Pregenerated sensors for LINC00690 (Homo sapiens)
Ensembl gene IDs: ENSG00000233570Ensembl transcript IDs: ENST00000429949.2, ENST00000655456.1, ENST00000656250.1, ENST00000659804.1, ENST00000660552.1, ENST00000660612.1, ENST00000660669.1, ENST00000661146.1, ENST00000661221.1, ENST00000663006.1, ENST00000663672.1, ENST00000664830.1, ENST00000669122.1, ENST00000669844.1, ENST00000670078.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GATAGACTTGTTCATTTGGTCAGGGCCAGGCACTGTGCAGCCTCTTaGTCGGTCCTCCCAACAACTCTGTCGCAGGTACTTTTACTATCC | + |
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Preference number: 5 (lower is better) Translates to: DRLVHLVRARHCAAS*SVLPTTLSQVLLLS Trigger: GGATAGTAAAAGTACCTGCGACAGAGTTGTTGGGAGGACCGAGCAAGAGGCTGCACAGTGCCTGGCCCTGACCAAATGAACAAGTCTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656250.1 |
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| CDS CCA 90 bp | AAGGTGGGTTTATGCTGCTGGCACCTGGAGGAGCCACTCCAGCCATaGAACAGAGTTACTATCACGCTTTGGAAGGATGTCTCTGGGATT | + |
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Preference number: 5 (lower is better) Translates to: KVGLCCWHLEEPLQP*NRVTITLWKDVSGI Trigger: AATCCCAGAGACATCCTTCCAAAGCGTGATAGTAACTCTGTTCCATGGCTGGAGTGGCTCCTCCAGGTGCCAGCAGCATAAACCCACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659804.1 |
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| CDS CCA 90 bp | CTGAGCTGCAGACTGATTGAAAGGTGGGTTTATGCTGCTGGCACCTaGAGGAGCCACTCCAGCCATGGAACAGAGTTACTATCACGCTTT | + |
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Preference number: 5 (lower is better) Translates to: LSCRLIERWVYAAGT*RSHSSHGTELLSRF Trigger: AAAGCGTGATAGTAACTCTGTTCCATGGCTGGAGTGGCTCCTCCAGGTGCCAGCAGCATAAACCCACCTTTCAATCAGTCTGCAGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659804.1 |
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| CDS CCA 90 bp | GTATCTTCATTCTCTGGAGAAAAAGTTCAGATAGACTTGTTCATTTaGTCAGGGCCAGGCACTGTGCAGCCTCTTGCTCGGTCCTCCCAA | + |
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Preference number: 5 (lower is better) Translates to: VSSFSGEKVQIDLFI*SGPGTVQPLARSSQ Trigger: TTGGGAGGACCGAGCAAGAGGCTGCACAGTGCCTGGCCCTGACCAAATGAACAAGTCTATCTGAACTTTTTCTCCAGAGAATGAAGATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656250.1 |
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| CDS CCA 90 bp | CCTCCAGCGTATGCAGCTCATGTTAGTGATTCTTATATGGTCTCTTaGAGATGCTCTTTGAGCCCTGGATCCAATCTGGGTCAGCACTGT | + |
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Preference number: 5 (lower is better) Translates to: PPAYAAHVSDSYMVS*RCSLSPGSNLGQHC Trigger: ACAGTGCTGACCCAGATTGGATCCAGGGCTCAAAGAGCATCTCCAAGAGACCATATAAGAATCACTAACATGAGCTGCATACGCTGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669122.1 |
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| CDS GCA 90 bp | TTTGCCTCAAGGAAGGACAAATGCTGCAGACAATGTGAGATCCAGTaGTGCCTACAAGATCAGGTTGAAGCTGGACTTCACCTGAAGCTA | + |
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Preference number: 5 (lower is better) Translates to: FASRKDKCCRQCEIQ*CLQDQVEAGLHLKL Trigger: TAGCTTCAGGTGAAGTCCAGCTTCAACCTGATCTTGTAGGCAGCACTGGATCTCACATTGTCTGCAGCATTTGTCCTTCCTTGAGGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000655456.1 ENST00000659804.1 ENST00000660552.1 ENST00000660612.1 ENST00000661221.1 ENST00000669122.1 |
