Pregenerated sensors for LINC00682 (Homo sapiens)
Ensembl gene IDs: ENSG00000245870Ensembl transcript IDs: ENST00000498940.1, ENST00000499082.2, ENST00000504870.1, ENST00000637677.1, ENST00000670465.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GATCACGCGGAGAGGATTCCTTCTTCCCCTCTTTACTCCGCGCCCTaGCGCGGAAACCCTTCCCGTGGCCTCGAACTGGTCCCCGACGAC | + |
|
Preference number: 5 (lower is better) Translates to: DHAERIPSSPLYSAP*RGNPSRGLELVPDD Trigger: GTCGTCGGGGACCAGTTCGAGGCCACGGGAAGGGTTTCCGCGGCAGGGCGCGGAGTAAAGAGGGGAAGAAGGAATCCTCTCCGCGTGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CCA 90 bp | GCCTCTCCGACATCCACCCGCTTCCAGGGACCTGTACGCTTTCCTTaGGTGCGAACTCGAGTCCAGGACCGGCAGGGTTCTCGCCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: ASPTSTRFQGPVRFP*VRTRVQDRQGSRLN Trigger: ATTAAGGCGAGAACCCTGCCGGTCCTGGACTCGAGTTCGCACCCAAGGAAAGCGTACAGGTCCCTGGAAGCGGGTGGATGTCGGAGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CCA 90 bp | CGCGCAGATGCGGGAAGACTCCAGGCTGTGCTTGAGCTGTTTTACTaGGCCTGGCCGAGGAATAAGCGAGCCTCAGCATGCTTGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RADAGRLQAVLELFY*AWPRNKRASACLGQ Trigger: CTGGCCCAAGCATGCTGAGGCTCGCTTATTCCTCGGCCAGGCCCAGTAAAACAGCTCAAGCACAGCCTGGAGTCTTCCCGCATCTGCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS GCA 90 bp | CTCCGACATCCACCCGCTTCCAGGGACCTGTACGCTTTCCTTGGGTaGGAACTCGAGTCCAGGACCGGCAGGGTTCTCGCCTTAATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LRHPPASRDLYAFLG*ELESRTGRVLALIC Trigger: ACAGATTAAGGCGAGAACCCTGCCGGTCCTGGACTCGAGTTCGCACCCAAGGAAAGCGTACAGGTCCCTGGAAGCGGGTGGATGTCGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS GCA 90 bp | GAGCTGTTTTACTGGGCCTGGCCGAGGAATAAGCGAGCCTCAGCATaGTTGGGCCAGAGCGAGAAGCATCTTCATGACCCTGGGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ELFYWAWPRNKRASA*LGQSEKHLHDPGVP Trigger: GGGCACCCCAGGGTCATGAAGATGCTTCTCGCTCTGGCCCAAGCATGCTGAGGCTCGCTTATTCCTCGGCCAGGCCCAGTAAAACAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CCA 90 bp | CGGAAAGGATTCCCGTGCTCAGGGAACCTGGGGCACAGGAGAGGGTaGATAGGCGCGAATAAGCGGGCTCCAAAAAGTGGTGTGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RKGFPCSGNLGHRRG*IGANKRAPKSGVAW Trigger: CCAAGCCACACCACTTTTTGGAGCCCGCTTATTCGCGCCTATCCACCCTCTCCTGTGCCCCAGGTTCCCTGAGCACGGGAATCCTTTCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CCA 90 bp | GATGCGGGAAGACTCCAGGCTGTGCTTGAGCTGTTTTACTGGGCCTaGCCGAGGAATAAGCGAGCCTCAGCATGCTTGGGCCAGAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: DAGRLQAVLELFYWA*PRNKRASACLGQSE Trigger: CTCGCTCTGGCCCAAGCATGCTGAGGCTCGCTTATTCCTCGGCCAGGCCCAGTAAAACAGCTCAAGCACAGCCTGGAGTCTTCCCGCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS TCA 90 bp | GCTGAGCTGGAACCTGGGTGTGAGAGTATCACAAGCCCGCCCTACTaGTCACGCGGAGAGGATTCCTTCTTCCCCTCTTTACTCCGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AELEPGCESITSPPY*SRGEDSFFPSLLRA