Pregenerated sensors for LINC00691 (Homo sapiens)
Ensembl gene IDs: ENSG00000224074Ensembl transcript IDs: ENST00000432505.1, ENST00000436123.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCACCTCTCCAGGAGGGAGGGCTCACCTCTCGCCCAGGCAACTGTaGTGGCCTCCAGCTGGGTCCCCCGACTCCAGGCTGTCCCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTSPGGRAHLSPRQL*WPPAGSPDSRLSPL Trigger: CAAGGGGGACAGCCTGGAGTCGGGGGACCCAGCTGGAGGCCAGCACAGTTGCCTGGGCGAGAGGTGAGCCCTCCCTCCTGGAGAGGTGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 90 bp | ACCTCTCCAGGAGGGAGGGCTCACCTCTCGCCCAGGCAACTGTGCTaGCCTCCAGCTGGGTCCCCCGACTCCAGGCTGTCCCCCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TSPGGRAHLSPRQLC*PPAGSPDSRLSPLD Trigger: ATCCAAGGGGGACAGCCTGGAGTCGGGGGACCCAGCTGGAGGCCAGCACAGTTGCCTGGGCGAGAGGTGAGCCCTCCCTCCTGGAGAGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 90 bp | AGGGAGGGCTCACCTCTCGCCCAGGCAACTGTGCTGGCCTCCAGCTaGGTCCCCCGACTCCAGGCTGTCCCCCTTGGATCCGTCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: REGSPLAQATVLASS*VPRLQAVPLGSVFS Trigger: AGAGAAGACGGATCCAAGGGGGACAGCCTGGAGTCGGGGGACCCAGCTGGAGGCCAGCACAGTTGCCTGGGCGAGAGGTGAGCCCTCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 90 bp | TGTGCTGGCCTCCAGCTGGGTCCCCCGACTCCAGGCTGTCCCCCTTaGATCCGTCTTCTCTGTTCAGAGTCTCTTATCTCTGTGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: CAGLQLGPPTPGCPP*IRLLCSESLISVLI Trigger: TATCAGCACAGAGATAAGAGACTCTGAACAGAGAAGACGGATCCAAGGGGGACAGCCTGGAGTCGGGGGACCCAGCTGGAGGCCAGCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS GCA 90 bp | CCACAGTCTCGACTCTGCCTTCATGCACTCGTAGCCCAGAATCCCTaGAGGGGCTGGTGTGCGTTTCCCATGCTTGCTGATCCTGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: PQSRLCLHALVAQNP*RGWCAFPMLADPAY Trigger: ATATGCAGGATCAGCAAGCATGGGAAACGCACACCAGCCCCTGCAGGGATTCTGGGCTACGAGTGCATGAAGGCAGAGTCGAGACTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS GCA 90 bp | AAGGGGATTCTTCTTCCAGAATCCACAGTCTCGACTCTGCCTTCATaGACTCGTAGCCCAGAATCCCTGCAGGGGCTGGTGTGCGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KGILLPESTVSTLPS*TRSPESLQGLVCVS Trigger: GGAAACGCACACCAGCCCCTGCAGGGATTCTGGGCTACGAGTGCATGAAGGCAGAGTCGAGACTGTGGATTCTGGAAGAAGAATCCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS GCA 90 bp | GCTCTCTCAAGGGGATTCTTCTTCCAGAATCCACAGTCTCGACTCTaGCTTCATGCACTCGTAGCCCAGAATCCCTGCAGGGGCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ALSRGFFFQNPQSRL*LHALVAQNPCRGWC Trigger: ACACCAGCCCCTGCAGGGATTCTGGGCTACGAGTGCATGAAGGCAGAGTCGAGACTGTGGATTCTGGAAGAAGAATCCCCTTGAGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 90 bp | CGACTCTGCCTTCATGCACTCGTAGCCCAGAATCCCTGCAGGGGCTaGTGTGCGTTTCCCATGCTTGCTGATCCTGCATATATACTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLCLHALVAQNPCRG*CAFPMLADPAYILC Trigger: ACAAAGTATATATGCAGGATCAGCAAGCATGGGAAACGCACACCAGCCCCTGCAGGGATTCTGGGCTACGAGTGCATGAAGGCAGAGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 90 bp | CTGCTAGATAGGCATGTGTTGATCACAGGTAGAAAGGGCTGCCAATaGAACAGCAAGCCAAGGCCGATGGTAATGAGTCAGGGGTTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LLDRHVLITGRKGCQ*NSKPRPMVMSQGFP Trigger: CGGAAACCCCTGACTCATTACCATCGGCCTTGGCTTGCTGTTCCATTGGCAGCCCTTTCTACCTGTGATCAACACATGCCTATCTAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 