Pregenerated sensors for LINC00672 (Homo sapiens)
Ensembl gene IDs: ENSG00000263874Ensembl transcript IDs: ENST00000583195.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGCCAGGGGTCAGCCATGTCTGGAAGGCTCTGAAAGAGGTCTGCTaGGCAGTAGGACTGCTTCTGTGGATGAGAGGCCTCTTGTTGGAC | + |
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Preference number: 1 (lower is better) Translates to: LPGVSHVWKALKEVC*AVGLLLWMRGLLLD Trigger: GTCCAACAAGAGGCCTCTCATCCACAGAAGCAGTCCTACTGCCCAGCAGACCTCTTTCAGAGCCTTCCAGACATGGCTGACCCCTGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR TCA 90 bp | CAGCTCAAACATATGCAGTATCTGCCAGCCCTGTCCATGAATTCCTaGAGTCCCAGCCAAGTGCCTCTCAGCTCAAAAAGCCCCTTGCTT | + |
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Preference number: 1 (lower is better) Translates to: QLKHMQYLPALSMNS*SPSQVPLSSKSPLL Trigger: AAGCAAGGGGCTTTTTGAGCTGAGAGGCACTTGGCTGGGACTTCAGGAATTCATGGACAGGGCTGGCAGATACTGCATATGTTTGAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR CCA 90 bp | CACACACACACACACGCACACACACACACACACACACACTCATTTTaGGGTAAGAGATTTTTCCTAAATAAGTATAGCCATCTTGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: HTHTHAHTHTHTHSF*GKRFFLNKYSHLVS Trigger: AGAAACAAGATGGCTATACTTATTTAGGAAAAATCTCTTACCCCAAAATGAGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACAAGGGAGTCCTGTGTGTGGGCCTCTTGTTGGACTaGAGAGACCAGGAGCCGAGA | + |
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Preference number: 2 (lower is better) Translates to: EDGQLELPLEFHKGVLCVGLLLD*RDQEPR Trigger: TCTCGGCTCCTGGTCTCTCCAGTCCAACAAGAGGCC...CACACACAGGACTCCCTTGTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGGCCTAACAGCCTCCCGGGTAGCTaGGACTACAGGCGCGCACTA | + |
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Preference number: 2 (lower is better) Translates to: GNSVLDVVSKEIMRPWPNSLPGS*DYRRAL Trigger: TAGTGCGCGCCTGTAGTCCCAGCTACCCGGGAGGCT...GTTAGGCCAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACAAGGGAGTCCTGTGTGTGCTGTCCATGAATTCCTaGAGTCCCAGCCAAGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: EDGQLELPLEFHKGVLCVLSMNS*SPSQVP Trigger: AGGCACTTGGCTGGGACTTCAGGAATTCATGGACAG...CACACACAGGACTCCCTTGTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCCATGGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGACTCCCGACCTCAAGTaGTCCTCCTGCCTGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: VPWEFCSRCSFQRDNATLTPDLK*SSCLSL Trigger: GAGGCTCAGGCAGGAGGATCACTTGAGGTCGGGAGT...CAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCCATGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACAAGGGAGTCCTGTGTGTGGAAGTCCCAGCCAAGTaGCTCTCAGCTCAAAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: EDGQLELPLEFHKGVLCVEVPAK*LSAQKA Trigger: GGCTTTTTGAGCTGAGAGGCACTTGGCTGGGACTTC...CACACACAGGACTCCCTTGTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGGCCTAACCTGAGCCTCCCAAAGTaGTGGGATTCCAGGCGTGAG | + |
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Preference number: 2 (lower is better) Translates to: GNSVLDVVSKEIMRPWPNLSLPK*WDSRRE Trigger: CTCACGCCTGGAATCCCAGCACTTTGGGAGGCTCAG...GTTAGGCCAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGACTACTTCATAGATGAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACCTCCATCCTTCCTTCTaGGCTGTTCTCCAGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: SDYFIDEDGQLELPLEFHLHPSF*AVLQQA Trigger: AGCCTGCTGGAGAACAGCTCAGAAGGAAGGATGGAG...GTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTCATCTATGAAGTAGTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCTAAATATATCCAGGTTCACAGCCATGCTGCTTGCATCCATGTATGTCAGACAGGCTGGAGTGCAGTaGCATGATGTCGGCTCACTA | + |
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Preference number: 2 (lower is better) Translates to: FLNISRFTAMLLASMYVRQAGVQ*HDVGSL Trigger: TAGTGAGCCGACATCATGTCACTGCACTCCAGCCTG...TCTGACATACATGGATGCAAGCAGCATGGCTGTGAACCTGGATATATTTAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCTAAATATATCCAGGTTCACAGCCATGCTGCTTGCATCCATGTATGTCAGAGCAAAAATCCACCGGTaGGTCAGCAAGCAGGGCACT | + |
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Preference number: 2 (lower is better) Translates to: FLNISRFTAMLLASMYVRAKIHR*VSKQGT Trigger: AGTGCCCTGCTTGCTGACGCACCGGTGGATTTTTGC...TCTGACATACATGGATGCAAGCAGCATGGCTGTGAACCTGGATATATTTAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGCCATGCTGCTTGCATCCATGTATGTCAGATTACCTATCTTTTTGCTACACTGAAAGAGGTCTGCTaGGCAGTAGGACTGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: HSHAACIHVCQITYLFATLKEVC*AVGLLL Trigger: CAGAAGCAGTCCTACTGCCCAGCAGACCTCTTTCAG...TGTAGCAAAAAGATAGGTAATCTGACATACATGGATGCAAGCAGCATGGCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR TCA 90 bp | AATCCTCTCTCCTTACATTGTACCCAATACCAGTGGTATATATCACCAGTGTATGACTGCTTCTGTGGATaGGAGGCCTCTTGTTGGACT | + |
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Preference number: 2 (lower is better) Translates to: NPLSLHCTQYQWYISPVYDCFCG*EASCWT Trigger: AGTCCAACAAGAGGCCTCTCATCCACAGAAGCAGTC...ATACACTGGTGATATATACCACTGGTATTGGGTACAATGTAAGGAGAGAGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCCATGGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGTTCCTGGCTGGAGAGTaGGACAAGAGAAACCACAAA | + |