Trigger: GGCGCGGAGTAAAGAGGGGAAGAAGGAATCCTCTCCGCGTGATCAGTAGGGCGGGCTTGTGATACTCTCACACCCAGGTTCCAGCTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS GCA 90 bp | AAGCCAGACTCTACTCCCGCGCAGATGCGGGAAGACTCCAGGCTGTaGTTGAGCTGTTTTACTGGGCCTGGCCGAGGAATAAGCGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KPDSTPAQMREDSRL*LSCFTGPGRGISEP Trigger: AGGCTCGCTTATTCCTCGGCCAGGCCCAGTAAAACAGCTCAAGCACAGCCTGGAGTCTTCCCGCATCTGCGCGGGAGTAGAGTCTGGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS GCA 90 bp | CTCCCAAAGTGGTTGAAGGTGCGCGCATTCCAGACGGCTCTGACCTaGCTCCGCCGGTCTCGATTATTTTATACATTTCTCGGCGATACA | + |
|
Preference number: 5 (lower is better) Translates to: LPKWLKVRAFQTALT*LRRSRLFYTFLGDT Trigger: TGTATCGCCGAGAAATGTATAAAATAATCGAGACCGGCGGAGGCAGGTCAGAGCCGTCTGGAATGCGCGCACCTTCAACCACTTTGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504870.1 |
||
| CDS GCA 90 bp | CTCCAAATACCGTTGAAGGTGCGCGCATTCCAGACGGCTCTGACCTaGCTCCGCCGGTCTCGATTATTTTATACATTTCTCGGCGATACA | + |
|
Preference number: 5 (lower is better) Translates to: LQIPLKVRAFQTALT*LRRSRLFYTFLGDT Trigger: TGTATCGCCGAGAAATGTATAAAATAATCGAGACCGGCGGAGGCAGGTCAGAGCCGTCTGGAATGCGCGCACCTTCAACGGTATTTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499082.2 |
||
| CDS GCA 90 bp | TGGCATTGTTCGTTGAAGGTGCGCGCATTCCAGACGGCTCTGACCTaGCTCCGCCGGTCTCGATTATTTTATACATTTCTCGGCGATACA | + |
|
Preference number: 5 (lower is better) Translates to: WHCSLKVRAFQTALT*LRRSRLFYTFLGDT Trigger: TGTATCGCCGAGAAATGTATAAAATAATCGAGACCGGCGGAGGCAGGTCAGAGCCGTCTGGAATGCGCGCACCTTCAACGAACAATGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637677.1 |
||
| CDS CCA 90 bp | GGGTGGATAGGCGCGAATAAGCGGGCTCCAAAAAGTGGTGTGGCTTaGCAATCCTATTCGTTCTTGGCGGGCAGAAAATTCAGTGCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GWIGANKRAPKSGVA*QSYSFLAGRKFSAN Trigger: ATTCGCACTGAATTTTCTGCCCGCCAAGAACGAATAGGATTGCCAAGCCACACCACTTTTTGGAGCCCGCTTATTCGCGCCTATCCACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CCA 90 bp | GGAAAACATGTAGAAATCGTTTCGACTCACTGCATTCAGAACCCATaGAAGGGAATCACAAAACTGCACTTTGGCATTGTTGGCCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GKHVEIVSTHCIQNP*KGITKLHFGIVGLK Trigger: TTTCAGGCCAACAATGCCAAAGTGCAGTTTTGTGATTCCCTTCCATGGGTTCTGAATGCAGTGAGTCGAAACGATTTCTACATGTTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637677.1 |
||
| CDS TCA 90 bp | ACCCATGGAAGGGAATCACAAAACTGCACTTTGGCATTGTTGGCCTaGAAGGATATCTATTTATCATCTTATAAGACAGCTCGAATGATC | + |
|
Preference number: 5 (lower is better) Translates to: THGRESQNCTLALLA*KDIYLSSYKTARMI Trigger: GATCATTCGAGCTGTCTTATAAGATGATAAATAGATATCCTTTCAGGCCAACAATGCCAAAGTGCAGTTTTGTGATTCCCTTCCATGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637677.1 |
||