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| CDS GCA 90 bp | GCGTATGCAGCTCATGTTAGTGATTCTTATATGGTCTCTTGGAGATaGTCTTTGAGCCCTGGATCCAATCTGGGTCAGCACTGTCCATTG | + |
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Preference number: 5 (lower is better) Translates to: AYAAHVSDSYMVSWR*SLSPGSNLGQHCPL Trigger: CAATGGACAGTGCTGACCCAGATTGGATCCAGGGCTCAAAGAGCATCTCCAAGAGACCATATAAGAATCACTAACATGAGCTGCATACGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669122.1 |
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| CDS TCA 90 bp | AGCTATGGAAACTTGAGACTCCGTCTCTTCGTCTGTAAAATGGGATaGCAATGCCTCCTATATCAGAACTGGCTCCTATTCCAGGCCATC | + |
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Preference number: 5 (lower is better) Translates to: SYGNLRLRLFVCKMG*QCLLYQNWLLFQAI Trigger: GATGGCCTGGAATAGGAGCCAGTTCTGATATAGGAGGCATTGTCATCCCATTTTACAGACGAAGAGACGGAGTCTCAAGTTTCCATAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655456.1 ENST00000660552.1 |
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| CDS TCA 90 bp | TTAGTGGCATGTTTCCGTATCTCAAGGGTGGGGCATTATTGTCCTTaGGGAACTAAAGTGCACACCAGCTATGGAAACTTGAGACTCCGT | + |
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Preference number: 5 (lower is better) Translates to: LVACFRISRVGHYCP*GTKVHTSYGNLRLR Trigger: ACGGAGTCTCAAGTTTCCATAGCTGGTGTGCACTTTAGTTCCTCAAGGACAATAATGCCCCACCCTTGAGATACGGAAACATGCCACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656250.1 |
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| CDS TCA 90 bp | ATTATTGTCCTTGAGGAACTAAAGTGCACACCAGCTATGGAAACTTaGGACTCCGTCTCTTCGTCTGTAAAATGGGATGACAATGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: IIVLEELKCTPAMET*DSVSSSVKWDDNAS Trigger: GGAGGCATTGTCATCCCATTTTACAGACGAAGAGACGGAGTCTCAAGTTTCCATAGCTGGTGTGCACTTTAGTTCCTCAAGGACAATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000655456.1 ENST00000656250.1 ENST00000660552.1 ENST00000661146.1 ENST00000663006.1 ENST00000670078.1 |
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| CDS TCA 90 bp | AATGACAGTATCTTCATTCTCTCAAGGGTGGGGCATTATTGTCCTTaGGGAACTAAAGTGCACACCAGCTATGGAAACTTGAGACTCCGT | + |
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Preference number: 5 (lower is better) Translates to: NDSIFILSRVGHYCP*GTKVHTSYGNLRLR Trigger: ACGGAGTCTCAAGTTTCCATAGCTGGTGTGCACTTTAGTTCCTCAAGGACAATAATGCCCCACCCTTGAGAGAATGAAGATACTGTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000660552.1 ENST00000661146.1 ENST00000663672.1 ENST00000670078.1 |
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| CDS TCA 90 bp | GTAATGACAGTATCTTCATTCTCAAGGGTGGGGCATTATTGTCCTTaGGGAACTAAAGTGCACACCAGCTATGGAAACTTGAGACTCCGT | + |
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Preference number: 5 (lower is better) Translates to: VMTVSSFSRVGHYCP*GTKVHTSYGNLRLR Trigger: ACGGAGTCTCAAGTTTCCATAGCTGGTGTGCACTTTAGTTCCTCAAGGACAATAATGCCCCACCCTTGAGAATGAAGATACTGTCATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663006.1 |
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| CDS TCA 90 bp | ATTATTGTCCTTGAGGAACTAAAGTGCACACCAGCTATGGAAACTTaGGACTCCGTCTCTTCGTATAAACAGTCTCTGGAAATTATAGTC | + |
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Preference number: 5 (lower is better) Translates to: IIVLEELKCTPAMET*DSVSSYKQSLEIIV Trigger: GACTATAATTTCCAGAGACTGTTTATACGAAGAGACGGAGTCTCAAGTTTCCATAGCTGGTGTGCACTTTAGTTCCTCAAGGACAATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663672.1 |