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Preference number: 2 (lower is better) Translates to: VPWEFCSRCSFQRDNATLFLAGE*DKRNHK Trigger: TTTGTGGTTTCTCTTGTCTCACTCTCCAGCCAGGAA...CAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCCATGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGACTACTTCATAGATGAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACGTAGGACTGCTTCTGTaGATGAGAGGCCTCTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: SDYFIDEDGQLELPLEFHVGLLL*MRGLLL Trigger: CAACAAGAGGCCTCTCATCCACAGAAGCAGTCCTAC...GTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTCATCTATGAAGTAGTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR GCA 90 bp | TCCATGTATGTCAGATTACCTATCTTTTTGCTACATACCACGATGCAGTATCATGGGGTCTCGCTATATTaGCTGGGCTGGTCTGGAATT | + |
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Preference number: 2 (lower is better) Translates to: SMYVRLPIFLLHTTMQYHGVSLY*LGWSGI Trigger: AATTCCAGACCAGCCCAGGCAATATAGCGAGACCCC...ATGATACTGCATCGTGGTATGTAGCAAAAAGATAGGTAATCTGACATACATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCTAAATATATCCAGGTTCACAGCCATGCTGCTTGCATCCATGTATGTCAGACTCAAGCTATCCTCCTaGTTCTACTTCCCTAAATGC | + |
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Preference number: 2 (lower is better) Translates to: FLNISRFTAMLLASMYVRLKLSS*FYFPKC Trigger: GCATTTAGGGAAGTAGAAGCAGGAGGATAGCTTGAG...TCTGACATACATGGATGCAAGCAGCATGGCTGTGAACCTGGATATATTTAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGGCCTAACTTCAAAATGAATTTTTaGGCAGTTCTCCACGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: GNSVLDVVSKEIMRPWPNFKMNF*AVLHGN Trigger: GTTACCGTGGAGAACTGCTCAAAAATTCATTTTGAA...GTTAGGCCAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGGCCTAACATTTCTCCCTTTAAATaGGAAACTGGGATACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: GNSVLDVVSKEIMRPWPNISPFK*ETGIQV Trigger: CACTTGTATCCCAGTTTCTCATTTAAAGGGAGAAAT...GTTAGGCCAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR TCA 90 bp | AATCCTCTCTCCTTACATTGTACCCAATACCAGTGGTATATATCACCAGTGTATATGAGCCACCACTCCTaGCTCTCCTTGTTTACTTTT | + |
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Preference number: 2 (lower is better) Translates to: NPLSLHCTQYQWYISPVYMSHHS*LSLFTF Trigger: AAAAGTAAACAAGGAGAGTCAGGAGTGGTGGCTCAT...ATACACTGGTGATATATACCACTGGTATTGGGTACAATGTAAGGAGAGAGGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCCATGGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGCCTAACACTTTCATTTaGCAGAATAAACAGAGGACC | + |
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Preference number: 2 (lower is better) Translates to: VPWEFCSRCSFQRDNATLPNTFI*QNKQRT Trigger: GGTCCTCTGTTTATTCTGTCAAATGAAAGTGTTAGG...CAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCCATGGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR TCA 90 bp | AATCCTCTCTCCTTACATTGTACCCAATACCAGTGGTATATATCACCAGTGTATAAGGGGGACTACCAGTaGACTATTAAGAGTTCGTTC | + |
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Preference number: 2 (lower is better) Translates to: NPLSLHCTQYQWYISPVYKGDYQ*TIKSSF Trigger: GAACGAACTCTTAATAGTTCACTGGTAGTCCCCCTT...ATACACTGGTGATATATACCACTGGTATTGGGTACAATGTAAGGAGAGAGGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCCATGGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGAGGCCAATTCTACTCTaGATCCCAAAATACATAGTT | + |
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Preference number: 2 (lower is better) Translates to: VPWEFCSRCSFQRDNATLRPILL*IPKYIV Trigger: AACTATGTATTTTGGGATTCAGAGTAGAATTGGCCT...CAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCCATGGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCCATGGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGGCGCACTACTGTGCCTaGCTAATTTTTGTATTTTTA | + |
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Preference number: 2 (lower is better) Translates to: VPWEFCSRCSFQRDNATLAHYCA*LIFVFL Trigger: TAAAAATACAAAAATTAGTCAGGCACAGTAGTGCGC...CAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCCATGGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR GCA 90 bp | TCCATGTATGTCAGATTACCTATCTTTTTGCTACATACCACGATGCAGTATCATTACAGCTCAAACATATaGAGTATCTGCCAGCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: SMYVRLPIFLLHTTMQYHYSSNI*SICQPC Trigger: ACAGGGCTGGCAGATACTGCATATGTTTGAGCTGTA...ATGATACTGCATCGTGGTATGTAGCAAAAAGATAGGTAATCTGACATACATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTAAATATATCCAGGTTCACAGCCATGCTGCTTGCATCCATGTATGTCAGAACAAGTGGTTTGAGGTaGGGAAGAAATGATACATTT | + |