| CDS CCA 90 bp | TCAGAACCCATGGAAGGGAATCACAAAACTGCACTTTGGCATTGTTaGCCTGAAAGGATATCTATTTATCATCTTATAAGACAGCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: SEPMEGNHKTALWHC*PERISIYHLIRQLE Trigger: TTCGAGCTGTCTTATAAGATGATAAATAGATATCCTTTCAGGCCAACAATGCCAAAGTGCAGTTTTGTGATTCCCTTCCATGGGTTCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637677.1 |
||
| CDS CCA 90 bp | TCACTGCATTCAGAACCCATGGAAGGGAATCACAAAACTGCACTTTaGCATTGTTGGCCTGAAAGGATATCTATTTATCATCTTATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLHSEPMEGNHKTAL*HCWPERISIYHLIR Trigger: TCTTATAAGATGATAAATAGATATCCTTTCAGGCCAACAATGCCAAAGTGCAGTTTTGTGATTCCCTTCCATGGGTTCTGAATGCAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637677.1 |
||
| CDS CCA 72 bp | TCTTTACTCCGCGCCCTGCCGCGGAAACCCTTCCCGTaGCCTCGAACTGGTCCCCGACGACTGCGGGGTACG | + |
|
Preference number: 6 (lower is better) Translates to: SLLRALPRKPFP*PRTGPRRLRGT Trigger: CGTACCCCGCAGTCGTCGGGGACCAGTTCGAGGCCACGGGAAGGGTTTCCGCGGCAGGGCGCGGAGTAAAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS GCA 72 bp | CCACCCGCTTCCAGGGACCTGTACGCTTTCCTTGGGTaGGAACTCGAGTCCAGGACCGGCAGGGTTCTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPASRDLYAFLG*ELESRTGRVLA Trigger: GGCGAGAACCCTGCCGGTCCTGGACTCGAGTTCGCACCCAAGGAAAGCGTACAGGTCCCTGGAAGCGGGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS GCA 72 bp | GAGAGGATTCCTTCTTCCCCTCTTTACTCCGCGCCCTaGCGCGGAAACCCTTCCCGTGGCCTCGAACTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ERIPSSPLYSAP*RGNPSRGLELV Trigger: GACCAGTTCGAGGCCACGGGAAGGGTTTCCGCGGCAGGGCGCGGAGTAAAGAGGGGAAGAAGGAATCCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CCA 72 bp | GGGCCTGGCCGAGGAATAAGCGAGCCTCAGCATGCTTaGGCCAGAGCGAGAAGCATCTTCATGACCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GPGRGISEPQHA*ARARSIFMTLG Trigger: CCCCAGGGTCATGAAGATGCTTCTCGCTCTGGCCCAAGCATGCTGAGGCTCGCTTATTCCTCGGCCAGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CAA 72 bp | GACATCCACCCGCTTCCAGGGACCTGTACGCTTTCCTaGGGTGCGAACTCGAGTCCAGGACCGGCAGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: DIHPLPGTCTLS*GANSSPGPAGF Trigger: GAACCCTGCCGGTCCTGGACTCGAGTTCGCACCCAAGGAAAGCGTACAGGTCCCTGGAAGCGGGTGGATGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CAA 90 bp | GTGTCGAACTGCACTTCCCTTCCCGCTCTGAGCCACCGAACAAACTaGGCCATGCCCGGAAAGGATTCCCGTGCTCAGGGAACCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VSNCTSLPALSHRTN*AMPGKDSRAQGTWG Trigger: GCCCCAGGTTCCCTGAGCACGGGAATCCTTTCCGGGCATGGCCAAGTTTGTTCGGTGGCTCAGAGCGGGAAGGGAAGTGCAGTTCGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CCA 72 bp | GCCCATAGCCGGCCTTTGATCTCCAAGCGGAGCAGCTaGACAGGTGTCGAACTGCACTTCCCTTCCCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: AHSRPLISKRSS*TGVELHFPSRS Trigger: AGAGCGGGAAGGGAAGTGCAGTTCGACACCTGTCCAGCTGCTCCGCTTGGAGATCAAAGGCCGGCTATGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CCA 72 bp | ACATCCACCCGCTTCCAGGGACCTGTACGCTTTCCTTaGGTGCGAACTCGAGTCCAGGACCGGCAGGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TSTRFQGPVRFP*VRTRVQDRQGS Trigger: AGAACCCTGCCGGTCCTGGACTCGAGTTCGCACCCAAGGAAAGCGTACAGGTCCCTGGAAGCGGGTGGATGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CAA 72 bp | TGGGCCTGGCCGAGGAATAAGCGAGCCTCAGCATGCTaGGGCCAGAGCGAGAAGCATCTTCATGACCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: WAWPRNKRASAC*GQSEKHLHDPG Trigger: CCCAGGGTCATGAAGATGCTTCTCGCTCTGGCCCAAGCATGCTGAGGCTCGCTTATTCCTCGGCCAGGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CAA 90 bp | CCAGACTCTACTCCCGCGCAGATGCGGGAAGACTCCAGGCTGTGCTaGAGCTGTTTTACTGGGCCTGGCCGAGGAATAAGCGAGCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PDSTPAQMREDSRLC*SCFTGPGRGISEPQ Trigger: CTGAGGCTCGCTTATTCCTCGGCCAGGCCCAGTAAAACAGCTCAAGCACAGCCTGGAGTCTTCCCGCATCTGCGCGGGAGTAGAGTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS TCA 72 bp | CTGGACAGGTGTCGAACTGCACTTCCCTTCCCGCTCTaGGCCACCGAACAAACTTGGCCATGCCCGGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LDRCRTALPFPL*ATEQTWPCPER Trigger: CCTTTCCGGGCATGGCCAAGTTTGTTCGGTGGCTCAGAGCGGGAAGGGAAGTGCAGTTCGACACCTGTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CCA 72 bp | GCGGGAAGACTCCAGGCTGTGCTTGAGCTGTTTTACTaGGCCTGGCCGAGGAATAAGCGAGCCTCAGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: AGRLQAVLELFY*AWPRNKRASAC Trigger: GCATGCTGAGGCTCGCTTATTCCTCGGCCAGGCCCAGTAAAACAGCTCAAGCACAGCCTGGAGTCTTCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CAA 72 bp | TGCACTTCCCTTCCCGCTCTGAGCCACCGAACAAACTaGGCCATGCCCGGAAAGGATTCCCGTGCTCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CTSLPALSHRTN*AMPGKDSRAQG Trigger: TCCCTGAGCACGGGAATCCTTTCCGGGCATGGCCAAGTTTGTTCGGTGGCTCAGAGCGGGAAGGGAAGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CAA 72 bp | ACTCCCGCGCAGATGCGGGAAGACTCCAGGCTGTGCTaGAGCTGTTTTACTGGGCCTGGCCGAGGAATAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TPAQMREDSRLC*SCFTGPGRGIS Trigger: GCTTATTCCTCGGCCAGGCCCAGTAAAACAGCTCAAGCACAGCCTGGAGTCTTCCCGCATCTGCGCGGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS TCA 72 bp | TCCCGTAAATCTGTCGCTCAGCCCATAGCCGGCCTTTaGTCTCCAAGCGGAGCAGCTGGACAGGTGTCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SRKSVAQPIAGL*SPSGAAGQVSN Trigger: GTTCGACACCTGTCCAGCTGCTCCGCTTGGAGATCAAAGGCCGGCTATGGGCTGAGCGACAGATTTACGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS GCA 72 bp | TACTGGGCCTGGCCGAGGAATAAGCGAGCCTCAGCATaGTTGGGCCAGAGCGAGAAGCATCTTCATGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: YWAWPRNKRASA*LGQSEKHLHDP Trigger: AGGGTCATGAAGATGCTTCTCGCTCTGGCCCAAGCATGCTGAGGCTCGCTTATTCCTCGGCCAGGCCCAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS GCA 72 bp | TCTACTCCCGCGCAGATGCGGGAAGACTCCAGGCTGTaGTTGAGCTGTTTTACTGGGCCTGGCCGAGGAATA | + |
|