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| CDS TCA 90 bp | AGCTATGGAAACTTGAGACTCCGTCTCTTCGTCTGTAAAATGGGATaGCAATGCCTCCTATATCAGAACCAAGATTTCTATATTTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: SYGNLRLRLFVCKMG*QCLLYQNQDFYIFV Trigger: AACAAAAATATAGAAATCTTGGTTCTGATATAGGAGGCATTGTCATCCCATTTTACAGACGAAGAGACGGAGTCTCAAGTTTCCATAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670078.1 |
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| CDS GCA 72 bp | GTTCATTTGGTCAGGGCCAGGCACTGTGCAGCCTCTTaGTCGGTCCTCCCAACAACTCTGTCGCAGGTACTT | + |
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Preference number: 6 (lower is better) Translates to: VHLVRARHCAAS*SVLPTTLSQVL Trigger: AAGTACCTGCGACAGAGTTGTTGGGAGGACCGAGCAAGAGGCTGCACAGTGCCTGGCCCTGACCAAATGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656250.1 |
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| CDS CCA 72 bp | AGACCTGGCTCCTATTCCAGGCCATCCCCATCTGACTaGGCTGTCTTCCCATCGCAGCGTTTTCCAGCACAT | + |
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Preference number: 6 (lower is better) Translates to: RPGSYSRPSPSD*AVFPSQRFPAH Trigger: ATGTGCTGGAAAACGCTGCGATGGGAAGACAGCCCAGTCAGATGGGGATGGCCTGGAATAGGAGCCAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000661221.1 ENST00000669122.1 |
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| CDS CCA 72 bp | GATCCTGGCTCCTATTCCAGGCCATCCCCATCTGACTaGGCTGTCTTCCCATCGCAGCGTTTTCCAGCACAT | + |
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Preference number: 6 (lower is better) Translates to: DPGSYSRPSPSD*AVFPSQRFPAH Trigger: ATGTGCTGGAAAACGCTGCGATGGGAAGACAGCCCAGTCAGATGGGGATGGCCTGGAATAGGAGCCAGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659804.1 |
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| CDS CAA 72 bp | TGTTCATTTGGTCAGGGCCAGGCACTGTGCAGCCTCTaGCTCGGTCCTCCCAACAACTCTGTCGCAGGTACT | + |
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Preference number: 6 (lower is better) Translates to: CSFGQGQALCSL*LGPPNNSVAGT Trigger: AGTACCTGCGACAGAGTTGTTGGGAGGACCGAGCAAGAGGCTGCACAGTGCCTGGCCCTGACCAAATGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656250.1 |
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| CDS GCA 72 bp | ATTCCAAGTCTTCAGGGATGCACGGCTCCTGTAACATaGAGCCTCCGCGTAGCCTGGATGCAGAGCACTGAA | + |
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Preference number: 6 (lower is better) Translates to: IPSLQGCTAPVT*SLRVAWMQSTE Trigger: TTCAGTGCTCTGCATCCAGGCTACGCGGAGGCTGCATGTTACAGGAGCCGTGCATCCCTGAAGACTTGGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659804.1 |
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| CDS CCA 72 bp | AGAACTGGCTCCTATTCCAGGCCATCCCCATCTGACTaGGCTGTCTTCCCATCGCAGCGTTTTCCAGCACAT | + |
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Preference number: 6 (lower is better) Translates to: RTGSYSRPSPSD*AVFPSQRFPAH Trigger: ATGTGCTGGAAAACGCTGCGATGGGAAGACAGCCCAGTCAGATGGGGATGGCCTGGAATAGGAGCCAGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655456.1 ENST00000660552.1 |
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| CDS CCA 72 bp | TTCTCTGGCTCCTATTCCAGGCCATCCCCATCTGACTaGGCTGTCTTCCCATCGCAGCGTTTTCCAGCACAT | + |