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Preference number: 2 (lower is better) Translates to: FLNISRFTAMLLASMYVRTSGLR*GRNDTF Trigger: AAATGTATCATTTCTTCCCCACCTCAAACCACTTGT...TCTGACATACATGGATGCAAGCAGCATGGCTGTGAACCTGGATATATTTAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR CCA 90 bp | AATCCTCTCTCCTTACATTGTACCCAATACCAGTGGTATATATCACCAGTGTATCACACACACTCATTTTaGGGTAAGAGATTTTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: NPLSLHCTQYQWYISPVYHTHSF*GKRFFL Trigger: TAGGAAAAATCTCTTACCCCAAAATGAGTGTGTGTG...ATACACTGGTGATATATACCACTGGTATTGGGTACAATGTAAGGAGAGAGGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR TCA 72 bp | GCAGGGCACTCGGCCATTCATCTCCATCCTTCCTTCTaGGCTGTTCTCCAGCAGGCTCCGGCCGCAGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: AGHSAIHLHPSF*AVLQQAPAAAP Trigger: TGGAGCTGCGGCCGGAGCCTGCTGGAGAACAGCTCAGAAGGAAGGATGGAGATGAATGGCCGAGTGCCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR CCA 72 bp | GTCAGCCATGTCTGGAAGGCTCTGAAAGAGGTCTGCTaGGCAGTAGGACTGCTTCTGTGGATGAGAGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: VSHVWKALKEVC*AVGLLLWMRGL Trigger: GAGGCCTCTCATCCACAGAAGCAGTCCTACTGCCCAGCAGACCTCTTTCAGAGCCTTCCAGACATGGCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR TCA 72 bp | CATATGCAGTATCTGCCAGCCCTGTCCATGAATTCCTaGAGTCCCAGCCAAGTGCCTCTCAGCTCAAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: HMQYLPALSMNS*SPSQVPLSSKS Trigger: GCTTTTTGAGCTGAGAGGCACTTGGCTGGGACTTCAGGAATTCATGGACAGGGCTGGCAGATACTGCATATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR CAA 90 bp | CACAGCCATGCTGCTTGCATCCATGTATGTCAGATTACCTATCTTTTTGCTACAATGAGAGGCCTCTTGTaGGACTGGAGAGACCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: HSHAACIHVCQITYLFATMRGLL*DWRDQE Trigger: CTCCTGGTCTCTCCAGTCCAACAAGAGGCCTCTCAT...TGTAGCAAAAAGATAGGTAATCTGACATACATGGATGCAAGCAGCATGGCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR CAA 90 bp | GGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGGCCTAACGCTGGTCTGGAATTCTaGGCCTCAAGCTATCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: GNSVLDVVSKEIMRPWPNAGLEF*ASSYPP Trigger: AGGAGGATAGCTTGAGGCCAAGAATTCCAGACCAGC...GTTAGGCCAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCTAAATATATCCAGGTTCACAGCCATGCTGCTTGCATCCATGTATGTCAGACCACCGTGCCCGGCCTaGTCCATAATTTTTAAACAC | + |
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Preference number: 3 (lower is better) Translates to: FLNISRFTAMLLASMYVRPPCPA*SIIFKH Trigger: GTGTTTAAAAATTATGGACAAGGCCGGGCACGGTGG...TCTGACATACATGGATGCAAGCAGCATGGCTGTGAACCTGGATATATTTAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| 3UTR GCA 72 bp | ATTTCTAAATATATCCAGGTTCACAGCCATGCTGCTTaGATCCATGTATGTCAGATTACCTATCTTTTTGCT | + |
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Preference number: 3 (lower is better) Translates to: ISKYIQVHSHAA*IHVCQITYLFA Trigger: AGCAAAAAGATAGGTAATCTGACATACATGGATGCAAGCAGCATGGCTGTGAACCTGGATATATTTAGAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR TCA 90 bp | TGCGTCAGCAAGCAGGGCACTCGGCCATTCATCTCCATCCTTCCTTCTGAGCTGACTCCTGACCTCAGGTaGTCCATCCGCCTCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: CVSKQGTRPFISILPSELTPDLR*SIRLGL Trigger: GAGGCCGAGGCGGATGGATCACCTGAGGTCAGGAGT...CAGCTCAGAAGGAAGGATGGAGATGAATGGCCGAGTGCCCTGCTTGCTGACGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR TCA 90 bp | TGCGTCAGCAAGCAGGGCACTCGGCCATTCATCTCCATCCTTCCTTCTGAGCTGGTGAACCGTGAGCTGTaGGCACGGAGGTTGCAGTCG | + |
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Preference number: 4 (lower is better) Translates to: CVSKQGTRPFISILPSELVNREL*ARRLQS Trigger: CGACTGCAACCTCCGTGCTCACAGCTCACGGTTCAC...CAGCTCAGAAGGAAGGATGGAGATGAATGGCCGAGTGCCCTGCTTGCTGACGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR TCA 90 bp | CTGCTGGGCAGTAGGACTGCTTCTGTGGATGAGAGGCCTCTTGTTGGACTGGAGGCCCCTGGATTCTGGTaGACCGTGAGCTGTGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: LLGSRTASVDERPLVGLEAPGFW*TVSCEH Trigger: GTGCTCACAGCTCACGGTTCACCAGAATCCAGGGGC...CTCCAGTCCAACAAGAGGCCTCTCATCCACAGAAGCAGTCCTACTGCCCAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR GCA 90 bp | CTGCTGGGCAGTAGGACTGCTTCTGTGGATGAGAGGCCTCTTGTTGGACTGGAGAGGCGTGAGCCACCGTaGCCGGCCTTGTCCATAATT | + |
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Preference number: 4 (lower is better) Translates to: LLGSRTASVDERPLVGLERREPP*PALSII Trigger: AATTATGGACAAGGCCGGGCACGGTGGCTCACGCCT...CTCCAGTCCAACAAGAGGCCTCTCATCCACAGAAGCAGTCCTACTGCCCAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR GCA 90 bp | CTGCTGGGCAGTAGGACTGCTTCTGTGGATGAGAGGCCTCTTGTTGGACTGGAGCTGAGCCTCCCAAAGTaGTGGGATTCCAGGCGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LLGSRTASVDERPLVGLELSLPK*WDSRRE Trigger: CTCACGCCTGGAATCCCAGCACTTTGGGAGGCTCAG...CTCCAGTCCAACAAGAGGCCTCTCATCCACAGAAGCAGTCCTACTGCCCAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR TCA 90 bp | TGCGTCAGCAAGCAGGGCACTCGGCCATTCATCTCCATCCTTCCTTCTGAGCTGCTGTCCATGAATTCCTaGAGTCCCAGCCAAGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: CVSKQGTRPFISILPSELLSMNS*SPSQVP Trigger: AGGCACTTGGCTGGGACTTCAGGAATTCATGGACAG...CAGCTCAGAAGGAAGGATGGAGATGAATGGCCGAGTGCCCTGCTTGCTGACGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR GCA 90 bp | TGCGTCAGCAAGCAGGGCACTCGGCCATTCATCTCCATCCTTCCTTCTGAGCTGTGTGAGCACGGAGGTTaGAGTCGGTGGAGAGAAATG | + |
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Preference number: 4 (lower is better) Translates to: CVSKQGTRPFISILPSELCEHGG*SRWREM Trigger: CATTTCTCTCCACCGACTGCAACCTCCGTGCTCACA...CAGCTCAGAAGGAAGGATGGAGATGAATGGCCGAGTGCCCTGCTTGCTGACGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR TCA 90 bp | CTGCTGGGCAGTAGGACTGCTTCTGTGGATGAGAGGCCTCTTGTTGGACTGGAGAAGAGTGAATCCTCCTaGCTGCCTTCTTCGCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LLGSRTASVDERPLVGLEKSESS*LPSSRF Trigger: GAAACGCGAAGAAGGCAGTCAGGAGGATTCACTCTT...CTCCAGTCCAACAAGAGGCCTCTCATCCACAGAAGCAGTCCTACTGCCCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR CCA 90 bp | CTGCTGGGCAGTAGGACTGCTTCTGTGGATGAGAGGCCTCTTGTTGGACTGGAGCAGAAAAATCATGGTTaGGTATTGGGTGGGCCATTG | + |