90 bp | CAGGTTCTGGAGTGGAGACTGGATCCAGTTGCTTATCGGGAGCTCTaGGAAGGGATGGGGCCCAGTCTATTATTGTCACCAGAAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QVLEWRLDPVAYREL*EGMGPSLLLSPEKK Trigger: CTTCTTTTCTGGTGACAATAATAGACTGGGCCCCATCCCTTCCCAGAGCTCCCGATAAGCAACTGGATCCAGTCTCCACTCCAGAACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS GCA 90 bp | AGTATGCTGCTAGATAGGCATGTGTTGATCACAGGTAGAAAGGGCTaGCAATGGAACAGCAAGCCAAGGCCGATGGTAATGAGTCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SMLLDRHVLITGRKG*QWNSKPRPMVMSQG Trigger: CCCCTGACTCATTACCATCGGCCTTGGCTTGCTGTTCCATTGGCAGCCCTTTCTACCTGTGATCAACACATGCCTATCTAGCAGCATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 90 bp | CCAGCAGTAGCTGTATTGAGCAAAAAGTCCATTCAGGTTCTGGAGTaGAGACTGGATCCAGTTGCTTATCGGGAGCTCTGGGAAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PAVAVLSKKSIQVLE*RLDPVAYRELWEGM Trigger: CATCCCTTCCCAGAGCTCCCGATAAGCAACTGGATCCAGTCTCCACTCCAGAACCTGAATGGACTTTTTGCTCAATACAGCTACTGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 90 bp | AGTGGAGACTGGATCCAGTTGCTTATCGGGAGCTCTGGGAAGGGATaGGGCCCAGTCTATTATTGTCACCAGAAAAGAAGCATACGAACT | + |
|
Preference number: 5 (lower is better) Translates to: SGDWIQLLIGSSGKG*GPVYYCHQKRSIRT Trigger: AGTTCGTATGCTTCTTTTCTGGTGACAATAATAGACTGGGCCCCATCCCTTCCCAGAGCTCCCGATAAGCAACTGGATCCAGTCTCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 90 bp | AAGATGGAATGGAAGACCTCTTGGCACATGTCCCATGAAGCTGACTaGCCAGCAGTAGCTGTATTGAGCAAAAAGTCCATTCAGGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KMEWKTSWHMSHEAD*PAVAVLSKKSIQVL Trigger: CAGAACCTGAATGGACTTTTTGCTCAATACAGCTACTGCTGGCCAGTCAGCTTCATGGGACATGTGCCAAGAGGTCTTCCATTCCATCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS TCA 90 bp | CCTGTGTTTCTTCCTCTCTGGTCACTGAATCTGTGGATGATGCAATaGCAGGACGCCGACATTCTAAAACTTATTAACTCTGGGCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PVFLPLWSLNLWMMQ*QDADILKLINSGRM Trigger: CATCCGCCCAGAGTTAATAAGTTTTAGAATGTCGGCGTCCTGTCATTGCATCATCCACAGATTCAGTGACCAGAGAGGAAGAAACACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS GCA 90 bp | CTCCTTAGGCTCCATTTTTCTAGAACTCGTTGCTACCCAAAGGTTTaGTGTGTGGGCCCAAGGCTTTGGTTTCATCTGCTCTCACATAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLRLHFSRTRCYPKV*CVGPRLWFHLLSHN Trigger: ATTATGTGAGAGCAGATGAAACCAAAGCCTTGGGCCCACACAGCAAACCTTTGGGTAGCAACGAGTTCTAGAAAAATGGAGCCTAAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432505.1 |
||
| CDS CCA 90 bp | GGCTCCATTTTTCTAGAACTCGTTGCTACCCAAAGGTTTGCTGTGTaGGCCCAAGGCTTTGGTTTCATCTGCTCTCACATAATGGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GSIFLELVATQRFAV*AQGFGFICSHIMEV Trigger: AACTTCCATTATGTGAGAGCAGATGAAACCAAAGCCTTGGGCCCACACAGCAAACCTTTGGGTAGCAACGAGTTCTAGAAAAATGGAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432505.1 |
||
| CDS GCA 90 bp | TGCAGAGGACTGGGTAGTTGCTACACTTTTCTTCTTCCCACCATCTaGTCCTACTACCTTCCAGGTAACATATACCTCACATTGTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: CRGLGSCYTFLLPTI*SYYLPGNIYLTLSY Trigger: ATATGACAATGTGAGGTATATGTTACCTGGAAGGTAGTAGGAGCAGATGGTGGGAAGAAGAAAAGTGTAGCAACTACCCAGTCCTCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS TCA 90 bp | GACTTTATAATTTGGCTTCATCCCACACATATTCCCACTGCTCCCTaGAATGCTCCCTTACTGTTTTGTTGGGAATCTTGTTCTGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: DFIIWLHPTHIPTAP*NAPLLFCWESCSDL Trigger: AAGATCAGAACAAGATTCCCAACAAAACAGTAAGGGAGCATTTCAGGGAGCAGTGGGAATATGTGTGGGATGAAGCCAAATTATAAAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432505.1 |