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Preference number: 6 (lower is better) Translates to: FSGSYSRPSPSD*AVFPSQRFPAH Trigger: ATGTGCTGGAAAACGCTGCGATGGGAAGACAGCCCAGTCAGATGGGGATGGCCTGGAATAGGAGCCAGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660612.1 |
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| CDS TCA 72 bp | CGCGTAGCCTGGATGCAGAGCACTGAAGAGTGCGGCTaGGGTAAATGTATGCCAAGAGATCCTGGCTCCTAT | + |
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Preference number: 6 (lower is better) Translates to: RVAWMQSTEECG*GKCMPRDPGSY Trigger: ATAGGAGCCAGGATCTCTTGGCATACATTTACCTCAGCCGCACTCTTCAGTGCTCTGCATCCAGGCTACGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000659804.1 |
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| CDS GCA 72 bp | GTCCTAAATAGCTGCTCTAGCTCCAGCCACTGCTTCTaGTTTCATCCATCCGGAAGGCGGAAGGGGCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: VLNSCSSSSHCF*FHPSGRRKGQR Trigger: TCTTTGCCCCTTCCGCCTTCCGGATGGATGAAAGCAGAAGCAGTGGCTGGAGCTAGAGCAGCTATTTAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000429949.2 ENST00000660669.1 ENST00000664830.1 ENST00000669844.1 |
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| CDS CAA 90 bp | AGTATCTTCATTCTCTGGAGAAAAAGTTCAGATAGACTTGTTCATTaGGTCAGGGCCAGGCACTGTGCAGCCTCTTGCTCGGTCCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SIFILWRKSSDRLVH*VRARHCAASCSVLP Trigger: TGGGAGGACCGAGCAAGAGGCTGCACAGTGCCTGGCCCTGACCAAATGAACAAGTCTATCTGAACTTTTTCTCCAGAGAATGAAGATACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656250.1 |
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| CDS GCA 72 bp | AAGGACAAATGCTGCAGACAATGTGAGATCCAGTGCTaGCTACAAGATCAGGTTGAAGCTGGACTTCACCTG | + |
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Preference number: 6 (lower is better) Translates to: KDKCCRQCEIQC*LQDQVEAGLHL Trigger: CAGGTGAAGTCCAGCTTCAACCTGATCTTGTAGGCAGCACTGGATCTCACATTGTCTGCAGCATTTGTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000655456.1 ENST00000659804.1 ENST00000660552.1 ENST00000660612.1 ENST00000661221.1 ENST00000669122.1 |
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| CDS GCA 72 bp | AGGAAGGACAAATGCTGCAGACAATGTGAGATCCAGTaGTGCCTACAAGATCAGGTTGAAGCTGGACTTCAC | + |
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Preference number: 6 (lower is better) Translates to: RKDKCCRQCEIQ*CLQDQVEAGLH Trigger: GTGAAGTCCAGCTTCAACCTGATCTTGTAGGCAGCACTGGATCTCACATTGTCTGCAGCATTTGTCCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000655456.1 ENST00000659804.1 ENST00000660552.1 ENST00000660612.1 ENST00000661221.1 ENST00000669122.1 |
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| CDS CAA 90 bp | GTAATGACAGTATCTTCATTCTCTGGAGAAAAAGTTCAGATAGACTaGTTCATTTGGTCAGGGCCAGGCACTGTGCAGCCTCTTGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: VMTVSSFSGEKVQID*FIWSGPGTVQPLAR Trigger: CCGAGCAAGAGGCTGCACAGTGCCTGGCCCTGACCAAATGAACAAGTCTATCTGAACTTTTTCTCCAGAGAATGAAGATACTGTCATTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656250.1 |
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| CDS CAA 90 bp | GCAGCTCATGTTAGTGATTCTTATATGGTCTCTTGGAGATGCTCTTaGAGCCCTGGATCCAATCTGGGTCAGCACTGTCCATTGACTTTC | + |