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Preference number: 4 (lower is better) Translates to: LLGSRTASVDERPLVGLEQKNHG*VLGGPL Trigger: CAATGGCCCACCCAATACCCAACCATGATTTTTCTG...CTCCAGTCCAACAAGAGGCCTCTCATCCACAGAAGCAGTCCTACTGCCCAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR TCA 90 bp | GAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACAAGGGAGTCCTGTGTGTGGATTCTGGTGAACCGTaGGCTGTGAGCACGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: EDGQLELPLEFHKGVLCVDSGEP*AVSTEV Trigger: AACCTCCGTGCTCACAGCTCACGGTTCACCAGAATC...CACACACAGGACTCCCTTGTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR CCA 90 bp | GGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGGCCTAACGGCCGACCAAGCCCCTaGATTCTGGTGAACCGTGAG | + |
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Preference number: 4 (lower is better) Translates to: GNSVLDVVSKEIMRPWPNGRPSP*ILVNRE Trigger: CTCACGGTTCACCAGAATCCAGGGGCTTGGTCGGCC...GTTAGGCCAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR CCA 90 bp | GTTCCATGGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGAGCCTCCCGGGTAGCTaGGACTACAGGCGCGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: VPWEFCSRCSFQRDNATLSLPGS*DYRRAL Trigger: TAGTGCGCGCCTGTAGTCCCAGCTACCCGGGAGGCT...CAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCCATGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR GCA 90 bp | GAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACAAGGGAGTCCTGTGTGTGGGGGTCTCGCTATATTaGCTGGGCTGGTCTGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: EDGQLELPLEFHKGVLCVGVSLY*LGWSGI Trigger: AATTCCAGACCAGCCCAGGCAATATAGCGAGACCCC...CACACACAGGACTCCCTTGTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGGCAGTAGGACTGCTTCTGTGGATGAGAGGCCTCTTGTTGGACTGGAGTTCAAAATGAATTTTTaGGCAGTTCTCCACGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLGSRTASVDERPLVGLEFKMNF*AVLHGN Trigger: GTTACCGTGGAGAACTGCTCAAAAATTCATTTTGAA...CTCCAGTCCAACAAGAGGCCTCTCATCCACAGAAGCAGTCCTACTGCCCAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR GCA 90 bp | GAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACAAGGGAGTCCTGTGTGTGGTGAATCCTCCTGACTaGCTTCTTCGCGTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EDGQLELPLEFHKGVLCVVNPPD*LLRVSS Trigger: AGAGGAAACGCGAAGAAGGCAGTCAGGAGGATTCAC...CACACACAGGACTCCCTTGTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCATGGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGGGCCTCTTGTTGGACTaGAGAGACCAGGAGCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VPWEFCSRCSFQRDNATLGLLLD*RDQEPR Trigger: TCTCGGCTCCTGGTCTCTCCAGTCCAACAAGAGGCC...CAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCCATGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCATGGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGCACAAAGCCTGGGGGTaGATAGCCAAGGAGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPWEFCSRCSFQRDNATLHKAWG*IAKEMP Trigger: TGGCATCTCCTTGGCTATCCACCCCCAGGCTTTGTG...CAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCCATGGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR TCA 90 bp | CACAGCCATGCTGCTTGCATCCATGTATGTCAGATTACCTATCTTTTTGCTACAGACTGCTTCTGTGGATaGGAGGCCTCTTGTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: HSHAACIHVCQITYLFATDCFCG*EASCWT Trigger: AGTCCAACAAGAGGCCTCTCATCCACAGAAGCAGTC...TGTAGCAAAAAGATAGGTAATCTGACATACATGGATGCAAGCAGCATGGCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR TCA 90 bp | AGTGACTACTTCATAGATGAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACCAGGCTGGAGTGCAGTaGCATGATGTCGGCTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: SDYFIDEDGQLELPLEFHQAGVQ*HDVGSL Trigger: TAGTGAGCCGACATCATGTCACTGCACTCCAGCCTG...GTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTCATCTATGAAGTAGTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR TCA 90 bp | TCCATGTATGTCAGATTACCTATCTTTTTGCTACATACCACGATGCAGTATCATACTCCCGACCTCAAGTaGTCCTCCTGCCTGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SMYVRLPIFLLHTTMQYHTPDLK*SSCLSL Trigger: GAGGCTCAGGCAGGAGGATCACTTGAGGTCGGGAGT...ATGATACTGCATCGTGGTATGTAGCAAAAAGATAGGTAATCTGACATACATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CCA 90 bp | CACAGCCATGCTGCTTGCATCCATGTATGTCAGATTACCTATCTTTTTGCTACAACCAATCACAAAGCCTaGGGGTGGATAGCCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HSHAACIHVCQITYLFATTNHKA*GWIAKE Trigger: CTCCTTGGCTATCCACCCCCAGGCTTTGTGATTGGT...TGTAGCAAAAAGATAGGTAATCTGACATACATGGATGCAAGCAGCATGGCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCATGGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGCTGAAAGAGGTCTGCTaGGCAGTAGGACTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPWEFCSRCSFQRDNATLLKEVC*AVGLLL Trigger: CAGAAGCAGTCCTACTGCCCAGCAGACCTCTTTCAG...CAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCCATGGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR GCA 90 bp | AATCCTCTCTCCTTACATTGTACCCAATACCAGTGGTATATATCACCAGTGTATGCAAAAATCCACCGGTaGGTCAGCAAGCAGGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: NPLSLHCTQYQWYISPVYAKIHR*VSKQGT Trigger: AGTGCCCTGCTTGCTGACGCACCGGTGGATTTTTGC...ATACACTGGTGATATATACCACTGGTATTGGGTACAATGTAAGGAGAGAGGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTAAATATATCCAGGTTCACAGCCATGCTGCTTGCATCCATGTATGTCAGAGCTCTGAAAGAGGTCTaGTGGGCAGTAGGACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLNISRFTAMLLASMYVRALKEV*WAVGLL Trigger: AAGCAGTCCTACTGCCCAGCAGACCTCTTTCAGAGC...TCTGACATACATGGATGCAAGCAGCATGGCTGTGAACCTGGATATATTTAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR GCA 90 bp | AGTGACTACTTCATAGATGAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACGAAGTCCCAGCCAAGTaGCTCTCAGCTCAAAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SDYFIDEDGQLELPLEFHEVPAK*LSAQKA Trigger: GGCTTTTTGAGCTGAGAGGCACTTGGCTGGGACTTC...GTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTCATCTATGAAGTAGTCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR GCA 90 bp | GTTCCATGGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGCCAGGTTCACAGCCATaGTGCTTGCATCCATGTATG | + |
|
Preference number: 4 (lower is better) Translates to: VPWEFCSRCSFQRDNATLPGSQP*CLHPCM Trigger: CATACATGGATGCAAGCAGCATGGCTGTGAACCTGG...CAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCCATGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR TCA 90 bp | TCCATGTATGTCAGATTACCTATCTTTTTGCTACATACCACGATGCAGTATCATCTCCATCCTTCCTTCTaGGCTGTTCTCCAGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SMYVRLPIFLLHTTMQYHLHPSF*AVLQQA Trigger: AGCCTGCTGGAGAACAGCTCAGAAGGAAGGATGGAG...ATGATACTGCATCGTGGTATGTAGCAAAAAGATAGGTAATCTGACATACATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR TCA 90 bp | GAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACAAGGGAGTCCTGTGTGTGTATGTGAATACAGACTaGGAAGCCTTGATGTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: EDGQLELPLEFHKGVLCVYVNTD*EALMSQ Trigger: TTGTGACATCAAGGCTTCTCAGTCTGTATTCACATA...CACACACAGGACTCCCTTGTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCATGGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGATCATGGTTGGGTATTaGGTGGGCCATTGGCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: VPWEFCSRCSFQRDNATLIMVGY*VGHWQL Trigger: AAGTTGCCAATGGCCCACCCAATACCCAACCATGAT...CAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCCATGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CCA 90 bp | GGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGGCCTAACCCCTTTGTATCTAAATaGAGCCTGCATGCTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GNSVLDVVSKEIMRPWPNPFVSK*SLHALD Trigger: ATCCAGAGCATGCAGGCTCCATTTAGATACAAAGGG...GTTAGGCCAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTAAATATATCCAGGTTCACAGCCATGCTGCTTGCATCCATGTATGTCAGAGTAGGACTGCTTCTGTaGATGAGAGGCCTCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLNISRFTAMLLASMYVRVGLLL*MRGLLL Trigger: CAACAAGAGGCCTCTCATCCACAGAAGCAGTCCTAC...TCTGACATACATGGATGCAAGCAGCATGGCTGTGAACCTGGATATATTTAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTAAATATATCCAGGTTCACAGCCATGCTGCTTGCATCCATGTATGTCAGACTGGTCTGGAATTCTTaGCCTCAAGCTATCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLNISRFTAMLLASMYVRLVWNS*PQAILL Trigger: CAGGAGGATAGCTTGAGGCCAAGAATTCCAGACCAG...TCTGACATACATGGATGCAAGCAGCATGGCTGTGAACCTGGATATATTTAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR TCA 90 bp | GAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACAAGGGAGTCCTGTGTGTGAGGCCAATTCTACTCTaGATCCCAAAATACATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: EDGQLELPLEFHKGVLCVRPILL*IPKYIV Trigger: AACTATGTATTTTGGGATTCAGAGTAGAATTGGCCT...CACACACAGGACTCCCTTGTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR GCA 90 bp | CACAGCCATGCTGCTTGCATCCATGTATGTCAGATTACCTATCTTTTTGCTACATACAGCTCAAACATATaGAGTATCTGCCAGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSHAACIHVCQITYLFATYSSNI*SICQPC Trigger: ACAGGGCTGGCAGATACTGCATATGTTTGAGCTGTA...TGTAGCAAAAAGATAGGTAATCTGACATACATGGATGCAAGCAGCATGGCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CCA 90 bp | CACAGCCATGCTGCTTGCATCCATGTATGTCAGATTACCTATCTTTTTGCTACATATTGGGTGGGCCATTaGCAACTTCTAAAGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: HSHAACIHVCQITYLFATYWVGH*QLLKVT Trigger: TGTGACCTTTAGAAGTTGCCAATGGCCCACCCAATA...TGTAGCAAAAAGATAGGTAATCTGACATACATGGATGCAAGCAGCATGGCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCATGGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGCAAGTTCTTCCTGGCTaGAGAGTGAGACAAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VPWEFCSRCSFQRDNATLQVLPG*RVRQEK Trigger: TTTCTCTTGTCTCACTCTCCAGCCAGGAAGAACTTG...CAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCCATGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CCA 90 bp | GGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGGCCTAACGTAGAGCTGCTGTCTTaGCTTGAAGACGGAAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: GNSVLDVVSKEIMRPWPNVELLS*LEDGNY Trigger: ATAATTTCCGTCTTCAAGCCAAGACAGCAGCTCTAC...GTTAGGCCAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR TCA 90 bp | GGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGGCCTAACCCTAACACTTTCATTTaGCAGAATAAACAGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: GNSVLDVVSKEIMRPWPNPNTFI*QNKQRT Trigger: GGTCCTCTGTTTATTCTGTCAAATGAAAGTGTTAGG...GTTAGGCCAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR TCA 90 bp | AGTGACTACTTCATAGATGAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACAAGGGGGACTACCAGTaGACTATTAAGAGTTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDYFIDEDGQLELPLEFHKGDYQ*TIKSSF Trigger: GAACGAACTCTTAATAGTTCACTGGTAGTCCCCCTT...GTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTCATCTATGAAGTAGTCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR GCA 90 bp | AGTGACTACTTCATAGATGAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACCACAGCCATGCTGCTTaGATCCATGTATGTCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SDYFIDEDGQLELPLEFHHSHAA*IHVCQI Trigger: AATCTGACATACATGGATGCAAGCAGCATGGCTGTG...GTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTCATCTATGAAGTAGTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CCA 90 bp | AATCCTCTCTCCTTACATTGTACCCAATACCAGTGGTATATATCACCAGTGTATTCTCGCTATATTGCCTaGGCTGGTCTGGAATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NPLSLHCTQYQWYISPVYSRYIA*AGLEFL Trigger: CAAGAATTCCAGACCAGCCCAGGCAATATAGCGAGA...ATACACTGGTGATATATACCACTGGTATTGGGTACAATGTAAGGAGAGAGGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CCA 90 bp | GGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGGCCTAACCACACACACTCATTTTaGGGTAAGAGATTTTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GNSVLDVVSKEIMRPWPNHTHSF*GKRFFL Trigger: TAGGAAAAATCTCTTACCCCAAAATGAGTGTGTGTG...GTTAGGCCAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCAGATTACCTATCTTTTTGCTACATACCACGATGCAGTATCATACTTGTTTTCCTGGCTGGAGAGTaGGACAAGAGAAACCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: MSDYLSFCYIPRCSIILVFLAGE*DKRNHK Trigger: TTTGTGGTTTCTCTTGTCTCACTCTCCAGCCAGGAA...AACAAGTATGATACTGCATCGTGGTATGTAGCAAAAAGATAGGTAATCTGACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR TCA 90 bp | GTTCCATGGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGATTTCTCCCTTTAAATaGGAAACTGGGATACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VPWEFCSRCSFQRDNATLISPFK*ETGIQV Trigger: CACTTGTATCCCAGTTTCTCATTTAAAGGGAGAAAT...CAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCCATGGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCATGGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGAGACCAGAGCAAGCTTaGTTAGACTATACTTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VPWEFCSRCSFQRDNATLRPEQA*LDYTLK Trigger: CTTTAAAGTATAGTCTAACCAAGCTTGCTCTGGTCT...CAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCCATGGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCAGATTACCTATCTTTTTGCTACATACCACGATGCAGTATCATACTTGTTATGAGCCACCACTCCTaGCTCTCCTTGTTTACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MSDYLSFCYIPRCSIILVMSHHS*LSLFTF Trigger: AAAAGTAAACAAGGAGAGTCAGGAGTGGTGGCTCAT...AACAAGTATGATACTGCATCGTGGTATGTAGCAAAAAGATAGGTAATCTGACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCAGATTACCTATCTTTTTGCTACATACCACGATGCAGTATCATACTTGTTCTCAAGCTATCCTCCTaGTTCTACTTCCCTAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: MSDYLSFCYIPRCSIILVLKLSS*FYFPKC Trigger: GCATTTAGGGAAGTAGAAGCAGGAGGATAGCTTGAG...AACAAGTATGATACTGCATCGTGGTATGTAGCAAAAAGATAGGTAATCTGACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTAAATATATCCAGGTTCACAGCCATGCTGCTTGCATCCATGTATGTCAGATGCTACATACCACGATaGAGTATCATACTTGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLNISRFTAMLLASMYVRCYIPR*SIILVN Trigger: ATTAACAAGTATGATACTGCATCGTGGTATGTAGCA...TCTGACATACATGGATGCAAGCAGCATGGCTGTGAACCTGGATATATTTAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR GCA 90 bp | AATCCTCTCTCCTTACATTGTACCCAATACCAGTGGTATATATCACCAGTGTATGATTACCTATCTTTTTaGTACATACCACGATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NPLSLHCTQYQWYISPVYDYLSF*YIPRCS Trigger: ACTGCATCGTGGTATGTAGCAAAAAGATAGGTAATC...ATACACTGGTGATATATACCACTGGTATTGGGTACAATGTAAGGAGAGAGGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CCA 90 bp | TCCATGTATGTCAGATTACCTATCTTTTTGCTACATACCACGATGCAGTATCATTGTACCCAATACCAGTaGTATATATCACCAGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SMYVRLPIFLLHTTMQYHCTQYQ*YISPVY Trigger: ATACACTGGTGATATATACCACTGGTATTGGGTACA...ATGATACTGCATCGTGGTATGTAGCAAAAAGATAGGTAATCTGACATACATGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS TCA 90 bp | TTCCTAGGCCGACCAAGCCCCTGGATTCTGGTGAACCGTGAGCTGTaGGCACGGAGGTTGCAGTCGGTGGAGAGAAATGGCTCCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FLGRPSPWILVNREL*ARRLQSVERNGSPS Trigger: TGAAGGGGAGCCATTTCTCTCCACCGACTGCAACCTCCGTGCTCACAGCTCACGGTTCACCAGAATCCAGGGGCTTGGTCGGCCTAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS TCA 90 bp | TTGTGGATTCCTAGGCCGACCAAGCCCCTGGATTCTGGTGAACCGTaGGCTGTGAGCACGGAGGTTGCAGTCGGTGGAGAGAAATGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LWIPRPTKPLDSGEP*AVSTEVAVGGEKWL Trigger: GAGCCATTTCTCTCCACCGACTGCAACCTCCGTGCTCACAGCTCACGGTTCACCAGAATCCAGGGGCTTGGTCGGCCTAGGAATCCACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS TCA 90 bp | GGAGGAGATAGGATCCTACCCAGCTCCCCCAAGAGTGAATCCTCCTaGCTGCCTTCTTCGCGTTTCCTCTCACACACCTCGGGCAGATTA | + |