||
| CDS TCA 90 bp | CTGACAGGCATTGATAATACAGCAGGAACCAAACACTCTTTGAAATaGATATATGCCCTCAACATTTGCATAAATACATGGAGCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LTGIDNTAGTKHSLK*IYALNICINTWSSI Trigger: AATGGAGCTCCATGTATTTATGCAAATGTTGAGGGCATATATTCATTTCAAAGAGTGTTTGGTTCCTGCTGTATTATCAATGCCTGTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432505.1 |
||
| CDS GCA 90 bp | AACATTTGCATAAATACATGGAGCTCCATTTATAGTTCCTTGGGCTaGTGGCAGTTCATTCTATATAGACTTTGGAAGCCCTTTAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: NICINTWSSIYSSLG*WQFILYRLWKPFKV Trigger: TACTTTAAAGGGCTTCCAAAGTCTATATAGAATGAACTGCCAGCAGCCCAAGGAACTATAAATGGAGCTCCATGTATTTATGCAAATGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432505.1 |
||
| CDS CCA 90 bp | ATTTGCATAAATACATGGAGCTCCATTTATAGTTCCTTGGGCTGCTaGCAGTTCATTCTATATAGACTTTGGAAGCCCTTTAAAGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: ICINTWSSIYSSLGC*QFILYRLWKPFKVM Trigger: CATTACTTTAAAGGGCTTCCAAAGTCTATATAGAATGAACTGCCAGCAGCCCAAGGAACTATAAATGGAGCTCCATGTATTTATGCAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432505.1 |
||
| CDS CCA 72 bp | GGAGGGAGGGCTCACCTCTCGCCCAGGCAACTGTGCTaGCCTCCAGCTGGGTCCCCCGACTCCAGGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GGRAHLSPRQLC*PPAGSPDSRLS Trigger: GGACAGCCTGGAGTCGGGGGACCCAGCTGGAGGCCAGCACAGTTGCCTGGGCGAGAGGTGAGCCCTCCCTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 72 bp | TCACCTCTCGCCCAGGCAACTGTGCTGGCCTCCAGCTaGGTCCCCCGACTCCAGGCTGTCCCCCTTGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: SPLAQATVLASS*VPRLQAVPLGS Trigger: GGATCCAAGGGGGACAGCCTGGAGTCGGGGGACCCAGCTGGAGGCCAGCACAGTTGCCTGGGCGAGAGGTGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CAA 90 bp | CTGTGCTGGCCTCCAGCTGGGTCCCCCGACTCCAGGCTGTCCCCCTaGGATCCGTCTTCTCTGTTCAGAGTCTCTTATCTCTGTGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LCWPPAGSPDSRLSP*DPSSLFRVSYLCAD Trigger: ATCAGCACAGAGATAAGAGACTCTGAACAGAGAAGACGGATCCAAGGGGGACAGCCTGGAGTCGGGGGACCCAGCTGGAGGCCAGCACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS GCA 72 bp | CGACTCTGCCTTCATGCACTCGTAGCCCAGAATCCCTaGAGGGGCTGGTGTGCGTTTCCCATGCTTGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: RLCLHALVAQNP*RGWCAFPMLAD Trigger: ATCAGCAAGCATGGGAAACGCACACCAGCCCCTGCAGGGATTCTGGGCTACGAGTGCATGAAGGCAGAGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 72 bp | CTCCAGCTGGGTCCCCCGACTCCAGGCTGTCCCCCTTaGATCCGTCTTCTCTGTTCAGAGTCTCTTATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LQLGPPTPGCPP*IRLLCSESLIS Trigger: AGAGATAAGAGACTCTGAACAGAGAAGACGGATCCAAGGGGGACAGCCTGGAGTCGGGGGACCCAGCTGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS GCA 72 bp | CTTCTTCCAGAATCCACAGTCTCGACTCTGCCTTCATaGACTCGTAGCCCAGAATCCCTGCAGGGGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLPESTVSTLPS*TRSPESLQGLV Trigger: CACCAGCCCCTGCAGGGATTCTGGGCTACGAGTGCATGAAGGCAGAGTCGAGACTGTGGATTCTGGAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 72 bp | CTTCATGCACTCGTAGCCCAGAATCCCTGCAGGGGCTaGTGTGCGTTTCCCATGCTTGCTGATCCTGCATAT | + |