Preference number: 6 (lower is better) Translates to: STPAQMREDSRL*LSCFTGPGRGI Trigger: TATTCCTCGGCCAGGCCCAGTAAAACAGCTCAAGCACAGCCTGGAGTCTTCCCGCATCTGCGCGGGAGTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CCA 72 bp | AGACTCCAGGCTGTGCTTGAGCTGTTTTACTGGGCCTaGCCGAGGAATAAGCGAGCCTCAGCATGCTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RLQAVLELFYWA*PRNKRASACLG Trigger: GCCCAAGCATGCTGAGGCTCGCTTATTCCTCGGCCAGGCCCAGTAAAACAGCTCAAGCACAGCCTGGAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS TCA 72 bp | CTCAGCATGCTTGGGCCAGAGCGAGAAGCATCTTCATaGCCCTGGGGTGCCCCTTCCTTTACTAATAACCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSMLGPEREASS*PWGAPSFTNNL Trigger: CAGGTTATTAGTAAAGGAAGGGGCACCCCAGGGTCATGAAGATGCTTCTCGCTCTGGCCCAAGCATGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS TCA 72 bp | GAACCTGGGTGTGAGAGTATCACAAGCCCGCCCTACTaGTCACGCGGAGAGGATTCCTTCTTCCCCTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: EPGCESITSPPY*SRGEDSFFPSL Trigger: TAAAGAGGGGAAGAAGGAATCCTCTCCGCGTGATCAGTAGGGCGGGCTTGTGATACTCTCACACCCAGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS GCA 72 bp | CCGTTGAAGGTGCGCGCATTCCAGACGGCTCTGACCTaGCTCCGCCGGTCTCGATTATTTTATACATTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PLKVRAFQTALT*LRRSRLFYTFL Trigger: GAGAAATGTATAAAATAATCGAGACCGGCGGAGGCAGGTCAGAGCCGTCTGGAATGCGCGCACCTTCAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499082.2 |
||
| CDS GCA 72 bp | TGGTTGAAGGTGCGCGCATTCCAGACGGCTCTGACCTaGCTCCGCCGGTCTCGATTATTTTATACATTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: WLKVRAFQTALT*LRRSRLFYTFL Trigger: GAGAAATGTATAAAATAATCGAGACCGGCGGAGGCAGGTCAGAGCCGTCTGGAATGCGCGCACCTTCAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504870.1 |
||
| CDS GCA 72 bp | TCGTTGAAGGTGCGCGCATTCCAGACGGCTCTGACCTaGCTCCGCCGGTCTCGATTATTTTATACATTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLKVRAFQTALT*LRRSRLFYTFL Trigger: GAGAAATGTATAAAATAATCGAGACCGGCGGAGGCAGGTCAGAGCCGTCTGGAATGCGCGCACCTTCAACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637677.1 |
||
| CDS CCA 72 bp | GGCGCGAATAAGCGGGCTCCAAAAAGTGGTGTGGCTTaGCAATCCTATTCGTTCTTGGCGGGCAGAAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: GANKRAPKSGVA*QSYSFLAGRKF Trigger: GAATTTTCTGCCCGCCAAGAACGAATAGGATTGCCAAGCCACACCACTTTTTGGAGCCCGCTTATTCGCGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CAA 90 bp | AAGCGGGCTCCAAAAAGTGGTGTGGCTTGGCAATCCTATTCGTTCTaGGCGGGCAGAAAATTCAGTGCGAATAATCTCCAAATACCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: KRAPKSGVAWQSYSF*AGRKFSANNLQIPL Trigger: CAACGGTATTTGGAGATTATTCGCACTGAATTTTCTGCCCGCCAAGAACGAATAGGATTGCCAAGCCACACCACTTTTTGGAGCCCGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000499082.2 |
||