|
Preference number: 5 (lower is better) Translates to: GGDRILPSSPKSESS*LPSSRFLSHTSGRL Trigger: TAATCTGCCCGAGGTGTGTGAGAGGAAACGCGAAGAAGGCAGTCAGGAGGATTCACTCTTGGGGGAGCTGGGTAGGATCCTATCTCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS GCA 90 bp | GAGATAGGATCCTACCCAGCTCCCCCAAGAGTGAATCCTCCTGACTaGCTTCTTCGCGTTTCCTCTCACACACCTCGGGCAGATTATCTC | + |
|
Preference number: 5 (lower is better) Translates to: EIGSYPAPPRVNPPD*LLRVSSHTPRADYL Trigger: GAGATAATCTGCCCGAGGTGTGTGAGAGGAAACGCGAAGAAGGCAGTCAGGAGGATTCACTCTTGGGGGAGCTGGGTAGGATCCTATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CAA 90 bp | TGCGTCAGCAAGCAGGGCACTCGGCCATTCATCTCCATCCTTCCTTCTGAGCTGAATCATGGTTGGGTATaGGGTGGGCCATTGGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: CVSKQGTRPFISILPSELNHGWV*GGPLAT Trigger: AGTTGCCAATGGCCCACCCAATACCCAACCATGATT...CAGCTCAGAAGGAAGGATGGAGATGAATGGCCGAGTGCCCTGCTTGCTGACGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CAA 90 bp | TGCGTCAGCAAGCAGGGCACTCGGCCATTCATCTCCATCCTTCCTTCTGAGCTGCCACCGTGCCCGGCCTaGTCCATAATTTTTAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: CVSKQGTRPFISILPSELPPCPA*SIIFKH Trigger: GTGTTTAAAAATTATGGACAAGGCCGGGCACGGTGG...CAGCTCAGAAGGAAGGATGGAGATGAATGGCCGAGTGCCCTGCTTGCTGACGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
||
| CDS-3UTR CAA 90 bp | GAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACAAGGGAGTCCTGTGTGTGGGGGGTCTCGCTATATaGCCTGGGCTGGTCTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: EDGQLELPLEFHKGVLCVGGLAI*PGLVWN Trigger: ATTCCAGACCAGCCCAGGCAATATAGCGAGACCCCC...CACACACAGGACTCCCTTGTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR CAA 90 bp | CTGCTGGGCAGTAGGACTGCTTCTGTGGATGAGAGGCCTCTTGTTGGACTGGAGTCCTCTCTCCTTACATaGTACCCAATACCAGTGGTA | + |
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Preference number: 5 (lower is better) Translates to: LLGSRTASVDERPLVGLESSLLT*YPIPVV Trigger: TACCACTGGTATTGGGTACAATGTAAGGAGAGAGGA...CTCCAGTCCAACAAGAGGCCTCTCATCCACAGAAGCAGTCCTACTGCCCAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR CAA 90 bp | GAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACAAGGGAGTCCTGTGTGTGATGAGAGGCCTCTTGTaGGACTGGAGAGACCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: EDGQLELPLEFHKGVLCVMRGLL*DWRDQE Trigger: CTCCTGGTCTCTCCAGTCCAACAAGAGGCCTCTCAT...CACACACAGGACTCCCTTGTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR CAA 90 bp | TGCGTCAGCAAGCAGGGCACTCGGCCATTCATCTCCATCCTTCCTTCTGAGCTGAAGACCAGAGCAAGCTaGGTTAGACTATACTTTAAA | + |
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Preference number: 5 (lower is better) Translates to: CVSKQGTRPFISILPSELKTRAS*VRLYFK Trigger: TTTAAAGTATAGTCTAACCAAGCTTGCTCTGGTCTT...CAGCTCAGAAGGAAGGATGGAGATGAATGGCCGAGTGCCCTGCTTGCTGACGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS CCA 90 bp | TTCCTCTCACACACCTCGGGCAGATTATCTCAGAAAAATCATGGTTaGGTATTGGGTGGGCCATTGGCAACTTCTAAAGGTCACATTATG | + |
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Preference number: 5 (lower is better) Translates to: FLSHTSGRLSQKNHG*VLGGPLATSKGHIM Trigger: CATAATGTGACCTTTAGAAGTTGCCAATGGCCCACCCAATACCCAACCATGATTTTTCTGAGATAATCTGCCCGAGGTGTGTGAGAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR CAA 90 bp | AGTGACTACTTCATAGATGAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACCCCAATCCCACCCCTTaGTATCTAAATGGAGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SDYFIDEDGQLELPLEFHPNPTP*YLNGAC Trigger: GCAGGCTCCATTTAGATACAAAGGGGTGGGATTGGG...GTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTCATCTATGAAGTAGTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR CAA 90 bp | GGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGGCCTAACTCAGAAAAATCATGGTaGGGTATTGGGTGGGCCATT | + |
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Preference number: 5 (lower is better) Translates to: GNSVLDVVSKEIMRPWPNSEKSW*GIGWAI Trigger: AATGGCCCACCCAATACCCAACCATGATTTTTCTGA...GTTAGGCCAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR CAA 90 bp | AATCCTCTCTCCTTACATTGTACCCAATACCAGTGGTATATATCACCAGTGTATGTATTGGGTGGGCCATaGGCAACTTCTAAAGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: NPLSLHCTQYQWYISPVYVLGGP*ATSKGH Trigger: GTGACCTTTAGAAGTTGCCAATGGCCCACCCAATAC...ATACACTGGTGATATATACCACTGGTATTGGGTACAATGTAAGGAGAGAGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR CAA 90 bp | TCCATGTATGTCAGATTACCTATCTTTTTGCTACATACCACGATGCAGTATCATGCTGGTCTGGAATTCTaGGCCTCAAGCTATCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SMYVRLPIFLLHTTMQYHAGLEF*ASSYPP Trigger: AGGAGGATAGCTTGAGGCCAAGAATTCCAGACCAGC...ATGATACTGCATCGTGGTATGTAGCAAAAAGATAGGTAATCTGACATACATGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR CAA 90 bp | AGTGACTACTTCATAGATGAAGATGGACAACTTGAACTTCCCCTTGAGTTTCACTCACAGCCATGCTGCTaGCATCCATGTATGTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: SDYFIDEDGQLELPLEFHSQPCC*HPCMSD Trigger: ATCTGACATACATGGATGCAAGCAGCATGGCTGTGA...GTGAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTCATCTATGAAGTAGTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR CAA 90 bp | AATCCTCTCTCCTTACATTGTACCCAATACCAGTGGTATATATCACCAGTGTATAACTTGAACTTCCCCTaGAGTTTCACAAGGGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: NPLSLHCTQYQWYISPVYNLNFP*SFTRES Trigger: GGACTCCCTTGTGAAACTCAAGGGGAAGTTCAAGTT...ATACACTGGTGATATATACCACTGGTATTGGGTACAATGTAAGGAGAGAGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR CAA 90 bp | GTTCCATGGGAATTCTGTTCTCGATGTAGTTTCCAAAGAGATAATGCGACCTTGAGATTACCTATCTTTTaGCTACATACCACGATGCAG | + |
