGCAGAACTTGTAATATCTTCAAAACAAGTGAAGGCCAGGAATCAGAAATGCTTCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468072.1 |
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| CDS CCA 72 bp | ATCTTCAACATAACCACTCTAATATTTGGGGAATGTTaGAGCCGAATTTCTCTTGGATCCGATTTTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: IFNITTLIFGEC*SRISLGSDFLS Trigger: AGAGAGAAAATCGGATCCAAGAGAAATTCGGCTCCAACATTCCCCAAATATTAGAGTGGTTATGTTGAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468072.1 |
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