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Preference number: 6 (lower is better) Translates to: AAHVSDSYMVSWRCS*SPGSNLGQHCPLTF Trigger: GAAAGTCAATGGACAGTGCTGACCCAGATTGGATCCAGGGCTCAAAGAGCATCTCCAAGAGACCATATAAGAATCACTAACATGAGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669122.1 |
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| CDS GCA 72 bp | GCTCATGTTAGTGATTCTTATATGGTCTCTTGGAGATaGTCTTTGAGCCCTGGATCCAATCTGGGTCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: AHVSDSYMVSWR*SLSPGSNLGQH Trigger: GTGCTGACCCAGATTGGATCCAGGGCTCAAAGAGCATCTCCAAGAGACCATATAAGAATCACTAACATGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669122.1 |
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| CDS CAA 72 bp | GTTAGTGATTCTTATATGGTCTCTTGGAGATGCTCTTaGAGCCCTGGATCCAATCTGGGTCAGCACTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: VSDSYMVSWRCS*SPGSNLGQHCP Trigger: TGGACAGTGCTGACCCAGATTGGATCCAGGGCTCAAAGAGCATCTCCAAGAGACCATATAAGAATCACTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669122.1 |
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| CDS TCA 72 bp | TGTTTCCGTATCTCAAGGGTGGGGCATTATTGTCCTTaGGGAACTAAAGTGCACACCAGCTATGGAAACTTG | + |
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Preference number: 6 (lower is better) Translates to: CFRISRVGHYCP*GTKVHTSYGNL Trigger: CAAGTTTCCATAGCTGGTGTGCACTTTAGTTCCTCAAGGACAATAATGCCCCACCCTTGAGATACGGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656250.1 |
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| CDS TCA 72 bp | TTAGTGATTCTTATATGGTCTCTTGGAGATGCTCTTTaGGCCCTGGATCCAATCTGGGTCAGCACTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LVILIWSLGDAL*ALDPIWVSTVH Trigger: ATGGACAGTGCTGACCCAGATTGGATCCAGGGCTCAAAGAGCATCTCCAAGAGACCATATAAGAATCACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669122.1 |
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| CDS GCA 72 bp | TCACCACATTTCTTCCATCTCATAGTCCTAAATAGCTaGTCTAGCTCCAGCCACTGCTTCTGCTTTCATCCA | + |
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Preference number: 6 (lower is better) Translates to: SPHFFHLIVLNS*SSSSHCFCFHP Trigger: TGGATGAAAGCAGAAGCAGTGGCTGGAGCTAGAGCAGCTATTTAGGACTATGAGATGGAAGAAATGTGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000429949.2 ENST00000656250.1 ENST00000660669.1 ENST00000661146.1 ENST00000663006.1 ENST00000663672.1 ENST00000664830.1 ENST00000669844.1 |
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| CDS CCA 72 bp | TTCTTATATGGTCTCTTGGAGATGCTCTTTGAGCCCTaGATCCAATCTGGGTCAGCACTGTCCATTGACTTT | + |
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Preference number: 6 (lower is better) Translates to: FLYGLLEMLFEP*IQSGSALSIDF Trigger: AAAGTCAATGGACAGTGCTGACCCAGATTGGATCCAGGGCTCAAAGAGCATCTCCAAGAGACCATATAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669122.1 |
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| CDS CAA 72 bp | GTATCTTCATTCTCTGGAGAAAAAGTTCAGATAGACTaGTTCATTTGGTCAGGGCCAGGCACTGTGCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: VSSFSGEKVQID*FIWSGPGTVQP Trigger: AGGCTGCACAGTGCCTGGCCCTGACCAAATGAACAAGTCTATCTGAACTTTTTCTCCAGAGAATGAAGATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656250.1 |
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| CDS TCA 72 bp | AACTTGAGACTCCGTCTCTTCGTCTGTAAAATGGGATaGCAATGCCTCCTATATCAGAACTGGCTCCTATTC | + |