|
Preference number: 6 (lower is better) Translates to: LHALVAQNPCRG*CAFPMLADPAY Trigger: ATATGCAGGATCAGCAAGCATGGGAAACGCACACCAGCCCCTGCAGGGATTCTGGGCTACGAGTGCATGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS GCA 72 bp | AGGGGATTCTTCTTCCAGAATCCACAGTCTCGACTCTaGCTTCATGCACTCGTAGCCCAGAATCCCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RGFFFQNPQSRL*LHALVAQNPCR Trigger: CCTGCAGGGATTCTGGGCTACGAGTGCATGAAGGCAGAGTCGAGACTGTGGATTCTGGAAGAAGAATCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 72 bp | GAGTGGAGACTGGATCCAGTTGCTTATCGGGAGCTCTaGGAAGGGATGGGGCCCAGTCTATTATTGTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: EWRLDPVAYREL*EGMGPSLLLSP Trigger: TGGTGACAATAATAGACTGGGCCCCATCCCTTCCCAGAGCTCCCGATAAGCAACTGGATCCAGTCTCCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 72 bp | AGGCATGTGTTGATCACAGGTAGAAAGGGCTGCCAATaGAACAGCAAGCCAAGGCCGATGGTAATGAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RHVLITGRKGCQ*NSKPRPMVMSQ Trigger: CTGACTCATTACCATCGGCCTTGGCTTGCTGTTCCATTGGCAGCCCTTTCTACCTGTGATCAACACATGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 72 bp | TGGATCCAGTTGCTTATCGGGAGCTCTGGGAAGGGATaGGGCCCAGTCTATTATTGTCACCAGAAAAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: WIQLLIGSSGKG*GPVYYCHQKRS Trigger: GCTTCTTTTCTGGTGACAATAATAGACTGGGCCCCATCCCTTCCCAGAGCTCCCGATAAGCAACTGGATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS GCA 72 bp | TCTGGACTCCTTAGGCTCCATTTTTCTAGAACTCGTTaGTACCCAAAGGTTTGCTGTGTGGGCCCAAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SGLLRLHFSRTR*YPKVCCVGPRL Trigger: AAGCCTTGGGCCCACACAGCAAACCTTTGGGTAGCAACGAGTTCTAGAAAAATGGAGCCTAAGGAGTCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS GCA 72 bp | CTAGATAGGCATGTGTTGATCACAGGTAGAAAGGGCTaGCAATGGAACAGCAAGCCAAGGCCGATGGTAATG | + |
|
Preference number: 6 (lower is better) Translates to: LDRHVLITGRKG*QWNSKPRPMVM Trigger: CATTACCATCGGCCTTGGCTTGCTGTTCCATTGGCAGCCCTTTCTACCTGTGATCAACACATGCCTATCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 72 bp | GCTGTATTGAGCAAAAAGTCCATTCAGGTTCTGGAGTaGAGACTGGATCCAGTTGCTTATCGGGAGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AVLSKKSIQVLE*RLDPVAYRELW Trigger: CCAGAGCTCCCGATAAGCAACTGGATCCAGTCTCCACTCCAGAACCTGAATGGACTTTTTGCTCAATACAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CAA 72 bp | CTCTGTGCTGATAGTAGACCTGGTCTACTCCCCATTTaGTGTTGCTTCCAAGCTCTTGAGGGAGGGCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LCADSRPGLLPI*CCFQALEGGLF Trigger: AAAGAGCCCTCCCTCAAGAGCTTGGAAGCAACACAAAATGGGGAGTAGACCAGGTCTACTATCAGCACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS GCA 72 bp | CTCCATTTTTCTAGAACTCGTTGCTACCCAAAGGTTTaGTGTGTGGGCCCAAGGCTTTGGTTTCATCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LHFSRTRCYPKV*CVGPRLWFHLL Trigger: GAGCAGATGAAACCAAAGCCTTGGGCCCACACAGCAAACCTTTGGGTAGCAACGAGTTCTAGAAAAATGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CAA 72 bp | AGAATCCCTGCAGGGGCTGGTGTGCGTTTCCCATGCTaGCTGATCCTGCATATATACTTTGTAGAAACCACT | + |
|