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Preference number: 5 (lower is better) Translates to: VPWEFCSRCSFQRDNATLRLPIF*LHTTMQ Trigger: CTGCATCGTGGTATGTAGCAAAAAGATAGGTAATCT...CAAGGTCGCATTATCTCTTTGGAAACTACATCGAGAACAGAATTCCCATGGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR CAA 90 bp | AATCCTCTCTCCTTACATTGTACCCAATACCAGTGGTATATATCACCAGTGTATATGAAGATGGACAACTaGAACTTCCCCTTGAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: NPLSLHCTQYQWYISPVYMKMDN*NFPLSF Trigger: GAAACTCAAGGGGAAGTTCAAGTTGTCCATCTTCAT...ATACACTGGTGATATATACCACTGGTATTGGGTACAATGTAAGGAGAGAGGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR CAA 90 bp | ATGTCAGATTACCTATCTTTTTGCTACATACCACGATGCAGTATCATACTTGTTATAAACACCCCAGATTaGCAGGCCAATTCTACTCTG | + |
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Preference number: 5 (lower is better) Translates to: MSDYLSFCYIPRCSIILVINTPD*QANSTL Trigger: CAGAGTAGAATTGGCCTGCAAATCTGGGGTGTTTAT...AACAAGTATGATACTGCATCGTGGTATGTAGCAAAAAGATAGGTAATCTGACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR CAA 90 bp | TCCATGTATGTCAGATTACCTATCTTTTTGCTACATACCACGATGCAGTATCATAGCTGCTGTCTTGGCTaGAAGACGGAAATTATAGTT | + |
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Preference number: 5 (lower is better) Translates to: SMYVRLPIFLLHTTMQYHSCCLG*KTEIIV Trigger: AACTATAATTTCCGTCTTCAAGCCAAGACAGCAGCT...ATGATACTGCATCGTGGTATGTAGCAAAAAGATAGGTAATCTGACATACATGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS-3UTR CAA 90 bp | AATCCTCTCTCCTTACATTGTACCCAATACCAGTGGTATATATCACCAGTGTATATAACTAACTCTAATTaGGACCCCTCCAAAATACTG | + |
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Preference number: 5 (lower is better) Translates to: NPLSLHCTQYQWYISPVYITNSN*DPSKIL Trigger: CAGTATTTTGGAGGGGTCCAAATTAGAGTTAGTTAT...ATACACTGGTGATATATACCACTGGTATTGGGTACAATGTAAGGAGAGAGGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS TCA 72 bp | CCTAGGCCGACCAAGCCCCTGGATTCTGGTGAACCGTaGGCTGTGAGCACGGAGGTTGCAGTCGGTGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: PRPTKPLDSGEP*AVSTEVAVGGE Trigger: CTCTCCACCGACTGCAACCTCCGTGCTCACAGCTCACGGTTCACCAGAATCCAGGGGCTTGGTCGGCCTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS TCA 72 bp | CGACCAAGCCCCTGGATTCTGGTGAACCGTGAGCTGTaGGCACGGAGGTTGCAGTCGGTGGAGAGAAATGGC | + |
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Preference number: 6 (lower is better) Translates to: RPSPWILVNREL*ARRLQSVERNG Trigger: GCCATTTCTCTCCACCGACTGCAACCTCCGTGCTCACAGCTCACGGTTCACCAGAATCCAGGGGCTTGGTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS GCA 72 bp | TCCTACCCAGCTCCCCCAAGAGTGAATCCTCCTGACTaGCTTCTTCGCGTTTCCTCTCACACACCTCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: SYPAPPRVNPPD*LLRVSSHTPRA Trigger: TGCCCGAGGTGTGTGAGAGGAAACGCGAAGAAGGCAGTCAGGAGGATTCACTCTTGGGGGAGCTGGGTAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS TCA 72 bp | AGGATCCTACCCAGCTCCCCCAAGAGTGAATCCTCCTaGCTGCCTTCTTCGCGTTTCCTCTCACACACCTCG | + |
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Preference number: 6 (lower is better) Translates to: RILPSSPKSESS*LPSSRFLSHTS Trigger: CGAGGTGTGTGAGAGGAAACGCGAAGAAGGCAGTCAGGAGGATTCACTCTTGGGGGAGCTGGGTAGGATCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS CCA 72 bp | TCCCCAGGAACCCAATCCCACCCCTTTGTATCTAAATaGAGCCTGCATGCTCTGGATGTAGGAGGAGATAGG | + |
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Preference number: 6 (lower is better) Translates to: SPGTQSHPFVSK*SLHALDVGGDR Trigger: CCTATCTCCTCCTACATCCAGAGCATGCAGGCTCCATTTAGATACAAAGGGGTGGGATTGGGTTCCTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS CCA 72 bp | CACACCTCGGGCAGATTATCTCAGAAAAATCATGGTTaGGTATTGGGTGGGCCATTGGCAACTTCTAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: HTSGRLSQKNHG*VLGGPLATSKG Trigger: ACCTTTAGAAGTTGCCAATGGCCCACCCAATACCCAACCATGATTTTTCTGAGATAATCTGCCCGAGGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS CCA 72 bp | CTCAGAAAAATCATGGTTGGGTATTGGGTGGGCCATTaGCAACTTCTAAAGGTCACATTATGGGGAGACACA | + |
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Preference number: 6 (lower is better) Translates to: LRKIMVGYWVGH*QLLKVTLWGDT Trigger: TGTGTCTCCCCATAATGTGACCTTTAGAAGTTGCCAATGGCCCACCCAATACCCAACCATGATTTTTCTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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| CDS CAA 72 bp | TCTCAGAAAAATCATGGTTGGGTATTGGGTGGGCCATaGGCAACTTCTAAAGGTCACATTATGGGGAGACAC | + |
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Preference number: 6 (lower is better) Translates to: SQKNHGWVLGGP*ATSKGHIMGRH Trigger: GTGTCTCCCCATAATGTGACCTTTAGAAGTTGCCAATGGCCCACCCAATACCCAACCATGATTTTTCTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583195.2 |
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