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Preference number: 6 (lower is better) Translates to: NLRLRLFVCKMG*QCLLYQNWLLF Trigger: GAATAGGAGCCAGTTCTGATATAGGAGGCATTGTCATCCCATTTTACAGACGAAGAGACGGAGTCTCAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655456.1 ENST00000660552.1 |
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| CDS TCA 72 bp | ATCTTCATTCTCTCAAGGGTGGGGCATTATTGTCCTTaGGGAACTAAAGTGCACACCAGCTATGGAAACTTG | + |
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Preference number: 6 (lower is better) Translates to: IFILSRVGHYCP*GTKVHTSYGNL Trigger: CAAGTTTCCATAGCTGGTGTGCACTTTAGTTCCTCAAGGACAATAATGCCCCACCCTTGAGAGAATGAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000660552.1 ENST00000661146.1 ENST00000663672.1 ENST00000670078.1 |
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| CDS TCA 72 bp | GTATCTTCATTCTCAAGGGTGGGGCATTATTGTCCTTaGGGAACTAAAGTGCACACCAGCTATGGAAACTTG | + |
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Preference number: 6 (lower is better) Translates to: VSSFSRVGHYCP*GTKVHTSYGNL Trigger: CAAGTTTCCATAGCTGGTGTGCACTTTAGTTCCTCAAGGACAATAATGCCCCACCCTTGAGAATGAAGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663006.1 |
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| CDS TCA 72 bp | CTTGAGGAACTAAAGTGCACACCAGCTATGGAAACTTaGGACTCCGTCTCTTCGTATAAACAGTCTCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LEELKCTPAMET*DSVSSYKQSLE Trigger: TTCCAGAGACTGTTTATACGAAGAGACGGAGTCTCAAGTTTCCATAGCTGGTGTGCACTTTAGTTCCTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663672.1 |
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| CDS CCA 72 bp | TATGCAGCTCATGTTAGTGATTCTTATATGGTCTCTTaGAGATGCTCTTTGAGCCCTGGATCCAATCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: YAAHVSDSYMVS*RCSLSPGSNLG Trigger: ACCCAGATTGGATCCAGGGCTCAAAGAGCATCTCCAAGAGACCATATAAGAATCACTAACATGAGCTGCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669122.1 |
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| CDS CAA 72 bp | TCACATAAACAGTCTCTGGAAATTATAGTCCAGAGTTaGTATGGCGGCTCCGTGGTCATCAAGTACCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: SHKQSLEIIVQS*YGGSVVIKYPR Trigger: TCTTGGGTACTTGATGACCACGGAGCCGCCATACAAACTCTGGACTATAATTTCCAGAGACTGTTTATGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656250.1 ENST00000661146.1 ENST00000663006.1 |
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| CDS CAA 72 bp | AGACATAAACAGTCTCTGGAAATTATAGTCCAGAGTTaGTATGGCGGCTCCGTGGTCATCAAGTACCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: RHKQSLEIIVQS*YGGSVVIKYPR Trigger: TCTTGGGTACTTGATGACCACGGAGCCGCCATACAAACTCTGGACTATAATTTCCAGAGACTGTTTATGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664830.1 |
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| CDS CAA 72 bp | TCGTATAAACAGTCTCTGGAAATTATAGTCCAGAGTTaGTATGGCGGCTCCGTGGTCATCAAGTACCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: SYKQSLEIIVQS*YGGSVVIKYPR Trigger: TCTTGGGTACTTGATGACCACGGAGCCGCCATACAAACTCTGGACTATAATTTCCAGAGACTGTTTATACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663672.1 |
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| CDS CAA 72 bp | CTTATATGGTCTCTGCTAGTCTCTATAAAACAGGCCTaGAATGTGCCCCCATATCTTAATGTAGCTGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LIWSLLVSIKQA*NVPPYLNVAEA Trigger: AGCCTCAGCTACATTAAGATATGGGGGCACATTCAAGGCCTGTTTTATAGAGACTAGCAGAGACCATATAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000655456.1 ENST00000659804.1 ENST00000660552.1 ENST00000660612.1 ENST00000661221.1 |