Preference number: 6 (lower is better) Translates to: RIPAGAGVRFPC*LILHIYFVETT Trigger: AGTGGTTTCTACAAAGTATATATGCAGGATCAGCAAGCATGGGAAACGCACACCAGCCCCTGCAGGGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CAA 90 bp | TCTAGAATGAGAGACAGAGTTAGTATGCTGCTAGATAGGCATGTGTaGATCACAGGTAGAAAGGGCTGCCAATGGAACAGCAAGCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRMRDRVSMLLDRHV*ITGRKGCQWNSKPR Trigger: CCTTGGCTTGCTGTTCCATTGGCAGCCCTTTCTACCTGTGATCAACACATGCCTATCTAGCAGCATACTAACTCTGTCTCTCATTCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CAA 72 bp | AGAGACAGAGTTAGTATGCTGCTAGATAGGCATGTGTaGATCACAGGTAGAAAGGGCTGCCAATGGAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: RDRVSMLLDRHV*ITGRKGCQWNS Trigger: GCTGTTCCATTGGCAGCCCTTTCTACCTGTGATCAACACATGCCTATCTAGCAGCATACTAACTCTGTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 72 bp | CTAATTTGTTTACTCAAGATGGAATGGAAGACCTCTTaGCACATGTCCCATGAAGCTGACTGGCCAGCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: LICLLKMEWKTS*HMSHEADWPAV Trigger: TACTGCTGGCCAGTCAGCTTCATGGGACATGTGCCAAGAGGTCTTCCATTCCATCTTGAGTAAACAAATTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS TCA 72 bp | ATTTGGCTTCATCCCACACATATTCCCACTGCTCCCTaGAATGCTCCCTTACTGTTTTGTTGGGAATCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: IWLHPTHIPTAP*NAPLLFCWESC Trigger: ACAAGATTCCCAACAAAACAGTAAGGGAGCATTTCAGGGAGCAGTGGGAATATGTGTGGGATGAAGCCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432505.1 |
||
| CDS TCA 72 bp | CTTCCTCTCTGGTCACTGAATCTGTGGATGATGCAATaGCAGGACGCCGACATTCTAAAACTTATTAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: LPLWSLNLWMMQ*QDADILKLINS Trigger: AGAGTTAATAAGTTTTAGAATGTCGGCGTCCTGTCATTGCATCATCCACAGATTCAGTGACCAGAGAGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS GCA 72 bp | CTTTATAATTTGGCTTCATCCCACACATATTCCCACTaGTCCCTGAAATGCTCCCTTACTGTTTTGTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LYNLASSHTYSH*SLKCSLTVLLG Trigger: TCCCAACAAAACAGTAAGGGAGCATTTCAGGGAGCAGTGGGAATATGTGTGGGATGAAGCCAAATTATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432505.1 |
||
| CDS CAA 90 bp | GCCCTCAACATTTGCATAAATACATGGAGCTCCATTTATAGTTCCTaGGGCTGCTGGCAGTTCATTCTATATAGACTTTGGAAGCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ALNICINTWSSIYSS*GCWQFILYRLWKPF Trigger: AAAGGGCTTCCAAAGTCTATATAGAATGAACTGCCAGCAGCCCAAGGAACTATAAATGGAGCTCCATGTATTTATGCAAATGTTGAGGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432505.1 |
||
| CDS CCA 72 bp | AATACATGGAGCTCCATTTATAGTTCCTTGGGCTGCTaGCAGTTCATTCTATATAGACTTTGGAAGCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: NTWSSIYSSLGC*QFILYRLWKPF Trigger: AAAGGGCTTCCAAAGTCTATATAGAATGAACTGCCAGCAGCCCAAGGAACTATAAATGGAGCTCCATGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432505.1 |
||
| CDS CAA 90 bp | CCCACCATCTGCTCCTACTACCTTCCAGGTAACATATACCTCACATaGTCATATCACTTTAATCACCTCCTGGTAGACTTTGAATGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PTICSYYLPGNIYLT*SYHFNHLLVDFECF Trigger: AAAACATTCAAAGTCTACCAGGAGGTGATTAAAGTGATATGACAATGTGAGGTATATGTTACCTGGAAGGTAGTAGGAGCAGATGGTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||
| CDS CCA 72 bp | ATATATCTCATGGGTAGTAATCATTTTAGACTTGCTTaGTATTTCAAGGAAAAACAATCTGGACTCCTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: IYLMGSNHFRLA*YFKEKQSGLLR Trigger: CCTAAGGAGTCCAGATTGTTTTTCCTTGAAATACCAAGCAAGTCTAAAATGATTACTACCCATGAGATATAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000432505.1 ENST00000436123.1 |
||