| CDS CAA 72 bp | CCAAAAAGTGGTGTGGCTTGGCAATCCTATTCGTTCTaGGCGGGCAGAAAATTCAGTGCGAATAATCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PKSGVAWQSYSF*AGRKFSANNLQ Trigger: TTGGAGATTATTCGCACTGAATTTTCTGCCCGCCAAGAACGAATAGGATTGCCAAGCCACACCACTTTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CCA 72 bp | CAAAAAGTGGTGTGGCTTGGCAATCCTATTCGTTCTTaGCGGGCAGAAAATTCAGTGCGAATAATCTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: QKVVWLGNPIRS*RAENSVRIISK Trigger: TTTGGAGATTATTCGCACTGAATTTTCTGCCCGCCAAGAACGAATAGGATTGCCAAGCCACACCACTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS GCA 72 bp | ACCATGGGAAAACATGTAGAAATCGTTTCGACTCACTaGATTCAGAACCCATGGAAGGGAATCACAAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: TMGKHVEIVSTH*IQNPWKGITKL Trigger: CAGTTTTGTGATTCCCTTCCATGGGTTCTGAATGCAGTGAGTCGAAACGATTTCTACATGTTTTCCCATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637677.1 |
||
| CDS CCA 72 bp | GTAGAAATCGTTTCGACTCACTGCATTCAGAACCCATaGAAGGGAATCACAAAACTGCACTTTGGCATTGTT | + |
|
Preference number: 6 (lower is better) Translates to: VEIVSTHCIQNP*KGITKLHFGIV Trigger: AACAATGCCAAAGTGCAGTTTTGTGATTCCCTTCCATGGGTTCTGAATGCAGTGAGTCGAAACGATTTCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637677.1 |
||
| CDS CAA 90 bp | TATTTGCAGACTCGGGTTGATAAAGCAATAACTATTTGGTTAAACTaGACATTTGGTCTTCAGGGGGTTATCAGACAAATCTCTGTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: YLQTRVDKAITIWLN*TFGLQGVIRQISVA Trigger: GGCGACAGAGATTTGTCTGATAACCCCCTGAAGACCAAATGTCAAGTTTAACCAAATAGTTATTGCTTTATCAACCCGAGTCTGCAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000499082.2 ENST00000670465.1 |
||
| CDS TCA 72 bp | ATCGGCAAATCTTCATATCCATCCATTACCAGCAAATaGGCCGCACAAAGGACAGATTTGCTTTTGATTAAT | + |
|
Preference number: 6 (lower is better) Translates to: IGKSSYPSITSK*AAQRTDLLLIN Trigger: ATTAATCAAAAGCAAATCTGTCCTTTGTGCGGCTCATTTGCTGGTAATGGATGGATATGAAGATTTGCCGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670465.1 |
||
| CDS GCA 72 bp | TTTCTCGGCGATACACTTATAAACAAGTGGAAATTTTaGATCCTACTGCACCATTTTATACATGATGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: FLGDTLINKWKF*ILLHHFIHDEP Trigger: CGGCTCATCATGTATAAAATGGTGCAGTAGGATGCAAAATTTCCACTTGTTTATAAGTGTATCGCCGAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000637677.1 |
||
| CDS CAA 72 bp | AATATTTTTGGTTGTAAGGACATCAGCTCACACCCGTaGTTATGTCTAAATCCACACTCCCCAACTTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: NIFGCKDISSHP*LCLNPHSPTCF Trigger: AAAACAAGTTGGGGAGTGTGGATTTAGACATAACAACGGGTGTGAGCTGATGTCCTTACAACCAAAAATATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000498940.1 ENST00000499082.2 ENST00000670465.1 |
||
| CDS CCA 72 bp | ATGGAAGGGAATCACAAAACTGCACTTTGGCATTGTTaGCCTGAAAGGATATCTATTTATCATCTTATAAGA | + |
|
Preference number: 6 (lower is better) Translates to: MEGNHKTALWHC*PERISIYHLIR Trigger: TCTTATAAGATGATAAATAGATATCCTTTCAGGCCAACAATGCCAAAGTGCAGTTTTGTGATTCCCTTCCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000637677.1 |
||