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| CDS CAA 72 bp | TTCTATAAACAGTCTCTGGAAATTATAGTCCAGAGTTaGTATGGCGGCTCCGTGGTCATCAAGTACCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: FYKQSLEIIVQS*YGGSVVIKYPR Trigger: TCTTGGGTACTTGATGACCACGGAGCCGCCATACAAACTCTGGACTATAATTTCCAGAGACTGTTTATAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660669.1 |
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| CDS CAA 72 bp | TTGAGCCCTGGATCCAATCTGGGTCAGCACTGTCCATaGACTTTCTCATTTCATGAACCAATGTATTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LSPGSNLGQHCP*TFSFHEPMYFL Trigger: AAGGAAATACATTGGTTCATGAAATGAGAAAGTCAATGGACAGTGCTGACCCAGATTGGATCCAGGGCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669122.1 |
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| CDS CAA 90 bp | TTAGTGATTCTTATATGGTCTCTGCTAGTCTCTATAAAACAGGCCTaGAATGTGCCCCCATATCTTAATGTAGCTGAGGCTGTTGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: LVILIWSLLVSIKQA*NVPPYLNVAEAVAV Trigger: GACTGCAACAGCCTCAGCTACATTAAGATATGGGGGCACATTCAAGGCCTGTTTTATAGAGACTAGCAGAGACCATATAAGAATCACTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000655456.1 ENST00000659804.1 ENST00000660552.1 ENST00000660612.1 ENST00000661221.1 |
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| CDS CAA 90 bp | ATTTCTCTCTCACATAAACAGTCTCTGGAAATTATAGTCCAGAGTTaGTATGGCGGCTCCGTGGTCATCAAGTACCCAAGATTTCTATAT | + |
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Preference number: 6 (lower is better) Translates to: ISLSHKQSLEIIVQS*YGGSVVIKYPRFLY Trigger: ATATAGAAATCTTGGGTACTTGATGACCACGGAGCCGCCATACAAACTCTGGACTATAATTTCCAGAGACTGTTTATGTGAGAGAGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656250.1 ENST00000661146.1 ENST00000663006.1 |
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| CDS CAA 90 bp | AGTTCAGATAGACATAAACAGTCTCTGGAAATTATAGTCCAGAGTTaGTATGGCGGCTCCGTGGTCATCAAGTACCCAAGATTTCTATAT | + |
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Preference number: 6 (lower is better) Translates to: SSDRHKQSLEIIVQS*YGGSVVIKYPRFLY Trigger: ATATAGAAATCTTGGGTACTTGATGACCACGGAGCCGCCATACAAACTCTGGACTATAATTTCCAGAGACTGTTTATGTCTATCTGAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664830.1 |
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| CDS TCA 72 bp | AACTTGAGACTCCGTCTCTTCGTCTGTAAAATGGGATaGCAATGCCTCCTATATCAGAACCAAGATTTCTAT | + |
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Preference number: 6 (lower is better) Translates to: NLRLRLFVCKMG*QCLLYQNQDFY Trigger: ATAGAAATCTTGGTTCTGATATAGGAGGCATTGTCATCCCATTTTACAGACGAAGAGACGGAGTCTCAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670078.1 |
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| CDS CCA 72 bp | CCTATTTCAACCTCTGCTTCTAGGGAACACAACCTGTaGCAAATTGTAATTTCTAAAGATGGCAGCCATAAT | + |
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Preference number: 6 (lower is better) Translates to: PISTSASREHNL*QIVISKDGSHN Trigger: ATTATGGCTGCCATCTTTAGAAATTACAATTTGCCACAGGTTGTGTTCCCTAGAAGCAGAGGTTGAAATAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000655456.1 ENST00000659804.1 ENST00000660552.1 ENST00000660612.1 ENST00000661221.1 ENST00000669122.1 |
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